------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 16 sequences from file DEFENSIN PATTERN CONSERVATION: CM: min Nr of Seqs to Match 16 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 50 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename DEFENSIN.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: DEF1_MOUSE 93 DEF1_RABIT 93 DEF2_MOUSE 35 DEF2_RABIT 34 DEF3_MOUSE 35 DEF3_RABIT 95 DEF4_HUMAN 97 DEF4_RABIT 95 DEF5_HUMAN 94 DEF5_MOUSE 36 DEF5_RABIT 95 DEF6_HUMAN 100 DEF6_RABIT 95 DEF7_RABIT 34 DEFN_CAVPO 93 DEFN_HUMAN 94 Pratt run started at Thu Feb 6 19:17:41 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 12.0102 27( 16) R-x(3,4)-C-x(2)-R 2: 11.5102 27( 16) R-x(3)-C-x(2,4)-R 3: 11.5102 16( 16) C-x-C-x(0,2)-R 4: 11.0102 28( 16) C-x(0,1)-C-x(0,2)-R 5: 10.5102 41( 16) R-x(1,3)-C-x(2,4)-R 6: 8.3401 42( 16) C-x(2)-R 7: 8.3401 16( 16) C-C 8: 8.3401 33( 16) C-R 9: 8.3401 20( 16) G-x-C 10: 8.3401 30( 16) R-x(3)-C 11: 7.8401 57( 16) C-x(1,2)-R 12: 7.8401 33( 16) R-x(1,2)-G 13: 7.8401 19( 16) E-x(3,4)-G 14: 7.8401 28( 16) E-x(2,3)-G 15: 7.8401 24( 16) R-x(1,2)-L 16: 7.8401 41( 16) R-x(2,3)-C 17: 7.3401 44( 16) R-x(0,2)-R 18: 7.3401 33( 16) G-x(1,3)-R 19: 7.3401 51( 16) R-x(1,3)-C Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 12.0102 27( 16) R-x(3,4)-C-x(2)-R B 2: 11.5644 19( 16) C-x-[CT]-R C 3: 11.5110 22( 16) R-x(3)-C-x(2)-[QR] D 4: 11.5102 27( 16) R-x(3)-C-x(2,4)-R E 5: 11.5102 16( 16) C-x-C-x(0,2)-R F 6: 11.0110 26( 16) R-x(2,3)-C-x(2)-[QR] G 7: 11.0102 28( 16) C-x(0,1)-C-x(0,2)-R H 8: 10.5359 18( 16) E-x(3,4)-G-x-[ACG] I 9: 10.5359 18( 16) E-x(2,3)-G-x-[ACG] J 10: 10.5110 32( 16) R-x(1,3)-C-x(2)-[QR] K 11: 10.5102 41( 16) R-x(1,3)-C-x(2,4)-R L 12: 8.3401 16( 16) C-C M 13: 8.3401 33( 16) C-R N 14: 8.3401 20( 16) G-x-C O 15: 7.8401 57( 16) C-x(1,2)-R P 16: 7.8401 33( 16) R-x(1,2)-G Q 17: 7.8401 24( 16) R-x(1,2)-L R 18: 7.3401 44( 16) R-x(0,2)-R S 19: 7.3401 33( 16) G-x(1,3)-R Best patterns with alignements: fitness hits(seqs) Pattern A 1: 12.0102 27( 16) R-x(3,4)-C-x(2)-R Occurences: 27(16) DEF1_MOUSE : 60- 67: qeesl Rdlv-CycR srgck DEF1_MOUSE : 67- 74: lvcyc Rsrg-CkgR ermng DEF1_RABIT : 85- 92: rvnga Ryvr-CcsR r DEF1_RABIT : 85- 93: rvnga RyvrcCsrR DEF2_MOUSE : 2- 9: l Rdlv-CycR trgck DEF2_MOUSE : 9- 16: lvcyc Rtrg-CkrR ermng DEF2_RABIT : 6- 14: grcvc RkqllCsyR errig DEF2_RABIT : 16- 24: csyre RrigdCkiR gvrfp DEF2_RABIT : 17- 24: syrer Rigd-CkiR gvrfp DEF2_RABIT : 27- 34: kirgv Rfpf-CcpR DEF3_MOUSE : 2- 9: l Rdlv-CycR krgck DEF3_MOUSE : 9- 16: lvcyc Rkrg-CkrR ermng DEF3_RABIT : 68- 75: vvcac Rral-ClpR errag DEF3_RABIT : 77- 85: clpre RragfCriR grihp DEF3_RABIT : 78- 85: lprer Ragf-CriR grihp DEF3_RABIT : 87- 95: crirg RihplCcrR DEF4_HUMAN : 61- 68: vsgst Rgmv-CscR lvfcr DEF4_RABIT : 77- 85: clple RragfCriR grihp DEF4_RABIT : 78- 85: lpler Ragf-CriR grihp DEF4_RABIT : 87- 95: crirg RihplCcrR DEF5_HUMAN : 68- 75: atcyc Rtgr-CatR eslsg DEF5_MOUSE : 11- 18: licyc Rirg-CkrR ervfg DEF5_RABIT : 88- 95: tvngv Rhtl-CcrR DEF6_HUMAN : 68- 75: algst Raft-ChcR rscys DEF6_RABIT : 88- 95: tingv Rhtl-CcrR DEF7_RABIT : 26- 33: rvnga Ryvr-CcsR r DEF7_RABIT : 26- 34: rvnga RyvrcCsrR DEFN_CAVPO : 63- 70: gagag Rrci-CttR tcrfp DEFN_HUMAN : 61- 69: khpgs RknmaCycR ipaci B 2: 11.5644 19( 16) C-x-[CT]-R Occurences: 19(16) DEF1_MOUSE : 64- 67: lrdlv CyCR srgck DEF1_RABIT : 62- 65: dtkgi CaCR rrfcp DEF2_MOUSE : 6- 