------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 29 sequences from file CPSASE_2 PATTERN CONSERVATION: CM: min Nr of Seqs to Match 29 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 21 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename CPSASE_2.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: ACCA_MYCLE 598 ACCA_MYCTU 654 ACCC_ANASP 447 ACCC_ECOLI 449 ACCC_HAEIN 448 ACCC_PSEAE 449 CARB_BACCL 1065 CARB_BACSU 1071 CARB_ECOLI 1072 CARB_METBA 398 CARB_TRICU 1176 CARB_YEAST 1118 CARY_BACSU 1027 COAC_CHICK 2324 COAC_RAT 2345 COAC_YEAST 2237 CPSM_HUMAN 1500 CPSM_RAT 1500 DUR1_YEAST 1835 HFA1_YEAST 825 PCCA_HUMAN 702 PCCA_RAT 704 PYC1_YEAST 1178 PYC2_YEAST 1180 PYR1_DICDI 2185 PYR1_DROME 2236 PYR1_MESAU 2225 PYR1_SCHPO 2244 PYR1_YEAST 2214 Pratt run started at Thu Feb 6 19:10:49 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 12.5102 42( 29) P-x(4)-A-x(5)-G 2: 12.5102 49( 29) E-x-N-x-R 3: 12.0102 64( 29) A-x-E-x(4,5)-G 4: 12.0102 46( 29) A-x-E-x(3,4)-G 5: 12.0102 58( 29) G-x(1,2)-P-x(2)-I 6: 12.0102 74( 29) A-A-x(3,4)-G 7: 12.0102 87( 29) A-x(3)-A-x(3,4)-G 8: 12.0102 34( 29) N-x(1,2)-R-x(5)-P 9: 12.0102 73( 29) A-x(3)-G-x(2,3)-V 10: 12.0102 68( 29) A-x(3)-G-x(3,4)-L 11: 12.0102 46( 29) L-x(1,2)-N-x(3)-A 12: 12.0102 55( 29) A-G-x(0,1)-V 13: 12.0102 75( 29) G-x(3)-E-x(4,5)-A 14: 12.0102 54( 29) G-x(1,2)-A-x-E 15: 12.0102 66( 29) A-x(3,4)-G-x(3)-L 16: 12.0102 61( 29) E-x(4)-A-x(2,3)-G 17: 11.5102 62( 29) G-E-x(3,5)-I 18: 11.5102 103( 29) A-x(1,2)-E-x(4,5)-G 19: 11.5102 70( 29) A-x(1,2)-E-x(3,4)-G 20: 11.5102 60( 29) I-x(4,5)-A-x(1,2)-E Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 26.3427 37( 29) E-x-N-x-R-x-[QS]-x-[EST]-x-[APT]-x-[ASTV]-[ES] B 2: 15.2007 30( 29) N-x(1,2)-R-x(5)-P-x(2)-[ES] C 3: 14.7509 36( 29) P-[GILV]-x(3)-A-x(5)-G D 4: 13.6594 36( 29) A-x-E-x(3,4)-G-x(2)-[AGILPV] E 5: 13.6290 44( 29) A-G-x(0,1)-V-x(4)-[ADGSTV] F 6: 12.0102 64( 29) A-x-E-x(4,5)-G G 7: 12.0102 58( 29) G-x(1,2)-P-x(2)-I H 8: 12.0102 74( 29) A-A-x(3,4)-G I 9: 12.0102 87( 29) A-x(3)-A-x(3,4)-G J 10: 12.0102 73( 29) A-x(3)-G-x(2,3)-V K 11: 12.0102 68( 29) A-x(3)-G-x(3,4)-L L 12: 12.0102 46( 29) L-x(1,2)-N-x(3)-A M 13: 12.0102 75( 29) G-x(3)-E-x(4,5)-A N 14: 12.0102 54( 29) G-x(1,2)-A-x-E O 15: 12.0102 66( 29) A-x(3,4)-G-x(3)-L P 16: 12.0102 61( 29) E-x(4)-A-x(2,3)-G Q 17: 11.5102 62( 29) G-E-x(3,5)-I R 18: 11.5102 103( 29) A-x(1,2)-E-x(4,5)-G S 19: 11.5102 70( 29) A-x(1,2)-E-x(3,4)-G T 20: 11.5102 60( 29) I-x(4,5)-A-x(1,2)-E Best patterns with alignements: fitness hits(seqs) Pattern A 1: 26.3427 37( 29) E-x-N-x-R-x-[QS]-x-[EST]-x-[APT]-x-[ASTV]-[ES] Occurences: 