------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 13 sequences from file DEATH_DOMAIN PATTERN CONSERVATION: CM: min Nr of Seqs to Match 13 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 50 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename DEATH_DOMAIN.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: ANK1_HUMAN 1880 ANK1_MOUSE 1862 ANKC_HUMAN 1839 FASA_HUMAN 335 FASA_MOUSE 327 KPEL_DROME 501 MY88_MOUSE 243 NGFR_CHICK 416 NGFR_HUMAN 427 NGFR_RAT 425 TNR1_HUMAN 455 TNR1_MOUSE 454 TNR1_RAT 461 Pratt run started at Thu Feb 6 19:17:34 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 12.0102 30( 13) L-x(3)-L-x(0,1)-L 2: 12.0102 39( 13) L-x(2,3)-L-x-L 3: 12.0102 25( 13) L-x(2)-L-x(2,3)-I 4: 12.0102 41( 13) L-L-x(1,2)-L 5: 12.0102 67( 13) L-L-x(0,1)-L 6: 12.0102 44( 13) L-x(0,1)-L-x-L 7: 12.0102 33( 13) L-x(2)-L-x(2,3)-L 8: 12.0102 26( 13) A-x(3,4)-L-x(3)-L 9: 11.5102 32( 13) A-x(0,1)-L-x(1,2)-L 10: 11.5102 27( 13) A-x(1,2)-L-x(1,2)-L 11: 11.5102 39( 13) L-x(2,3)-A-x(0,1)-L 12: 11.5102 31( 13) T-x(0,1)-L-x(2,3)-L 13: 11.5102 28( 13) T-x(1,3)-L-x(3)-L 14: 11.5102 34( 13) L-x-P-x(0,2)-V 15: 11.5102 34( 13) T-x(3)-L-x(1,3)-L 16: 11.5102 39( 13) T-x(3,4)-L-x(1,2)-L 17: 11.5102 30( 13) T-x(2,3)-L-x(0,1)-L 18: 11.5102 46( 13) L-x(1,2)-L-x(0,1)-V 19: 11.5102 23( 13) L-x(3)-L-x(2,4)-P 20: 11.5102 34( 13) L-x(3,5)-L-x(5)-L Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 13.1594 21( 13) T-x(2)-[AGILPV]-L-x(1,3)-L B 2: 13.1594 30( 13) L-x(1,2)-L-x(0,1)-V-x(4)-[AGILPV] C 3: 12.0102 30( 13) L-x(3)-L-x(0,1)-L D 4: 12.0102 39( 13) L-x(2,3)-L-x-L E 5: 12.0102 25( 13) L-x(2)-L-x(2,3)-I F 6: 12.0102 41( 13) L-L-x(1,2)-L G 7: 12.0102 67( 13) L-L-x(0,1)-L H 8: 12.0102 44( 13) L-x(0,1)-L-x-L I 9: 12.0102 33( 13) L-x(2)-L-x(2,3)-L J 10: 12.0102 26( 13) A-x(3,4)-L-x(3)-L K 11: 11.5102 32( 13) A-x(0,1)-L-x(1,2)-L L 12: 11.5102 27( 13) A-x(1,2)-L-x(1,2)-L M 13: 11.5102 39( 13) L-x(2,3)-A-x(0,1)-L N 14: 11.5102 31( 13) T-x(0,1)-L-x(2,3)-L O 15: 11.5102 28( 13) T-x(1,3)-L-x(3)-L P 16: 11.5102 34( 13) L-x-P-x(0,2)-V Q 17: 11.5102 39( 13) T-x(3,4)-L-x(1,2)-L R 18: 11.5102 30( 13) T-x(2,3)-L-x(0,1)-L S 19: 11.5102 23( 13) L-x(3)-L-x(2,4)-P T 20: 11.5102 34( 13) L-x(3,5)-L-x(5)-L Best patterns with alignements: fitness hits(seqs) Pattern A 1: 13.1594 21( 13) T-x(2)-[AGILPV]-L-x(1,3)-L Occurences: 21(13) ANK1_HUMAN : 400- 407: sidav TesGLtp-L hvasf ANK1_HUMAN : 1351- 1358: mkyed TqhILch-L nitmp ANK1_HUMAN : 1377- 1383: edrrr TptPLa--L rysil ANK1_MOUSE : 397- 404: sidav TesGLtp-L hvasf ANK1_MOUSE : 1348- 1355: mkyed TqhILch-L nitmp ANK1_MOUSE : 1374- 1380: edrrr TltPLt--L rysil ANKC_HUMAN : 296- 303: qidak TrdGLtp-L hcaar ANKC_HUMAN : 329- 336: pllar TknGLsp-L hmaaq ANKC_HUMAN : 692- 699: nihms TksGLts-L hlaaq FASA_HUMAN : 6- 12: mlgiw TllPLv--L tsvar FASA_MOUSE : 174- 182: rlwll TilVLlipL vfiyr KPEL_DROME : 100- 108: nhtvq TlfALfkkL klhna MY88_MOUSE : 184- 190: ecdfq TkfALs--L spgvq NGFR_CHICK : 386- 394: aketa TldALlvaL rkiqr NGFR_HUMAN : 397- 405: tqdsa TldALlaaL rriqr NGFR_RAT : 395- 403: aqdsa TldALlaaL rriqr TNR1_HUMAN : 210- 216: tedsg TtvLLp--L viffg TNR1_HUMAN : 417- 425: prrea TleLLgrvL rdmdl TNR1_MOUSE : 5- 11: mglp TvpGLl--L slvll TNR1_MOUSE : 5- 13: mglp TvpGLllsL vllal TNR1_MOUSE : 211- 217: pqdsg TavLLp--L villg TNR1_RAT : 210- 216: pqdsg TavLLp--L viflg B 2: 13.1594 30( 13) L-x(1,2)-L-x(0,1)-V-x(4)-[AGILPV] Occurences: 30(13) ANK1_HUMAN : 338- 348: itldh LtpLhVaahcG hhrva ANK1_HUMAN : 404- 414: vtesg LtpLhVasfmG hlpiv ANK1_HUMAN : 1086- 1095: slksk LvpL-VqatfP enavt ANK1_HUMAN : 1617- 1625: pelgs Le-L-VeddtV dsdat ANK1_MOUSE : 335- 345: itldh LtpLhVaahcG hhrva ANK1_MOUSE : 401- 411: vtesg LtpLhVasfmG hlpiv ANK1_MOUSE : 1083- 1092: slrsk LvpL-VqatfP enavt ANKC_HUMAN : 366- 376: vtldy LtaLhVaahcG hyrvt FASA_HUMAN : 7- 16: lgiwt LlpL-VltsvA rlssk FASA_HUMAN : 8- 16: giwtl Lp-L-VltsvA rlssk FASA_MOUSE : 173- 182: nrlwl LtiL-VllipL vfiyr KPEL_DROME : 49- 59: qlcah LdaLdVwqqlA tavkl MY88_MOUSE : 136- 145: qtdyr Lk-LcVsdrdV lpgtc NGFR_CHICK : 387- 397: ketat LdaLlValrkI qrgdi NGFR_HUMAN : 18- 28: prlll LllLgVslggA keacp NGFR_HUMAN : 19- 28: rllll Ll-LgVslggA keacp NGFR_RAT : 19- 29: lrlll LliLgVssggA ketcs NGFR_RAT : 20- 29: rllll Li-LgVssggA ketcs TNR1_HUMAN : 10- 19: tvpdl LlpL-VllelL vgiyp TNR1_HUMAN : 11- 19: vpdll Lp-L-VllelL vgiyp TNR1_HUMAN : 213- 222: sgttv LlpL-ViffgL