------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 8 sequences from file CU2_MONOOXYGENASE_1 PATTERN CONSERVATION: CM: min Nr of Seqs to Match 8 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 50 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename CU2_MONOOXYGENASE_1.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: AMD1_XENLA 400 AMD2_XENLA 875 AMD_BOVIN 972 AMD_HUMAN 974 AMD_RAT 976 DOPO_BOVIN 610 DOPO_HUMAN 603 DOPO_RAT 620 Pratt run started at Thu Feb 6 19:13:28 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 49.0406 8( 8) D-x(5)-C-x(2,3)-T-x(2,3)-R-x(3)-T-x(2)-G-x(5)-E-M-C-x(2)-Y-x(2)-Y-Y 2: 45.3706 11( 8) A-x(1,2)-A-x(2)-A-x(5)-P-x(3)-G-x(3)-G-x(4)-S-x(4)-L-x-V-H-Y 3: 45.3706 8( 8) A-x(0,1)-A-x(2)-A-x(5)-P-x(3)-G-x(3)-G-x(4)-S-x(4)-L-x-V-H-Y 4: 44.8706 8( 8) C-x(2,3)-T-x(2,3)-R-x(3)-T-x(2)-G-x(5)-E-M-C-x(2)-Y-x(2)-Y-Y 5: 44.8706 11( 8) A-x(1,2)-A-x(1,2)-A-x(5)-P-x(3)-G-x(3)-G-x(4)-S-x(4)-L-x-V-H-Y 6: 44.8706 8( 8) A-x(0,1)-A-x(1,2)-A-x(5)-P-x(3)-G-x(3)-G-x(4)-S-x(4)-L-x-V-H-Y 7: 41.2005 8( 8) T-x(2,3)-R-x(3)-T-x(2)-G-x(5)-E-M-C-x(2)-Y-x(2)-Y-Y 8: 40.7005 8( 8) R-x(3)-T-x(2)-G-x(0,1)-G-x(3,4)-E-M-C-x(2)-Y-x(2)-Y-Y 9: 40.7005 8( 8) F-A-x(3)-H-T-H-x(0,1)-L-x(0,1)-G-x(2)-V-x(5)-R-x-G 10: 36.5305 8( 8) T-x(2)-G-x(0,1)-G-x(3,4)-E-M-C-x(2)-Y-x(2)-Y-Y 11: 36.5305 8( 8) T-x(1,2)-G-G-x(4)-E-x(0,1)-M-C-x(2)-Y-x(2)-Y-Y 12: 36.5305 8( 8) A-x(3)-H-T-H-x(0,1)-L-x(0,1)-G-x(2)-V-x(5)-R-x-G 13: 33.3604 8( 8) P-x(3)-G-x(3)-G-x(4)-S-x(4)-L-x-V-H-Y 14: 32.8604 8( 8) G-G-x(4)-E-x(0,1)-M-C-x(2)-Y-x(2)-Y-Y 15: 32.8604 8( 8) G-G-x(4,5)-E-M-C-x(2)-Y-x(2)-Y-Y 16: 32.8604 8( 8) P-x(3)-G-x(2,3)-G-x(4)-S-x(4)-L-x-V-H-Y 17: 32.3604 8( 8) G-G-x(3,4)-E-x(0,1)-M-C-x(2)-Y-x(2)-Y-Y 18: 32.3604 8( 8) G-x(0,1)-G-x(3,4)-E-M-C-x(2)-Y-x(2)-Y-Y 19: 32.3604 8( 8) G-x(5)-E-M-C-x(0,1)-N-x(0,1)-Y-x(2)-Y-Y 20: 32.3604 8( 8) H-T-H-x(0,1)-L-x(0,1)-G-x(2)-V-x(5)-R-x-G Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 115.8057 8( 8) A-x(0,1)-A-x(2)-A-x-[AP]-x(3)-P-[EK]-[EG]-[AV]-G-[FLV]-x-[FLV]-G-[GS]-x-[GST]-[GS]-S-[KR]-[FY]-[FL]-x-L-[EQ]-V-H-Y-x-[DN]-[IPV]-x-[ANV]-[FI]-x-[DG]-x(2)-[DK]-[DS]-[CS]-[GST]-[GI] B 2: 115.3057 11( 8) A-x(1,2)-A-x(1,2)-A-x-[AP]-x(3)-P-[EK]-[EG]-[AV]-G-[FLV]-x-[FLV]-G-[GS]-x-[GST]-[GS]-S-[KR]-[FY]-[FL]-x-L-[EQ]-V-H-Y-x-[DN]-[IPV]-x-[ANV]-[FI]-x-[DG]-x(2)-[DK]-[DS]-[CS]-[GST]-[GI] C 3: 115.3057 8( 8) A-x(0,1)-A-x(1,2)-A-x-[AP]-x(3)-P-[EK]-[EG]-[AV]-G-[FLV]-x-[FLV]-G-[GS]-x-[GST]-[GS]-S-[KR]-[FY]-[FL]-x-L-[EQ]-V-H-Y-x-[DN]-[IPV]-x-[ANV]-[FI]-x-[DG]-x(2)-[DK]-[DS]-[CS]-[GST]-[GI] D 4: 112.5094 11( 8) A-x(1,2)-A-x(2)-A-x-[AP]-x(3)-P-[EK]-[EG]-[AV]-G-[FLV]-x-[FLV]-G-[GS]-x-[GST]-[GS]-S-[KR]-[FY]-[FL]-x-L-[EQ]-V-H-Y-x-[DN]-[IPV]-x-[ANV]-[FI]-x-[DG]-x(2)-[DK]-[DS]-[CS]-[GST] E 5: 102.7090 8( 8) D-[ILV]-[IL]-[AI]-[AT]-[RS]-C-x(2,3)-T-x(2,3)-R-x(2)-[AV]-T-x-[GI]-G-x-[GT]-x(2)-[DE]-E-M-C-[NV]-x-Y-[IV]-x-Y-Y-x(2)-[AT]-x(2)-[AE]-x-[CS]-x(2)-[AT]-[CV]-[DTV] F 6: 97.4077 8( 