37(29) ACCA_MYCLE : 295- 308: lisfl EvNtRlQvEhPvTE ettgi ACCA_MYCTU : 290- 303: efffm EmNtRlQvEhPvTE aitgl ACCC_ANASP : 289- 302: qfyfm EmNtRiQvEhPvTE mvtgv ACCC_ECOLI : 288- 301: efyfi EmNtRiQvEhPvTE mitgv ACCC_HAEIN : 288- 301: efyfi EmNtRiQvEhPvTE mitgv ACCC_PSEAE : 288- 301: rfyfi EmNtRvQvEhPvSE mvtgv CARB_BACCL : 298- 311: ryyvi EvNpRvSrSsAlAS katgy CARB_BACSU : 298- 311: qyyii EvNpRvSrSsAlAS katgy CARB_ECOLI : 298- 311: rlivi EmNpRvSrSsAlAS katgf CARB_METBA : 158- 171: kvyvl EaNpRsSrTiPfVS kavgi CARB_TRICU : 362- 375: dyrvi EmNaRlSrSsAlAS katgy CARB_TRICU : 902- 915: elkvi EcNlRaSrSfPfVS kvlgh CARB_YEAST : 317- 330: dyrvi EvNaRlSrSsAlAS katgy CARB_YEAST : 861- 874: tlkvi EcNiRaSrSfPfVS kvlgv CARY_BACSU : 298- 311: qyyvi EvNpRvSrSsAlAS katgy CARY_BACSU : 834- 847: nilvl EvNpRaSrTvPvVS kvmgv COAC_CHICK : 437- 450: sfyfl ElNpRlQvEhPcTE mvadv COAC_RAT : 436- 449: sfyfl ElNpRlQvEhPcTE mvadv COAC_YEAST : 379- 392: kfyfl ElNpRlQvEhPtTE mvsgv CPSM_HUMAN : 1255- 1268: dvlvn EcNlRaSrSfPsVS ktlgv CPSM_RAT : 714- 727: eycii EvNaRlSrSsAlAS katgy CPSM_RAT : 1255- 1268: dvlvi EcNlRaSrSfPfVS ktlgv DUR1_YEAST : 919- 932: efyfl EvNtRlQvEhPiTE mvtgl HFA1_YEAST : 331- 344: kfyfl ElNpRlQvEhPtTE misgv PCCA_HUMAN : 324- 337: nfyfl EmNtRlQvEhPvTE cihwp PCCA_RAT : 325- 338: nfyfl EmNtRlQvEhPvTE citgl PYC1_YEAST : 308- 321: rhyfi EiNpRiQvEhTiTE eitgi PYC2_YEAST : 309- 322: rhyfi EiNpRiQvEhTiTE eitgi PYR1_DICDI : 654- 667: eycii EvNaRlSrSsAlAS katgy PYR1_DICDI : 1192- 1205: eikvi EcNlRcSrSfPfVS ktlni PYR1_DROME : 696- 709: qyyii EvNeRlSrTsAlAS kapgy PYR1_DROME : 1233- 1246: elkvi EcNvRvSrSfPfVS ktldh PYR1_MESAU : 682- 695: qyyii EvNaRlSrSsAlAS katgy PYR1_MESAU : 1214- 1227: qlkvi EcNvRvSrSfPfVS ktlgv PYR1_SCHPO : 761- 774: eycii EvNaRlSrSsAlAS katgy PYR1_SCHPO : 1295- 1308: eikvi EcNvRaSrSfPfVS kvigv PYR1_YEAST : 725- 738: dycii EvNaRlSrSsAlAS katgy B 2: 15.2007 30( 29) N-x(1,2)-R-x(5)-P-x(2)-[ES] Occurences: 30(29) ACCA_MYCLE : 297- 308: sflev Nt-RlqvehPvtE ettgi ACCA_MYCTU : 292- 303: ffmem Nt-RlqvehPvtE aitgl ACCC_ANASP : 291- 302: yfmem Nt-RiqvehPvtE mvtgv ACCC_ECOLI : 290- 301: yfiem Nt-RiqvehPvtE mitgv ACCC_HAEIN : 290- 301: yfiem Nt-RiqvehPvtE mitgv ACCC_PSEAE : 290- 301: yfiem Nt-RvqvehPvsE mvtgv CARB_BACCL : 834- 845: yvlev Np-RssrtvPflS kitgv CARB_BACSU : 834- 845: yvlev Np-RssrtvPflS kitgi CARB_ECOLI : 842- 853: yliev Np-RaartvPfvS katgv CARB_METBA : 160- 171: yvlea Np-RssrtiPfvS kavgi CARB_TRICU : 904- 915: kviec Nl-RasrsfPfvS kvlgh CARB_YEAST : 863- 874: kviec Ni-RasrsfPfvS kvlgv CARY_BACSU : 836- 847: lvlev Np-RasrtvPvvS kvmgv COAC_CHICK : 439- 450: yflel Np-RlqvehPctE mvadv COAC_RAT : 