cllsl TNR1_HUMAN : 214- 222: gttvl Lp-L-ViffgL cllsl TNR1_MOUSE : 10- 19: tvpgl LlsL-VllalL mgihp TNR1_MOUSE : 11- 19: vpgll Ls-L-VllalL mgihp TNR1_MOUSE : 214- 223: sgtav LlpL-VillgL cllsf TNR1_MOUSE : 215- 223: gtavl Lp-L-VillgL cllsf TNR1_RAT : 10- 19: ivpgl LlsL-VllalL mgihp TNR1_RAT : 11- 19: vpgll Ls-L-VllalL mgihp TNR1_RAT : 213- 222: sgtav LlpL-ViflgL cllff TNR1_RAT : 214- 222: gtavl Lp-L-ViflgL cllff C 3: 12.0102 30( 13) L-x(3)-L-x(0,1)-L Occurences: 30(13) ANK1_HUMAN : 715- 720: ygnik LvkfL-L qhqad ANK1_HUMAN : 1116- 1121: pvpde LvtkL-L gnqat ANK1_HUMAN : 1516- 1521: ngyss LqdeL-L spasl ANK1_MOUSE : 547- 552: ygkvr LaelL-L ehdah ANK1_MOUSE : 712- 717: ygnik LvkfL-L qhqad ANK1_MOUSE : 1113- 1118: pvpde LvtkL-L gnqat ANK1_MOUSE : 1513- 1518: ngyss LqdeL-L spasl ANKC_HUMAN : 79- 84: eghvg LvqeL-L grgss ANKC_HUMAN : 444- 449: afmgh LnivL-L llqng ANKC_HUMAN : 444- 450: afmgh LnivLlL lqnga FASA_HUMAN : 177- 182: snlgw LcllL-L pipli FASA_MOUSE : 172- 178: rnrlw LltiLvL liplv KPEL_DROME : 104- 110: qtlfa LfkkLkL hnamr MY88_MOUSE : 36- 42: asvgr LlelLaL ldred MY88_MOUSE : 236- 242: wfwtr LakaLsL p NGFR_CHICK : 7- 12: agfvp LlllL-L pagpt NGFR_HUMAN : 15- 20: mdgpr LlllL-L lgvsl NGFR_HUMAN : 15- 21: mdgpr LlllLlL gvslg NGFR_HUMAN : 16- 21: dgprl LlllL-L gvslg NGFR_RAT : 14- 19: samdr LrllL-L lilgv NGFR_RAT : 14- 20: samdr LrllLlL ilgvs NGFR_RAT : 16- 22: mdrlr LlllLiL gvssg NGFR_RAT : 336- 342: kgdgn LyssLpL tkree TNR1_HUMAN : 9- 15: stvpd LllpLvL lellv TNR1_HUMAN : 11- 16: vpdll LplvL-L ellvg TNR1_MOUSE : 9- 15: ptvpg LllsLvL lallm TNR1_MOUSE : 11- 16: vpgll LslvL-L allmg TNR1_MOUSE : 217- 223: avllp LvilLgL cllsf TNR1_MOUSE : 221- 226: plvil LglcL-L sfifi TNR1_RAT : 9- 15: pivpg LllsLvL lallm TNR1_RAT : 11- 16: vpgll LslvL-L allmg TNR1_RAT : 216- 222: avllp LvifLgL cllff TNR1_RAT : 220- 225: plvif LglcL-L ffici D 4: 12.0102 39( 13) L-x(2,3)-L-x-L Occurences: 39(13) ANK1_HUMAN : 45- 50: cnqng Lng-LhL askeg ANK1_HUMAN : 668- 673: gnksg Ltp-LhL vaqeg ANK1_HUMAN : 1614- 1619: prgpe Lgs-LeL veddt ANK1_MOUSE : 42- 47: cnqng Lng-LhL askeg ANK1_MOUSE : 547- 552: ygkvr Lae-LlL ehdah ANK1_MOUSE : 665- 670: gnksg Ltp-LhL vsqeg ANK1_MOUSE : 1375- 1380: drrrt Ltp-LtL rysil ANKC_HUMAN : 65- 70: cnqng Lna-LhL aakeg ANKC_HUMAN : 444- 450: afmgh LnivLlL lqnga ANKC_HUMAN : 696- 701: stksg Lts-LhL aaqed FASA_HUMAN : 7- 12: lgiwt Llp-LvL tsvar FASA_HUMAN : 174- 179: gsrsn Lgw-LcL lllpi FASA_HUMAN : 177- 182: snlgw Lcl-LlL pipli FASA_MOUSE : 172- 178: rnrlw LltiLvL liplv FASA_MOUSE : 173- 178: nrlwl Lti-LvL liplv KPEL_DROME : 104- 110: qtlfa LfkkLkL hnamr MY88_MOUSE : 36- 42: asvgr LlelLaL ldred MY88_MOUSE : 37- 42: svgrl Lel-LaL ldred MY88_MOUSE : 236- 242: wfwtr LakaLsL p NGFR_CHICK : 7- 12: agfvp Lll-LlL pagpt NGFR_HUMAN : 15- 20: mdgpr Lll-LlL lgvsl NGFR_HUMAN : 15- 21: mdgpr LlllLlL gvslg NGFR_HUMAN : 16- 21: dgprl Lll-LlL gvslg NGFR_RAT : 14- 19: samdr Lrl-LlL lilgv NGFR_RAT : 14- 20: samdr LrllLlL ilgvs NGFR_RAT : 16- 22: mdrlr LlllLiL gvssg NGFR_RAT : 17- 22: drlrl Lll-LiL gvssg NGFR_RAT : 336- 342: kgdgn LyssLpL tkree TNR1_HUMAN : 9- 15: stvpd LllpLvL lellv TNR1_HUMAN : 10- 15: tvpdl Llp-LvL lellv TNR1_HUMAN : 13- 18: dlllp Lvl-LeL lvgiy TNR1_HUMAN : 222- 227: viffg Lcl-LsL lfigl TNR1_MOUSE : 9- 15: ptvpg LllsLvL lallm TNR1_MOUSE : 10- 15: tvpgl Lls-LvL lallm TNR1_MOUSE : 13- 18: gllls Lvl-LaL lmgih TNR1_MOUSE : 217- 223: avllp LvilLgL cllsf TNR1_MOUSE : 220- 225: lplvi Llg-LcL lsfif TNR1_RAT : 9- 15: pivpg LllsLvL lallm TNR1_RAT : 10- 15: ivpgl Lls-LvL lallm TNR1_RAT : 13- 18: gllls Lvl-LaL lmgih TNR1_RAT : 216- 222: avllp LvifLgL cllff E 5: 12.0102 25( 13) L-x(2)-L-x(2,3)-I Occurences: 25(13) ANK1_HUMAN : 1169- 1176: gdtts LrlLcsvI ggtdq ANK1_HUMAN : 1449- 1455: eqsva LlnLwv-I regqn ANK1_MOUSE : 1166- 1173: gdtts LrlLcsvI ggtdq ANKC_HUMAN : 1225- 1231: gdapt LrlLcs-I tggtt FASA_HUMAN : 177- 184: snlgw LclLllpI plivw FASA_HUMAN : 303- 310: lkkan LctLaekI qtiil FASA_MOUSE : 173- 180: nrlwl LtiLvllI plvfi FASA_MOUSE : 179- 185: tilvl LipLvf-I yrkyr KPEL_DROME : 180- 186: eeips LesLgn-I histv KPEL_DROME : 263- 269: qsyne LkyLns-I rhdni MY88_MOUSE : 49- 56: dredi LkeLksrI eedcq NGFR_CHICK : 391- 397: tldal LvaLrk-I qrgdi NGFR_HUMAN : 402- 408: tldal LaaLrr-I qradl NGFR_RAT : 14- 21: samdr LrlLlllI lgvss NGFR_RAT : 400- 406: tldal LaaLrr-I qradi TNR1_HUMAN : 15- 22: llplv LleLlvgI ypsgv TNR1_HUMAN : 