8) F-A-x-[QR]-[LV]-H-T-H-x(0,1)-L-x(0,1)-G-x(2)-V-x-[GT]-x(2)-[AV]-R-x-G-x(4)-[IV]-[GV]-[NR]-[QR]-[DNS]-[NP]-x(2)-[PS]-[PQ]-x-F-x-[EP]-[IV]-x(2)-[LP]-x(2)-[AIV]-[STV] G 7: 96.4252 8( 8) A-x-[QR]-[LV]-H-T-H-x(0,1)-L-x(0,1)-G-x(2)-V-x-[GT]-x(2)-[AV]-R-x-G-x(4)-[IV]-[GV]-[NR]-[QR]-[DNS]-[NP]-x(2)-[PS]-[PQ]-x-F-x-[EP]-[IV]-x(2)-[LP]-x(2)-[AIV]-[STV]-x-[GV] H 8: 92.0270 8( 8) G-x-[GT]-x(2)-[DE]-E-M-C-x(0,1)-N-x(0,1)-Y-[IV]-x-Y-Y-x(2)-[AT]-x(2)-[AE]-x-[CS]-x(2)-[AT]-[CV]-[DTV]-x-[GNT]-x(3)-[DK]-x-F-x(2)-[IV]-[NP]-x(2)-[AGN]-[NS]-x-[DEP]-[IV]-[CP] I 9: 91.8131 8( 8) H-T-H-x(0,1)-L-x(0,1)-G-x(2)-V-x-[GT]-x(2)-[AV]-R-x-G-x(4)-[IV]-[GV]-[NR]-[QR]-[DNS]-[NP]-x(2)-[PS]-[PQ]-x-F-x-[EP]-[IV]-x(2)-[LP]-x(2)-[AIV]-[STV]-x-[GV]-x(2)-[GIL]-[AD] J 10: 88.8650 8( 8) G-G-x(3,4)-E-x(0,1)-M-C-[NV]-x-Y-[IV]-x-Y-Y-x(2)-[AT]-x(2)-[AE]-x-[CS]-x(2)-[AT]-[CV]-[DTV]-x-[GNT]-x(3)-[DK]-x-F-x(2)-[IV]-[NP]-x(2)-[AGN]-[NS]-x-[DEP]-[IV]-[CP] K 11: 88.8650 8( 8) G-x(0,1)-G-x(3,4)-E-M-C-[NV]-x-Y-[IV]-x-Y-Y-x(2)-[AT]-x(2)-[AE]-x-[CS]-x(2)-[AT]-[CV]-[DTV]-x-[GNT]-x(3)-[DK]-x-F-x(2)-[IV]-[NP]-x(2)-[AGN]-[NS]-x-[DEP]-[IV]-[CP] L 12: 88.7928 8( 8) R-x(2)-[AV]-T-x-[GI]-G-x(0,1)-G-x(3,4)-E-M-C-[NV]-x-Y-[IV]-x-Y-Y-x(2)-[AT]-x(2)-[AE]-x-[CS]-x(2)-[AT]-[CV]-[DTV]-x-[GNT]-x(3)-[DK]-x-F-x(2)-[IV]-[NP] M 13: 88.7597 8( 8) C-x(2,3)-T-x(2,3)-R-x(2)-[AV]-T-x-[GI]-G-x-[GT]-x(2)-[DE]-E-M-C-[NV]-x-Y-[IV]-x-Y-Y-x(2)-[AT]-x(2)-[AE]-x-[CS]-x(2)-[AT]-[CV]-[DTV]-x-[GNT]-x(3)-[DK] N 14: 88.7579 8( 8) G-G-x-[AGS]-x(2)-E-x(0,1)-M-C-[NV]-x-Y-[IV]-x-Y-Y-x(2)-[AT]-x(2)-[AE]-x-[CS]-x(2)-[AT]-[CV]-[DTV]-x-[GNT]-x(3)-[DK]-x-F-x(2)-[IV]-[NP]-x(2)-[AGN]-[NS]-x-[DEP]-[IV] O 15: 87.3201 8( 8) T-x-[GI]-G-x(0,1)-G-x(3,4)-E-M-C-[NV]-x-Y-[IV]-x-Y-Y-x(2)-[AT]-x(2)-[AE]-x-[CS]-x(2)-[AT]-[CV]-[DTV]-x-[GNT]-x(3)-[DK]-x-F-x(2)-[IV]-[NP]-x(2)-[AGN]-[NS] P 16: 86.6172 8( 8) T-x(1,2)-G-G-x-[AGS]-x(2)-E-x(0,1)-M-C-[NV]-x-Y-[IV]-x-Y-Y-x(2)-[AT]-x(2)-[AE]-x-[CS]-x(2)-[AT]-[CV]-[DTV]-x-[GNT]-x(3)-[DK]-x-F-x(2)-[IV]-[NP]-x(2)-[AGN]-[NS] Q 17: 86.1645 8( 8) G-G-x(4,5)-E-M-C-[NV]-x-Y-[IV]-x-Y-Y-x(2)-[AT]-x(2)-[AE]-x-[CS]-x(2)-[AT]-[CV]-[DTV]-x-[GNT]-x(3)-[DK]-x-F-x(2)-[IV]-[NP]-x(2)-[AGN]-[NS]-x-[DEP]-[IV] R 18: 86.0739 8( 8) T-x(2,3)-R-x(3)-T-x-[GI]-G-x-[GT]-x(2)-[DE]-E-M-C-[NV]-x-Y-[IV]-x-Y-Y-x(2)-[AT]-x(2)-[AE]-x-[CS]-x(2)-[AT]-[CV]-[DTV]-x-[GNT]-x(3)-[DK]-x-F S 19: 85.6490 8( 8) P-x(3)-G-x(3)-G-[GS]-x-[GST]-[GS]-S-[KR]-[FY]-[FL]-x-L-[EQ]-V-H-Y-x-[DN]-[IPV]-x-[ANV]-[FI]-x-[DG]-x(2)-[DK]-[DS]-[CS]-[GST]-[GI] T 20: 85.1490 8( 8) P-x(3)-G-x(2,3)-G-[GS]-x-[GST]-[GS]-S-[KR]-[FY]-[FL]-x-L-[EQ]-V-H-Y-x-[DN]-[IPV]-x-[ANV]-[FI]-x-[DG]-x(2)-[DK]-[DS]-[CS]-[GST]-[GI] Best patterns with alignements: fitness hits(seqs) Pattern A 1: 115.8057 8( 8) A-x(0,1)-A-x(2)-A-x-[AP]-x(3)-P-[EK]-[EG]-[AV]-G-[FLV]-x-[FLV]-G-[GS]-x-[GST]-[GS]-S-[KR]-[FY]-[FL]-x-L-[EQ]-V-H-Y-x-[DN]-[IPV]-x-[ANV]-[FI]-x-[DG]-x(2)-[DK]-[DS]-[CS]-[GST]-[GI] Occurences: 8(8) AMD1_XENLA : 136- 184: ssimy