9: lrdlv CyCR trgck DEF2_MOUSE : 8- 11: dlvcy CrTR gckrr DEF2_RABIT : 3- 6: gr CvCR kqllc DEF3_MOUSE : 6- 9: lrdlv CyCR krgck DEF3_RABIT : 65- 68: kagvv CaCR ralcl DEF4_HUMAN : 65- 68: trgmv CsCR lvfcr DEF4_HUMAN : 92- 95: vsfty CcTR vd DEF4_RABIT : 65- 68: kagvv CaCR ralcl DEF5_HUMAN : 65- 68: qarat CyCR tgrca DEF5_HUMAN : 72- 75: crtgr CaTR eslsg DEF5_MOUSE : 8- 11: akkli CyCR irgck DEF5_RABIT : 65- 68: kagvs CtCR rfscg DEF6_HUMAN : 72- 75: traft ChCR rscys DEF6_RABIT : 65- 68: kagvf CtCR gflcg DEF7_RABIT : 3- 6: gi CaCR rrfcl DEFN_CAVPO : 67- 70: grrci CtTR tcrfp DEFN_HUMAN : 66- 69: rknma CyCR ipaci C 3: 11.5110 22( 16) R-x(3)-C-x(2)-[QR] Occurences: 22(16) DEF1_MOUSE : 60- 67: qeesl RdlvCycR srgck DEF1_MOUSE : 67- 74: lvcyc RsrgCkgR ermng DEF1_RABIT : 85- 92: rvnga RyvrCcsR r DEF2_MOUSE : 2- 9: l RdlvCycR trgck DEF2_MOUSE : 9- 16: lvcyc RtrgCkrR ermng DEF2_RABIT : 17- 24: syrer RigdCkiR gvrfp DEF2_RABIT : 27- 34: kirgv RfpfCcpR DEF3_MOUSE : 2- 9: l RdlvCycR krgck DEF3_MOUSE : 9- 16: lvcyc RkrgCkrR ermng DEF3_RABIT : 68- 75: vvcac RralClpR errag DEF3_RABIT : 78- 85: lprer RagfCriR grihp DEF4_HUMAN : 61- 68: vsgst RgmvCscR lvfcr DEF4_RABIT : 78- 85: lpler RagfCriR grihp DEF5_HUMAN : 68- 75: atcyc RtgrCatR eslsg DEF5_MOUSE : 11- 18: licyc RirgCkrR ervfg DEF5_RABIT : 88- 95: tvngv RhtlCcrR DEF6_HUMAN : 68- 75: algst RaftChcR rscys DEF6_RABIT : 88- 95: tingv RhtlCcrR DEF7_RABIT : 26- 33: rvnga RyvrCcsR r DEFN_CAVPO : 63- 70: gagag RrciCttR tcrfp DEFN_CAVPO : 78- 85: rfpyr RlgtCifQ nrvyt DEFN_HUMAN : 79- 86: iager RygtCiyQ grlwa D 4: 11.5102 27( 16) R-x(3)-C-x(2,4)-R Occurences: 27(16) DEF1_MOUSE : 60- 67: qeesl RdlvCyc--R srgck DEF1_MOUSE : 60- 69: qeesl RdlvCycrsR gckgr DEF1_MOUSE : 67- 74: lvcyc RsrgCkg--R ermng DEF1_MOUSE : 67- 76: lvcyc RsrgCkgreR mngtc DEF1_RABIT : 65- 74: gicac RrrfCpnseR fsgyc DEF1_RABIT : 85- 92: rvnga RyvrCcs--R r DEF1_RABIT : 85- 93: rvnga RyvrCcsr-R DEF2_MOUSE : 2- 9: l RdlvCyc--R trgck DEF2_MOUSE : 2- 11: l RdlvCycrtR gckrr DEF2_MOUSE : 9- 16: lvcyc RtrgCkr--R ermng DEF2_MOUSE : 9- 18: lvcyc RtrgCkrreR mngtc DEF2_RABIT : 17- 24: syrer RigdCki--R gvrfp DEF2_RABIT : 27- 34: kirgv RfpfCcp--R DEF3_MOUSE : 2- 9: l RdlvCyc--R krgck DEF3_MOUSE : 2- 11: l RdlvCycrkR gckrr DEF3_MOUSE : 9- 16: lvcyc RkrgCkr--R ermng DEF3_MOUSE : 9- 18: lvcyc RkrgCkrreR mngtc DEF3_RABIT : 68- 75: vvcac RralClp--R errag DEF3_RABIT : 68- 77: vvcac RralClpreR ragfc DEF3_RABIT : 78- 85: lprer RagfCri--R grihp DEF3_RABIT : 78- 87: lprer RagfCrirgR ihplc DEF4_HUMAN : 61- 68: vsgst RgmvCsc--R lvfcr DEF4_RABIT : 68- 77: vvcac RralClpleR ragfc DEF4_RABIT : 78- 85: lpler RagfCri--R grihp DEF4_RABIT : 78- 87: lpler RagfCrirgR ihplc DEF5_HUMAN : 68- 75: atcyc RtgrCat--R eslsg DEF5_MOUSE : 11- 18: licyc RirgCkr--R ervfg DEF5_MOUSE : 11- 20: licyc RirgCkrreR vfgtc DEF5_RABIT : 68- 77: vsctc RrfsCgfgeR asgsc DEF5_RABIT : 88- 95: tvngv RhtlCcr--R DEF6_HUMAN : 68- 75: algst RaftChc--R rscys DEF6_HUMAN : 68- 76: algst RaftChcr-R scyst DEF6_RABIT : 68- 77: vfctc RgflCgsgeR asgsc DEF6_RABIT : 88- 95: tingv RhtlCcr--R DEF7_RABIT : 26- 33: rvnga RyvrCcs--R r DEF7_RABIT : 26- 34: rvnga RyvrCcsr-R DEFN_CAVPO : 63- 70: gagag RrciCtt--R tcrfp DEFN_CAVPO : 78- 87: rfpyr RlgtCifqnR vytfc DEFN_HUMAN : 69- 78: macyc RipaCiageR rygtc DEFN_HUMAN : 79- 88: iager RygtCiyqgR lwafc E 5: 11.5102 16( 16) C-x-C-x(0,2)-R Occurences: 16(16) DEF1_MOUSE : 64- 