16- 22: lplvl LelLvg-I ypsgv TNR1_HUMAN : 224- 230: ffglc LlsLlf-I glmyr TNR1_HUMAN : 431- 437: rdmdl LgcLed-I eealc TNR1_MOUSE : 15- 22: llslv LlaLlmgI hpsgv TNR1_MOUSE : 16- 22: lslvl LalLmg-I hpsgv TNR1_MOUSE : 223- 229: villg LclLsf-I fislm TNR1_RAT : 15- 22: llslv LlaLlmgI hpsgv TNR1_RAT : 16- 22: lslvl LalLmg-I hpsgv TNR1_RAT : 222- 228: viflg LclLff-I cisll F 6: 12.0102 41( 13) L-L-x(1,2)-L Occurences: 41(13) ANK1_HUMAN : 1449- 1452: eqsva LLn-L wvire ANK1_MOUSE : 1446- 1449: dqsta LLt-L wvdre ANKC_HUMAN : 448- 451: hlniv LLl-L qngas ANKC_HUMAN : 613- 616: nqkva LLl-L ekgas FASA_HUMAN : 7- 10: lgiwt LLp-L vltsv FASA_HUMAN : 179- 182: lgwlc LLl-L pipli FASA_MOUSE : 172- 176: rnrlw LLtiL vllip FASA_MOUSE : 178- 182: ltilv LLipL vfiyr KPEL_DROME : 36- 39: tmair LLp-L pvraq MY88_MOUSE : 36- 39: asvgr LLe-L lalld MY88_MOUSE : 36- 40: asvgr LLelL alldr MY88_MOUSE : 39- 42: grlle LLa-L ldred MY88_MOUSE : 39- 43: grlle LLalL dredi NGFR_CHICK : 7- 10: agfvp LLl-L llpag NGFR_CHICK : 7- 11: agfvp LLllL lpagp NGFR_CHICK : 8- 11: gfvpl LLl-L lpagp NGFR_CHICK : 8- 12: gfvpl LLllL pagpt NGFR_CHICK : 9- 12: fvpll LLl-L pagpt NGFR_CHICK : 390- 394: atlda LLvaL rkiqr NGFR_HUMAN : 15- 18: mdgpr LLl-L lllgv NGFR_HUMAN : 15- 19: mdgpr LLllL llgvs NGFR_HUMAN : 16- 19: dgprl LLl-L llgvs NGFR_HUMAN : 16- 20: dgprl LLllL lgvsl NGFR_HUMAN : 17- 20: gprll LLl-L lgvsl NGFR_HUMAN : 17- 21: gprll LLllL gvslg NGFR_HUMAN : 18- 21: prlll LLl-L gvslg NGFR_HUMAN : 401- 405: atlda LLaaL rriqr NGFR_RAT : 16- 19: mdrlr LLl-L lilgv NGFR_RAT : 16- 20: mdrlr LLllL ilgvs NGFR_RAT : 17- 20: drlrl LLl-L ilgvs NGFR_RAT : 18- 22: rlrll LLliL gvssg NGFR_RAT : 19- 22: lrlll LLi-L gvssg NGFR_RAT : 399- 403: atlda LLaaL rriqr TNR1_HUMAN : 9- 13: stvpd LLlpL vllel TNR1_HUMAN : 10- 13: tvpdl LLp-L vllel TNR1_HUMAN : 15- 18: llplv LLe-L lvgiy TNR1_HUMAN : 15- 19: llplv LLelL vgiyp TNR1_HUMAN : 213- 216: sgttv LLp-L viffg TNR1_HUMAN : 224- 227: ffglc LLs-L lfigl TNR1_HUMAN : 224- 228: ffglc LLslL figlm TNR1_HUMAN : 430- 434: lrdmd LLgcL ediee TNR1_MOUSE : 9- 13: ptvpg LLlsL vllal TNR1_MOUSE : 10- 13: tvpgl LLs-L vllal TNR1_MOUSE : 15- 18: llslv LLa-L lmgih TNR1_MOUSE : 15- 19: llslv LLalL mgihp TNR1_MOUSE : 214- 217: sgtav LLp-L villg TNR1_MOUSE : 220- 223: lplvi LLg-L cllsf TNR1_RAT : 9- 13: pivpg LLlsL vllal TNR1_RAT : 10- 13: ivpgl LLs-L vllal TNR1_RAT : 15- 18: llslv LLa-L lmgih TNR1_RAT : 15- 19: llslv LLalL mgihp TNR1_RAT : 213- 216: sgtav LLp-L viflg TNR1_RAT : 384- 387: kefmr LLg-L sehei G 7: 12.0102 67( 13) L-L-x(0,1)-L Occurences: 67(13) ANK1_HUMAN : 223- 225: lnvaq LL-L nrgas ANK1_HUMAN : 256- 258: vimvr LL-L drgaq ANK1_HUMAN : 322- 324: ldcvr LL-L qydae ANK1_HUMAN : 388- 390: vrvme LL-L ktgas ANK1_HUMAN : 487- 489: tnmvk LL-L ennan ANK1_HUMAN : 553- 555: vrvae LL-L erdah ANK1_HUMAN : 586- 588: ldivk LL-L prggs ANK1_HUMAN : 652- 654: aemva LL-L skqan ANK1_HUMAN : 751- 753: tdivt LL-L kngas ANK1_HUMAN : 1449- 1452: eqsva LLnL wvire ANK1_MOUSE : 220- 222: lnvaq LL-L nrgas ANK1_MOUSE : 253- 255: vimvr LL-L drgaq ANK1_MOUSE : 319- 321: ldcvr LL-L qynae ANK1_MOUSE : 385- 387: irvme LL-L ktgas ANK1_MOUSE : 484- 486: tgmvk LL-L engas ANK1_MOUSE : 550- 552: vrlae LL-L ehdah ANK1_MOUSE : 583- 585: ldivk LL-L prggs ANK1_MOUSE : 649- 651: temva LL-L skqan ANK1_MOUSE : 748- 750: tdivt LL-L kngas ANK1_MOUSE : 1446- 1449: dqsta LLtL wvdre ANKC_HUMAN : 210- 212: tksaa LL-L qndhn ANKC_HUMAN : 251- 253: vnvat LL-L nrgaa ANKC_HUMAN : 284- 286: tnmvk LL-L drggq ANKC_HUMAN : 317- 319: dqvve LL-L ergap ANKC_HUMAN : 383- 385: yrvtk LL-L dkran ANKC_HUMAN : 448- 450: hlniv LL-L lqnga ANKC_HUMAN : 448- 451: hlniv LLlL qngas ANKC_HUMAN : 449- 451: lnivl LL-L qngas ANKC_HUMAN : 515- 517: teivq LL-L qhmah ANKC_HUMAN : 581- 583: ldvak LL-L qrraa ANKC_HUMAN : 613- 615: nqkva LL-L lekga ANKC_HUMAN : 613- 616: nqkva LLlL ekgas ANKC_HUMAN : 614- 616: qkval LL-L ekgas ANKC_HUMAN : 680- 682: tdmvt LL-L dkgan FASA_HUMAN : 7- 10: lgiwt LLpL vltsv FASA_HUMAN : 179- 181: lgwlc LL-L lpipl FASA_HUMAN : 179- 182: lgwlc LLlL pipli FASA_HUMAN : 180- 182: gwlcl LL-L pipli FASA_MOUSE : 269- 271: eqkvq LL-L cwyqs KPEL_DROME : 36- 39: tmair LLpL pvraq MY88_MOUSE : 36- 39: asvgr LLeL lalld MY88_MOUSE : 39- 42: grlle LLaL ldred NGFR_CHICK : 7- 9: agfvp LL-L lllpa NGFR_CHICK : 7- 10: agfvp LLlL llpag NGFR_CHICK : 8- 10: gfvpl LL-L llpag NGFR_CHICK : 8- 11: gfvpl LLlL lpagp