AwAknApPtklPEGVGFrVGGkSGSRYFvLQVHYgNVkAFqDkhKDCTG vtvrv AMD2_XENLA : 138- 186: ssimy AwAknApPtklPEGVGFqVGGkSGSRYFvLQVHYgDVkAFqDkhKDCTG vtvri AMD_BOVIN : 135- 183: anily AwArnApPtrlPKGVGFrVGGeTGSKYFvLQVHYgDIsAFrDnhKDCSG vslhl AMD_HUMAN : 135- 183: anily AwArnApPtrlPKGVGFrVGGeTGSKYFvLQVHYgDIsAFrDnnKDCSG vslhl AMD_RAT : 140- 188: anily AwArnApPtrlPKGVGFrVGGeTGSKYFvLQVHYgDIsAFrDnhKDCSG vsvhl DOPO_BOVIN : 294- 342: rhvla AwAlgAkAfyyPEEAGLaFGGpGSSRFLrLEVHYhNPlVItGrrDSSGI rlyyt DOPO_HUMAN : 287- 335: rhvla AwAlgAkAfyyPEEAGLaFGGpGSSRYLrLEVHYhNPlVIeGrnDSSGI rlyyt DOPO_RAT : 304- 352: rhvla AwAlgAkAfyyPEEAGVpLGSsGSSRFLrLEVHYhNPrNIqGrrDSSGI rlhyt B 2: 115.3057 11( 8) A-x(1,2)-A-x(1,2)-A-x-[AP]-x(3)-P-[EK]-[EG]-[AV]-G-[FLV]-x-[FLV]-G-[GS]-x-[GST]-[GS]-S-[KR]-[FY]-[FL]-x-L-[EQ]-V-H-Y-x-[DN]-[IPV]-x-[ANV]-[FI]-x-[DG]-x(2)-[DK]-[DS]-[CS]-[GST]-[GI] Occurences: 11(8) AMD1_XENLA : 136- 184: ssimy Aw-AknApPtklPEGVGFrVGGkSGSRYFvLQVHYgNVkAFqDkhKDCTG vtvrv AMD2_XENLA : 138- 186: ssimy Aw-AknApPtklPEGVGFqVGGkSGSRYFvLQVHYgDVkAFqDkhKDCTG vtvri AMD_BOVIN : 135- 183: anily Aw-ArnApPtrlPKGVGFrVGGeTGSKYFvLQVHYgDIsAFrDnhKDCSG vslhl AMD_HUMAN : 135- 183: anily Aw-ArnApPtrlPKGVGFrVGGeTGSKYFvLQVHYgDIsAFrDnnKDCSG vslhl AMD_RAT : 140- 188: anily Aw-ArnApPtrlPKGVGFrVGGeTGSKYFvLQVHYgDIsAFrDnhKDCSG vsvhl DOPO_BOVIN : 293- 342: crhvl AawAlgAkAfyyPEEAGLaFGGpGSSRFLrLEVHYhNPlVItGrrDSSGI rlyyt DOPO_BOVIN : 294- 342: rhvla Aw-AlgAkAfyyPEEAGLaFGGpGSSRFLrLEVHYhNPlVItGrrDSSGI rlyyt DOPO_HUMAN : 286- 335: crhvl AawAlgAkAfyyPEEAGLaFGGpGSSRYLrLEVHYhNPlVIeGrnDSSGI rlyyt DOPO_HUMAN : 287- 335: rhvla Aw-AlgAkAfyyPEEAGLaFGGpGSSRYLrLEVHYhNPlVIeGrnDSSGI rlyyt DOPO_RAT : 303- 352: crhvl AawAlgAkAfyyPEEAGVpLGSsGSSRFLrLEVHYhNPrNIqGrrDSSGI rlhyt DOPO_RAT : 304- 352: rhvla Aw-AlgAkAfyyPEEAGVpLGSsGSSRFLrLEVHYhNPrNIqGrrDSSGI rlhyt C 3: 115.3057 8( 8) A-x(0,1)-A-x(1,2)-A-x-[AP]-x(3)-P-[EK]-[EG]-[AV]-G-[FLV]-x-[FLV]-G-[GS]-x-[GST]-[GS]-S-[KR]-[FY]-[FL]-x-L-[EQ]-V-H-Y-x-[DN]-[IPV]-x-[ANV]-[FI]-x-[DG]-x(2)-[DK]-[DS]-[CS]-[GST]-[GI] Occurences: 8(8) AMD1_XENLA : 136- 184: ssimy AwAknApPtklPEGVGFrVGGkSGSRYFvLQVHYgNVkAFqDkhKDCTG vtvrv AMD2_XENLA : 138- 186: ssimy AwAknApPtklPEGVGFqVGGkSGSRYFvLQVHYgDVkAFqDkhKDCTG vtvri AMD_BOVIN : 135- 183: anily AwArnApPtrlPKGVGFrVGGeTGSKYFvLQVHYgDIsAFrDnhKDCSG vslhl AMD_HUMAN : 135- 183: anily AwArnApPtrlPKGVGFrVGGeTGSKYFvLQVHYgDIsAFrDnnKDCSG vslhl AMD_RAT : 140- 188: anily AwArnApPtrlPKGVGFrVGGeTGSKYFvLQVHYgDIsAFrDnhKDCSG vsvhl DOPO_BOVIN : 294- 342: rhvla AwAlgAkAfyyPEEAGLaFGGpGSSRFLrLEVHYhNPlVItGrrDSSGI rlyyt DOPO_HUMAN : 287- 335: rhvla AwAlgAkAfyyPEEAGLaFGGpGSSRYLrLEVHYhNPlVIeGrnDSSGI rlyyt DOPO_RAT : 304- 352: rhvla AwAlgAkAfyyPEEAGVpLGSsGSSRFLrLEVHYhNPrNIqGrrDSSGI rlhyt D 4: 112.5094 11( 8) A-x(1,2)-A-x(2)-A-x-[AP]-x(3)-P-[EK]-[EG]-[AV]-G-[FLV]-x-[FLV]-G-[GS]-x-[GST]-[GS]-S-[KR]-[FY]-[FL]-x-L-[EQ]-V-H-Y-x-[DN]-[IPV]-x-[ANV]-[FI]-x-[DG]-x(2)-[DK]-[DS]-[CS]-[GST] Occurences: 11(8) AMD1_XENLA : 136- 183: ssimy