------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 15 sequences from file D_ALA_DEHYDRATASE PATTERN CONSERVATION: CM: min Nr of Seqs to Match 15 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 50 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename D_ALA_DEHYDRATASE.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: HEM2_BACSU 324 HEM2_BRAJA 353 HEM2_ECOLI 323 HEM2_HUMAN 330 HEM2_METSC 320 HEM2_MOUSE 330 HEM2_MYCLE 329 HEM2_PEA 398 HEM2_RAT 330 HEM2_RHOCA 332 HEM2_SELMA 417 HEM2_SOYBN 412 HEM2_SPIOL 433 HEM2_SYNP7 326 HEM2_YEAST 342 Pratt run started at Thu Feb 6 19:25:25 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 29.1904 15( 15) D-x(3)-G-A-D-x(4)-K-P-x(3)-Y 2: 28.1904 15( 15) P-x(1,2)-A-x(0,1)-Y-x-V-S-x-E-x(2)-M 3: 28.1904 15( 15) P-x(3)-Y-x-V-S-x-E-x(2)-M-x(2,4)-A 4: 28.1904 20( 15) E-x(0,2)-G-A-D-x(4)-K-P-x(3)-Y 5: 28.1904 17( 15) D-x(1,3)-G-A-D-x(4)-K-P-x(3)-Y 6: 28.1904 15( 15) Y-x(2)-K-x(1,2)-S-x(2,3)-Y-x-P-F-R 7: 28.1904 15( 15) A-x(2)-G-x(5)-P-S-x(1,2)-M-x(0,1)-D-G 8: 27.6904 21( 15) A-x(0,1)-Y-x-V-S-x-E-x(2)-M-x(2,4)-A 9: 27.6904 24( 15) A-x(1,2)-A-x(0,2)-G-x(5)-P-S-x(3)-D-G 10: 27.6904 26( 15) A-x(0,1)-A-x(0,2)-G-x(5)-P-S-x(3)-D-G 11: 24.5203 15( 15) K-x(5)-Y-x-P-F-R-x(4,5)-S 12: 24.0203 15( 15) Y-x-V-S-x-E-x(2)-M-x(2,4)-A 13: 24.0203 17( 15) S-x(2,3)-Y-x-P-F-R-x(4,5)-S 14: 24.0203 15( 15) G-x(5)-P-S-x(1,2)-M-x(0,1)-D-G 15: 23.5203 22( 15) S-x(1,3)-Y-x-P-F-R-x(4,5)-S 16: 23.5203 24( 15) A-x-A-x(0,2)-G-x(5)-P-S-x(1,2)-M 17: 23.0203 21( 15) A-x(1,3)-S-x(1,3)-Y-x-P-F-R 18: 20.8503 15( 15) A-D-x(4)-K-P-x(3)-Y 19: 20.3503 15( 15) Y-x-P-F-R-x(4,5)-S 20: 19.8503 15( 15) V-S-x-E-x(2)-M-x(2,4)-A Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 78.5061 15( 15) D-x(2)-[EQ]-G-A-D-x-[ILV]-[ILM]-[IV]-K-P-[AGS]-x(2)-Y-[LM]-[DH]-[IMV]-[IMV]-x(2)-[AILV]-x-[DEGN]-x(4)-[LP]-x(2)-[AC]-x(3)-[SV]-[GS]-[DEG]-x(3)-[ILMV] B 2: 74.3241 20( 15) E-x(0,2)-G-A-D-x-[ILV]-[ILM]-[IV]-K-P-[AGS]-x(2)-Y-[LM]-[DH]-[IMV]-[IMV]-x(2)-[AILV]-x-[DEGN]-x(4)-[LP]-x(2)-[AC]-x(3)-[SV]-[GS]-[DEG]-x(3)-[ILMV] C 3: 74.3241 17( 15) D-x(1,3)-G-A-D-x-[ILV]-[ILM]-[IV]-K-P-[AGS]-x(2)-Y-[LM]-[DH]-[IMV]-[IMV]-x(2)-[AILV]-x-[DEGN]-x(4)-[LP]-x(2)-[AC]-x(3)-[SV]-[GS]-[DEG]-x(3)-[ILMV] D 4: 66.9840 15( 15) A-D-x-[ILV]-[ILM]-[IV]-K-P-[AGS]-x(2)-Y-[LM]-[DH]-[IMV]-[IMV]-x(2)-[AILV]-x-[DEGN]-x(4)-[LP]-x(2)-[AC]-x(3)-[SV]-[GS]-[DEG]-x(3)-[ILMV] E 5: 62.8637 24( 15) A-x(1,2)-A-x(0,2)-G-[AC]-x(2)-[ILV]-[AGS]-P-S-[ADGN]-x-[IM]-D-G-x-[IV]-x-[ADTV]-[ILM]-[KR]-x-[AEG]-[LM]-x(3)-[GN] F 6: 62.8637 26( 15) A-x(0,1)-A-x(0,2)-G-[AC]-x(2)-[ILV]-[AGS]-P-S-[ADGN]-x-[IM]-D-G-x-[IV]-x-[ADTV]-[ILM]-[KR]-x-[AEG]-[LM]-x(3)-[GN] G 7: 60.9813 15( 15) A-x-[AS]-G-[AC]-x(2)-[ILV]-[AGS]-P-S-x(1,2)-M-x(0,1)-D-G-x-[IV]-x-[ADTV]-[ILM]-[KR]-x-[AEG]-[LM]-x(3)-[GN] H 8: 53.6321 15( 15) G-[AC]-x(2)-[ILV]-[AGS]-P-S-x(1,2)-M-x(0,1)-D-G-x-[IV]-x-[ADTV]-[ILM]-[KR]-x-[AEG]-[LM]-x(3)-[GN] I 9: 49.6074 15( 15) Y-[AST]-[ATV]-K-x(1,2)-S-x(2,3)-Y-[EG]-P-F-R-[DES]-[AE]-[AILV]-x-[ACS]-[ANST] J 10: 43.6256 15( 15) P-x(1,2)-A-x(0,1)-Y-x-V-S-[DG]-E-[FY]-[AS]-M-[ILV]-x(2)-[AG] K 11: 40.9795 15( 15) P-x(2)-[AV]-Y-x-V-S-[DG]-E-[FY]-[AS]-M-x(2,4)-A L 12: 39.2264 21( 15) A-x(1,3)-S-x(1,3)-Y-[EG]-P-F-R-[DES]-[AE]-[AILV]-x-[ACS]-[ANST] M 13: 38.6200 24( 15) A-x-A-x(0,2)-G-[AC]-x(2)-[ILV]-[AGS]-P-S-x(1,2)-M-x-[DG]-[GQ] N 14: 37.2936 21( 15) A-x(0,1)-Y-x-V-S-[DG]-E-[FY]-[AS]-M-x(2,4)-A O 15: 37.2930 15( 15) K-[FY]-[AS]-[GS]-x(2)-Y-[EG]-P-F-R-x(4,5)-S P 16: 35.7726 15( 15) A-x-[AS]-G-[AC]-x(2)-[ILV]-[AGS]-P-S-x(1,2)-M-x(0,1)-D Q 17: 33.6236 15( 15) Y-x-V-S-[DG]-E-[FY]-[AS]-M-x(2,4)-A R 18: 29.4535 15( 15) V-S-[DG]-E-[FY]-[AS]-M-x(2,4)-A S 19: 28.4235 15( 15) G-[AC]-x(2)-[ILV]-[AGS]-P-S-x(1,2)-M-x(0,1)-D T 20: 27.2489 17( 15) S-x(2,3)-Y-[EG]-P-F-R-x(4,5)-S Best patterns with alignements: fitness hits(seqs) Pattern A 1: 78.5061 15( 15) D-x(2)-[EQ]-G-A-D-x-[ILV]-[ILM]-[IV]-K-P-[AGS]-x(2)-Y-[LM]-[DH]-[IMV]-[IMV]-x(2)-[AILV]-x-[DEGN]-x(4)-[LP]-x(2)-[AC]-x(3)-[SV]-[GS]-[DEG]-x(3)-[ILMV] Occurences: 15(15) HEM2_BACSU : 237- 280: reaqs DveEGADfLIVKPSlsYMDIMrdVkNeftlPlvAynvSGEysmV kaaaq HEM2_BRAJA : 264- 307: revel DisEGADmVMVKPGmpYLDVVrrVkDtfamPtfAyqvSGEyamI aaaag HEM2_ECOLI : 235- 278: aeyll DeaQGADcLMVKPAgaYLDIVreLrErtelPigAyqvSGEyamI kfaal HEM2_HUMAN : 241- 284: ravdr DvrEGADmLMVKPGmpYLDIVreVkDkhpdLplAvyhVSGefaM lwhga HEM2_METSC : 236- 279: revkl DidEGADiVMVKPAlpYLDIIrlVkDtfgvPtaAynvSGEysmI