NGFR_CHICK : 9- 11: fvpll LL-L lpagp NGFR_CHICK : 9- 12: fvpll LLlL pagpt NGFR_CHICK : 10- 12: vplll LL-L pagpt NGFR_HUMAN : 15- 17: mdgpr LL-L llllg NGFR_HUMAN : 15- 18: mdgpr LLlL lllgv NGFR_HUMAN : 16- 18: dgprl LL-L lllgv NGFR_HUMAN : 16- 19: dgprl LLlL llgvs NGFR_HUMAN : 17- 19: gprll LL-L llgvs NGFR_HUMAN : 17- 20: gprll LLlL lgvsl NGFR_HUMAN : 18- 20: prlll LL-L lgvsl NGFR_HUMAN : 18- 21: prlll LLlL gvslg NGFR_HUMAN : 19- 21: rllll LL-L gvslg NGFR_RAT : 16- 18: mdrlr LL-L llilg NGFR_RAT : 16- 19: mdrlr LLlL lilgv NGFR_RAT : 17- 19: drlrl LL-L lilgv NGFR_RAT : 17- 20: drlrl LLlL ilgvs NGFR_RAT : 18- 20: rlrll LL-L ilgvs NGFR_RAT : 19- 22: lrlll LLiL gvssg TNR1_HUMAN : 9- 11: stvpd LL-L plvll TNR1_HUMAN : 10- 13: tvpdl LLpL vllel TNR1_HUMAN : 15- 18: llplv LLeL lvgiy TNR1_HUMAN : 213- 216: sgttv LLpL viffg TNR1_HUMAN : 224- 227: ffglc LLsL lfigl TNR1_MOUSE : 9- 11: ptvpg LL-L slvll TNR1_MOUSE : 10- 13: tvpgl LLsL vllal TNR1_MOUSE : 15- 18: llslv LLaL lmgih TNR1_MOUSE : 214- 217: sgtav LLpL villg TNR1_MOUSE : 220- 223: lplvi LLgL cllsf TNR1_RAT : 9- 11: pivpg LL-L slvll TNR1_RAT : 10- 13: ivpgl LLsL vllal TNR1_RAT : 15- 18: llslv LLaL lmgih TNR1_RAT : 213- 216: sgtav LLpL viflg TNR1_RAT : 384- 387: kefmr LLgL sehei H 8: 12.0102 44( 13) L-x(0,1)-L-x-L Occurences: 44(13) ANK1_HUMAN : 1449- 1452: eqsva L-LnL wvire ANK1_MOUSE : 1446- 1449: dqsta L-LtL wvdre ANKC_HUMAN : 448- 451: hlniv L-LlL qngas ANKC_HUMAN : 613- 616: nqkva L-LlL ekgas FASA_HUMAN : 7- 10: lgiwt L-LpL vltsv FASA_HUMAN : 8- 12: giwtl LpLvL tsvar FASA_HUMAN : 177- 181: snlgw LcLlL lpipl FASA_HUMAN : 179- 182: lgwlc L-LlL pipli FASA_MOUSE : 8- 12: wiwav LpLvL agsql KPEL_DROME : 36- 39: tmair L-LpL pvraq MY88_MOUSE : 36- 39: asvgr L-LeL lalld MY88_MOUSE : 39- 42: grlle L-LaL ldred NGFR_CHICK : 7- 10: agfvp L-LlL llpag NGFR_CHICK : 7- 11: agfvp LlLlL lpagp NGFR_CHICK : 8- 11: gfvpl L-LlL lpagp NGFR_CHICK : 8- 12: gfvpl LlLlL pagpt NGFR_CHICK : 9- 12: fvpll L-LlL pagpt NGFR_HUMAN : 15- 18: mdgpr L-LlL lllgv NGFR_HUMAN : 15- 19: mdgpr LlLlL llgvs NGFR_HUMAN : 16- 19: dgprl L-LlL llgvs NGFR_HUMAN : 16- 20: dgprl LlLlL lgvsl NGFR_HUMAN : 17- 20: gprll L-LlL lgvsl NGFR_HUMAN : 17- 21: gprll LlLlL gvslg NGFR_HUMAN : 18- 21: prlll L-LlL gvslg NGFR_RAT : 14- 18: samdr LrLlL llilg NGFR_RAT : 16- 19: mdrlr L-LlL lilgv NGFR_RAT : 16- 20: mdrlr LlLlL ilgvs NGFR_RAT : 17- 20: drlrl L-LlL ilgvs NGFR_RAT : 18- 22: rlrll LlLiL gvssg NGFR_RAT : 19- 22: lrlll L-LiL gvssg TNR1_HUMAN : 9- 13: stvpd LlLpL vllel TNR1_HUMAN : 10- 13: tvpdl L-LpL vllel TNR1_HUMAN : 11- 15: vpdll LpLvL lellv TNR1_HUMAN : 15- 18: llplv L-LeL lvgiy TNR1_HUMAN : 213- 216: sgttv L-LpL viffg TNR1_HUMAN : 224- 227: ffglc L-LsL lfigl TNR1_MOUSE : 9- 13: ptvpg LlLsL vllal TNR1_MOUSE : 10- 13: tvpgl L-LsL vllal TNR1_MOUSE : 11- 15: vpgll LsLvL lallm TNR1_MOUSE : 15- 18: llslv L-LaL lmgih TNR1_MOUSE : 214- 217: sgtav L-LpL villg TNR1_MOUSE : 220- 223: lplvi L-LgL cllsf TNR1_MOUSE : 221- 225: plvil LgLcL lsfif TNR1_RAT : 9- 13: pivpg LlLsL vllal TNR1_RAT : 10- 13: ivpgl L-LsL vllal TNR1_RAT : 11- 15: vpgll LsLvL lallm TNR1_RAT : 15- 18: llslv L-LaL lmgih TNR1_RAT : 213- 216: sgtav L-LpL viflg TNR1_RAT : 220- 224: plvif LgLcL lffic TNR1_RAT : 384- 387: kefmr L-LgL sehei I 9: 12.0102 33( 13) L-x(2)-L-x(2,3)-L Occurences: 33(13) ANK1_HUMAN : 335- 341: iddit LdhLtp-L hvaah ANK1_HUMAN : 1039- 1045: gmdee LgsLee-L ekkrv ANK1_MOUSE : 332- 338: iddit LdhLtp-L hvaah ANK1_MOUSE : 1036- 1042: gmdee LgsLee-L ekkrv ANKC_HUMAN : 363- 369: vddvt LdyLta-L hvaah FASA_HUMAN : 174- 180: gsrsn LgwLcl-L llpip FASA_HUMAN : 174- 181: gsrsn LgwLcllL lpipl FASA_HUMAN : 179- 186: lgwlc LllLpipL ivwvk FASA_MOUSE : 170- 176: sprnr LwlLti-L vllip FASA_MOUSE : 173- 179: nrlwl LtiLvl-L iplvf FASA_MOUSE : 176- 182: wllti LvlLip-L vfiyr KPEL_DROME : 101- 108: htvqt LfaLfkkL klhna MY88_MOUSE : 36- 42: asvgr LleLla-L ldred MY88_MOUSE : 36- 43: asvgr LleLlalL dredi MY88_MOUSE : 37- 43: svgrl LelLal-L dredi NGFR_CHICK : 387- 394: ketat LdaLlvaL rkiqr NGFR_HUMAN : 15- 21: mdgpr LllLll-L gvslg NGFR_HUMAN : 18- 25: prlll LllLgvsL ggake NGFR_HUMAN : 398- 405: qdsat LdaLlaaL rriqr NGFR_RAT : 14- 20: samdr LrlLll-L ilgvs NGFR_RAT : 16- 22: mdrlr LllLli-L gvssg NGFR_RAT : 396- 403: qdsat LdaLlaaL rriqr TNR1_HUMAN : 10- 16: tvpdl LlpLvl-L ellvg TNR1_HUMAN : 13- 19: dlllp LvlLel-L vgiyp TNR1_HUMAN : 222- 228: viffg