Aw-AknApPtklPEGVGFrVGGkSGSRYFvLQVHYgNVkAFqDkhKDCT gvtvr AMD2_XENLA : 138- 185: ssimy Aw-AknApPtklPEGVGFqVGGkSGSRYFvLQVHYgDVkAFqDkhKDCT gvtvr AMD_BOVIN : 135- 182: anily Aw-ArnApPtrlPKGVGFrVGGeTGSKYFvLQVHYgDIsAFrDnhKDCS gvslh AMD_HUMAN : 135- 182: anily Aw-ArnApPtrlPKGVGFrVGGeTGSKYFvLQVHYgDIsAFrDnnKDCS gvslh AMD_RAT : 140- 187: anily Aw-ArnApPtrlPKGVGFrVGGeTGSKYFvLQVHYgDIsAFrDnhKDCS gvsvh DOPO_BOVIN : 293- 341: crhvl AawAlgAkAfyyPEEAGLaFGGpGSSRFLrLEVHYhNPlVItGrrDSSG irlyy DOPO_BOVIN : 294- 341: rhvla Aw-AlgAkAfyyPEEAGLaFGGpGSSRFLrLEVHYhNPlVItGrrDSSG irlyy DOPO_HUMAN : 286- 334: crhvl AawAlgAkAfyyPEEAGLaFGGpGSSRYLrLEVHYhNPlVIeGrnDSSG irlyy DOPO_HUMAN : 287- 334: rhvla Aw-AlgAkAfyyPEEAGLaFGGpGSSRYLrLEVHYhNPlVIeGrnDSSG irlyy DOPO_RAT : 303- 351: crhvl AawAlgAkAfyyPEEAGVpLGSsGSSRFLrLEVHYhNPrNIqGrrDSSG irlhy DOPO_RAT : 304- 351: rhvla Aw-AlgAkAfyyPEEAGVpLGSsGSSRFLrLEVHYhNPrNIqGrrDSSG irlhy E 5: 102.7090 8( 8) D-[ILV]-[IL]-[AI]-[AT]-[RS]-C-x(2,3)-T-x(2,3)-R-x(2)-[AV]-T-x-[GI]-G-x-[GT]-x(2)-[DE]-E-M-C-[NV]-x-Y-[IV]-x-Y-Y-x(2)-[AT]-x(2)-[AE]-x-[CS]-x(2)-[AT]-[CV]-[DTV] Occurences: 8(8) AMD1_XENLA : 283- 331: eispg DIIATRClf-TgkgRtsATyIGgTsnDEMCNlYImYYmdAahAtSymTCV qtgep AMD2_XENLA : 285- 333: eispg DIIATRClf-TgkgRmsATyIGgTakDEMCNlYImYYmdAahAtSymTCV qtgnp AMD_BOVIN : 282- 330: dvsfg DILAARCvf-TgegRteVThIGgTssDEMCNlYImYYmeAkhAvSfmTCT qnvap AMD_HUMAN : 282- 330: dvsfg DLLAARCvf-TgegRteAThIGgTssDEMCNlYImYYmeAkhAvSfmTCT qnvap AMD_RAT : 287- 335: dvtfg DILAARCvf-TgegRteAThIGgTssDEMCNlYImYYmeAkyAlSfmTCT knvap DOPO_BOVIN : 453- 501: svqpg DVLITSCtynTed-RrlATvGGfGilEEMCVnYVhYYpqTqlElCksAVD pgflh DOPO_HUMAN : 446- 494: svhpg DVLITSCtynTed-RelATvGGfGilEEMCVnYVhYYpqTqlElCktAVD agflq DOPO_RAT : 463- 511: tvhqg DVLITSCtynTen-RtmATvGGfGilEEMCVnYVhYYpkTelElCksAVD dgflq F 6: 97.4077 8( 8) F-A-x-[QR]-[LV]-H-T-H-x(0,1)-L-x(0,1)-G-x(2)-V-x-[GT]-x(2)-[AV]-R-x-G-x(4)-[IV]-[GV]-[NR]-[QR]-[DNS]-[NP]-x(2)-[PS]-[PQ]-x-F-x-[EP]-[IV]-x(2)-[LP]-x(2)-[AIV]-[STV] Occurences: 8(8) AMD1_XENLA : 233- 280: ptihp FAyRVHTHqL-GqvVsGfrVRhGkwslIGRQSPqlPQaFyPVehPveIS pgdii AMD2_XENLA : 235- 282: ptihp FAyRVHTHqL-GqvVsGfrVRhGkwtlIGRQSPqlPQaFyPVehPleIS pgdii AMD_BOVIN : 232- 279: ypmhv FAyRVHTHhL-GkvVsGyrVRnGqwtlIGRQSPqlPQaFyPVehPvdVS fgdil AMD_HUMAN : 232- 279: ypmhv FAyRVHTHhL-GkvVsGyrVRnGqwtlIGRQSPqlPQaFyPVghPvdVS fgdll AMD_RAT : 237- 284: ypmhv FAyRVHTHhL-GkvVsGyrVRnGqwtlIGRQNPqlPQaFyPVehPvdVT fgdil DOPO_BOVIN : 400- 447: sgihi FAsQLHTH-LtGrkVvTvlARdGreteIVNRDNhySPhFqEIrmLkkVV svqpg DOPO_HUMAN : 393- 440: sgihi FAsQLHTH-LtGrkVvTvlVRdGreweIVNQDNhySPhFqEIrmLkkVV svhpg DOPO_RAT : 410- 457: sgiri FAsQLHTH-LtGrkViTvlARdGqqreVVNRDNhySPhFqEIrmLknAV tvhqg G 7: 96.4252 8( 8) A-x-[QR]-[LV]-H-T-H-x(0,1)-L-x(0,1)-G-x(2)-V-x-[GT]-x(2)-[AV]-R-x-G-x(4)-[IV]-[GV]-[NR]-[QR]-[DNS]-[NP]-x(2)-[PS]-[PQ]-x-F-x-[EP]-[IV]-x(2)-[LP]-x(2)-[AIV]-[STV]-x-[GV] Occurences: 8(8) AMD1_XENLA : 234- 282: tihpf AyRVHTHqL-GqvVsGfrVRhGkwslIGRQSPqlPQaFyPVehPveISpG diiat AMD2_XENLA : 236- 