kaaid HEM2_MOUSE : 241- 284: ravar DiqEGADmLMVKPGlpYLDMVreVkDkhpeLplAvyqVSGefaM lwhga HEM2_MYCLE : 243- 286: reikl DldEGADiIMIKPAsgYLDVVatAaGvspvPvaAyqvSGEyamI caaaa HEM2_PEA : 308- 351: temre DesEGADiLLVKPGlpYLDIIrlLrDnsplPiaAyqvSGEysmI kagga HEM2_RAT : 241- 284: ravar DiqEGADiLMVKPGlpYLDMVqeVkDkhpeLplAvyqVSGefaM lwhga HEM2_RHOCA : 245- 288: rnvar DiaEGADmVMVKPGmpYLDIVrqVkDafgmPtyAyqvSGEyamL maavq HEM2_SELMA : 328- 371: levha DesEGADiLMVKPAmpYLHVIrlLrDtsalPisAyqvSGEysmI kaaas HEM2_SOYBN : 322- 365: temre DesEGADiLLVKPGlpYLDIIrlLrDnsplPiaAyqvSGEyamI kaaga HEM2_SPIOL : 343- 386: ietqe DesEGADiLLVKPGlpYLDIIrlLrDnsdlPiaAyqvSGEysmI kaggv HEM2_SYNP7 : 240- 283: kevel DvaEGADiVMVKPAlsYMDIIcrIkEttdlPvaAynvSGEysmV kaarl HEM2_YEAST : 252- 295: raler DmsEGADgIIVKPStfYLDIMrdAsEickdLpiCayhVSDeyaM lhaaa B 2: 74.3241 20( 15) E-x(0,2)-G-A-D-x-[ILV]-[ILM]-[IV]-K-P-[AGS]-x(2)-Y-[LM]-[DH]-[IMV]-[IMV]-x(2)-[AILV]-x-[DEGN]-x(4)-[LP]-x(2)-[AC]-x(3)-[SV]-[GS]-[DEG]-x(3)-[ILMV] Occurences: 20(15) HEM2_BACSU : 239- 280: aqsdv Ee-GADfLIVKPSlsYMDIMrdVkNeftlPlvAynvSGEysmV kaaaq HEM2_BACSU : 240- 280: qsdve E--GADfLIVKPSlsYMDIMrdVkNeftlPlvAynvSGEysmV kaaaq HEM2_BRAJA : 267- 307: eldis E--GADmVMVKPGmpYLDVVrrVkDtfamPtfAyqvSGEyamI aaaag HEM2_ECOLI : 236- 278: eylld EaqGADcLMVKPAgaYLDIVreLrErtelPigAyqvSGEyamI kfaal HEM2_HUMAN : 244- 284: drdvr E--GADmLMVKPGmpYLDIVreVkDkhpdLplAvyhVSGefaM lwhga HEM2_METSC : 239- 279: kldid E--GADiVMVKPAlpYLDIIrlVkDtfgvPtaAynvSGEysmI kaaid HEM2_MOUSE : 244- 284: ardiq E--GADmLMVKPGlpYLDMVreVkDkhpeLplAvyqVSGefaM lwhga HEM2_MYCLE : 246- 286: kldld E--GADiIMIKPAsgYLDVVatAaGvspvPvaAyqvSGEyamI caaaa HEM2_PEA : 309- 351: emred EseGADiLLVKPGlpYLDIIrlLrDnsplPiaAyqvSGEysmI kagga HEM2_PEA : 311- 351: redes E--GADiLLVKPGlpYLDIIrlLrDnsplPiaAyqvSGEysmI kagga HEM2_RAT : 244- 284: ardiq E--GADiLMVKPGlpYLDMVqeVkDkhpeLplAvyqVSGefaM lwhga HEM2_RHOCA : 248- 288: ardia E--GADmVMVKPGmpYLDIVrqVkDafgmPtyAyqvSGEyamL maavq HEM2_SELMA : 329- 371: evhad EseGADiLMVKPAmpYLHVIrlLrDtsalPisAyqvSGEysmI kaaas HEM2_SELMA : 331- 371: hades E--GADiLMVKPAmpYLHVIrlLrDtsalPisAyqvSGEysmI kaaas HEM2_SOYBN : 323- 365: emred EseGADiLLVKPGlpYLDIIrlLrDnsplPiaAyqvSGEyamI kaaga HEM2_SOYBN : 325- 365: redes E--GADiLLVKPGlpYLDIIrlLrDnsplPiaAyqvSGEyamI kaaga HEM2_SPIOL : 344- 386: etqed EseGADiLLVKPGlpYLDIIrlLrDnsdlPiaAyqvSGEysmI kaggv HEM2_SPIOL : 346- 386: qedes E--GADiLLVKPGlpYLDIIrlLrDnsdlPiaAyqvSGEysmI kaggv HEM2_SYNP7 : 243- 283: eldva E--GADiVMVKPAlsYMDIIcrIkEttdlPvaAynvSGEysmV kaarl HEM2_YEAST : 255- 295: erdms E--GADgIIVKPStfYLDIMrdAsEickdLpiCayhVSDeyaM lhaaa C 3: 74.3241 17( 15) D-x(1,3)-G-A-D-x-[ILV]-[ILM]-[IV]-K-P-[AGS]-x(2)-Y-[LM]-[DH]-[IMV]-[IMV]-x(2)-[AILV]-x-[DEGN]-x(4)-[LP]-x(2)-[AC]-x(3)-[SV]-[GS]-[DEG]-x(3)-[ILMV] Occurences: 17(15) HEM2_BACSU : 237- 280: reaqs DveeGADfLIVKPSlsYMDIMrdVkNeftlPlvAynvSGEysmV kaaaq HEM2_BRAJA : 264- 307: revel DiseGADmVMVKPGmpYLDVVrrVkDtfamPtfAyqvSGEyamI aaaag HEM2_ECOLI : 235- 278: aeyll DeaqGADcLMVKPAgaYLDIVreLrErtelPigAyqvSGEyamI kfaal HEM2_HUMAN : 241- 284: ravdr DvreGADmLMVKPGmpYLDIVreVkDkhpdLplAvyhVSGefaM lwhga HEM2_METSC : 236- 279: revkl DideGADiVMVKPAlpYLDIIrlVkDtfgvPtaAynvSGEysmI kaaid HEM2_METSC : 238- 279: vkldi De--GADiVMVKPAlpYLDIIrlVkDtfgvPtaAynvSGEysmI kaaid HEM2_MOUSE : 241- 284: ravar DiqeGADmLMVKPGlpYLDMVreVkDkhpeLplAvyqVSGefaM lwhga HEM2_MYCLE : 243- 286: reikl DldeGADiIMIKPAsgYLDVVatAaGvspvPvaAyqvSGEyamI caaaa HEM2_MYCLE : 245- 286: ikldl De--GADiIMIKPAsgYLDVVatAaGvspvPvaAyqvSGEyamI caaaa HEM2_PEA : 308- 351: temre DeseGADiLLVKPGlpYLDIIrlLrDnsplPiaAyqvSGEysmI kagga HEM2_RAT : 241- 284: ravar DiqeGADiLMVKPGlpYLDMVqeVkDkhpeLplAvyqVSGefaM lwhga HEM2_RHOCA : 245- 288: rnvar DiaeGADmVMVKPGmpYLDIVrqVkDafgmPtyAyqvSGEyamL maavq HEM2_SELMA : 328- 371: levha DeseGADiLMVKPAmpYLHVIrlLrDtsalPisAyqvSGEysmI kaaas HEM2_SOYBN : 322- 365: temre DeseGADiLLVKPGlpYLDIIrlLrDnsplPiaAyqvSGEyamI kaaga HEM2_SPIOL : 343- 386: ietqe DeseGADiLLVKPGlpYLDIIrlLrDnsdlPiaAyqvSGEysmI kaggv HEM2_SYNP7 : 240- 283: kevel DvaeGADiVMVKPAlsYMDIIcrIkEttdlPvaAynvSGEysmV kaarl HEM2_YEAST : 252- 295: raler DmseGADgIIVKPStfYLDIMrdAsEickdLpiCayhVSDeyaM lhaaa D 4: 66.9840 15( 15) A-D-x-[ILV]-[ILM]-[IV]-K-P-[AGS]-x(2)-Y-[LM]-[DH]-[IMV]-[IMV]-x(2)-[AILV]-x-[DEGN]-x(4)-[LP]-x(2)-[AC]-x(3)-[SV]-[GS]-[DEG]-x(3)-[ILMV] Occurences: 15(15) HEM2_BACSU : 242- 280: dveeg ADfLIVKPSlsYMDIMrdVkNeftlPlvAynvSGEysmV kaaaq HEM2_BRAJA : 