LclLsl-L figlm TNR1_HUMAN : 225- 232: fglcl LslLfigL myryq TNR1_HUMAN : 418- 425: rreat LelLgrvL rdmdl TNR1_MOUSE : 10- 16: tvpgl LlsLvl-L allmg TNR1_MOUSE : 13- 19: gllls LvlLal-L mgihp TNR1_MOUSE : 214- 220: sgtav LlpLvi-L lglcl TNR1_MOUSE : 214- 221: sgtav LlpLvilL glcll TNR1_MOUSE : 217- 223: avllp LviLlg-L cllsf TNR1_MOUSE : 220- 226: lplvi LlgLcl-L sfifi TNR1_RAT : 10- 16: ivpgl LlsLvl-L allmg TNR1_RAT : 13- 19: gllls LvlLal-L mgihp TNR1_RAT : 213- 220: sgtav LlpLvifL glcll J 10: 12.0102 26( 13) A-x(3,4)-L-x(3)-L Occurences: 26(13) ANK1_HUMAN : 19- 28: sflra ArsgnLdkaL dhlrn ANK1_HUMAN : 1461- 1470: regqn AnmenLytaL qsidr ANK1_HUMAN : 1629- 1637: tvdsd Atng-LidlL eqeeg ANK1_MOUSE : 16- 25: sflra ArsgnLdkaL dhlrn ANK1_MOUSE : 1458- 1467: regen AkmenLytaL rnidr ANK1_MOUSE : 1625- 1633: tvdsd Atng-LadlL gqeeg ANKC_HUMAN : 439- 448: pihva AfmghLnivL lllqn ANKC_HUMAN : 1411- 1419: glvhq Aicn-LnitL piytk ANKC_HUMAN : 1510- 1519: rdgkh AtdtnLvecL tkinr FASA_HUMAN : 290- 298: hgkke Aydt-LikdL kkanl FASA_MOUSE : 282- 290: hgksd Ayqd-LikgL kkaec KPEL_DROME : 350- 358: gdikp Anil-LdqcL qpkig MY88_MOUSE : 31- 40: qgrsg AsvgrLlelL alldr NGFR_CHICK : 2- 11: m AgfvpLlllL lpagp NGFR_CHICK : 385- 394: saket AtldaLlvaL rkiqr NGFR_HUMAN : 396- 405: atqds AtldaLlaaL rriqr NGFR_RAT : 10- 18: gaacs Amdr-LrllL llilg NGFR_RAT : 394- 403: gaqds AtldaLlaaL rriqr TNR1_HUMAN : 91- 100: sgsft AsenhLrhcL scskc TNR1_HUMAN : 321- 329: ppyqg Adpi-LataL asdpi TNR1_HUMAN : 416- 425: tprre AtlelLgrvL rdmdl TNR1_MOUSE : 91- 100: kgtft AsqnyLrqcL scktc TNR1_MOUSE : 212- 221: qdsgt AvllpLvilL glcll TNR1_MOUSE : 322- 330: vptqg Adpl-LyesL csvpa TNR1_RAT : 211- 220: qdsgt AvllpLvifL glcll TNR1_RAT : 327- 335: vptqg Adpl-LygsL npvpi K 11: 11.5102 32( 13) A-x(0,1)-L-x(1,2)-L Occurences: 32(13) ANK1_HUMAN : 27- 31: gnldk A-LdhL rngvd ANK1_HUMAN : 221- 225: enlnv AqLl-L nrgas ANK1_HUMAN : 551- 555: gkvrv AeLl-L erdah ANK1_HUMAN : 651- 654: haemv A-Ll-L skqan ANK1_HUMAN : 1448- 1452: leqsv AlLn-L wvire ANK1_HUMAN : 1448- 1452: leqsv A-LlnL wvire ANK1_MOUSE : 24- 28: gnldk A-LdhL rngvd ANK1_MOUSE : 218- 222: enlnv AqLl-L nrgas ANK1_MOUSE : 515- 518: ghvdt A-La-L lekea ANK1_MOUSE : 515- 519: ghvdt A-LalL ekeas ANK1_MOUSE : 548- 552: gkvrl AeLl-L ehdah ANK1_MOUSE : 648- 651: htemv A-Ll-L skqan ANK1_MOUSE : 1445- 1449: ldqst AlLt-L wvdre ANK1_MOUSE : 1445- 1449: ldqst A-LltL wvdre ANKC_HUMAN : 67- 70: qngln A-Lh-L aakeg ANKC_HUMAN : 208- 212: ddtks AaLl-L qndhn ANKC_HUMAN : 209- 212: dtksa A-Ll-L qndhn ANKC_HUMAN : 249- 253: gnvnv AtLl-L nrgaa ANKC_HUMAN : 579- 583: gsldv AkLl-L qrraa ANKC_HUMAN : 612- 615: dnqkv A-Ll-L lekga ANKC_HUMAN : 612- 616: dnqkv AlLl-L ekgas ANKC_HUMAN : 612- 616: dnqkv A-LllL ekgas FASA_HUMAN : 301- 306: kdlkk AnLctL aekiq FASA_MOUSE : 6- 10: mlwiw AvLp-L vlags KPEL_DROME : 47- 52: raqlc AhLdaL dvwqq MY88_MOUSE : 187- 190: fqtkf A-Ls-L spgvq MY88_MOUSE : 239- 242: trlak A-Ls-L p NGFR_CHICK : 385- 390: saket AtLdaL lvalr NGFR_CHICK : 389- 394: tatld AlLvaL rkiqr NGFR_HUMAN : 396- 401: atqds AtLdaL laalr NGFR_HUMAN : 400- 405: satld AlLaaL rriqr NGFR_RAT : 394- 399: gaqds AtLdaL laalr NGFR_RAT : 398- 403: satld AlLaaL rriqr TNR1_HUMAN : 416- 420: tprre AtLe-L lgrvl TNR1_HUMAN : 416- 421: tprre AtLelL grvlr TNR1_MOUSE : 212- 217: qdsgt AvLlpL villg TNR1_MOUSE : 354- 359: qrpdn AdLaiL yavvd TNR1_RAT : 211- 216: qdsgt AvLlpL viflg L 12: 11.5102 27( 13) A-x(1,2)-L-x(1,2)-L Occurences: 27(13) ANK1_HUMAN : 221- 225: enlnv Aq-Ll-L nrgas ANK1_HUMAN : 551- 555: gkvrv Ae-Ll-L erdah ANK1_HUMAN : 1448- 1452: leqsv Al-Ln-L wvire ANK1_MOUSE : 218- 222: enlnv Aq-Ll-L nrgas ANK1_MOUSE : 548- 552: gkvrl Ae-Ll-L ehdah ANK1_MOUSE : 1445- 1449: ldqst Al-Lt-L wvdre ANKC_HUMAN : 208- 212: ddtks Aa-Ll-L qndhn ANKC_HUMAN : 249- 253: gnvnv At-Ll-L nrgaa ANKC_HUMAN : 579- 583: gsldv Ak-Ll-L qrraa ANKC_HUMAN : 612- 616: dnqkv Al-Ll-L ekgas ANKC_HUMAN : 1222- 1227: gfggd AptLr-L lcsit ANKC_HUMAN : 1222- 1228: gfggd AptLrlL csitg FASA_HUMAN : 301- 306: kdlkk An-LctL aekiq FASA_MOUSE : 6- 10: mlwiw Av-Lp-L vlags FASA_MOUSE : 216- 221: tipmn AsnLs-L skyip KPEL_DROME : 33- 39: ldntm AirLlpL pvraq KPEL_DROME : 47- 52: raqlc Ah-LdaL dvwqq MY88_MOUSE : 237- 242: fwtrl AkaLs-L p NGFR_CHICK : 385- 390: saket At-LdaL lvalr NGFR_CHICK : 389- 394: tatld Al-LvaL rkiqr NGFR_HUMAN : 396- 401: atqds At-LdaL laalr NGFR_HUMAN : 400- 405: satld Al-LaaL