438- 449: yflel Np-RlqvehPctE mvadv COAC_YEAST : 381- 392: yflel Np-RlqvehPttE mvsgv CPSM_HUMAN : 1257- 1268: lvnec Nl-RasrsfPsvS ktlgv CPSM_RAT : 1257- 1268: lviec Nl-RasrsfPfvS ktlgv DUR1_YEAST : 921- 932: yflev Nt-RlqvehPitE mvtgl HFA1_YEAST : 333- 344: yflel Np-RlqvehPttE misgv PCCA_HUMAN : 326- 337: yflem Nt-RlqvehPvtE cihwp PCCA_RAT : 327- 338: yflem Nt-RlqvehPvtE citgl PYC1_YEAST : 960- 972: sdvlr NkrRkltcrPglE lepfd PYC2_YEAST : 961- 973: sdvlr NkrRkltcrPglE lepfd PYR1_DICDI : 1194- 1205: kviec Nl-RcsrsfPfvS ktlni PYR1_DROME : 1235- 1246: kviec Nv-RvsrsfPfvS ktldh PYR1_MESAU : 1216- 1227: kviec Nv-RvsrsfPfvS ktlgv PYR1_MESAU : 1735- 1746: qrlhh Np-RrifhlPlqE dtyve PYR1_SCHPO : 1297- 1308: kviec Nv-RasrsfPfvS kvigv PYR1_YEAST : 1263- 1274: kviec Nv-RasrsfPfiS kvvgv C 3: 14.7509 36( 29) P-[GILV]-x(3)-A-x(5)-G Occurences: 36(29) ACCA_MYCLE : 161- 172: kehgv PIaikAafgggG kgmkv ACCA_MYCTU : 593- 604: vvspm PGsviAvqvesG sqisa ACCC_ANASP : 155- 166: kdigy PVmikAtagggG rgmrl ACCC_ECOLI : 155- 166: krigy PViikAsggggG rgmrv ACCC_HAEIN : 155- 166: krigy PIiikAsggggG rgmrv ACCC_PSEAE : 155- 166: revgy PViikAaggggG rgmrv CARB_BACCL : 317- 328: katgy PIaklAakiavG ltlde CARB_BACSU : 317- 328: katgy PIaklAakiavG lslde CARB_ECOLI : 317- 328: katgf PIakvAaklavG ytlde CARB_ECOLI : 859- 870: katgv PLakvAarvmaG kslae CARB_METBA : 177- 188: kavgi PLakiAakvivG hslks CARB_TRICU : 381- 392: katgy PLaytAakialG htlre CARB_YEAST : 336- 347: katgy PLaytAakiglG ytlpe CARY_BACSU : 317- 328: katgy PIakmAaklavG ytlde COAC_CHICK : 307- 318: eevgy PVmikAsegggG kgirk COAC_RAT : 306- 317: eevgy PVmikAsegggG kgirk COAC_YEAST : 248- 259: krigf PVmikAsegggG kgirq COAC_YEAST : 906- 917: gavve PLadiAhkysnG leahe CPSM_HUMAN : 733- 744: kttgy PLafiAakialG iplpg CPSM_RAT : 733- 744: katgy PLafiAakialG iplpe DUR1_YEAST : 304- 315: eidfe PLlelArclyeG twvae HFA1_YEAST : 200- 211: kligf PVmikAsegggG kgirr PCCA_HUMAN : 190- 201: reigy PVmikAsagggG kgmri PCCA_HUMAN : 641- 652: lrspm PGvvvAvsvkpG davae PCCA_RAT : 191- 202: reigy PVmikAsagggG kgmri PCCA_RAT : 643- 654: lrspk PGvvvAvsvkpG dmvae PYC1_YEAST : 174- 185: neygy PViikAafgggG rgmrv PYC2_YEAST : 175- 186: neygy PViikAafgggG rgmrv PYR1_DICDI : 523- 534: ekigy PVivrAayclgG lgsgf PYR1_DROME : 565- 576: srlgy PVmarAafslgG lgsgf PYR1_DROME : 715- 726: kapgy PLayvAakvglG lplpd PYR1_MESAU : 551- 562: erlgy PVlvrAafalgG lgsgf PYR1_MESAU : 701- 712: katgy PLayvAaklalG iplpe PYR1_MESAU : 1894- 1905: cypap PVprqAspqnlG ssgll PYR1_SCHPO : 630- 641: kdisf PVivrAayalgG lgsgf PYR1_YEAST : 594- 605: keigf PVivrAayalgG lgsgf D 4: 13.6594 36( 29) A-x-E-x(3,4)-G-x(2)-[AGILPV] Occurences: 