67: lrdlv CyC--R srgck DEF1_MOUSE : 64- 69: lrdlv CyCrsR gckgr DEF1_RABIT : 62- 65: dtkgi CaC--R rrfcp DEF1_RABIT : 62- 66: dtkgi CaCr-R rfcpn DEF1_RABIT : 62- 67: dtkgi CaCrrR fcpns DEF2_MOUSE : 6- 9: lrdlv CyC--R trgck DEF2_MOUSE : 6- 11: lrdlv CyCrtR gckrr DEF2_RABIT : 3- 6: gr CvC--R kqllc DEF3_MOUSE : 6- 9: lrdlv CyC--R krgck DEF3_MOUSE : 6- 11: lrdlv CyCrkR gckrr DEF3_RABIT : 65- 68: kagvv CaC--R ralcl DEF3_RABIT : 65- 69: kagvv CaCr-R alclp DEF4_HUMAN : 65- 68: trgmv CsC--R lvfcr DEF4_RABIT : 65- 68: kagvv CaC--R ralcl DEF4_RABIT : 65- 69: kagvv CaCr-R alclp DEF5_HUMAN : 65- 68: qarat CyC--R tgrca DEF5_MOUSE : 8- 11: akkli CyC--R irgck DEF5_MOUSE : 8- 13: akkli CyCriR gckrr DEF5_RABIT : 65- 68: kagvs CtC--R rfscg DEF5_RABIT : 65- 69: kagvs CtCr-R fscgf DEF6_HUMAN : 72- 75: traft ChC--R rscys DEF6_HUMAN : 72- 76: traft ChCr-R scyst DEF6_RABIT : 65- 68: kagvf CtC--R gflcg DEF7_RABIT : 3- 6: gi CaC--R rrfcl DEF7_RABIT : 3- 7: gi CaCr-R rfcln DEF7_RABIT : 3- 8: gi CaCrrR fclnf DEFN_CAVPO : 65- 70: gagrr CiCttR tcrfp DEFN_HUMAN : 66- 69: rknma CyC--R ipaci F 6: 11.0110 26( 16) R-x(2,3)-C-x(2)-[QR] Occurences: 26(16) DEF1_MOUSE : 60- 67: qeesl RdlvCycR srgck DEF1_MOUSE : 67- 74: lvcyc RsrgCkgR ermng DEF1_RABIT : 85- 92: rvnga RyvrCcsR r DEF2_MOUSE : 2- 9: l RdlvCycR trgck DEF2_MOUSE : 9- 16: lvcyc RtrgCkrR ermng DEF2_RABIT : 2- 8: g Rcv-CrkQ llcsy DEF2_RABIT : 17- 24: syrer RigdCkiR gvrfp DEF2_RABIT : 27- 34: kirgv RfpfCcpR DEF3_MOUSE : 2- 9: l RdlvCycR krgck DEF3_MOUSE : 9- 16: lvcyc RkrgCkrR ermng DEF3_RABIT : 68- 75: vvcac RralClpR errag DEF3_RABIT : 69- 75: vcacr Ral-ClpR errag DEF3_RABIT : 78- 85: lprer RagfCriR grihp DEF4_HUMAN : 61- 68: vsgst RgmvCscR lvfcr DEF4_RABIT : 78- 85: lpler RagfCriR grihp DEF5_HUMAN : 62- 68: sgsqa Rat-CycR tgrca DEF5_HUMAN : 68- 75: atcyc RtgrCatR eslsg DEF5_MOUSE : 11- 18: licyc RirgCkrR ervfg DEF5_RABIT : 88- 95: tvngv RhtlCcrR DEF6_HUMAN : 68- 75: algst RaftChcR rscys DEF6_RABIT : 88- 95: tingv RhtlCcrR DEF7_RABIT : 26- 33: rvnga RyvrCcsR r DEFN_CAVPO : 63- 70: gagag RrciCttR tcrfp DEFN_CAVPO : 64- 70: agagr Rci-CttR tcrfp DEFN_CAVPO : 78- 85: rfpyr RlgtCifQ nrvyt DEFN_HUMAN : 79- 86: iager RygtCiyQ grlwa G 7: 11.0102 28( 16) C-x(0,1)-C-x(0,2)-R Occurences: 28(16) DEF1_MOUSE : 64- 67: lrdlv CyC--R srgck DEF1_MOUSE : 64- 69: lrdlv CyCrsR gckgr DEF1_MOUSE : 91- 93: llytl C-C--R DEF1_RABIT : 62- 65: dtkgi CaC--R rrfcp DEF1_RABIT : 62- 66: dtkgi CaCr-R rfcpn DEF1_RABIT : 62- 67: dtkgi CaCrrR fcpns DEF1_RABIT : 89- 92: aryvr C-Cs-R r DEF1_RABIT : 89- 93: aryvr C-CsrR DEF2_MOUSE : 6- 9: lrdlv CyC--R trgck DEF2_MOUSE : 6- 11: lrdlv CyCrtR gckrr DEF2_MOUSE : 33- 35: lmytl C-C--R DEF2_RABIT : 3- 6: gr CvC--R kqllc DEF2_RABIT : 31- 34: vrfpf C-Cp-R DEF3_MOUSE : 6- 9: lrdlv CyC--R krgck DEF3_MOUSE : 6- 11: lrdlv CyCrkR gckrr DEF3_MOUSE : 33- 35: lmytl C-C--R DEF3_RABIT : 65- 68: kagvv CaC--R ralcl DEF3_RABIT : 65- 69: kagvv CaCr-R alclp DEF3_RABIT : 92- 94: rihpl C-C--R r DEF3_RABIT : 92- 95: rihpl C-Cr-R DEF4_HUMAN : 65- 68: trgmv CsC--R lvfcr DEF4_HUMAN : 92- 95: vsfty C-Ct-R vd DEF4_RABIT : 65- 68: kagvv CaC--R ralcl DEF4_RABIT : 65- 69: kagvv CaCr-R alclp DEF4_RABIT : 92- 94: rihpl C-C--R r DEF4_RABIT : 92- 95: rihpl C-Cr-R DEF5_HUMAN : 65- 68: qarat CyC--R tgrca DEF5_HUMAN : 92- 94: rlyrl C-C--R DEF5_MOUSE : 8- 11: akkli CyC--R irgck DEF5_MOUSE : 8- 13: akkli CyCriR gckrr DEF5_RABIT : 65- 