rriqr NGFR_RAT : 394- 399: gaqds At-LdaL laalr NGFR_RAT : 398- 403: satld Al-LaaL rriqr TNR1_HUMAN : 416- 420: tprre At-Le-L lgrvl TNR1_HUMAN : 416- 421: tprre At-LelL grvlr TNR1_MOUSE : 212- 217: qdsgt AvlLp-L villg TNR1_MOUSE : 212- 217: qdsgt Av-LlpL villg TNR1_MOUSE : 354- 359: qrpdn Ad-LaiL yavvd TNR1_RAT : 211- 216: qdsgt AvlLp-L viflg TNR1_RAT : 211- 216: qdsgt Av-LlpL viflg M 13: 11.5102 39( 13) L-x(2,3)-A-x(0,1)-L Occurences: 39(13) ANK1_HUMAN : 24- 28: arsgn Ldk-A-L dhlrn ANK1_HUMAN : 81- 86: kgnta LhiaA-L agqde ANK1_HUMAN : 81- 86: kgnta Lhi-AaL agqde ANK1_HUMAN : 147- 151: dgftp Lav-A-L qqghe ANK1_HUMAN : 218- 223: ahyen Lnv-AqL llnrg ANK1_HUMAN : 1415- 1420: sehlg Lsw-AeL arelq ANK1_HUMAN : 1466- 1470: anmen Lyt-A-L qsidr ANK1_HUMAN : 1520- 1526: slqde LlspAsL gcals ANK1_HUMAN : 1521- 1526: lqdel Lsp-AsL gcals ANK1_HUMAN : 1526- 1530: lspas Lgc-A-L ssplr ANK1_HUMAN : 1601- 1605: ghewk Leg-A-L seepr ANK1_MOUSE : 21- 25: arsgn Ldk-A-L dhlrn ANK1_MOUSE : 78- 83: kgnta LhiaA-L agqde ANK1_MOUSE : 78- 83: kgnta Lhi-AaL agqde ANK1_MOUSE : 144- 148: dgftp Lav-A-L qqghe ANK1_MOUSE : 215- 220: ahyen Lnv-AqL llnrg ANK1_MOUSE : 1412- 1417: rehlg Lsw-AeL arelq ANK1_MOUSE : 1463- 1467: akmen Lyt-A-L rnidr ANK1_MOUSE : 1517- 1523: slqde LlspAsL qyalp ANK1_MOUSE : 1518- 1523: lqdel Lsp-AsL qyalp ANK1_MOUSE : 1523- 1527: lspas Lqy-A-L psplc ANKC_HUMAN : 101- 106: kgnta Lhi-AsL agqae ANKC_HUMAN : 167- 171: dgftp Lav-A-L qqghn ANKC_HUMAN : 319- 325: vvell LergApL lartk ANKC_HUMAN : 484- 489: vvrcl LrngA-L vdara ANKC_HUMAN : 576- 581: akygs Ldv-AkL llqrr ANKC_HUMAN : 954- 959: wgten LdnvA-L ssspi FASA_HUMAN : 12- 18: llplv LtsvArL ssksv FASA_HUMAN : 298- 303: tlikd Lkk-AnL ctlae FASA_MOUSE : 2- 8: m LwiwAvL plvla KPEL_DROME : 39- 45: irllp LpvrAqL cahld KPEL_DROME : 475- 480: aieag LhctA-L dpqdr MY88_MOUSE : 37- 42: svgrl LellA-L ldred MY88_MOUSE : 37- 43: svgrl LellAlL dredi MY88_MOUSE : 236- 240: wfwtr Lak-A-L slp NGFR_CHICK : 390- 394: atlda Llv-A-L rkiqr NGFR_HUMAN : 401- 405: atlda Lla-A-L rriqr NGFR_RAT : 399- 403: atlda Lla-A-L rriqr TNR1_HUMAN : 325- 329: gadpi Lat-A-L asdpi TNR1_HUMAN : 441- 447: dieea LcgpAaL ppaps TNR1_MOUSE : 13- 18: gllls LvllA-L lmgih TNR1_MOUSE : 13- 19: gllls LvllAlL mgihp TNR1_RAT : 13- 18: gllls LvllA-L lmgih TNR1_RAT : 13- 19: gllls LvllAlL mgihp N 14: 11.5102 31( 13) T-x(0,1)-L-x(2,3)-L Occurences: 31(13) ANK1_HUMAN : 145- 151: tedgf TpLavaL qqghe ANK1_HUMAN : 334- 338: eiddi T-Ldh-L tplhv ANK1_HUMAN : 517- 522: eghve TvLal-L ekeas ANK1_HUMAN : 1167- 1172: gegdt TsLrl-L csvig ANK1_HUMAN : 1226- 1232: avnfa TlLykeL tavpy ANK1_MOUSE : 142- 148: tedgf TpLavaL qqghe ANK1_MOUSE : 331- 335: eiddi T-Ldh-L tplhv ANK1_MOUSE : 514- 519: eghvd TaLal-L ekeas ANK1_MOUSE : 1164- 1169: gegdt TsLrl-L csvig ANK1_MOUSE : 1223- 1229: avhfa TlLykeL tavpy ANK1_MOUSE : 1374- 1378: edrrr T-Ltp-L tlrys ANK1_MOUSE : 1444- 1449: lldqs TaLlt-L wvdre ANKC_HUMAN : 165- 171: tedgf TpLavaL qqghn ANKC_HUMAN : 362- 366: pvddv T-Ldy-L talhv ANKC_HUMAN : 1224- 1228: ggdap T-Lrl-L csitg ANKC_HUMAN : 1467- 1473: lgfsw TeLareL dftee ANKC_HUMAN : 1513- 1519: khatd TnLvecL tkinr FASA_HUMAN : 6- 10: mlgiw T-Llp-L vltsv FASA_HUMAN : 6- 12: mlgiw TlLplvL tsvar FASA_HUMAN : 293- 298: keayd T-LikdL kkanl FASA_MOUSE : 174- 179: rlwll TiLvl-L iplvf KPEL_DROME : 100- 104: nhtvq T-Lfa-L fkklk MY88_MOUSE : 95- 101: elggi TtLddpL gqtpe MY88_MOUSE : 96- 101: lggit T-LddpL gqtpe MY88_MOUSE : 234- 240: kswfw TrLakaL slp NGFR_CHICK : 386- 390: aketa T-Lda-L lvalr NGFR_CHICK : 386- 391: aketa T-LdalL valrk NGFR_HUMAN : 397- 401: tqdsa T-Lda-L laalr NGFR_HUMAN : 397- 402: tqdsa T-LdalL aalrr NGFR_RAT : 395- 399: aqdsa T-Lda-L laalr NGFR_RAT : 395- 400: aqdsa T-LdalL aalrr TNR1_HUMAN : 211- 216: edsgt TvLlp-L viffg TNR1_HUMAN : 417- 421: prrea T-Lel-L grvlr TNR1_MOUSE : 28- 34: hpsgv TgLvpsL gdrek TNR1_RAT : 28- 34: hpsgv TgLvpsL gdrek O 15: 11.5102 28( 13) T-x(1,3)-L-x(3)-L Occurences: 28(13) ANK1_HUMAN : 145- 151: tedgf Tp--LavaL qqghe ANK1_HUMAN : 1226- 1232: avnfa Tl--LykeL tavpy ANK1_HUMAN : 1630- 1637: vdsda Tng-LidlL eqeeg ANK1_MOUSE : 142- 148: tedgf Tp--LavaL qqghe ANK1_MOUSE : 1223- 1229: avhfa Tl--LykeL tavpy ANK1_MOUSE : 1626- 1633: vdsda Tng-LadlL gqeeg ANKC_HUMAN : 165- 171: tedgf Tp--LavaL qqghn ANKC_HUMAN : 1080- 1088: hfcdy TedeLneiL ngmde ANKC_HUMAN : 1467- 1473: lgfsw Te--LareL dftee ANKC_HUMAN : 1511- 1519: dgkha TdtnLvecL tkinr ANKC_HUMAN : 1513- 1519: khatd Tn--LvecL tkinr FASA_HUMAN : 6- 12: mlgiw Tl--LplvL tsvar FASA_MOUSE : 174- 182: rlwll TilvLlipL vfiyr KPEL_DROME : 100- 108: nhtvq TlfaLfkkL klhna MY88_MOUSE : 95- 101: elggi Tt--LddpL gqtpe MY88_MOUSE : 234- 240: kswfw Tr--LakaL slp NGFR_CHICK : 347- 355: ssaee TwrqLageL gyked NGFR_CHICK : 384- 391: wsake Tat-LdalL valrk NGFR_CHICK : 386- 394: aketa TldaLlvaL rkiqr NGFR_HUMAN : 358- 366: gsagd TwrhLageL gyqpe NGFR_HUMAN : 397- 405: tqdsa TldaLlaaL rriqr NGFR_RAT : 356- 364: llngd TwrhLageL gyqpe NGFR_RAT : 395- 403: aqdsa TldaLlaaL rriqr TNR1_HUMAN : 5- 13: mgls TvpdLllpL vllel TNR1_HUMAN : 417- 425: prrea TlelLgrvL rdmdl TNR1_MOUSE : 5- 13: mglp TvpgLllsL vllal TNR1_MOUSE : 28- 34: hpsgv Tg--LvpsL gdrek TNR1_RAT : 28- 34: hpsgv Tg--LvpsL gdrek P 16: 11.5102 34( 13) L-x-P-x(0,2)-V Occurences: 34(13) ANK1_HUMAN : 338- 343: itldh LtPlhV aahcg ANK1_HUMAN : 404- 409: vtesg LtPlhV asfmg ANK1_HUMAN : 569- 574: agkng LtPlhV avhhn ANK1_HUMAN : 985- 988: tgaqf LsP--V iveip ANK1_HUMAN : 985- 990: tgaqf LsPviV eiphf ANK1_HUMAN : 1086- 1090: slksk LvPl-V qatfp ANK1_HUMAN : 1300- 1303: elsgn LvP--V kkaaq ANK1_HUMAN : 1572- 1577: vwsag LtPslV taeds ANK1_MOUSE : 335- 340: itldh LtPlhV aahcg ANK1_MOUSE : 401- 406: vtesg LtPlhV asfmg ANK1_MOUSE : 566- 571: agkng LtPlhV avhhn ANK1_MOUSE : 982- 985: tgaqf LsP--V iveip ANK1_MOUSE : 982- 987: tgaqf LsPviV eiphf ANK1_MOUSE : 1083- 1087: slrsk LvPl-V qatfp ANK1_MOUSE : 1297- 1300: elsgn LvP--V kkaaq ANK1_MOUSE : 1502- 1507: dreys LsPsqV ngyss ANK1_MOUSE : 1569- 1574: vwsag LtPslV taeds ANKC_HUMAN : 432- 437: itesg LtPihV aafmg ANKC_HUMAN : 597- 602: agkng LtPlhV aahyd ANKC_HUMAN : 1041- 1044: sgaqf LgP--V iveip ANKC_HUMAN : 1041- 1046: sgaqf LgPviV eiphf FASA_HUMAN : 7- 11: lgiwt LlPl-V ltsva FASA_HUMAN : 215- 220: hespt LnPetV ainls FASA_MOUSE : 179- 183: tilvl LiPl-V fiyrk KPEL_DROME : 36- 41: tmair LlPlpV raqlc KPEL_DROME : 64- 69: atavk LyPdqV eqiss MY88_MOUSE : 190- 194: kfals LsPg-V qqkrl NGFR_CHICK : 240- 243: gtadn LiP--V ycsil NGFR_HUMAN : 251- 254: gttdn LiP--V ycsil NGFR_RAT : 224- 229: ppeqd LvPstV admvt NGFR_RAT : 252- 255: gttdn LiP--V ycsil TNR1_HUMAN : 10- 14: tvpdl LlPl-V llell TNR1_HUMAN : 213- 217: sgttv LlPl-V iffgl TNR1_MOUSE : 214- 218: sgtav LlPl-V illgl TNR1_RAT : 196- 199: cmklc LpP--V anvtn TNR1_RAT : 213- 217: sgtav LlPl-V iflgl TNR1_RAT : 335- 338: llygs LnP--V pipap Q 17: 11.5102 39( 13) T-x(3,4)-L-x(1,2)-L Occurences: 39(13) ANK1_HUMAN : 268- 275: qietk Tkde-LtpL hcaar ANK1_HUMAN : 334- 341: eiddi Tldh-LtpL hvaah ANK1_HUMAN : 400- 407: sidav Tesg-LtpL hvasf ANK1_HUMAN : 482- 489: arigh TnmvkLl-L ennan ANK1_HUMAN : 746- 753: aqqgh TdivtLl-L kngas ANK1_HUMAN : 1100- 1107: penav TkrvkLa-L qaqpv ANK1_HUMAN : 1351- 1358: mkyed Tqhi-LchL nitmp ANK1_HUMAN : 1377- 1383: edrrr Tptp-La-L rysil ANK1_MOUSE : 265- 272: qietr Tkde-LtpL hcaar ANK1_MOUSE : 331- 338: eiddi Tldh-LtpL hvaah ANK1_MOUSE : 397- 404: sidav Tesg-LtpL hvasf ANK1_MOUSE : 479- 486: arigh TgmvkLl-L engas ANK1_MOUSE : 644- 651: aqegh TemvaLl-L skqan ANK1_MOUSE : 743- 750: aqqgh TdivtLl-L kngas ANK1_MOUSE : 1097- 1104: penav TkkvkLa-L qaqpv ANK1_MOUSE : 1348- 1355: mkyed Tqhi-LchL nitmp ANK1_MOUSE : 1374- 1380: edrrr Tltp-Lt-L rysil ANKC_HUMAN : 205- 212: arkdd TksaaLl-L qndhn ANKC_HUMAN : 279- 286: skrgn TnmvkLl-L drggq ANKC_HUMAN : 296- 303: qidak Trdg-LtpL hcaar ANKC_HUMAN : 329- 336: pllar Tkng-LspL hmaaq ANKC_HUMAN : 362- 369: pvddv Tldy-LtaL hvaah ANKC_HUMAN : 510- 517: srlgk TeivqLl-L qhmah ANKC_HUMAN : 675- 682: sqegh TdmvtLl-L dkgan ANKC_HUMAN : 692- 699: nihms Tksg-LtsL hlaaq FASA_HUMAN : 6- 12: mlgiw Tllp-Lv-L tsvar FASA_MOUSE : 174- 182: rlwll TilvlLipL vfiyr KPEL_DROME : 31- 39: shldn TmairLlpL pvraq KPEL_DROME : 97- 104: gqynh Tvqt-LfaL fkklk MY88_MOUSE : 132- 138: rqleq Tdyr-Lk-L cvsdr MY88_MOUSE : 184- 190: ecdfq Tkfa-Ls-L spgvq NGFR_CHICK : 386- 394: aketa TldalLvaL rkiqr NGFR_HUMAN : 397- 405: tqdsa TldalLaaL rriqr NGFR_RAT : 395- 403: aqdsa TldalLaaL rriqr TNR1_HUMAN : 5- 11: mgls Tvpd-Ll-L plvll TNR1_HUMAN : 5- 13: mgls TvpdlLlpL vllel TNR1_HUMAN : 210- 216: tedsg Ttvl-Lp-L viffg TNR1_MOUSE : 5- 11: mglp Tvpg-Ll-L slvll TNR1_MOUSE : 5- 13: mglp TvpglLlsL vllal TNR1_MOUSE : 211- 217: pqdsg Tavl-Lp-L villg TNR1_RAT : 210- 216: pqdsg Tavl-Lp-L viflg R 18: 11.5102 30( 13) T-x(2,3)-L-x(0,1)-L