284: tihpf AyRVHTHqL-GqvVsGfrVRhGkwtlIGRQSPqlPQaFyPVehPleISpG diiat AMD_BOVIN : 233- 281: pmhvf AyRVHTHhL-GkvVsGyrVRnGqwtlIGRQSPqlPQaFyPVehPvdVSfG dilaa AMD_HUMAN : 233- 281: pmhvf AyRVHTHhL-GkvVsGyrVRnGqwtlIGRQSPqlPQaFyPVghPvdVSfG dllaa AMD_RAT : 238- 286: pmhvf AyRVHTHhL-GkvVsGyrVRnGqwtlIGRQNPqlPQaFyPVehPvdVTfG dilaa DOPO_BOVIN : 401- 449: gihif AsQLHTH-LtGrkVvTvlARdGreteIVNRDNhySPhFqEIrmLkkVVsV qpgdv DOPO_HUMAN : 394- 442: gihif AsQLHTH-LtGrkVvTvlVRdGreweIVNQDNhySPhFqEIrmLkkVVsV hpgdv DOPO_RAT : 411- 459: girif AsQLHTH-LtGrkViTvlARdGqqreVVNRDNhySPhFqEIrmLknAVtV hqgdv H 8: 92.0270 8( 8) G-x-[GT]-x(2)-[DE]-E-M-C-x(0,1)-N-x(0,1)-Y-[IV]-x-Y-Y-x(2)-[AT]-x(2)-[AE]-x-[CS]-x(2)-[AT]-[CV]-[DTV]-x-[GNT]-x(3)-[DK]-x-F-x(2)-[IV]-[NP]-x(2)-[AGN]-[NS]-x-[DEP]-[IV]-[CP] Occurences: 8(8) AMD1_XENLA : 303- 351: satyi GgTsnDEMC-NlYImYYmdAahAtSymTCVqTgepKlFqnIPeiANvPIP vspdm AMD2_XENLA : 305- 353: satyi GgTakDEMC-NlYImYYmdAahAtSymTCVqTgnpKlFenIPeiANvPIP vspdm AMD_BOVIN : 302- 350: evthi GgTssDEMC-NlYImYYmeAkhAvSfmTCTqNvapDiFrtIPpeANiPIP vksdm AMD_HUMAN : 302- 350: eathi GgTssDEMC-NlYImYYmeAkhAvSfmTCTqNvapDmFrtIPpeANiPIP vksdm AMD_RAT : 307- 355: eathi GgTssDEMC-NlYImYYmeAkyAlSfmTCTkNvapDmFrtIPaeANiPIP vkpdm DOPO_BOVIN : 473- 521: latvg GfGilEEMCvN-YVhYYpqTqlElCksAVDpGflhKyFrlVNrfNSeEVC tcpqa DOPO_HUMAN : 466- 514: latvg GfGilEEMCvN-YVhYYpqTqlElCktAVDaGflqKyFhlINrfNNeDVC tcpqa DOPO_RAT : 483- 531: matvg GfGilEEMCvN-YVhYYpkTelElCksAVDdGflqKyFhiVNrfGNeEVC tcpqa I 9: 91.8131 8( 8) H-T-H-x(0,1)-L-x(0,1)-G-x(2)-V-x-[GT]-x(2)-[AV]-R-x-G-x(4)-[IV]-[GV]-[NR]-[QR]-[DNS]-[NP]-x(2)-[PS]-[PQ]-x-F-x-[EP]-[IV]-x(2)-[LP]-x(2)-[AIV]-[STV]-x-[GV]-x(2)-[GIL]-[AD] Occurences: 8(8) AMD1_XENLA : 238- 286: fayrv HTHqL-GqvVsGfrVRhGkwslIGRQSPqlPQaFyPVehPveISpGdiIA trclf AMD2_XENLA : 240- 288: fayrv HTHqL-GqvVsGfrVRhGkwtlIGRQSPqlPQaFyPVehPleISpGdiIA trclf AMD_BOVIN : 237- 285: fayrv HTHhL-GkvVsGyrVRnGqwtlIGRQSPqlPQaFyPVehPvdVSfGdiLA arcvf AMD_HUMAN : 237- 285: fayrv HTHhL-GkvVsGyrVRnGqwtlIGRQSPqlPQaFyPVghPvdVSfGdlLA arcvf AMD_RAT : 242- 290: fayrv HTHhL-GkvVsGyrVRnGqwtlIGRQNPqlPQaFyPVehPvdVTfGdiLA arcvf DOPO_BOVIN : 405- 453: fasql HTH-LtGrkVvTvlARdGreteIVNRDNhySPhFqEIrmLkkVVsVqpGD vlits DOPO_HUMAN : 398- 446: fasql HTH-LtGrkVvTvlVRdGreweIVNQDNhySPhFqEIrmLkkVVsVhpGD vlits DOPO_RAT : 415- 463: fasql HTH-LtGrkViTvlARdGqqreVVNRDNhySPhFqEIrmLknAVtVhqGD vlits J 10: 88.8650 8( 8) G-G-x(3,4)-E-x(0,1)-M-C-[NV]-x-Y-[IV]-x-Y-Y-x(2)-[AT]-x(2)-[AE]-x-[CS]-x(2)-[AT]-[CV]-[DTV]-x-[GNT]-x(3)-[DK]-x-F-x(2)-[IV]-[NP]-x(2)-[AGN]-[NS]-x-[DEP]-[IV]-[CP] Occurences: 8(8) AMD1_XENLA : 303- 351: satyi GGtsndE-MCNlYImYYmdAahAtSymTCVqTgepKlFqnIPeiANvPIP vspdm AMD2_XENLA : 305- 353: satyi GGtakdE-MCNlYImYYmdAahAtSymTCVqTgnpKlFenIPeiANvPIP vspdm AMD_BOVIN : 302- 350: evthi GGtssdE-MCNlYImYYmeAkhAvSfmTCTqNvapDiFrtIPpeANiPIP vksdm AMD_HUMAN : 302- 350: eathi GGtssdE-MCNlYImYYmeAkhAvSfmTCTqNvapDmFrtIPpeANiPIP vksdm AMD_RAT : 307- 355: eathi