68: kagvs CtC--R rfscg DEF5_RABIT : 65- 69: kagvs CtCr-R fscgf DEF5_RABIT : 92- 94: vrhtl C-C--R r DEF5_RABIT : 92- 95: vrhtl C-Cr-R DEF6_HUMAN : 72- 75: traft ChC--R rscys DEF6_HUMAN : 72- 76: traft ChCr-R scyst DEF6_RABIT : 65- 68: kagvf CtC--R gflcg DEF6_RABIT : 92- 94: vrhtl C-C--R r DEF6_RABIT : 92- 95: vrhtl C-Cr-R DEF7_RABIT : 3- 6: gi CaC--R rrfcl DEF7_RABIT : 3- 7: gi CaCr-R rfcln DEF7_RABIT : 3- 8: gi CaCrrR fclnf DEF7_RABIT : 30- 33: aryvr C-Cs-R r DEF7_RABIT : 30- 34: aryvr C-CsrR DEFN_CAVPO : 65- 70: gagrr CiCttR tcrfp DEFN_HUMAN : 66- 69: rknma CyC--R ipaci H 8: 10.5359 18( 16) E-x(3,4)-G-x-[ACG] Occurences: 18(16) DEF1_MOUSE : 75- 81: gckgr Ermn-GtC rkghl DEF1_RABIT : 73- 79: fcpns Erfs-GyC rvnga DEF2_MOUSE : 17- 23: gckrr Ermn-GtC rkghl DEF2_RABIT : 15- 21: lcsyr Erri-GdC kirgv DEF3_MOUSE : 17- 23: gckrr Ermn-GtC rkghl DEF3_RABIT : 76- 82: lclpr Erra-GfC rirgr DEF4_HUMAN : 76- 82: fcrrt Elrv-GnC liggv DEF4_RABIT : 76- 82: lclpl Erra-GfC rirgr DEF5_HUMAN : 76- 82: rcatr Esls-GvC eisgr DEF5_MOUSE : 19- 25: gckrr Ervf-GtC rnlfl DEF5_RABIT : 20- 26: lqaqa Elhs-GmA ddgvd DEF5_RABIT : 76- 82: scgfg Eras-GsC tvngv DEF6_HUMAN : 82- 88: scyst Eysy-GtC tvmgi DEF6_RABIT : 20- 26: lqaqa Elhs-GmA ddgvd DEF6_RABIT : 76- 82: lcgsg Eras-GsC tingv DEF7_RABIT : 14- 20: fclnf Eqfs-GyC rvnga DEFN_CAVPO : 55- 62: estsl EdagaGaG rrcic DEFN_HUMAN : 77- 83: aciag Erry-GtC iyqgr I 9: 10.5359 18( 16) E-x(2,3)-G-x-[ACG] Occurences: 18(16) DEF1_MOUSE : 75- 81: gckgr ErmnGtC rkghl DEF1_RABIT : 73- 79: fcpns ErfsGyC rvnga DEF2_MOUSE : 17- 23: gckrr ErmnGtC rkghl DEF2_RABIT : 15- 21: lcsyr ErriGdC kirgv DEF3_MOUSE : 17- 23: gckrr ErmnGtC rkghl DEF3_RABIT : 76- 82: lclpr ErraGfC rirgr DEF4_HUMAN : 76- 82: fcrrt ElrvGnC liggv DEF4_RABIT : 76- 82: lclpl ErraGfC rirgr DEF5_HUMAN : 76- 82: rcatr EslsGvC eisgr DEF5_MOUSE : 19- 25: gckrr ErvfGtC rnlfl DEF5_RABIT : 20- 26: lqaqa ElhsGmA ddgvd DEF5_RABIT : 76- 82: scgfg ErasGsC tvngv DEF6_HUMAN : 82- 88: scyst EysyGtC tvmgi DEF6_RABIT : 20- 26: lqaqa ElhsGmA ddgvd DEF6_RABIT : 76- 82: lcgsg ErasGsC tingv DEF7_RABIT : 14- 20: fclnf EqfsGyC rvnga DEFN_CAVPO : 55- 60: estsl Eda-GaG agrrc DEFN_HUMAN : 77- 83: aciag ErryGtC iyqgr J 10: 10.5110 32( 16) R-x(1,3)-C-x(2)-[QR] Occurences: 32(16) DEF1_MOUSE : 60- 67: qeesl RdlvCycR srgck DEF1_MOUSE : 67- 74: lvcyc RsrgCkgR ermng DEF1_MOUSE : 69- 74: cycrs Rg--CkgR ermng DEF1_RABIT : 85- 92: rvnga RyvrCcsR r DEF1_RABIT : 88- 93: garyv Rc--CsrR DEF2_MOUSE : 2- 9: l RdlvCycR trgck DEF2_MOUSE : 9- 16: lvcyc RtrgCkrR ermng DEF2_MOUSE : 11- 16: cycrt Rg--CkrR ermng DEF2_RABIT : 2- 8: g Rcv-CrkQ llcsy DEF2_RABIT : 17- 24: syrer RigdCkiR gvrfp DEF2_RABIT : 27- 34: kirgv RfpfCcpR DEF3_MOUSE : 2- 9: l RdlvCycR krgck DEF3_MOUSE : 9- 16: lvcyc RkrgCkrR ermng DEF3_MOUSE : 11- 16: cycrk Rg--CkrR ermng DEF3_RABIT : 68- 75: vvcac RralClpR errag DEF3_RABIT : 69- 75: vcacr Ral-ClpR errag DEF3_RABIT : 78- 85: lprer RagfCriR grihp DEF4_HUMAN : 61- 68: vsgst RgmvCscR lvfcr DEF4_RABIT : 78- 85: lpler RagfCriR grihp DEF5_HUMAN : 62- 68: sgsqa Rat-CycR tgrca DEF5_HUMAN : 68- 75: atcyc RtgrCatR eslsg DEF5_MOUSE : 11- 18: licyc RirgCkrR ervfg DEF5_MOUSE : 13- 18: cycri Rg--CkrR ervfg DEF5_RABIT : 88- 95: tvngv RhtlCcrR DEF6_HUMAN : 68- 75: algst RaftChcR rscys DEF6_RABIT : 88- 95: tingv RhtlCcrR DEF7_RABIT : 26- 33: rvnga RyvrCcsR r DEF7_RABIT : 29- 34: garyv Rc--CsrR DEFN_CAVPO : 63- 70: gagag RrciCttR tcrfp DEFN_CAVPO : 64- 70: agagr Rci-CttR tcrfp DEFN_CAVPO : 78- 85: rfpyr RlgtCifQ nrvyt DEFN_HUMAN : 79- 86: iager RygtCiyQ grlwa K 11: 10.5102 41( 16) R-x(1,3)-C-x(2,4)-R Occurences: 41(16) DEF1_MOUSE : 60- 67: qeesl RdlvCyc--R srgck DEF1_MOUSE : 60- 69: qeesl RdlvCycrsR gckgr DEF1_MOUSE : 67- 74: lvcyc RsrgCkg--R ermng DEF1_MOUSE : 67- 76: lvcyc RsrgCkgreR mngtc DEF1_MOUSE : 69- 74: cycrs Rg--Ckg--R ermng DEF1_MOUSE : 69- 76: cycrs Rg--CkgreR mngtc DEF1_RABIT : 65- 74: gicac RrrfCpnseR fsgyc DEF1_RABIT : 66- 74: icacr Rrf-CpnseR fsgyc DEF1_RABIT : 67- 74: cacrr Rf--CpnseR fsgyc DEF1_RABIT : 85- 92: rvnga RyvrCcs--R r DEF1_RABIT : 85- 93: rvnga RyvrCcsr-R DEF1_RABIT : 88- 93: garyv Rc--Csr--R DEF2_MOUSE : 2- 9: l RdlvCyc--R trgck DEF2_MOUSE : 2- 11: l RdlvCycrtR gckrr DEF2_MOUSE : 9- 16: lvcyc RtrgCkr--R ermng DEF2_MOUSE : 9- 18: lvcyc RtrgCkrreR mngtc DEF2_MOUSE : 11- 16: cycrt Rg--Ckr--R ermng DEF2_MOUSE : 11- 18: cycrt Rg--CkrreR mngtc DEF2_RABIT : 17- 24: syrer RigdCki--R gvrfp DEF2_RABIT : 27- 34: kirgv RfpfCcp--R DEF3_MOUSE : 2- 9: l RdlvCyc--R krgck DEF3_MOUSE : 2- 11: l RdlvCycrkR gckrr DEF3_MOUSE : 9- 16: lvcyc RkrgCkr--R ermng DEF3_MOUSE : 9- 18: lvcyc RkrgCkrreR mngtc DEF3_MOUSE : 11- 16: cycrk Rg--Ckr--R ermng DEF3_MOUSE : 11- 18: cycrk Rg--CkrreR mngtc DEF3_RABIT : 68- 75: vvcac RralClp--R errag DEF3_RABIT : 68- 77: vvcac RralClpreR ragfc DEF3_RABIT : 69- 75: vcacr Ral-Clp--R errag DEF3_RABIT : 69- 77: vcacr Ral-ClpreR ragfc DEF3_RABIT : 78- 85: lprer RagfCri--R grihp DEF3_RABIT : 78- 87: lprer RagfCrirgR ihplc DEF4_HUMAN : 61- 68: vsgst RgmvCsc--R lvfcr DEF4_RABIT : 68- 77: vvcac RralClpleR ragfc DEF4_RABIT : 69- 77: vcacr Ral-ClpleR ragfc DEF4_RABIT : 78- 85: lpler RagfCri--R grihp DEF4_RABIT : 78- 87: lpler RagfCrirgR ihplc DEF5_HUMAN : 62- 68: sgsqa Rat-Cyc--R tgrca DEF5_HUMAN : 68- 75: atcyc RtgrCat--R eslsg DEF5_MOUSE : 11- 18: licyc RirgCkr--R ervfg DEF5_MOUSE : 11- 20: licyc RirgCkrreR vfgtc DEF5_MOUSE : 13- 18: cycri Rg--Ckr--R ervfg DEF5_MOUSE : 13- 20: cycri Rg--CkrreR vfgtc DEF5_RABIT : 68- 77: vsctc RrfsCgfgeR asgsc DEF5_RABIT : 69- 77: sctcr Rfs-CgfgeR asgsc DEF5_RABIT : 88- 95: tvngv RhtlCcr--R DEF6_HUMAN : 68- 75: algst RaftChc--R rscys DEF6_HUMAN : 68- 76: algst RaftChcr-R scyst DEF6_RABIT : 68- 77: vfctc RgflCgsgeR asgsc DEF6_RABIT : 88- 95: tingv RhtlCcr--R DEF7_RABIT : 26- 33: rvnga RyvrCcs--R r DEF7_RABIT : 26- 34: rvnga RyvrCcsr-R DEF7_RABIT : 29- 34: garyv Rc--Csr--R DEFN_CAVPO : 63- 70: gagag RrciCtt--R tcrfp DEFN_CAVPO : 63- 70: gagag Rr--CicttR tcrfp DEFN_CAVPO : 64- 70: agagr Rci-Ctt--R tcrfp DEFN_CAVPO : 70- 77: cictt Rt--CrfpyR rlgtc DEFN_CAVPO : 78- 87: rfpyr RlgtCifqnR vytfc DEFN_HUMAN : 69- 78: macyc RipaCiageR rygtc DEFN_HUMAN : 79- 88: iager RygtCiyqgR lwafc L 12: 8.3401 16( 16) C-C Occurences: 16(16) DEF1_MOUSE : 91- 92: llytl CC r DEF1_RABIT : 89- 90: aryvr CC srr DEF2_MOUSE : 33- 34: lmytl CC r DEF2_RABIT : 31- 32: vrfpf CC pr DEF3_MOUSE : 33- 34: lmytl CC r DEF3_RABIT : 92- 93: rihpl CC rr DEF4_HUMAN : 92- 93: vsfty CC trvd DEF4_RABIT : 92- 93: rihpl CC rr DEF5_HUMAN : 92- 93: rlyrl CC r DEF5_MOUSE : 35- 36: ltfvf CC DEF5_RABIT : 92- 93: vrhtl CC rr DEF6_HUMAN : 98- 99: inhrf CC l DEF6_RABIT : 92- 93: vrhtl CC rr DEF7_RABIT : 30- 31: aryvr CC srr DEFN_CAVPO : 92- 93: rvytf CC DEFN_HUMAN : 93- 94: rlwaf CC M 13: 8.3401 33( 16) C-R Occurences: 