269- 307: diseg ADmVMVKPGmpYLDVVrrVkDtfamPtfAyqvSGEyamI aaaag HEM2_ECOLI : 240- 278: deaqg ADcLMVKPAgaYLDIVreLrErtelPigAyqvSGEyamI kfaal HEM2_HUMAN : 246- 284: dvreg ADmLMVKPGmpYLDIVreVkDkhpdLplAvyhVSGefaM lwhga HEM2_METSC : 241- 279: dideg ADiVMVKPAlpYLDIIrlVkDtfgvPtaAynvSGEysmI kaaid HEM2_MOUSE : 246- 284: diqeg ADmLMVKPGlpYLDMVreVkDkhpeLplAvyqVSGefaM lwhga HEM2_MYCLE : 248- 286: dldeg ADiIMIKPAsgYLDVVatAaGvspvPvaAyqvSGEyamI caaaa HEM2_PEA : 313- 351: deseg ADiLLVKPGlpYLDIIrlLrDnsplPiaAyqvSGEysmI kagga HEM2_RAT : 246- 284: diqeg ADiLMVKPGlpYLDMVqeVkDkhpeLplAvyqVSGefaM lwhga HEM2_RHOCA : 250- 288: diaeg ADmVMVKPGmpYLDIVrqVkDafgmPtyAyqvSGEyamL maavq HEM2_SELMA : 333- 371: deseg ADiLMVKPAmpYLHVIrlLrDtsalPisAyqvSGEysmI kaaas HEM2_SOYBN : 327- 365: deseg ADiLLVKPGlpYLDIIrlLrDnsplPiaAyqvSGEyamI kaaga HEM2_SPIOL : 348- 386: deseg ADiLLVKPGlpYLDIIrlLrDnsdlPiaAyqvSGEysmI kaggv HEM2_SYNP7 : 245- 283: dvaeg ADiVMVKPAlsYMDIIcrIkEttdlPvaAynvSGEysmV kaarl HEM2_YEAST : 257- 295: dmseg ADgIIVKPStfYLDIMrdAsEickdLpiCayhVSDeyaM lhaaa E 5: 62.8637 24( 15) A-x(1,2)-A-x(0,2)-G-[AC]-x(2)-[ILV]-[AGS]-P-S-[ADGN]-x-[IM]-D-G-x-[IV]-x-[ADTV]-[ILM]-[KR]-x-[AEG]-[LM]-x(3)-[GN] Occurences: 24(15) HEM2_BACSU : 155- 183: tavsq Ak-A--GAdiIAPSNmMDGfVtVIReALdkeG fvnip HEM2_BRAJA : 181- 209: qalvq Ae-A--GCdiIAPSDmMDGrVaAIReGLdqaG lidvq HEM2_ECOLI : 153- 182: kqavv AaaA--GAdfIAPSAaMDGqVqAIRqALdaaG fkdta HEM2_ECOLI : 153- 182: kqavv Aa-Aa-GAdfIAPSAaMDGqVqAIRqALdaaG fkdta HEM2_ECOLI : 154- 182: qavva Aa-A--GAdfIAPSAaMDGqVqAIRqALdaaG fkdta HEM2_HUMAN : 156- 186: aeval Ay-AkaGCqvVAPSDmMDGrVeAIKeALmahG lgnrv HEM2_HUMAN : 158- 186: valay Ak-A--GCqvVAPSDmMDGrVeAIKeALmahG lgnrv HEM2_METSC : 154- 182: valsh Ae-A--GAdvVAPSDmMDGrVkAIReELeknG fddvi HEM2_MOUSE : 156- 186: aeval Ay-AkaGCqvVAPSDmMDGrVeAIKaALlkhG lgnrv HEM2_MOUSE : 158- 186: valay Ak-A--GCqvVAPSDmMDGrVeAIKaALlkhG lgnrv HEM2_MYCLE : 160- 190: velav Aq-AesGAnvVGPSGmMDGqIgALRdGLdsaG yadva HEM2_PEA : 224- 254: ckqav Aq-AraGAdvVSPSDmMDGrVgAMRvALdaeG fqhvs HEM2_PEA : 226- 254: qavaq Ar-A--GAdvVSPSDmMDGrVgAMRvALdaeG fqhvs HEM2_RAT : 156- 186: aeval Ay-AkaGCqvVAPSDmMDGrVeAIKaALlkhG lgnrv HEM2_RAT : 158- 186: valay Ak-A--GCqvVAPSDmMDGrVeAIKaALlkhG lgnrv HEM2_RHOCA : 160- 190: vkmal AqaAa-GAdiLGPSDmMDGrVgAIRqAMeaaG hkdia HEM2_RHOCA : 160- 190: vkmal Aq-AaaGAdiLGPSDmMDGrVgAIRqAMeaaG hkdia HEM2_RHOCA : 162- 190: malaq Aa-A--GAdiLGPSDmMDGrVgAIRqAMeaaG hkdia HEM2_SELMA : 244- 274: ckqav Aq-AeaGAdvVSPSDmMDGrVgAIRtALdeaG yyhvs HEM2_SELMA : 246- 274: qavaq Ae-A--GAdvVSPSDmMDGrVgAIRtALdeaG yyhvs HEM2_SOYBN : 238- 268: ckqav Aq-AqaGAdvVSPSDmMDGrVgALRaALdaeG fqhvs HEM2_SOYBN : 240- 268: qavaq Aq-A--GAdvVSPSDmMDGrVgALRaALdaeG fqhvs HEM2_SPIOL : 259- 289: ckqav Aq-AraGAdvVSPSDmMDGrVgAIRaALdaeG ysnvs HEM2_SPIOL : 261- 289: qavaq Ar-A--GAdvVSPSDmMDGrVgAIRaALdaeG ysnvs HEM2_SYNP7 : 158- 186: tavsq Ak-A--GAdiIAPSGmMDGfVaTIRdALdeaG fsdtp HEM2_YEAST : 169- 197: vavny Ak-A--GAhcVAPSDmIDGrIrDIKrGLinaN lahkt F 6: 62.8637 26( 15) A-x(0,1)-A-x(0,2)-G-[AC]-x(2)-[ILV]-[AGS]-P-S-[ADGN]-x-[IM]-D-G-x-[IV]-x-[ADTV]-[ILM]-[KR]-x-[AEG]-[LM]-x(3)-[GN] Occurences: 26(15) HEM2_BACSU : 155- 183: tavsq AkA--GAdiIAPSNmMDGfVtVIReALdkeG fvnip HEM2_BRAJA : 181- 209: qalvq AeA--GCdiIAPSDmMDGrVaAIReGLdqaG lidvq HEM2_ECOLI : 153- 182: kqavv AaAa-GAdfIAPSAaMDGqVqAIRqALdaaG fkdta HEM2_ECOLI : 153- 182: kqavv A-AaaGAdfIAPSAaMDGqVqAIRqALdaaG fkdta HEM2_ECOLI : 154- 182: qavva AaA--GAdfIAPSAaMDGqVqAIRqALdaaG fkdta HEM2_ECOLI : 154- 182: qavva A-Aa-GAdfIAPSAaMDGqVqAIRqALdaaG fkdta HEM2_ECOLI : 155- 182: avvaa A-A--GAdfIAPSAaMDGqVqAIRqALdaaG fkdta HEM2_HUMAN : 156- 186: aeval AyAkaGCqvVAPSDmMDGrVeAIKeALmahG lgnrv HEM2_HUMAN : 158- 186: valay AkA--GCqvVAPSDmMDGrVeAIKeALmahG lgnrv HEM2_METSC : 154- 182: valsh AeA--GAdvVAPSDmMDGrVkAIReELeknG fddvi HEM2_MOUSE : 156- 186: aeval AyAkaGCqvVAPSDmMDGrVeAIKaALlkhG lgnrv HEM2_MOUSE : 158- 186: valay AkA--GCqvVAPSDmMDGrVeAIKaALlkhG lgnrv HEM2_MYCLE : 160- 190: velav AqAesGAnvVGPSGmMDGqIgALRdGLdsaG yadva HEM2_PEA : 224- 254: ckqav AqAraGAdvVSPSDmMDGrVgAMRvALdaeG fqhvs HEM2_PEA : 226- 254: qavaq ArA--GAdvVSPSDmMDGrVgAMRvALdaeG fqhvs HEM2_RAT : 156- 186: aeval AyAkaGCqvVAPSDmMDGrVeAIKaALlkhG lgnrv HEM2_RAT : 158- 186: valay AkA--GCqvVAPSDmMDGrVeAIKaALlkhG lgnrv HEM2_RHOCA : 160- 190: vkmal AqAaaGAdiLGPSDmMDGrVgAIRqAMeaaG hkdia HEM2_RHOCA : 162- 190: malaq AaA--GAdiLGPSDmMDGrVgAIRqAMeaaG hkdia HEM2_RHOCA : 162- 