36(29) ACCA_MYCLE : 340- 350: ipcgh AiEfrinGedA grnfl ACCA_MYCTU : 347- 357: yaedp ArEflptGgrV lavfe ACCC_ANASP : 46- 56: lhvql AdEavciGepA saksy ACCC_ECOLI : 45- 55: khvll AdEtvciGpaP svksy ACCC_HAEIN : 45- 55: khvll AdEticiGpaP saksy ACCC_PSEAE : 45- 55: mhlsl AdEsvciGpaP atqsy CARB_BACCL : 23- 33: ivigq AaEfdyaGtqA clalk CARB_BACCL : 643- 653: tainl AaElearGvrL lgttl CARB_BACSU : 23- 33: iiigq AaEfdyaGtqA clalk CARB_BACSU : 99- 109: tglnl AvElserGvlA ecgve CARB_BACSU : 643- 653: tainl AdElsarGvkI lgtsl CARB_ECOLI : 22- 32: ivigq AcEfdysGaqA ckalr CARB_METBA : 370- 380: iaaaa AiEtmkkGeeL tiksi CARB_TRICU : 91- 101: lsigq AgEfdysGsqA ikalr CARB_YEAST : 44- 54: lsigq AgEfdysGsqA ikalk CARY_BACSU : 23- 33: iiigq AaEfdysGtqG cialk COAC_CHICK : 312- 321: pvmik AsEggg-GkgI rkvnn COAC_RAT : 311- 320: pvmik AsEggg-GkgI rkvnn COAC_YEAST : 253- 262: pvmik AsEggg-GkgI rqver COAC_YEAST : 1025- 1035: kvalq ArEiliqGalP svker COAC_YEAST : 1764- 1774: clltg ApEstnaGreV ytsnl CPSM_HUMAN : 438- 448: lsigq AgEfdysGsqA vkamk CPSM_RAT : 438- 448: lsigq AgEfdysGsqA vkamk DUR1_YEAST : 1131- 1141: dyrtp AiEvtltGpsI vfhce HFA1_YEAST : 205- 214: pvmik AsEggg-GkgI rrvdn PCCA_HUMAN : 81- 91: vhvkm AdEavcvGpaP tsksy PCCA_RAT : 82- 92: vhvkm AdEavcvGpaP tsksy PYC1_YEAST : 62- 72: thkqk AdEayviGevG qytpv PYC2_YEAST : 63- 73: mhrlk AdEayviGeeG qytpv PYR1_DICDI : 381- 391: lsigq AgEfdysGsqA ikalk PYR1_DICDI : 760- 770: mvmdg AvEgfqaGvfP tsdee PYR1_DROME : 424- 434: lsigq AgEfdysGsqA ingmr PYR1_MESAU : 409- 419: lsigq AgEfdysGsqA ikalk PYR1_SCHPO : 490- 500: lsigq AgEfdysGsqA ikalr PYR1_YEAST : 454- 464: lsigq AgEfdysGsqA ikalk PYR1_YEAST : 1970- 1979: ssfia AmErlg-GriV nvnpl E 5: 13.6290 44( 29) A-G-x(0,1)-V-x(4)-[ADGSTV] Occurences: 44(29) ACCA_MYCLE : 278- 286: ahyyg AGtVeylvG qdgli ACCA_MYCTU : 271- 279: vdyvg AGtVefivS aqrpd ACCC_ANASP : 127- 134: etmqk AG-VptvpG seglv ACCC_ECOLI : 126- 133: aamkk AG-VpcvpG sdgpl ACCC_HAEIN : 126- 133: kamkk AG-VpcvpG sdgpv ACCC_PSEAE : 126- 133: damkr AG-VptvpG sdgpl CARB_BACCL : 105- 112: velak AG-VleecG veilg CARB_BACCL : 776- 783: ehier AG-VhsgdS iavyp CARB_BACSU : 776- 783: ehier AG-VhsgdS iavyp CARB_ECOLI : 656- 663: ralea AG-VpvigT spdai CARB_ECOLI : 784- 791: ehieq AG-VhsgdS acslp CARB_METBA : 102- 109: ehiee AG-VhsgdS acvip CARB_TRICU : 712- 719: lrlkk AG-VqvlgT dpemi CARB_TRICU : 840- 847: ehven AG-VhsgdA tlvlp CARB_YEAST : 804- 811: ehven AG-VhsgdA slvlp CARY_BACSU : 778- 785: ehier AG-VhsgdS failp COAC_CHICK : 420- 428: vgyvs AGtVeylyS qdgsf COAC_CHICK : 1991- 1999: kiiqq AGqVwfpdS afkta COAC_RAT : 419- 427: vgyvs AGtVeylyS qdgsf COAC_RAT : 2013- 2021: kiiqq AGqVwfpdS afkty COAC_YEAST : 361- 369: vgyvs AGtVeylyS hddgk COAC_YEAST : 2026- 2033: dvnar AG-VlepqG mvgik CPSM_HUMAN : 68- 76: hpssv AGeVvfntG lggyp CPSM_HUMAN : 1199- 1206: ehved AG-VhsenA tlmlp CPSM_RAT : 68- 76: hpssv AGeVvfntG lggys CPSM_RAT : 1199- 1206: ehved AG-VhsgdA tlmlp DUR1_YEAST : 757- 764: qiaqk AG-VplvpG sllit DUR1_YEAST : 901- 909: lnykc AGtVefiyD ekkde HFA1_YEAST : 313- 321: vgyvs AGtVeylyS pkddk HFA1_YEAST : 705- 713: gsiie AGdViaklT ldsps PCCA_HUMAN : 307- 315: vkyss AGtVeflvD skknf PCCA_RAT : 308- 316: vkyss AGtVeflvD sqknf PYC1_YEAST : 690- 698: davkk AGgVveatV cfsgd PYC2_YEAST : 691- 699: navkk AGgVveatV cysgd PYR1_DICDI : 766- 773: vegfq AG-VfptsD eeleh PYR1_DICDI : 1136- 1143: ehven AG-VhsgdA tivcp PYR1_DROME : 1177- 1184: ehven AG-VhsgdA tlvtp PYR1_MESAU : 24- 32: aavst AGeVvfqtG mvgyp PYR1_MESAU : 491- 498: veltk AG-VlaryG vrvlg PYR1_MESAU : 1158- 1165: ehven AG-VhsgdA tlvtp PYR1_MESAU : 1494- 1502: taaal AGgVtmvcA mpntr PYR1_SCHPO : 1239- 1246: ehven AG-VhsgdA tlvlp PYR1_YEAST : 107- 115: nrihi AGlVishyT deysh PYR1_YEAST : 1205- 1212: ehven AG-VhsgdA tlivp F 6: 12.0102 64( 29) A-x-E-x(4,5)-G Occurences: 64(29) ACCA_MYCLE : 52- 59: phvrl AdEafal-G ghtsa ACCA_MYCLE : 52- 60: phvrl AdEafalgG htsae ACCA_MYCLE : 340- 347: ipcgh AiEfrin-G edagr ACCA_MYCTU : 56- 64: lgpap ArEsyldiG kvlda ACCA_MYCTU : 347- 354: yaedp ArEflpt-G grvla ACCA_MYCTU : 347- 355: yaedp ArEflptgG rvlav ACCA_MYCTU : 429- 436: lrfll AdErvrv-G dldta ACCC_ANASP : 46- 53: lhvql AdEavci-G epasa ACCC_ANASP : 120- 128: gdkst AkEtmqkaG vptvp ACCC_ECOLI : 45- 52: khvll AdEtvci-G papsv ACCC_HAEIN : 45- 52: khvll AdEtici-G papsa ACCC_PSEAE : 45- 52: mhlsl AdEsvci-G papat CARB_BACCL : 23- 30: ivigq AaEfdya-G tqacl CARB_BACCL : 99- 106: tglnl AvElaka-G vleec CARB_BACCL : 643- 650: tainl AaElear-G vrllg CARB_BACCL : 716- 724: vlggr AmEivynrG ellhy CARB_BACSU : 23- 30: iiigq AaEfdya-G tqacl CARB_BACSU : 99- 106: tglnl AvElser-G vlaec CARB_BACSU : 643- 650: tainl AdElsar-G vkilg CARB_ECOLI : 22- 29: ivigq AcEfdys-G aqack CARB_ECOLI : 98- 105: talnc AlElerq-G vleef CARB_ECOLI : 700- 708: taiem AvEkakeiG yplvv CARB_ECOLI : 816- 823: qvqkl AfElqvr-G lmnvq CARB_METBA : 18- 26: tsqke AiEvakriG fpvlv CARB_METBA : 370- 377: iaaaa AiEtmkk-G eelti CARB_TRICU : 91- 98: lsigq AgEfdys-G sqaik CARB_TRICU : 756- 764: sslas AkEfanrvG ypvli CARB_YEAST : 44- 51: lsigq AgEfdys-G sqaik CARY_BACSU : 23- 30: iiigq AaEfdys-G tqgci CARY_BACSU : 99- 106: talnl AvEleet-G vlkeh CARY_BACSU : 646- 654: qtain AaEalekaG itllg COAC_CHICK : 312- 320: pvmik AsEggggkG irkvn COAC_CHICK : 1679- 1687: vlflr AsElarthG ipriy COAC_RAT : 311- 319: pvmik AsEggggkG irkvn COAC_RAT : 1701- 1709: llflr AsElaraeG ipriy COAC_YEAST : 253- 261: pvmik AsEggggkG irqve COAC_YEAST : 1025- 1032: kvalq ArEiliq-G alpsv COAC_YEAST : 1764- 1771: clltg ApEstna-G revyt CPSM_HUMAN : 68- 76: hpssv AgEvvfntG lggyp CPSM_HUMAN : 438- 445: lsigq AgEfdys-G sqavk CPSM_RAT : 68- 76: hpssv AgEvvfntG lggys CPSM_RAT : 438- 445: lsigq AgEfdys-G sqavk CPSM_RAT : 1115- 1123: ntlne AlEfansvG ypcll DUR1_YEAST : 286- 294: vlfsn AvEnlsrtG anvie DUR1_YEAST : 1035- 1043: sklnq AlEetkvyG citni DUR1_YEAST : 1079- 1086: qyept AiEitlp-G ahtsi DUR1_YEAST : 1131- 1138: dyrtp AiEvtlt-G psivf HFA1_YEAST : 190- 198: ssped AlEkakliG fpvmi HFA1_YEAST : 205- 213: pvmik AsEggggkG irrvd HFA1_YEAST : 720- 728: dspsk AnEsslyrG elpvl PCCA_HUMAN : 81- 88: vhvkm AdEavcv-G papts PCCA_HUMAN : 132- 140: farcl AaEdvvfiG pdtha PCCA_RAT : 82- 89: vhvkm AdEavcv-G papts PCCA_RAT : 133- 141: fakcl AaEdvtfiG pdtha PYC1_YEAST : 62- 69: thkqk AdEayvi-G evgqy PYC2_YEAST : 63- 70: mhrlk AdEayvi-G eegqy PYR1_DICDI : 142- 150: ikeyk AaEnnkktG ekrkn PYR1_DICDI : 381- 388: lsigq AgEfdys-G sqaik PYR1_DICDI : 760- 767: mvmdg AvEgfqa-G vfpts PYR1_DROME : 424- 431: lsigq AgEfdys-G sqain PYR1_DROME : 1093- 1101: tnlqs AiEfceevG ypclv PYR1_MESAU : 24- 32: aavst AgEvvfqtG mvgyp PYR1_MESAU : 409- 416: lsigq AgEfdys-G sqaik PYR1_SCHPO : 490- 497: lsigq AgEfdys-G sqaik PYR1_YEAST : 44- 52: aeksv AgElvfqtG mvgyp PYR1_YEAST : 454- 461: lsigq AgEfdys-G sqaik G 7: 12.0102 58( 29) G-x(1,2)-P-x(2)-I Occurences: 58(29) ACCA_MYCLE : 111- 117: gliwi GpsPqsI rdlgd ACCA_MYCLE : 159- 164: fakeh Gv-PiaI kaafg ACCA_MYCTU : 152- 157: aaaev Gy-PvlI kpsag ACCC_ANASP : 105- 111: hiafi GptPeaI rlmgd ACCC_ANASP : 153- 158: lakdi Gy-PvmI katag ACCC_ANASP : 415- 420: ecait Gl-PttI gfhqr ACCC_ECOLI : 153- 158: iakri Gy-PviI kasgg ACCC_ECOLI : 318- 323: lriaa Gq-PlsI kqeev ACCC_HAEIN : 153- 158: iakri Gy-PiiI kasgg ACCC_PSEAE : 153- 158: iarev Gy-PviI kaagg CARB_BACCL : 14- 20: tilvi GsgPivI gqaae CARB_BACCL : 558- 564: svivl GsgPirI gqgie CARB_BACSU : 14- 20: kilvi GsgPiiI gqaae CARB_BACSU : 558- 564: svmvl GsgPirI gqgve CARB_ECOLI : 13- 19: silil GagPivI gqace CARB_ECOLI : 162- 167: vaadv Gf-PciI rpsft CARB_ECOLI : 565- 571: kimvl GggPnrI gqgie CARB_ECOLI : 566- 571: imvlg Gg-PnrI gqgie CARB_ECOLI : 662- 668: gvpvi GtsPdaI draed CARB_METBA : 314- 319: kkvhd Gs-PnvI dmmrr CARB_TRICU : 699- 705: vvsvg GqlPqnI alrlk CARB_TRICU : 718- 724: gvqvl GtdPemI dsaed CARB_TRICU : 764- 769: fanrv Gy-PvlI rpsyv CARB_YEAST : 663- 669: iisvg GqlPqnI alkly CARB_YEAST : 682- 688: gcnim GtnPndI draen CARY_BACSU : 14- 20: silvi GsgPiiI