33(16) DEF1_MOUSE : 66- 67: dlvcy CR srgck DEF1_MOUSE : 81- 82: rmngt CR kghll DEF1_MOUSE : 92- 93: lytlc CR DEF1_RABIT : 64- 65: kgica CR rrfcp DEF1_RABIT : 79- 80: rfsgy CR vngar DEF2_MOUSE : 8- 9: dlvcy CR trgck DEF2_MOUSE : 23- 24: rmngt CR kghlm DEF2_MOUSE : 34- 35: mytlc CR DEF2_RABIT : 5- 6: grcv CR kqllc DEF3_MOUSE : 8- 9: dlvcy CR krgck DEF3_MOUSE : 23- 24: rmngt CR kghlm DEF3_MOUSE : 34- 35: mytlc CR DEF3_RABIT : 67- 68: gvvca CR ralcl DEF3_RABIT : 82- 83: rragf CR irgri DEF3_RABIT : 93- 94: ihplc CR r DEF4_HUMAN : 67- 68: gmvcs CR lvfcr DEF4_HUMAN : 72- 73: crlvf CR rtelr DEF4_RABIT : 67- 68: gvvca CR ralcl DEF4_RABIT : 82- 83: rragf CR irgri DEF4_RABIT : 93- 94: ihplc CR r DEF5_HUMAN : 67- 68: ratcy CR tgrca DEF5_HUMAN : 93- 94: lyrlc CR DEF5_MOUSE : 10- 11: klicy CR irgck DEF5_MOUSE : 25- 26: rvfgt CR nlflt DEF5_RABIT : 67- 68: gvsct CR rfscg DEF5_RABIT : 93- 94: rhtlc CR r DEF6_HUMAN : 74- 75: aftch CR rscys DEF6_RABIT : 67- 68: gvfct CR gflcg DEF6_RABIT : 93- 94: rhtlc CR r DEF7_RABIT : 5- 6: gica CR rrfcl DEF7_RABIT : 20- 21: qfsgy CR vngar DEFN_CAVPO : 72- 73: cttrt CR fpyrr DEFN_HUMAN : 68- 69: nmacy CR ipaci N 14: 8.3401 20( 16) G-x-C Occurences: 20(16) DEF1_MOUSE : 79- 81: rermn GtC rkghl DEF1_RABIT : 60- 62: vpdtk GiC acrrr DEF1_RABIT : 77- 79: serfs GyC rvnga DEF2_MOUSE : 21- 23: rermn GtC rkghl DEF2_RABIT : 1- 3: GrC vcrkq DEF2_RABIT : 19- 21: rerri GdC kirgv DEF3_MOUSE : 21- 23: rermn GtC rkghl DEF3_RABIT : 80- 82: rerra GfC rirgr DEF4_HUMAN : 80- 82: telrv GnC liggv DEF4_RABIT : 80- 82: lerra GfC rirgr DEF5_HUMAN : 70- 72: cycrt GrC atres DEF5_HUMAN : 80- 82: resls GvC eisgr DEF5_MOUSE : 23- 25: rervf GtC rnlfl DEF5_RABIT : 80- 82: geras GsC tvngv DEF6_HUMAN : 86- 88: teysy GtC tvmgi DEF6_RABIT : 80- 82: geras GsC tingv DEF7_RABIT : 1- 3: GiC acrrr DEF7_RABIT : 18- 20: feqfs GyC rvnga DEFN_CAVPO : 80- 82: pyrrl GtC ifqnr DEFN_HUMAN : 81- 83: gerry GtC iyqgr O 15: 7.8401 57( 16) C-x(1,2)-R Occurences: 57(16) DEF1_MOUSE : 64- 67: lrdlv CycR srgck DEF1_MOUSE : 66- 69: dlvcy CrsR gckgr DEF1_MOUSE : 71- 74: crsrg CkgR ermng DEF1_MOUSE : 91- 93: llytl Cc-R DEF1_RABIT : 62- 65: dtkgi CacR rrfcp DEF1_RABIT : 64- 66: kgica Cr-R rfcpn DEF1_RABIT : 64- 67: kgica CrrR fcpns DEF1_RABIT : 89- 92: aryvr CcsR r DEF1_RABIT : 90- 92: ryvrc Cs-R r DEF1_RABIT : 90- 93: ryvrc CsrR DEF2_MOUSE : 6- 9: lrdlv CycR trgck DEF2_MOUSE : 8- 11: dlvcy CrtR gckrr DEF2_MOUSE : 13- 15: crtrg Ck-R rermn DEF2_MOUSE : 13- 16: crtrg CkrR ermng DEF2_MOUSE : 33- 35: lmytl Cc-R DEF2_RABIT : 3- 6: gr CvcR kqllc DEF2_RABIT : 11- 14: rkqll CsyR errig DEF2_RABIT : 21- 24: rrigd CkiR gvrfp DEF2_RABIT : 31- 34: vrfpf CcpR DEF2_RABIT : 32- 34: rfpfc Cp-R DEF3_MOUSE : 6- 9: lrdlv CycR krgck DEF3_MOUSE : 8- 11: dlvcy CrkR gckrr DEF3_MOUSE : 13- 15: crkrg Ck-R rermn DEF3_MOUSE : 13- 16: crkrg CkrR ermng DEF3_MOUSE : 33- 35: lmytl Cc-R DEF3_RABIT : 65- 68: kagvv CacR ralcl DEF3_RABIT : 67- 69: gvvca Cr-R alclp DEF3_RABIT : 72- 75: crral ClpR errag DEF3_RABIT : 82- 85: rragf CriR grihp DEF3_RABIT : 92- 94: rihpl Cc-R r DEF3_RABIT : 92- 95: rihpl CcrR DEF3_RABIT : 93- 95: ihplc Cr-R DEF4_HUMAN : 65- 68: trgmv CscR lvfcr DEF4_HUMAN : 72- 74: crlvf Cr-R telrv DEF4_HUMAN : 92- 95: vsfty CctR vd DEF4_HUMAN : 93- 95: sftyc Ct-R vd DEF4_RABIT : 65- 68: kagvv CacR ralcl DEF4_RABIT : 67- 69: gvvca Cr-R alclp DEF4_RABIT : 82- 85: rragf CriR grihp DEF4_RABIT : 92- 94: rihpl Cc-R r DEF4_RABIT : 92- 95: rihpl CcrR DEF4_RABIT : 93- 95: ihplc Cr-R DEF5_HUMAN : 65- 68: qarat CycR tgrca DEF5_HUMAN : 72- 75: crtgr CatR eslsg DEF5_HUMAN : 92- 94: rlyrl Cc-R DEF5_MOUSE : 8- 11: akkli CycR irgck DEF5_MOUSE : 10- 13: klicy CriR gckrr DEF5_MOUSE : 15- 17: crirg Ck-R rervf DEF5_MOUSE : 15- 18: crirg CkrR ervfg DEF5_RABIT : 65- 68: kagvs CtcR rfscg DEF5_RABIT : 67- 69: gvsct Cr-R fscgf DEF5_RABIT : 92- 94: vrhtl Cc-R r DEF5_RABIT : 92- 95: vrhtl CcrR DEF5_RABIT : 93- 95: rhtlc Cr-R DEF6_HUMAN : 72- 75: traft ChcR rscys DEF6_HUMAN : 74- 76: aftch Cr-R scyst DEF6_RABIT : 65- 68: kagvf CtcR gflcg DEF6_RABIT : 92- 94: vrhtl Cc-R r DEF6_RABIT : 92- 95: vrhtl CcrR DEF6_RABIT : 93- 95: rhtlc Cr-R DEF7_RABIT : 3- 6: gi CacR rrfcl DEF7_RABIT : 5- 7: gica Cr-R rfcln DEF7_RABIT : 5- 8: gica CrrR fclnf DEF7_RABIT : 30- 33: aryvr CcsR r DEF7_RABIT : 31- 33: ryvrc Cs-R r DEF7_RABIT : 31- 34: ryvrc CsrR DEFN_CAVPO : 67- 70: grrci CttR tcrfp DEFN_HUMAN : 66- 69: rknma CycR ipaci P 16: 7.8401 33( 16) R-x(1,2)-G Occurences: 33(16) DEF1_MOUSE : 67- 70: lvcyc RsrG ckgre DEF1_MOUSE : 76- 79: ckgre RmnG tcrkg DEF1_MOUSE : 82- 84: mngtc Rk-G hllyt DEF1_RABIT : 74- 77: cpnse RfsG ycrvn DEF1_RABIT : 80- 83: fsgyc RvnG aryvr DEF2_MOUSE : 9- 12: lvcyc RtrG ckrre DEF2_MOUSE : 18- 21: ckrre RmnG tcrkg DEF2_MOUSE : 24- 26: mngtc Rk-G hlmyt DEF2_RABIT : 16- 19: csyre RriG dckir DEF2_RABIT : 17- 19: syrer Ri-G dckir DEF3_MOUSE : 9- 12: lvcyc RkrG ckrre DEF3_MOUSE : 18- 21: ckrre RmnG tcrkg DEF3_MOUSE : 24- 26: mngtc Rk-G hlmyt DEF3_RABIT : 77- 80: clpre RraG fcrir DEF3_RABIT : 78- 80: lprer Ra-G fcrir DEF3_RABIT : 83- 86: ragfc RirG rihpl DEF4_HUMAN : 18- 20: valqv Ra-G plqar DEF4_HUMAN : 78- 80: rrtel Rv-G nclig DEF4_RABIT : 77- 80: clple RraG fcrir DEF4_RABIT : 78- 80: lpler Ra-G fcrir DEF4_RABIT : 83- 86: ragfc RirG rihpl DEF5_HUMAN : 55- 58: glsal RtsG sqara DEF5_HUMAN : 68- 70: atcyc Rt-G rcatr DEF5_MOUSE : 11- 14: licyc RirG ckrre DEF5_MOUSE : 20- 23: ckrre RvfG tcrnl DEF5_RABIT : 77- 80: cgfge RasG sctvn DEF6_HUMAN : 62- 65: asssl RalG straf DEF6_RABIT : 77- 80: cgsge RasG sctin DEF7_RABIT : 21- 24: fsgyc RvnG aryvr DEFN_CAVPO : 77- 80: crfpy RrlG tcifq DEFN_CAVPO : 78- 80: rfpyr Rl-G tcifq DEFN_HUMAN : 78- 81: ciage RryG tciyq DEFN_HUMAN : 79- 81: iager Ry-G tciyq Q 17: 7.8401 24( 16) R-x(1,2)-L Occurences: 24(16) DEF1_MOUSE : 60- 62: qeesl Rd-L vcycr DEF1_RABIT : 2- 4: m Rt-L illaa DEF2_MOUSE : 2- 4: l Rd-L vcycr DEF2_RABIT : 6- 9: grcvc RkqL lcsyr DEF3_MOUSE : 2- 4: l Rd-L vcycr DEF3_RABIT : 2- 4: m Rt-L allaa DEF3_RABIT : 68- 71: vvcac RraL clpre DEF3_RABIT : 69- 71: vcacr Ra-L clpre DEF4_HUMAN : 74- 77: lvfcr RteL rvgnc DEF4_RABIT : 2- 4: m Rt-L allaa DEF4_RABIT : 68- 71: vvcac RraL clple DEF4_RABIT : 69- 71: vcacr Ra-L clple DEF5_HUMAN : 75- 78: grcat ResL sgvce DEF5_MOUSE : 26- 28: vfgtc Rn-L fltfv DEF5_RABIT : 2- 4: m Rt-L allaa DEF5_RABIT : 88- 91: tvngv RhtL ccrr DEF6_HUMAN : 2- 4: m Rt-L tilta DEF6_HUMAN : 62- 64: asssl Ra-L gstra DEF6_RABIT : 2- 4: m Rt-L allaa DEF6_RABIT : 68- 71: vfctc RgfL cgsge DEF6_RABIT : 88- 91: tingv RhtL ccrr DEF7_RABIT : 8- 11: cacrr RfcL nfeqf DEFN_CAVPO : 77- 79: crfpy Rr-L gtcif DEFN_HUMAN : 2- 4: m Rt-L ailaa R 18: 7.3401 44( 16) R-x(0,2)-R Occurences: 44(16) DEF1_MOUSE : 67- 69: lvcyc Rs-R gckgr DEF1_MOUSE : 74- 76: rgckg Re-R mngtc DEF1_RABIT : 65- 66: gicac R--R rfcpn