190: malaq A-Aa-GAdiLGPSDmMDGrVgAIRqAMeaaG hkdia HEM2_RHOCA : 163- 190: alaqa A-A--GAdiLGPSDmMDGrVgAIRqAMeaaG hkdia HEM2_SELMA : 244- 274: ckqav AqAeaGAdvVSPSDmMDGrVgAIRtALdeaG yyhvs HEM2_SELMA : 246- 274: qavaq AeA--GAdvVSPSDmMDGrVgAIRtALdeaG yyhvs HEM2_SOYBN : 238- 268: ckqav AqAqaGAdvVSPSDmMDGrVgALRaALdaeG fqhvs HEM2_SOYBN : 240- 268: qavaq AqA--GAdvVSPSDmMDGrVgALRaALdaeG fqhvs HEM2_SPIOL : 259- 289: ckqav AqAraGAdvVSPSDmMDGrVgAIRaALdaeG ysnvs HEM2_SPIOL : 261- 289: qavaq ArA--GAdvVSPSDmMDGrVgAIRaALdaeG ysnvs HEM2_SYNP7 : 158- 186: tavsq AkA--GAdiIAPSGmMDGfVaTIRdALdeaG fsdtp HEM2_YEAST : 169- 197: vavny AkA--GAhcVAPSDmIDGrIrDIKrGLinaN lahkt G 7: 60.9813 15( 15) A-x-[AS]-G-[AC]-x(2)-[ILV]-[AGS]-P-S-x(1,2)-M-x(0,1)-D-G-x-[IV]-x-[ADTV]-[ILM]-[KR]-x-[AEG]-[LM]-x(3)-[GN] Occurences: 15(15) HEM2_BACSU : 155- 183: tavsq AkAGAdiIAPSnmM-DGfVtVIReALdkeG fvnip HEM2_BACSU : 155- 183: tavsq AkAGAdiIAPSn-MmDGfVtVIReALdkeG fvnip HEM2_BRAJA : 181- 209: qalvq AeAGCdiIAPSdmM-DGrVaAIReGLdqaG lidvq HEM2_BRAJA : 181- 209: qalvq AeAGCdiIAPSd-MmDGrVaAIReGLdqaG lidvq HEM2_ECOLI : 154- 182: qavva AaAGAdfIAPSaaM-DGqVqAIRqALdaaG fkdta HEM2_HUMAN : 158- 186: valay AkAGCqvVAPSdmM-DGrVeAIKeALmahG lgnrv HEM2_HUMAN : 158- 186: valay AkAGCqvVAPSd-MmDGrVeAIKeALmahG lgnrv HEM2_METSC : 154- 182: valsh AeAGAdvVAPSdmM-DGrVkAIReELeknG fddvi HEM2_METSC : 154- 182: valsh AeAGAdvVAPSd-MmDGrVkAIReELeknG fddvi HEM2_MOUSE : 158- 186: valay AkAGCqvVAPSdmM-DGrVeAIKaALlkhG lgnrv HEM2_MOUSE : 158- 186: valay AkAGCqvVAPSd-MmDGrVeAIKaALlkhG lgnrv HEM2_MYCLE : 162- 190: lavaq AeSGAnvVGPSgmM-DGqIgALRdGLdsaG yadva HEM2_MYCLE : 162- 190: lavaq AeSGAnvVGPSg-MmDGqIgALRdGLdsaG yadva HEM2_PEA : 226- 254: qavaq ArAGAdvVSPSdmM-DGrVgAMRvALdaeG fqhvs HEM2_PEA : 226- 254: qavaq ArAGAdvVSPSd-MmDGrVgAMRvALdaeG fqhvs HEM2_RAT : 158- 186: valay AkAGCqvVAPSdmM-DGrVeAIKaALlkhG lgnrv HEM2_RAT : 158- 186: valay AkAGCqvVAPSd-MmDGrVeAIKaALlkhG lgnrv HEM2_RHOCA : 162- 190: malaq AaAGAdiLGPSdmM-DGrVgAIRqAMeaaG hkdia HEM2_RHOCA : 162- 190: malaq AaAGAdiLGPSd-MmDGrVgAIRqAMeaaG hkdia HEM2_SELMA : 246- 274: qavaq AeAGAdvVSPSdmM-DGrVgAIRtALdeaG yyhvs HEM2_SELMA : 246- 274: qavaq AeAGAdvVSPSd-MmDGrVgAIRtALdeaG yyhvs HEM2_SOYBN : 240- 268: qavaq AqAGAdvVSPSdmM-DGrVgALRaALdaeG fqhvs HEM2_SOYBN : 240- 268: qavaq AqAGAdvVSPSd-MmDGrVgALRaALdaeG fqhvs HEM2_SPIOL : 261- 289: qavaq ArAGAdvVSPSdmM-DGrVgAIRaALdaeG ysnvs HEM2_SPIOL : 261- 289: qavaq ArAGAdvVSPSd-MmDGrVgAIRaALdaeG ysnvs HEM2_SYNP7 : 158- 186: tavsq AkAGAdiIAPSgmM-DGfVaTIRdALdeaG fsdtp HEM2_SYNP7 : 158- 186: tavsq AkAGAdiIAPSg-MmDGfVaTIRdALdeaG fsdtp HEM2_YEAST : 169- 197: vavny AkAGAhcVAPSd-MiDGrIrDIKrGLinaN lahkt H 8: 53.6321 15( 15) G-[AC]-x(2)-[ILV]-[AGS]-P-S-x(1,2)-M-x(0,1)-D-G-x-[IV]-x-[ADTV]-[ILM]-[KR]-x-[AEG]-[LM]-x(3)-[GN] Occurences: 15(15) HEM2_BACSU : 158- 183: sqaka GAdiIAPSnmM-DGfVtVIReALdkeG fvnip HEM2_BACSU : 158- 183: sqaka GAdiIAPSn-MmDGfVtVIReALdkeG fvnip HEM2_BRAJA : 184- 209: vqaea GCdiIAPSdmM-DGrVaAIReGLdqaG lidvq HEM2_BRAJA : 184- 209: vqaea GCdiIAPSd-MmDGrVaAIReGLdqaG lidvq HEM2_ECOLI : 157- 182: vaaaa GAdfIAPSaaM-DGqVqAIRqALdaaG fkdta HEM2_HUMAN : 161- 186: ayaka GCqvVAPSdmM-DGrVeAIKeALmahG lgnrv HEM2_HUMAN : 161- 186: ayaka GCqvVAPSd-MmDGrVeAIKeALmahG lgnrv HEM2_METSC : 157- 182: shaea GAdvVAPSdmM-DGrVkAIReELeknG fddvi HEM2_METSC : 157- 182: shaea GAdvVAPSd-MmDGrVkAIReELeknG fddvi HEM2_MOUSE : 161- 186: ayaka GCqvVAPSdmM-DGrVeAIKaALlkhG lgnrv HEM2_MOUSE : 161- 186: ayaka GCqvVAPSd-MmDGrVeAIKaALlkhG lgnrv HEM2_MYCLE : 165- 190: aqaes GAnvVGPSgmM-DGqIgALRdGLdsaG yadva HEM2_MYCLE : 165- 190: aqaes GAnvVGPSg-MmDGqIgALRdGLdsaG yadva HEM2_PEA : 229- 254: aqara GAdvVSPSdmM-DGrVgAMRvALdaeG fqhvs HEM2_PEA : 229- 254: aqara GAdvVSPSd-MmDGrVgAMRvALdaeG fqhvs HEM2_RAT : 161- 186: ayaka GCqvVAPSdmM-DGrVeAIKaALlkhG lgnrv HEM2_RAT : 161- 186: ayaka GCqvVAPSd-MmDGrVeAIKaALlkhG lgnrv HEM2_RHOCA : 165- 190: aqaaa GAdiLGPSdmM-DGrVgAIRqAMeaaG hkdia HEM2_RHOCA : 165- 190: aqaaa GAdiLGPSd-MmDGrVgAIRqAMeaaG hkdia HEM2_SELMA : 249- 274: aqaea GAdvVSPSdmM-DGrVgAIRtALdeaG yyhvs HEM2_SELMA : 249- 274: aqaea GAdvVSPSd-MmDGrVgAIRtALdeaG yyhvs HEM2_SOYBN : 243- 268: aqaqa GAdvVSPSdmM-DGrVgALRaALdaeG fqhvs HEM2_SOYBN : 243- 268: aqaqa GAdvVSPSd-MmDGrVgALRaALdaeG fqhvs HEM2_SPIOL : 264- 289: aqara GAdvVSPSdmM-DGrVgAIRaALdaeG ysnvs HEM2_SPIOL : 264- 289: aqara GAdvVSPSd-MmDGrVgAIRaALdaeG ysnvs HEM2_SYNP7 : 161- 186: sqaka