GGtssdE-MCNlYImYYmeAkyAlSfmTCTkNvapDmFrtIPaeANiPIP vkpdm DOPO_BOVIN : 472- 521: rlatv GGfgilEeMCVnYVhYYpqTqlElCksAVDpGflhKyFrlVNrfNSeEVC tcpqa DOPO_HUMAN : 465- 514: elatv GGfgilEeMCVnYVhYYpqTqlElCktAVDaGflqKyFhlINrfNNeDVC tcpqa DOPO_RAT : 482- 531: tmatv GGfgilEeMCVnYVhYYpkTelElCksAVDdGflqKyFhiVNrfGNeEVC tcpqa K 11: 88.8650 8( 8) G-x(0,1)-G-x(3,4)-E-M-C-[NV]-x-Y-[IV]-x-Y-Y-x(2)-[AT]-x(2)-[AE]-x-[CS]-x(2)-[AT]-[CV]-[DTV]-x-[GNT]-x(3)-[DK]-x-F-x(2)-[IV]-[NP]-x(2)-[AGN]-[NS]-x-[DEP]-[IV]-[CP] Occurences: 8(8) AMD1_XENLA : 303- 351: satyi G-GtsndEMCNlYImYYmdAahAtSymTCVqTgepKlFqnIPeiANvPIP vspdm AMD2_XENLA : 305- 353: satyi G-GtakdEMCNlYImYYmdAahAtSymTCVqTgnpKlFenIPeiANvPIP vspdm AMD_BOVIN : 302- 350: evthi G-GtssdEMCNlYImYYmeAkhAvSfmTCTqNvapDiFrtIPpeANiPIP vksdm AMD_HUMAN : 302- 350: eathi G-GtssdEMCNlYImYYmeAkhAvSfmTCTqNvapDmFrtIPpeANiPIP vksdm AMD_RAT : 307- 355: eathi G-GtssdEMCNlYImYYmeAkyAlSfmTCTkNvapDmFrtIPaeANiPIP vkpdm DOPO_BOVIN : 473- 521: latvg GfGile-EMCVnYVhYYpqTqlElCksAVDpGflhKyFrlVNrfNSeEVC tcpqa DOPO_HUMAN : 466- 514: latvg GfGile-EMCVnYVhYYpqTqlElCktAVDaGflqKyFhlINrfNNeDVC tcpqa DOPO_RAT : 483- 531: matvg GfGile-EMCVnYVhYYpkTelElCksAVDdGflqKyFhiVNrfGNeEVC tcpqa L 12: 88.7928 8( 8) R-x(2)-[AV]-T-x-[GI]-G-x(0,1)-G-x(3,4)-E-M-C-[NV]-x-Y-[IV]-x-Y-Y-x(2)-[AT]-x(2)-[AE]-x-[CS]-x(2)-[AT]-[CV]-[DTV]-x-[GNT]-x(3)-[DK]-x-F-x(2)-[IV]-[NP] Occurences: 8(8) AMD1_XENLA : 296- 343: ftgkg RtsATyIG-GtsndEMCNlYImYYmdAahAtSymTCVqTgepKlFqnIP eianv AMD2_XENLA : 298- 345: ftgkg RmsATyIG-GtakdEMCNlYImYYmdAahAtSymTCVqTgnpKlFenIP eianv AMD_BOVIN : 295- 342: ftgeg RteVThIG-GtssdEMCNlYImYYmeAkhAvSfmTCTqNvapDiFrtIP peani AMD_HUMAN : 295- 342: ftgeg RteAThIG-GtssdEMCNlYImYYmeAkhAvSfmTCTqNvapDmFrtIP peani AMD_RAT : 300- 347: ftgeg RteAThIG-GtssdEMCNlYImYYmeAkyAlSfmTCTkNvapDmFrtIP aeani DOPO_BOVIN : 466- 513: ynted RrlATvGGfGile-EMCVnYVhYYpqTqlElCksAVDpGflhKyFrlVN rfnse DOPO_HUMAN : 459- 506: ynted RelATvGGfGile-EMCVnYVhYYpqTqlElCktAVDaGflqKyFhlIN rfnne DOPO_RAT : 476- 523: ynten RtmATvGGfGile-EMCVnYVhYYpkTelElCksAVDdGflqKyFhiVN rfgne M 13: 88.7597 8( 8) C-x(2,3)-T-x(2,3)-R-x(2)-[AV]-T-x-[GI]-G-x-[GT]-x(2)-[DE]-E-M-C-[NV]-x-Y-[IV]-x-Y-Y-x(2)-[AT]-x(2)-[AE]-x-[CS]-x(2)-[AT]-[CV]-[DTV]-x-[GNT]-x(3)-[DK] Occurences: 8(8) AMD1_XENLA : 289- 337: iiatr Clf-TgkgRtsATyIGgTsnDEMCNlYImYYmdAahAtSymTCVqTgepK lfqni AMD2_XENLA : 291- 339: iiatr Clf-TgkgRmsATyIGgTakDEMCNlYImYYmdAahAtSymTCVqTgnpK lfeni AMD_BOVIN : 288- 336: ilaar Cvf-TgegRteVThIGgTssDEMCNlYImYYmeAkhAvSfmTCTqNvapD ifrti AMD_HUMAN : 288- 336: llaar Cvf-TgegRteAThIGgTssDEMCNlYImYYmeAkhAvSfmTCTqNvapD mfrti AMD_RAT : 293- 341: ilaar Cvf-TgegRteAThIGgTssDEMCNlYImYYmeAkyAlSfmTCTkNvapD mfrti DOPO_BOVIN : 459- 507: vlits CtynTed-RrlATvGGfGilEEMCVnYVhYYpqTqlElCksAVDpGflhK yfrlv DOPO_HUMAN : 452- 500: vlits CtynTed-RelATvGGfGilEEMCVnYVhYYpqTqlElCktAVDaGflqK yfhli DOPO_RAT : 469- 517: vlits CtynTen-RtmATvGGfGilEEMCVnYVhYYpkTelElCksAVDdGflqK yfhiv N 14: 88.7579 8( 