Occurences: 30(13) ANK1_HUMAN : 187- 192: nddtr TaavL-L qndpn ANK1_HUMAN : 517- 522: eghve TvlaL-L ekeas ANK1_HUMAN : 1166- 1171: sgegd Tts-LrL lcsvi ANK1_HUMAN : 1167- 1172: gegdt TslrL-L csvig ANK1_HUMAN : 1377- 1383: edrrr TptpLaL rysil ANK1_MOUSE : 184- 189: nddtr TaavL-L qndpn ANK1_MOUSE : 514- 519: eghvd TalaL-L ekeas ANK1_MOUSE : 1163- 1168: sgegd Tts-LrL lcsvi ANK1_MOUSE : 1164- 1169: gegdt TslrL-L csvig ANK1_MOUSE : 1374- 1380: edrrr TltpLtL rysil ANK1_MOUSE : 1444- 1449: lldqs Tal-LtL wvdre ANKC_HUMAN : 381- 385: ghyrv Tkl-L-L dkran ANKC_HUMAN : 1224- 1228: ggdap Tlr-L-L csitg FASA_HUMAN : 6- 12: mlgiw TllpLvL tsvar FASA_MOUSE : 174- 179: rlwll TilvL-L iplvf KPEL_DROME : 432- 437: vpene TkknL-L dyvkq MY88_MOUSE : 18- 22: trpdp Trs-L-L dawqg MY88_MOUSE : 132- 138: rqleq TdyrLkL cvsdr MY88_MOUSE : 184- 190: ecdfq TkfaLsL spgvq NGFR_CHICK : 386- 391: aketa TldaL-L valrk NGFR_HUMAN : 397- 402: tqdsa TldaL-L aalrr NGFR_RAT : 88- 93: pckpc Tec-LgL qsmsa NGFR_RAT : 395- 400: aqdsa TldaL-L aalrr TNR1_HUMAN : 5- 10: mgls TvpdL-L lplvl TNR1_HUMAN : 5- 11: mgls TvpdLlL plvll TNR1_HUMAN : 210- 214: tedsg Ttv-L-L plvif TNR1_HUMAN : 210- 216: tedsg TtvlLpL viffg TNR1_HUMAN : 211- 216: edsgt Tvl-LpL viffg TNR1_HUMAN : 417- 421: prrea Tle-L-L grvlr TNR1_MOUSE : 5- 10: mglp TvpgL-L lslvl TNR1_MOUSE : 5- 11: mglp TvpgLlL slvll TNR1_MOUSE : 211- 215: pqdsg Tav-L-L plvil TNR1_MOUSE : 211- 217: pqdsg TavlLpL villg TNR1_RAT : 210- 214: pqdsg Tav-L-L plvif TNR1_RAT : 210- 216: pqdsg TavlLpL viflg S 19: 11.5102 23( 13) L-x(3)-L-x(2,4)-P Occurences: 23(13) ANK1_HUMAN : 1228- 1236: nfatl LykeLtav-P ymakf ANK1_HUMAN : 1516- 1523: ngyss LqdeLls--P aslgc ANK1_HUMAN : 1526- 1533: lspas LgcaLss--P lradq ANK1_HUMAN : 1601- 1609: ghewk LegaLsee-P rgpel ANK1_MOUSE : 1225- 1233: hfatl LykeLtav-P ymakf ANK1_MOUSE : 1513- 1520: ngyss LqdeLls--P aslqy ANK1_MOUSE : 1523- 1530: lspas LqyaLps--P lcadq ANKC_HUMAN : 1026- 1035: vegeg LasrLievgP sgaqf FASA_HUMAN : 177- 185: snlgw LcllLlpi-P livwv FASA_MOUSE : 172- 181: rnrlw LltiLvlliP lvfiy KPEL_DROME : 452- 459: nrmel LekhLaa--P mgkel MY88_MOUSE : 97- 105: ggitt LddpLgqt-P elfda MY88_MOUSE : 236- 243: wfwtr LakaLsl--P NGFR_CHICK : 7- 16: agfvp LlllLlpagP twgsk NGFR_CHICK : 8- 16: gfvpl LlllLpag-P twgsk NGFR_HUMAN : 362- 370: dtwrh LageLgyq-P ehids NGFR_RAT : 360- 368: dtwrh LageLgyq-P ehids TNR1_HUMAN : 15- 24: llplv LlelLvgiyP sgvig TNR1_HUMAN : 325- 333: gadpi LataLasd-P ipnpl TNR1_MOUSE : 15- 24: llslv LlalLmgihP sgvtg TNR1_MOUSE : 326- 334: gadpl LyesLcsv-P aptsv TNR1_RAT : 15- 24: llslv LlalLmgihP sgvtg TNR1_RAT : 331- 339: gadpl LygsLnpv-P ipapv T 20: 11.5102 34( 13) L-x(3,5)-L-x(5)-L Occurences: 34(13) ANK1_HUMAN : 952- 964: ritcr LvkpqkLstpppL aeeeg ANK1_HUMAN : 958- 970: vkpqk LstpppLaeeegL asrii ANK1_HUMAN : 1516- 1526: ngyss Lqde--LlspasL gcals ANK1_MOUSE : 949- 961: ritcr LvkpqkLntpppL aeeeg ANK1_MOUSE : 955- 967: vkpqk LntpppLaeeegL asrii ANK1_MOUSE : 1513- 1523: ngyss Lqde--LlspasL qyalp ANKC_HUMAN : 870- 881: edlke Lgdds-LpssqfL dgmny ANKC_HUMAN : 875- 887: lgdds LpssqfLdgmnyL rysle FASA_HUMAN : 7- 18: lgiwt Llplv-LtsvarL ssksv FASA_HUMAN : 8- 18: giwtl Lplv--LtsvarL ssksv FASA_HUMAN : 174- 186: gsrsn LgwlclLllpipL ivwvk FASA_MOUSE : 170- 182: sprnr LwlltiLvllipL vfiyr FASA_MOUSE : 172- 182: rnrlw Llti--LvllipL vfiyr KPEL_DROME : 52- 64: ahlda LdvwqqLatavkL ypdqv KPEL_DROME : 104- 116: qtlfa LfkklkLhnamrL ikdyv KPEL_DROME : 289- 299: ggkpc Lvyq--LmkggsL earlr MY88_MOUSE : 37- 49: svgrl LellalLdrediL kelks MY88_MOUSE : 39- 49: grlle Llal--LdrediL kelks MY88_MOUSE : 97- 107: ggitt Lddp--LgqtpeL fdafi NGFR_CHICK : 351- 361: etwrq Lage--LgykedL idcft NGFR_HUMAN : 15- 25: mdgpr Llll--LllgvsL ggake NGFR_RAT : 330- 342: asgqa LkgdgnLysslpL tkree TNR1_HUMAN : 3- 15: mg LstvpdLllplvL lellv TNR1_HUMAN : 9- 19: stvpd Lllp--LvllelL vgiyp TNR1_HUMAN : 216- 228: tvllp LviffgLcllslL figlm TNR1_HUMAN : 420- 431: eatle Llgrv-LrdmdlL gcled TNR1_HUMAN : 421- 431: atlel Lgrv--LrdmdlL gcled TNR1_HUMAN : 441- 453: dieea LcgpaaLppapsL lr TNR1_MOUSE : 3- 15: mg LptvpgLllslvL lallm TNR1_MOUSE : 9- 19: ptvpg Llls--LvllalL mgihp TNR1_MOUSE : 214- 226: sgtav LlplviLlglclL sfifi TNR1_MOUSE : 215- 226: gtavl Lplvi-LlglclL sfifi TNR1_RAT : 3- 15: mg LpivpgLllslvL lallm TNR1_RAT : 9- 19: pivpg Llls--LvllalL mgihp Number of patterns evaluated by Pratt:3191 Total running time: 7 seconds