GAdiIAPSgmM-DGfVaTIRdALdeaG fsdtp HEM2_SYNP7 : 161- 186: sqaka GAdiIAPSg-MmDGfVaTIRdALdeaG fsdtp HEM2_YEAST : 172- 197: nyaka GAhcVAPSd-MiDGrIrDIKrGLinaN lahkt I 9: 49.6074 15( 15) Y-[AST]-[ATV]-K-x(1,2)-S-x(2,3)-Y-[EG]-P-F-R-[DES]-[AE]-[AILV]-x-[ACS]-[ANST] Occurences: 15(15) HEM2_BACSU : 192- 211: ipims YAVKysSef-YGPFRDAAnST pqfgd HEM2_BACSU : 192- 211: ipims YAVKy-SsefYGPFRDAAnST pqfgd HEM2_BRAJA : 218- 237: vqima YAAKyaSaf-YGPFRDAIgSA ktltg HEM2_ECOLI : 191- 210: taims YSTKfaSsf-YGPFREAAgSA lkgdr HEM2_HUMAN : 196- 215: vsvms YSAKfaScf-YGPFRDAAkSS pafgd HEM2_METSC : 191- 210: viims YSAKyaSsf-YEPFRSAVySS pafgd HEM2_MOUSE : 196- 215: vsvms YSAKfaScf-YGPFRDAAqSS pafgd HEM2_MYCLE : 199- 218: vaila YAAKfsSaf-YGPFREAVsCS lsgdr HEM2_MYCLE : 199- 218: vaila YAAKf-SsafYGPFREAVsCS lsgdr HEM2_PEA : 263- 282: vsims YTAKyaSsf-YGPFREALdSN prfgd HEM2_RAT : 196- 215: vsvms YSAKfaScf-YGPFRDAAqSS pafgd HEM2_RHOCA : 199- 218: iails YAAKyaSaf-YGPFRDAVgAS salkg HEM2_SELMA : 283- 302: vsima YTAKyaSaf-YEPFREELdSN prfgd HEM2_SOYBN : 277- 296: vsims YTAKyaSsf-YGPFREALdSN prfgd HEM2_SPIOL : 298- 317: vsims YTAKyaSsf-YGPFREALdSN prfgd HEM2_SYNP7 : 195- 214: tpima YSAKyaSay-YGPFRDAAeST pqfgd HEM2_YEAST : 207- 226: tfvls YAAKf-SgnlYGPFRDAAcSA psngd J 10: 43.6256 15( 15) P-x(1,2)-A-x(0,1)-Y-x-V-S-[DG]-E-[FY]-[AS]-M-[ILV]-x(2)-[AG] Occurences: 15(15) HEM2_BACSU : 267- 283: neftl PlvA-YnVSGEYSMVkaA aqngw HEM2_BRAJA : 294- 310: dtfam PtfA-YqVSGEYAMIaaA agngw HEM2_ECOLI : 265- 281: ertel PigA-YqVSGEYAMIkfA alaga HEM2_HUMAN : 272- 288: khpdl Pl-AvYhVSGEFAMLwhG aqaga HEM2_METSC : 266- 282: dtfgv PtaA-YnVSGEYSMIkaA idany HEM2_METSC : 266- 282: dtfgv Pt-AaYnVSGEYSMIkaA idany HEM2_MOUSE : 272- 288: khpel Pl-AvYqVSGEFAMLwhG aqaga HEM2_MYCLE : 273- 289: gvspv PvaA-YqVSGEYAMIcaA aannw HEM2_MYCLE : 273- 289: gvspv Pv-AaYqVSGEYAMIcaA aannw HEM2_PEA : 338- 354: dnspl PiaA-YqVSGEYSMIkaG galkm HEM2_PEA : 338- 354: dnspl Pi-AaYqVSGEYSMIkaG galkm HEM2_RAT : 272- 288: khpel Pl-AvYqVSGEFAMLwhG akaga HEM2_RHOCA : 275- 291: dafgm PtyA-YqVSGEYAMLmaA vqngw HEM2_SELMA : 358- 374: dtsal PisA-YqVSGEYSMIkaA asqgm HEM2_SOYBN : 352- 368: dnspl PiaA-YqVSGEYAMIkaA galkm HEM2_SOYBN : 352- 368: dnspl Pi-AaYqVSGEYAMIkaA galkm HEM2_SPIOL : 373- 389: dnsdl PiaA-YqVSGEYSMIkaG gvlkm HEM2_SPIOL : 373- 389: dnsdl Pi-AaYqVSGEYSMIkaG gvlkm HEM2_SYNP7 : 270- 286: ettdl PvaA-YnVSGEYSMVkaA rlngw HEM2_SYNP7 : 270- 286: ettdl Pv-AaYnVSGEYSMVkaA rlngw HEM2_YEAST : 283- 299: ickdl PicA-YhVSDEYAMLhaA aekgv K 11: 40.9795 15( 15) P-x(2)-[AV]-Y-x-V-S-[DG]-E-[FY]-[AS]-M-x(2,4)-A Occurences: 15(15) HEM2_BACSU : 267- 282: neftl PlvAYnVSGEYSMvk--A aaqng HEM2_BACSU : 267- 283: neftl PlvAYnVSGEYSMvka-A aqngw HEM2_BACSU : 267- 284: neftl PlvAYnVSGEYSMvkaaA qngwi HEM2_BRAJA : 294- 309: dtfam PtfAYqVSGEYAMia--A aagng HEM2_BRAJA : 294- 310: dtfam PtfAYqVSGEYAMiaa-A agngw HEM2_BRAJA : 294- 311: dtfam PtfAYqVSGEYAMiaaaA gngwl HEM2_ECOLI : 265- 281: ertel PigAYqVSGEYAMikf-A alaga HEM2_ECOLI : 265- 282: ertel PigAYqVSGEYAMikfaA lagai HEM2_HUMAN : 272- 289: khpdl PlaVYhVSGEFAMlwhgA qagaf HEM2_METSC : 266- 281: dtfgv PtaAYnVSGEYSMik--A aidan HEM2_METSC : 266- 282: dtfgv PtaAYnVSGEYSMika-A idany HEM2_MOUSE : 272- 289: khpel PlaVYqVSGEFAMlwhgA qagaf HEM2_MYCLE : 273- 288: gvspv PvaAYqVSGEYAMic--A aaann HEM2_MYCLE : 273- 289: gvspv PvaAYqVSGEYAMica-A aannw HEM2_MYCLE : 273- 290: gvspv PvaAYqVSGEYAMicaaA annwi HEM2_PEA : 338- 353: dnspl PiaAYqVSGEYSMik--A ggalk HEM2_RAT : 272- 289: khpel PlaVYqVSGEFAMlwhgA kagaf HEM2_RHOCA : 275- 290: dafgm PtyAYqVSGEYAMlm--A avqng HEM2_RHOCA : 275- 291: dafgm PtyAYqVSGEYAMlma-A vqngw HEM2_SELMA : 358- 373: dtsal PisAYqVSGEYSMik--A aasqg HEM2_SELMA : 358- 374: dtsal PisAYqVSGEYSMika-A asqgm HEM2_SELMA : 358- 375: dtsal PisAYqVSGEYSMikaaA sqgml HEM2_SOYBN : 352- 367: dnspl PiaAYqVSGEYAMik--A agalk HEM2_SOYBN : 352- 368: dnspl PiaAYqVSGEYAMika-A galkm HEM2_SPIOL : 373- 388: dnsdl PiaAYqVSGEYSMik--A ggvlk HEM2_SYNP7 : 270- 285: ettdl PvaAYnVSGEYSMvk--A arlng HEM2_SYNP7 : 270- 286: ettdl PvaAYnVSGEYSMvka-A rlngw HEM2_YEAST : 283- 298: ickdl PicAYhVSDEYAMlh--A aaekg HEM2_YEAST : 283- 299: ickdl PicAYhVSDEYAMlha-A aekgv HEM2_YEAST : 283- 300: ickdl PicAYhVSDEYAMlhaaA ekgvv L 12: 39.2264 21( 15) A-x(1,3)-S-x(1,3)-Y-[EG]-P-F-R-[DES]-[AE]-[AILV]-x-[ACS]-[ANST] Occurences: 21(15) HEM2_BACSU : 193- 211: pimsy AvkySsefYGPFRDAAnST pqfgd HEM2_BRAJA : 220- 237: imaya AkyaSaf-YGPFRDAIgSA ktltg