DEF1_RABIT : 65- 67: gicac Rr-R fcpns DEF1_RABIT : 66- 67: icacr R--R fcpns DEF1_RABIT : 85- 88: rvnga RyvR ccsrr DEF1_RABIT : 92- 93: vrccs R--R DEF2_MOUSE : 9- 11: lvcyc Rt-R gckrr DEF2_MOUSE : 15- 16: trgck R--R ermng DEF2_MOUSE : 15- 18: trgck RreR mngtc DEF2_MOUSE : 16- 18: rgckr Re-R mngtc DEF2_RABIT : 14- 16: llcsy Re-R rigdc DEF2_RABIT : 14- 17: llcsy RerR igdck DEF2_RABIT : 16- 17: csyre R--R igdck DEF2_RABIT : 24- 27: gdcki RgvR fpfcc DEF3_MOUSE : 9- 11: lvcyc Rk-R gckrr DEF3_MOUSE : 15- 16: krgck R--R ermng DEF3_MOUSE : 15- 18: krgck RreR mngtc DEF3_MOUSE : 16- 18: rgckr Re-R mngtc DEF3_RABIT : 68- 69: vvcac R--R alclp DEF3_RABIT : 75- 77: alclp Re-R ragfc DEF3_RABIT : 75- 78: alclp RerR agfcr DEF3_RABIT : 77- 78: clpre R--R agfcr DEF3_RABIT : 83- 85: ragfc Ri-R grihp DEF3_RABIT : 85- 87: gfcri Rg-R ihplc DEF3_RABIT : 94- 95: hplcc R--R DEF4_HUMAN : 73- 74: rlvfc R--R telrv DEF4_RABIT : 68- 69: vvcac R--R alclp DEF4_RABIT : 77- 78: clple R--R agfcr DEF4_RABIT : 83- 85: ragfc Ri-R grihp DEF4_RABIT : 85- 87: gfcri Rg-R ihplc DEF4_RABIT : 94- 95: hplcc R--R DEF5_HUMAN : 68- 71: atcyc RtgR catre DEF5_HUMAN : 87- 90: ceisg RlyR lccr DEF5_MOUSE : 11- 13: licyc Ri-R gckrr DEF5_MOUSE : 17- 18: irgck R--R ervfg DEF5_MOUSE : 17- 20: irgck RreR vfgtc DEF5_MOUSE : 18- 20: rgckr Re-R vfgtc DEF5_RABIT : 68- 69: vsctc R--R fscgf DEF5_RABIT : 94- 95: htlcc R--R DEF6_HUMAN : 75- 76: ftchc R--R scyst DEF6_RABIT : 94- 95: htlcc R--R DEF7_RABIT : 6- 7: gicac R--R rfcln DEF7_RABIT : 6- 8: gicac Rr-R fclnf DEF7_RABIT : 7- 8: icacr R--R fclnf DEF7_RABIT : 26- 29: rvnga RyvR ccsrr DEF7_RABIT : 33- 34: vrccs R--R DEFN_CAVPO : 63- 64: gagag R--R cictt DEFN_CAVPO : 70- 73: cictt RtcR fpyrr DEFN_CAVPO : 77- 78: crfpy R--R lgtci DEFN_HUMAN : 78- 79: ciage R--R ygtci S 19: 7.3401 33( 16) G-x(1,3)-R Occurences: 33(16) DEF1_MOUSE : 70- 74: ycrsr GckgR ermng DEF1_MOUSE : 73- 76: srgck Gre-R mngtc DEF1_MOUSE : 79- 82: rermn Gtc-R kghll DEF1_RABIT : 77- 80: serfs Gyc-R vngar DEF1_RABIT : 83- 85: ycrvn Ga--R yvrcc DEF2_MOUSE : 12- 15: ycrtr Gck-R rermn DEF2_MOUSE : 12- 16: ycrtr GckrR ermng DEF2_MOUSE : 21- 24: rermn Gtc-R kghlm DEF2_RABIT : 25- 27: dckir Gv--R fpfcc DEF3_MOUSE : 12- 15: ycrkr Gck-R rermn DEF3_MOUSE : 12- 16: ycrkr GckrR ermng DEF3_MOUSE : 21- 24: rermn Gtc-R kghlm DEF3_RABIT : 80- 83: rerra Gfc-R irgri DEF4_HUMAN : 31- 35: gdeap GqeqR gpedq DEF4_HUMAN : 58- 61: alqvs Gst-R gmvcs DEF4_RABIT : 80- 83: lerra Gfc-R irgri DEF5_HUMAN : 58- 62: alrts GsqaR atcyc DEF5_HUMAN : 86- 90: vceis GrlyR lccr DEF5_MOUSE : 14- 17: ycrir Gck-R rervf DEF5_MOUSE : 14- 18: ycrir GckrR ervfg DEF5_MOUSE : 23- 26: rervf Gtc-R nlflt DEF5_RABIT : 73- 77: rrfsc GfgeR asgsc DEF5_RABIT : 75- 77: fscgf Ge--R asgsc DEF5_RABIT : 86- 88: sctvn Gv--R htlcc DEF6_HUMAN : 65- 68: slral Gst-R aftch DEF6_HUMAN : 92- 96: tctvm GinhR fccl DEF6_RABIT : 73- 77: rgflc GsgeR asgsc DEF6_RABIT : 75- 77: flcgs Ge--R asgsc DEF6_RABIT : 86- 88: sctin Gv--R htlcc DEF7_RABIT : 18- 21: feqfs Gyc-R vngar DEF7_RABIT : 24- 26: ycrvn Ga--R yvrcc DEFN_CAVPO : 35- 37: dtkmk Gd--R edhva DEFN_CAVPO : 60- 63: edaga Gag-R rcict DEFN_CAVPO : 60- 64: edaga GagrR cictt DEFN_CAVPO : 62- 64: agaga Gr--R cictt DEFN_HUMAN : 59- 61: apkhp Gs--R knmac DEFN_HUMAN : 76- 78: pacia Ge--R rygtc DEFN_HUMAN : 76- 79: pacia Ger-R ygtci Number of patterns evaluated by Pratt:44 Total running time: 0 seconds