gqaae CARY_BACSU : 163- 168: faesi Gf-PviI rpayt CARY_BACSU : 562- 568: ralii GsgPirI gqgve CARY_BACSU : 705- 710: kasei Gy-PvlI rpsyv COAC_CHICK : 305- 310: aaeev Gy-PvmI kaseg COAC_RAT : 304- 309: aaeev Gy-PvmI kaseg COAC_YEAST : 246- 251: kakri Gf-PvmI kaseg COAC_YEAST : 284- 289: aneip Gs-PifI mklag CPSM_HUMAN : 78- 84: fntgl GgyPeaI tdpay CPSM_HUMAN : 79- 84: ntglg Gy-PeaI tdpay CPSM_HUMAN : 581- 586: aadti Gy-PvmI rsaya CPSM_HUMAN : 980- 986: gmmvl GcgPyhI gssve CPSM_HUMAN : 1077- 1083: gvkim GtsPlqI draed CPSM_RAT : 581- 586: aadti Gy-PvmI rsaya CPSM_RAT : 980- 986: gimvl GcgPyhI gssve CPSM_RAT : 1077- 1083: gvkim GtsPlqI draed DUR1_YEAST : 431- 436: gfrdd Gl-PngI tligk DUR1_YEAST : 1338- 1344: ainft GdePviI tcdgp HFA1_YEAST : 198- 203: kakli Gf-PvmI kaseg PCCA_HUMAN : 188- 193: iarei Gy-PvmI kasag PCCA_RAT : 189- 194: iarei Gy-PvmI kasag PYC1_YEAST : 28- 34: lvanr GeiPirI frtah PYC1_YEAST : 153- 158: vptvp Gt-PgpI etvee PYC1_YEAST : 172- 177: fvney Gy-PviI kaafg PYC2_YEAST : 29- 35: lvanr GeiPirI frsah PYC2_YEAST : 154- 159: vptvp Gt-PgpI etvqe PYC2_YEAST : 173- 178: fvney Gy-PviI kaafg PYR1_DICDI : 1014- 1020: nvkvl GthPdmI dsaen PYR1_DROME : 1036- 1042: fcpmg GqlPnnI amdlh PYR1_DROME : 1054- 1060: qqevl GtsPesI dcaen PYR1_MESAU : 1036- 1042: qcrvl GtsPeaI dsaen PYR1_SCHPO : 1117- 1123: nvkil GtsPemI dgaen PYR1_YEAST : 1083- 1089: nvkil GtsPdmI dsaen H 8: 12.0102 74( 29) A-A-x(3,4)-G Occurences: 74(29) ACCA_MYCLE : 76- 81: gkild AAaks-G anaih ACCA_MYCLE : 166- 171: piaik AAfgg-G gkgmk ACCA_MYCLE : 166- 172: piaik AAfgggG kgmkv ACCA_MYCTU : 47- 52: vlead AAvrl-G papar ACCA_MYCTU : 69- 74: gkvld AAart-G aqaih ACCA_MYCTU : 147- 152: dalvt AAaev-G ypvli ACCC_ANASP : 184- 190: vklfl AAqgeaG aafgn ACCC_ANASP : 191- 197: qgeag AAfgnaG vyiek ACCC_ECOLI : 69- 74: paiis AAeit-G avaih ACCC_ECOLI : 121- 127: kvsai AAmkkaG vpcvp ACCC_HAEIN : 68- 74: ipaii AAaevtG adaih ACCC_HAEIN : 69- 74: paiia AAevt-G adaih ACCC_PSEAE : 68- 74: ipaii AAaevtG ataih ACCC_PSEAE : 69- 74: paiia AAevt-G ataih ACCC_PSEAE : 160- 165: pviik AAggg-G grgmr ACCC_PSEAE : 160- 166: pviik AAggggG rgmrv ACCC_PSEAE : 428- 433: dlvrd AAfck-G gvnih ACCC_PSEAE : 428- 434: dlvrd AAfckgG vnihy CARB_BACCL : 322- 328: piakl AAkiavG ltlde CARB_BACSU : 322- 328: piakl AAkiavG lslde CARB_ECOLI : 322- 328: piakv AAklavG ytlde CARB_ECOLI : 864- 870: plakv AArvmaG kslae CARB_METBA : 182- 188: plaki AAkvivG hslks CARB_TRICU : 226- 231: qdald AAkti-G ypiil CARB_TRICU : 386- 392: playt AAkialG htlre CARB_TRICU : 1098- 1103: yaarr AAvdf-G iplin CARB_YEAST : 341- 347: playt AAkiglG ytlpe CARY_BACSU : 322- 328: piakm AAklavG