HEM2_ECOLI : 196- 210: ystkf As--Sf--YGPFREAAgSA lkgdr HEM2_HUMAN : 198- 215: vmsys AkfaScf-YGPFRDAAkSS pafgd HEM2_METSC : 193- 210: imsys AkyaSsf-YEPFRSAVySS pafgd HEM2_METSC : 196- 210: ysaky As--Sf--YEPFRSAVySS pafgd HEM2_MOUSE : 198- 215: vmsys AkfaScf-YGPFRDAAqSS pafgd HEM2_MYCLE : 200- 218: ailay AakfSsafYGPFREAVsCS lsgdr HEM2_MYCLE : 201- 218: ilaya AkfsSaf-YGPFREAVsCS lsgdr HEM2_MYCLE : 201- 218: ilaya Akf-SsafYGPFREAVsCS lsgdr HEM2_PEA : 265- 282: imsyt AkyaSsf-YGPFREALdSN prfgd HEM2_PEA : 268- 282: ytaky As--Sf--YGPFREALdSN prfgd HEM2_RAT : 198- 215: vmsys AkfaScf-YGPFRDAAqSS pafgd HEM2_RHOCA : 201- 218: ilsya AkyaSaf-YGPFRDAVgAS salkg HEM2_SELMA : 285- 302: imayt AkyaSaf-YEPFREELdSN prfgd HEM2_SOYBN : 279- 296: imsyt AkyaSsf-YGPFREALdSN prfgd HEM2_SOYBN : 282- 296: ytaky As--Sf--YGPFREALdSN prfgd HEM2_SPIOL : 300- 317: imsyt AkyaSsf-YGPFREALdSN prfgd HEM2_SPIOL : 303- 317: ytaky As--Sf--YGPFREALdSN prfgd HEM2_SYNP7 : 197- 214: imays AkyaSay-YGPFRDAAeST pqfgd HEM2_YEAST : 208- 226: fvlsy AakfSgnlYGPFRDAAcSA psngd HEM2_YEAST : 209- 226: vlsya Akf-SgnlYGPFRDAAcSA psngd M 13: 38.6200 24( 15) A-x-A-x(0,2)-G-[AC]-x(2)-[ILV]-[AGS]-P-S-x(1,2)-M-x-[DG]-[GQ] Occurences: 24(15) HEM2_BACSU : 155- 170: tavsq AkA--GAdiIAPSn-MmDG fvtvi HEM2_BRAJA : 181- 196: qalvq AeA--GCdiIAPSd-MmDG rvaai HEM2_ECOLI : 153- 170: kqavv AaAa-GAdfIAPSaaMdGQ vqair HEM2_ECOLI : 154- 170: qavva AaA--GAdfIAPSaaMdGQ vqair HEM2_HUMAN : 156- 173: aeval AyAkaGCqvVAPSd-MmDG rveai HEM2_HUMAN : 158- 173: valay AkA--GCqvVAPSd-MmDG rveai HEM2_METSC : 154- 169: valsh AeA--GAdvVAPSd-MmDG rvkai HEM2_MOUSE : 156- 173: aeval AyAkaGCqvVAPSd-MmDG rveai HEM2_MOUSE : 158- 173: valay AkA--GCqvVAPSd-MmDG rveai HEM2_MYCLE : 160- 177: velav AqAesGAnvVGPSg-MmDG qigal HEM2_MYCLE : 160- 178: velav AqAesGAnvVGPSgmMdGQ igalr HEM2_PEA : 224- 241: ckqav AqAraGAdvVSPSd-MmDG rvgam HEM2_PEA : 226- 241: qavaq ArA--GAdvVSPSd-MmDG rvgam HEM2_RAT : 156- 173: aeval AyAkaGCqvVAPSd-MmDG rveai HEM2_RAT : 158- 173: valay AkA--GCqvVAPSd-MmDG rveai HEM2_RHOCA : 160- 177: vkmal AqAaaGAdiLGPSd-MmDG rvgai HEM2_RHOCA : 162- 177: malaq AaA--GAdiLGPSd-MmDG rvgai HEM2_SELMA : 244- 261: ckqav AqAeaGAdvVSPSd-MmDG rvgai HEM2_SELMA : 246- 261: qavaq AeA--GAdvVSPSd-MmDG rvgai HEM2_SOYBN : 238- 255: ckqav AqAqaGAdvVSPSd-MmDG rvgal HEM2_SOYBN : 240- 255: qavaq AqA--GAdvVSPSd-MmDG rvgal HEM2_SPIOL : 259- 276: ckqav AqAraGAdvVSPSd-MmDG rvgai HEM2_SPIOL : 261- 276: qavaq ArA--GAdvVSPSd-MmDG rvgai HEM2_SYNP7 : 158- 173: tavsq AkA--GAdiIAPSg-MmDG fvati HEM2_YEAST : 169- 184: vavny AkA--GAhcVAPSd-MiDG rirdi N 14: 37.2936 21( 15) A-x(0,1)-Y-x-V-S-[DG]-E-[FY]-[AS]-M-x(2,4)-A Occurences: 21(15) HEM2_BACSU : 270- 282: tlplv A-YnVSGEYSMvk--A aaqng HEM2_BACSU : 270- 283: tlplv A-YnVSGEYSMvka-A aqngw HEM2_BACSU : 270- 284: tlplv A-YnVSGEYSMvkaaA qngwi HEM2_BRAJA : 297- 309: amptf A-YqVSGEYAMia--A aagng HEM2_BRAJA : 297- 310: amptf A-YqVSGEYAMiaa-A agngw HEM2_BRAJA : 297- 311: amptf A-YqVSGEYAMiaaaA gngwl HEM2_ECOLI : 268- 281: elpig A-YqVSGEYAMikf-A alaga HEM2_ECOLI : 268- 282: elpig A-YqVSGEYAMikfaA lagai HEM2_HUMAN : 274- 289: pdlpl AvYhVSGEFAMlwhgA qagaf HEM2_METSC : 268- 281: fgvpt AaYnVSGEYSMik--A aidan HEM2_METSC : 268- 282: fgvpt AaYnVSGEYSMika-A idany HEM2_METSC : 269- 281: gvpta A-YnVSGEYSMik--A aidan HEM2_METSC : 269- 282: gvpta A-YnVSGEYSMika-A idany HEM2_MOUSE : 274- 289: pelpl AvYqVSGEFAMlwhgA qagaf HEM2_MYCLE : 275- 288: spvpv AaYqVSGEYAMic--A aaann HEM2_MYCLE : 275- 289: spvpv AaYqVSGEYAMica-A aannw HEM2_MYCLE : 275- 290: spvpv AaYqVSGEYAMicaaA annwi HEM2_MYCLE : 276- 288: pvpva A-YqVSGEYAMic--A aaann HEM2_MYCLE : 276- 289: pvpva A-YqVSGEYAMica-A aannw HEM2_MYCLE : 276- 290: pvpva A-YqVSGEYAMicaaA annwi HEM2_PEA : 340- 353: splpi AaYqVSGEYSMik--A ggalk HEM2_PEA : 341- 353: plpia A-YqVSGEYSMik--A ggalk HEM2_RAT : 274- 289: pelpl AvYqVSGEFAMlwhgA kagaf HEM2_RHOCA : 278- 290: gmpty A-YqVSGEYAMlm--A avqng HEM2_RHOCA : 278- 291: gmpty A-YqVSGEYAMlma-A vqngw HEM2_SELMA : 361- 373: alpis A-YqVSGEYSMik--A aasqg HEM2_SELMA : 361- 374: alpis A-YqVSGEYSMika-A asqgm HEM2_SELMA : 361- 375: alpis A-YqVSGEYSMikaaA sqgml HEM2_SOYBN : 354- 367: splpi AaYqVSGEYAMik--A agalk HEM2_SOYBN : 354- 368: splpi AaYqVSGEYAMika-A galkm HEM2_SOYBN : 355- 367: plpia A-YqVSGEYAMik--A agalk HEM2_SOYBN : 355- 368: plpia A-YqVSGEYAMika-A galkm HEM2_SPIOL : 375- 388: sdlpi AaYqVSGEYSMik--A ggvlk HEM2_SPIOL : 376- 388: dlpia A-YqVSGEYSMik--A ggvlk HEM2_SYNP7 : 272- 285: tdlpv AaYnVSGEYSMvk--A arlng HEM2_SYNP7 : 272- 286: tdlpv AaYnVSGEYSMvka-A rlngw HEM2_SYNP7 : 273- 285: dlpva A-YnVSGEYSMvk--A arlng HEM2_SYNP7 : 273- 286: dlpva A-YnVSGEYSMvka-A rlngw HEM2_YEAST : 286- 298: dlpic A-YhVSDEYAMlh--A aaekg HEM2_YEAST : 286- 299: dlpic A-YhVSDEYAMlha-A aekgv HEM2_YEAST : 286- 300: dlpic A-YhVSDEYAMlhaaA ekgvv O 15: 37.2930 15( 15) K-[FY]-[AS]-[GS]-x(2)-Y-[EG]-P-F-R-x(4,5)-S Occurences: 15(15) HEM2_BACSU : 195- 210: msyav KYSSefYGPFRdaan-S tpqfg HEM2_BRAJA : 221- 236: mayaa KYASafYGPFRdaig-S aktlt HEM2_ECOLI : 194- 209: msyst KFASsfYGPFReaag-S alkgd HEM2_HUMAN : 199- 214: msysa KFAScfYGPFRdaak-S spafg HEM2_HUMAN : 199- 215: msysa KFAScfYGPFRdaaksS pafgd HEM2_METSC : 194- 209: msysa KYASsfYEPFRsavy-S spafg HEM2_METSC : 194- 210: msysa KYASsfYEPFRsavysS pafgd HEM2_MOUSE : 199- 214: msysa KFAScfYGPFRdaaq-S spafg HEM2_MOUSE : 199- 215: msysa KFAScfYGPFRdaaqsS pafgd HEM2_MYCLE : 202- 218: layaa KFSSafYGPFReavscS lsgdr HEM2_PEA : 266- 281: msyta KYASsfYGPFReald-S nprfg HEM2_RAT : 199- 214: msysa KFAScfYGPFRdaaq-S spafg HEM2_RAT : 199- 215: msysa KFAScfYGPFRdaaqsS pafgd HEM2_RHOCA : 202- 218: lsyaa KYASafYGPFRdavgaS salkg HEM2_SELMA : 286- 301: mayta KYASafYEPFReeld-S nprfg HEM2_SOYBN : 280- 295: msyta KYASsfYGPFReald-S nprfg HEM2_SPIOL : 301- 316: msyta KYASsfYGPFReald-S nprfg HEM2_SYNP7 : 198- 213: maysa KYASayYGPFRdaae-S tpqfg HEM2_YEAST : 210- 225: lsyaa KFSGnlYGPFRdaac-S apsng P 16: 35.7726 15( 15) A-x-[AS]-G-[AC]-x(2)-[ILV]-[AGS]-P-S-x(1,2)-M-x(0,1)-D Occurences: 15(15) HEM2_BACSU : 155- 169: tavsq AkAGAdiIAPSnmM-D gfvtv HEM2_BACSU : 155- 169: tavsq AkAGAdiIAPSn-MmD gfvtv HEM2_BRAJA : 181- 195: qalvq AeAGCdiIAPSdmM-D grvaa HEM2_BRAJA : 181- 195: qalvq AeAGCdiIAPSd-MmD grvaa HEM2_ECOLI : 154- 168: qavva AaAGAdfIAPSaaM-D gqvqa HEM2_HUMAN : 158- 172: valay AkAGCqvVAPSdmM-D grvea HEM2_HUMAN : 158- 172: valay AkAGCqvVAPSd-MmD grvea HEM2_METSC : 154- 168: valsh AeAGAdvVAPSdmM-D grvka HEM2_METSC : 154- 168: valsh AeAGAdvVAPSd-MmD grvka HEM2_MOUSE : 158- 172: valay AkAGCqvVAPSdmM-D grvea HEM2_MOUSE : 158- 172: valay AkAGCqvVAPSd-MmD grvea HEM2_MYCLE : 162- 176: lavaq AeSGAnvVGPSgmM-D gqiga HEM2_MYCLE : 162- 176: lavaq AeSGAnvVGPSg-MmD gqiga HEM2_PEA : 226- 240: qavaq ArAGAdvVSPSdmM-D grvga HEM2_PEA : 226- 240: qavaq ArAGAdvVSPSd-MmD grvga HEM2_RAT : 158- 172: valay AkAGCqvVAPSdmM-D grvea HEM2_RAT : 158- 172: valay AkAGCqvVAPSd-MmD grvea HEM2_RHOCA : 162- 176: malaq AaAGAdiLGPSdmM-D grvga HEM2_RHOCA : 162- 176: malaq AaAGAdiLGPSd-MmD grvga HEM2_SELMA : 246- 260: qavaq AeAGAdvVSPSdmM-D grvga HEM2_SELMA : 246- 260: qavaq AeAGAdvVSPSd-MmD grvga HEM2_SOYBN : 240- 254: qavaq AqAGAdvVSPSdmM-D grvga HEM2_SOYBN : 240- 254: qavaq AqAGAdvVSPSd-MmD grvga HEM2_SPIOL : 261- 275: qavaq ArAGAdvVSPSdmM-D grvga HEM2_SPIOL : 261- 275: qavaq ArAGAdvVSPSd-MmD grvga HEM2_SYNP7 : 158- 172: tavsq AkAGAdiIAPSgmM-D gfvat HEM2_SYNP7 : 158- 172: tavsq AkAGAdiIAPSg-MmD gfvat HEM2_YEAST : 169- 183: vavny AkAGAhcVAPSd-MiD grird Q 17: 33.6236 15( 15) Y-x-V-S-[DG]-E-[FY]-[AS]-M-x(2,4)-A Occurences: 15(15) HEM2_BACSU : 271- 282: lplva YnVSGEYSMvk--A aaqng HEM2_BACSU : 271- 283: lplva YnVSGEYSMvka-A aqngw HEM2_BACSU : 271- 284: lplva YnVSGEYSMvkaaA qngwi HEM2_BRAJA : 298- 309: mptfa YqVSGEYAMia--A aagng HEM2_BRAJA : 298- 310: mptfa YqVSGEYAMiaa-A agngw HEM2_BRAJA : 298- 311: mptfa YqVSGEYAMiaaaA gngwl HEM2_ECOLI : 269- 281: lpiga YqVSGEYAMikf-A alaga HEM2_ECOLI : 269- 282: lpiga YqVSGEYAMikfaA lagai HEM2_HUMAN : 276- 289: lplav YhVSGEFAMlwhgA qagaf HEM2_METSC : 270- 281: vptaa YnVSGEYSMik--A aidan HEM2_METSC : 270- 282: vptaa YnVSGEYSMika-A idany HEM2_MOUSE : 276- 289: lplav YqVSGEFAMlwhgA qagaf HEM2_MYCLE : 277- 288: vpvaa YqVSGEYAMic--A aaann HEM2_MYCLE : 277- 289: vpvaa YqVSGEYAMica-A aannw HEM2_MYCLE : 277- 290: vpvaa YqVSGEYAMicaaA annwi HEM2_PEA : 342- 353: lpiaa YqVSGEYSMik--A ggalk HEM2_RAT : 276- 289: lplav YqVSGEFAMlwhgA kagaf HEM2_RHOCA : 279- 290: mptya YqVSGEYAMlm--A avqng HEM2_RHOCA : 279- 291: mptya YqVSGEYAMlma-A vqngw HEM2_SELMA : 362- 373: lpisa YqVSGEYSMik--A aasqg HEM2_SELMA : 362- 374: lpisa YqVSGEYSMika-A asqgm HEM2_SELMA : 362- 375: lpisa YqVSGEYSMikaaA sqgml HEM2_SOYBN : 356- 367: lpiaa YqVSGEYAMik--A agalk HEM2_SOYBN : 356- 368: lpiaa YqVSGEYAMika-A galkm HEM2_SPIOL : 377- 388: lpiaa YqVSGEYSMik--A ggvlk HEM2_SYNP7 : 274- 285: lpvaa