8) G-G-x-[AGS]-x(2)-E-x(0,1)-M-C-[NV]-x-Y-[IV]-x-Y-Y-x(2)-[AT]-x(2)-[AE]-x-[CS]-x(2)-[AT]-[CV]-[DTV]-x-[GNT]-x(3)-[DK]-x-F-x(2)-[IV]-[NP]-x(2)-[AGN]-[NS]-x-[DEP]-[IV] Occurences: 8(8) AMD1_XENLA : 303- 350: satyi GGtSndE-MCNlYImYYmdAahAtSymTCVqTgepKlFqnIPeiANvPI pvspd AMD2_XENLA : 305- 352: satyi GGtAkdE-MCNlYImYYmdAahAtSymTCVqTgnpKlFenIPeiANvPI pvspd AMD_BOVIN : 302- 349: evthi GGtSsdE-MCNlYImYYmeAkhAvSfmTCTqNvapDiFrtIPpeANiPI pvksd AMD_HUMAN : 302- 349: eathi GGtSsdE-MCNlYImYYmeAkhAvSfmTCTqNvapDmFrtIPpeANiPI pvksd AMD_RAT : 307- 354: eathi GGtSsdE-MCNlYImYYmeAkyAlSfmTCTkNvapDmFrtIPaeANiPI pvkpd DOPO_BOVIN : 472- 520: rlatv GGfGilEeMCVnYVhYYpqTqlElCksAVDpGflhKyFrlVNrfNSeEV ctcpq DOPO_HUMAN : 465- 513: elatv GGfGilEeMCVnYVhYYpqTqlElCktAVDaGflqKyFhlINrfNNeDV ctcpq DOPO_RAT : 482- 530: tmatv GGfGilEeMCVnYVhYYpkTelElCksAVDdGflqKyFhiVNrfGNeEV ctcpq O 15: 87.3201 8( 8) T-x-[GI]-G-x(0,1)-G-x(3,4)-E-M-C-[NV]-x-Y-[IV]-x-Y-Y-x(2)-[AT]-x(2)-[AE]-x-[CS]-x(2)-[AT]-[CV]-[DTV]-x-[GNT]-x(3)-[DK]-x-F-x(2)-[IV]-[NP]-x(2)-[AGN]-[NS] Occurences: 8(8) AMD1_XENLA : 300- 347: grtsa TyIG-GtsndEMCNlYImYYmdAahAtSymTCVqTgepKlFqnIPeiAN vpipv AMD2_XENLA : 302- 349: grmsa TyIG-GtakdEMCNlYImYYmdAahAtSymTCVqTgnpKlFenIPeiAN vpipv AMD_BOVIN : 299- 346: grtev ThIG-GtssdEMCNlYImYYmeAkhAvSfmTCTqNvapDiFrtIPpeAN ipipv AMD_HUMAN : 299- 346: grtea ThIG-GtssdEMCNlYImYYmeAkhAvSfmTCTqNvapDmFrtIPpeAN ipipv AMD_RAT : 304- 351: grtea ThIG-GtssdEMCNlYImYYmeAkyAlSfmTCTkNvapDmFrtIPaeAN ipipv DOPO_BOVIN : 470- 517: drrla TvGGfGile-EMCVnYVhYYpqTqlElCksAVDpGflhKyFrlVNrfNS eevct DOPO_HUMAN : 463- 510: drela TvGGfGile-EMCVnYVhYYpqTqlElCktAVDaGflqKyFhlINrfNN edvct DOPO_RAT : 480- 527: nrtma TvGGfGile-EMCVnYVhYYpkTelElCksAVDdGflqKyFhiVNrfGN eevct P 16: 86.6172 8( 8) T-x(1,2)-G-G-x-[AGS]-x(2)-E-x(0,1)-M-C-[NV]-x-Y-[IV]-x-Y-Y-x(2)-[AT]-x(2)-[AE]-x-[CS]-x(2)-[AT]-[CV]-[DTV]-x-[GNT]-x(3)-[DK]-x-F-x(2)-[IV]-[NP]-x(2)-[AGN]-[NS] Occurences: 8(8) AMD1_XENLA : 300- 347: grtsa TyiGGtSndE-MCNlYImYYmdAahAtSymTCVqTgepKlFqnIPeiAN vpipv AMD2_XENLA : 302- 349: grmsa TyiGGtAkdE-MCNlYImYYmdAahAtSymTCVqTgnpKlFenIPeiAN vpipv AMD_BOVIN : 299- 346: grtev ThiGGtSsdE-MCNlYImYYmeAkhAvSfmTCTqNvapDiFrtIPpeAN ipipv AMD_HUMAN : 299- 346: grtea ThiGGtSsdE-MCNlYImYYmeAkhAvSfmTCTqNvapDmFrtIPpeAN ipipv AMD_RAT : 304- 351: grtea ThiGGtSsdE-MCNlYImYYmeAkyAlSfmTCTkNvapDmFrtIPaeAN ipipv DOPO_BOVIN : 470- 517: drrla Tv-GGfGilEeMCVnYVhYYpqTqlElCksAVDpGflhKyFrlVNrfNS eevct DOPO_HUMAN : 463- 510: drela Tv-GGfGilEeMCVnYVhYYpqTqlElCktAVDaGflqKyFhlINrfNN edvct DOPO_RAT : 480- 527: nrtma Tv-GGfGilEeMCVnYVhYYpkTelElCksAVDdGflqKyFhiVNrfGN eevct Q 17: 86.1645 8( 8) G-G-x(4,5)-E-M-C-[NV]-x-Y-[IV]-x-Y-Y-x(2)-[AT]-x(2)-[AE]-x-[CS]-x(2)-[AT]-[CV]-[DTV]-x-[GNT]-x(3)-[DK]-x-F-x(2)-[IV]-[NP]-x(2)-[AGN]-[NS]-x-[DEP]-[IV] Occurences: 8(8) AMD1_XENLA : 303- 350: satyi GGtsnd-EMCNlYImYYmdAahAtSymTCVqTgepKlFqnIPeiANvPI pvspd AMD2_XENLA : 305- 352: satyi GGtakd-EMCNlYImYYmdAahAtSymTCVqTgnpKlFenIPeiANvPI pvspd AMD_BOVIN : 302- 349: evthi GGtssd-EMCNlYImYYmeAkhAvSfmTCTqNvapDiFrtIPpeANiPI pvksd AMD_HUMAN : 302- 349: eathi GGtssd-EMCNlYImYYmeAkhAvSfmTCTqNvapDmFrtIPpeANiPI pvksd AMD_RAT : 307- 354: eathi GGtssd-EMCNlYImYYmeAkyAlSfmTCTkNvapDmFrtIPaeANiPI pvkpd DOPO_BOVIN : 472- 520: rlatv GGfgileEMCVnYVhYYpqTqlElCksAVDpGflhKyFrlVNrfNSeEV ctcpq DOPO_HUMAN : 465- 513: elatv GGfgileEMCVnYVhYYpqTqlElCktAVDaGflqKyFhlINrfNNeDV ctcpq DOPO_RAT : 482- 530: tmatv GGfgileEMCVnYVhYYpkTelElCksAVDdGflqKyFhiVNrfGNeEV ctcpq R 18: 86.0739 8( 8) T-x(2,3)-R-x(3)-T-x-[GI]-G-x-[GT]-x(2)-[DE]-E-M-C-[NV]-x-Y-[IV]-x-Y-Y-x(2)-[AT]-x(2)-[AE]-x-[CS]-x(2)-[AT]-[CV]-[DTV]-x-[GNT]-x(3)-[DK]-x-F Occurences: 8(8) AMD1_XENLA : 292- 339: trclf TgkgRtsaTyIGgTsnDEMCNlYImYYmdAahAtSymTCVqTgepKlF qnipe AMD2_XENLA : 294- 341: trclf TgkgRmsaTyIGgTakDEMCNlYImYYmdAahAtSymTCVqTgnpKlF enipe AMD_BOVIN : 291- 338: arcvf TgegRtevThIGgTssDEMCNlYImYYmeAkhAvSfmTCTqNvapDiF rtipp AMD_HUMAN : 291- 338: arcvf TgegRteaThIGgTssDEMCNlYImYYmeAkhAvSfmTCTqNvapDmF rtipp AMD_RAT : 296- 343: arcvf TgegRteaThIGgTssDEMCNlYImYYmeAkyAlSfmTCTkNvapDmF rtipa DOPO_BOVIN : 463- 509: sctyn Ted-RrlaTvGGfGilEEMCVnYVhYYpqTqlElCksAVDpGflhKyF rlvnr DOPO_HUMAN : 456- 502: sctyn Ted-RelaTvGGfGilEEMCVnYVhYYpqTqlElCktAVDaGflqKyF hlinr DOPO_RAT : 473- 519: sctyn Ten-RtmaTvGGfGilEEMCVnYVhYYpkTelElCksAVDdGflqKyF hivnr S 19: 85.6490 8( 8) P-x(3)-G-x(3)-G-[GS]-x-[GST]-[GS]-S-[KR]-[FY]-[FL]-x-L-[EQ]-V-H-Y-x-[DN]-[IPV]-x-[ANV]-[FI]-x-[DG]-x(2)-[DK]-[DS]-[CS]-[GST]-[GI] Occurences: 8(8) AMD1_XENLA : 147- 184: pptkl PegvGfrvGGkSGSRYFvLQVHYgNVkAFqDkhKDCTG vtvrv AMD2_XENLA : 149- 186: pptkl PegvGfqvGGkSGSRYFvLQVHYgDVkAFqDkhKDCTG vtvri AMD_BOVIN : 146- 183: pptrl PkgvGfrvGGeTGSKYFvLQVHYgDIsAFrDnhKDCSG vslhl AMD_HUMAN : 146- 183: pptrl PkgvGfrvGGeTGSKYFvLQVHYgDIsAFrDnnKDCSG vslhl AMD_RAT : 151- 188: pptrl PkgvGfrvGGeTGSKYFvLQVHYgDIsAFrDnhKDCSG vsvhl DOPO_BOVIN : 305- 342: kafyy PeeaGlafGGpGSSRFLrLEVHYhNPlVItGrrDSSGI rlyyt DOPO_HUMAN : 298- 335: kafyy PeeaGlafGGpGSSRYLrLEVHYhNPlVIeGrnDSSGI rlyyt DOPO_RAT : 315- 352: kafyy PeeaGvplGSsGSSRFLrLEVHYhNPrNIqGrrDSSGI rlhyt T 20: 85.1490 8( 8) P-x(3)-G-x(2,3)-G-[GS]-x-[GST]-[GS]-S-[KR]-[FY]-[FL]-x-L-[EQ]-V-H-Y-x-[DN]-[IPV]-x-[ANV]-[FI]-x-[DG]-x(2)-[DK]-[DS]-[CS]-[GST]-[GI] Occurences: 8(8) AMD1_XENLA : 147- 184: pptkl PegvGfrvGGkSGSRYFvLQVHYgNVkAFqDkhKDCTG vtvrv AMD2_XENLA : 149- 186: pptkl PegvGfqvGGkSGSRYFvLQVHYgDVkAFqDkhKDCTG vtvri AMD_BOVIN : 146- 183: pptrl PkgvGfrvGGeTGSKYFvLQVHYgDIsAFrDnhKDCSG vslhl AMD_HUMAN : 146- 183: pptrl PkgvGfrvGGeTGSKYFvLQVHYgDIsAFrDnnKDCSG vslhl AMD_RAT : 151- 188: pptrl PkgvGfrvGGeTGSKYFvLQVHYgDIsAFrDnhKDCSG vsvhl DOPO_BOVIN : 305- 342: kafyy PeeaGlafGGpGSSRFLrLEVHYhNPlVItGrrDSSGI rlyyt DOPO_HUMAN : 298- 335: kafyy PeeaGlafGGpGSSRYLrLEVHYhNPlVIeGrnDSSGI rlyyt DOPO_RAT : 315- 352: kafyy PeeaGvplGSsGSSRFLrLEVHYhNPrNIqGrrDSSGI rlhyt Number of patterns evaluated by Pratt:27001 Total running time: 27 seconds