YnVSGEYSMvk--A arlng HEM2_SYNP7 : 274- 286: lpvaa YnVSGEYSMvka-A rlngw HEM2_YEAST : 287- 298: lpica YhVSDEYAMlh--A aaekg HEM2_YEAST : 287- 299: lpica YhVSDEYAMlha-A aekgv HEM2_YEAST : 287- 300: lpica YhVSDEYAMlhaaA ekgvv R 18: 29.4535 15( 15) V-S-[DG]-E-[FY]-[AS]-M-x(2,4)-A Occurences: 15(15) HEM2_BACSU : 273- 282: lvayn VSGEYSMvk--A aaqng HEM2_BACSU : 273- 283: lvayn VSGEYSMvka-A aqngw HEM2_BACSU : 273- 284: lvayn VSGEYSMvkaaA qngwi HEM2_BRAJA : 300- 309: tfayq VSGEYAMia--A aagng HEM2_BRAJA : 300- 310: tfayq VSGEYAMiaa-A agngw HEM2_BRAJA : 300- 311: tfayq VSGEYAMiaaaA gngwl HEM2_ECOLI : 271- 281: igayq VSGEYAMikf-A alaga HEM2_ECOLI : 271- 282: igayq VSGEYAMikfaA lagai HEM2_HUMAN : 278- 289: lavyh VSGEFAMlwhgA qagaf HEM2_METSC : 272- 281: taayn VSGEYSMik--A aidan HEM2_METSC : 272- 282: taayn VSGEYSMika-A idany HEM2_MOUSE : 278- 289: lavyq VSGEFAMlwhgA qagaf HEM2_MYCLE : 279- 288: vaayq VSGEYAMic--A aaann HEM2_MYCLE : 279- 289: vaayq VSGEYAMica-A aannw HEM2_MYCLE : 279- 290: vaayq VSGEYAMicaaA annwi HEM2_PEA : 344- 353: iaayq VSGEYSMik--A ggalk HEM2_RAT : 278- 289: lavyq VSGEFAMlwhgA kagaf HEM2_RHOCA : 281- 290: tyayq VSGEYAMlm--A avqng HEM2_RHOCA : 281- 291: tyayq VSGEYAMlma-A vqngw HEM2_SELMA : 364- 373: isayq VSGEYSMik--A aasqg HEM2_SELMA : 364- 374: isayq VSGEYSMika-A asqgm HEM2_SELMA : 364- 375: isayq VSGEYSMikaaA sqgml HEM2_SOYBN : 358- 367: iaayq VSGEYAMik--A agalk HEM2_SOYBN : 358- 368: iaayq VSGEYAMika-A galkm HEM2_SPIOL : 379- 388: iaayq VSGEYSMik--A ggvlk HEM2_SYNP7 : 276- 285: vaayn VSGEYSMvk--A arlng HEM2_SYNP7 : 276- 286: vaayn VSGEYSMvka-A rlngw HEM2_YEAST : 289- 298: icayh VSDEYAMlh--A aaekg HEM2_YEAST : 289- 299: icayh VSDEYAMlha-A aekgv HEM2_YEAST : 289- 300: icayh VSDEYAMlhaaA ekgvv S 19: 28.4235 15( 15) G-[AC]-x(2)-[ILV]-[AGS]-P-S-x(1,2)-M-x(0,1)-D Occurences: 15(15) HEM2_BACSU : 158- 169: sqaka GAdiIAPSnmM-D gfvtv HEM2_BACSU : 158- 169: sqaka GAdiIAPSn-MmD gfvtv HEM2_BRAJA : 184- 195: vqaea GCdiIAPSdmM-D grvaa HEM2_BRAJA : 184- 195: vqaea GCdiIAPSd-MmD grvaa HEM2_ECOLI : 157- 168: vaaaa GAdfIAPSaaM-D gqvqa HEM2_HUMAN : 161- 172: ayaka GCqvVAPSdmM-D grvea HEM2_HUMAN : 161- 172: ayaka GCqvVAPSd-MmD grvea HEM2_METSC : 157- 168: shaea GAdvVAPSdmM-D grvka HEM2_METSC : 157- 168: shaea GAdvVAPSd-MmD grvka HEM2_MOUSE : 161- 172: ayaka GCqvVAPSdmM-D grvea HEM2_MOUSE : 161- 172: ayaka GCqvVAPSd-MmD grvea HEM2_MYCLE : 165- 176: aqaes GAnvVGPSgmM-D gqiga HEM2_MYCLE : 165- 176: aqaes GAnvVGPSg-MmD gqiga HEM2_PEA : 229- 240: aqara GAdvVSPSdmM-D grvga HEM2_PEA : 229- 240: aqara GAdvVSPSd-MmD grvga HEM2_RAT : 161- 172: ayaka GCqvVAPSdmM-D grvea HEM2_RAT : 161- 172: ayaka GCqvVAPSd-MmD grvea HEM2_RHOCA : 165- 176: aqaaa GAdiLGPSdmM-D grvga HEM2_RHOCA : 165- 176: aqaaa GAdiLGPSd-MmD grvga HEM2_SELMA : 249- 260: aqaea GAdvVSPSdmM-D grvga HEM2_SELMA : 249- 260: aqaea GAdvVSPSd-MmD grvga HEM2_SOYBN : 243- 254: aqaqa GAdvVSPSdmM-D grvga HEM2_SOYBN : 243- 254: aqaqa GAdvVSPSd-MmD grvga HEM2_SPIOL : 264- 275: aqara GAdvVSPSdmM-D grvga HEM2_SPIOL : 264- 275: aqara GAdvVSPSd-MmD grvga HEM2_SYNP7 : 161- 172: sqaka GAdiIAPSgmM-D gfvat HEM2_SYNP7 : 161- 172: sqaka GAdiIAPSg-MmD gfvat HEM2_YEAST : 172- 183: nyaka GAhcVAPSd-MiD grird T 20: 27.2489 17( 15) S-x(2,3)-Y-[EG]-P-F-R-x(4,5)-S Occurences: 17(15) HEM2_BACSU : 197- 210: yavky SsefYGPFRdaan-S tpqfg HEM2_BACSU : 198- 210: avkys Sef-YGPFRdaan-S tpqfg HEM2_BRAJA : 224- 236: aakya Saf-YGPFRdaig-S aktlt HEM2_ECOLI : 197- 209: stkfa Ssf-YGPFReaag-S alkgd HEM2_HUMAN : 202- 214: sakfa Scf-YGPFRdaak-S spafg HEM2_HUMAN : 202- 215: sakfa Scf-YGPFRdaaksS pafgd HEM2_METSC : 197- 209: sakya Ssf-YEPFRsavy-S spafg HEM2_METSC : 197- 210: sakya Ssf-YEPFRsavysS pafgd HEM2_MOUSE : 202- 214: sakfa Scf-YGPFRdaaq-S spafg HEM2_MOUSE : 202- 215: sakfa Scf-YGPFRdaaqsS pafgd HEM2_MYCLE : 204- 218: yaakf SsafYGPFReavscS lsgdr HEM2_MYCLE : 205- 218: aakfs Saf-YGPFReavscS lsgdr HEM2_PEA : 269- 281: takya Ssf-YGPFReald-S nprfg HEM2_RAT : 202- 214: sakfa Scf-YGPFRdaaq-S spafg HEM2_RAT : 202- 215: sakfa Scf-YGPFRdaaqsS pafgd HEM2_RHOCA : 205- 218: aakya Saf-YGPFRdavgaS salkg HEM2_SELMA : 289- 301: takya Saf-YEPFReeld-S nprfg HEM2_SOYBN : 283- 295: takya Ssf-YGPFReald-S nprfg HEM2_SPIOL : 304- 316: takya Ssf-YGPFReald-S nprfg HEM2_SYNP7 : 201- 213: sakya Say-YGPFRdaae-S tpqfg HEM2_YEAST : 212- 225: yaakf SgnlYGPFRdaac-S apsng Number of patterns evaluated by Pratt:5201 Total running time: 6 seconds