ytlde CARY_BACSU : 391- 397: ernle AAiqkaG aslel COAC_CHICK : 300- 305: ddglr AAeev-G ypvmi COAC_CHICK : 1384- 1390: hlylg AAkvevG tevtd COAC_RAT : 299- 304: ddglk AAeev-G ypvmi COAC_RAT : 806- 811: vkrpg AAldp-G cviak COAC_RAT : 1406- 1412: hlylg AAkvevG tevtd COAC_YEAST : 278- 284: alyhq AAneipG spifi COAC_YEAST : 348- 353: hemek AAvrl-G klvgy COAC_YEAST : 1646- 1652: vawnd AAnpdkG fqyly CPSM_HUMAN : 576- 581: edalk AAdti-G ypvmi CPSM_HUMAN : 738- 744: plafi AAkialG iplpg CPSM_RAT : 576- 581: edalk AAdti-G ypvmi CPSM_RAT : 738- 744: plafi AAkialG iplpe DUR1_YEAST : 888- 893: lalrk AAesl-G sllny DUR1_YEAST : 1634- 1639: ymciy AAnsp-G gyqlv DUR1_YEAST : 1634- 1640: ymciy AAnspgG yqlvg HFA1_YEAST : 300- 305: qrmer AAirl-G elvgy PCCA_HUMAN : 224- 229: lssqe AAssf-G ddrll PCCA_RAT : 225- 230: fssqe AAssf-G ddrll PYC1_YEAST : 179- 184: pviik AAfgg-G grgmr PYC1_YEAST : 179- 185: pviik AAfgggG rgmrv PYC1_YEAST : 744- 750: tmkpa AAklliG slrak PYC2_YEAST : 180- 185: pviik AAfgg-G grgmr PYC2_YEAST : 180- 186: pviik AAfgggG rgmrv PYC2_YEAST : 745- 751: tmkpa AAklliG slrtr PYR1_DICDI : 528- 533: pvivr AAycl-G glgsg PYR1_DICDI : 528- 534: pvivr AAyclgG lgsgf PYR1_DICDI : 1566- 1572: dgrnl AAilllG wmydk PYR1_DICDI : 1941- 1947: qcsft AAmqrlG gsvvt PYR1_DROME : 558- 563: aqald AAsrl-G ypvma PYR1_DROME : 570- 575: pvmar AAfsl-G glgsg PYR1_DROME : 570- 576: pvmar AAfslgG lgsgf PYR1_DROME : 720- 726: playv AAkvglG lplpd PYR1_DROME : 834- 840: rpfvi AAalqlG mslre PYR1_DROME : 835- 840: pfvia AAlql-G mslre PYR1_DROME : 1981- 1987: pcsfa AAmlrlG grvis PYR1_MESAU : 19- 25: grpfg AAvstaG evvfq PYR1_MESAU : 543- 549: leqaq AAaerlG ypvlv PYR1_MESAU : 544- 549: eqaqa AAerl-G ypvlv PYR1_MESAU : 556- 561: pvlvr AAfal-G glgsg PYR1_MESAU : 556- 562: pvlvr AAfalgG lgsgf PYR1_MESAU : 706- 712: playv AAklalG iplpe PYR1_MESAU : 814- 820: rifvv AAalwaG ysver PYR1_MESAU : 815- 820: ifvva AAlwa-G ysver PYR1_MESAU : 1490- 1495: fasgt AAala-G gvtmv PYR1_MESAU : 1490- 1496: fasgt AAalagG vtmvc PYR1_MESAU : 1491- 1496: asgta AAlag-G vtmvc PYR1_MESAU : 1982- 1988: sssfa AAmarlG gavls PYR1_SCHPO : 635- 640: pvivr AAyal-G glgsg PYR1_SCHPO : 635- 641: pvivr AAyalgG lgsgf PYR1_SCHPO : 1266- 1271: erivd AAaki-G ealni PYR1_SCHPO : 1995- 2001: sssfd AAmqrlG gkvva PYR1_YEAST : 586- 592: vdeal AAvkeiG fpviv PYR1_YEAST : 599- 604: pvivr AAyal-G glgsg PYR1_YEAST : 599- 605: pvivr AAyalgG lgsgf PYR1_YEAST : 1749- 1754: lplll AAvee-G kltid PYR1_YEAST : 1936- 1942: aqelr AAvareG vldlm PYR1_YEAST : 1969- 1975: cssfi AAmerlG grivn I 9: 12.0102 87( 29) A-x(3)-A-x(3,4)-G Occurences: 87(29) ACCA_MYCLE : 131- 140: arhia AraqAplvpG tpdpv ACCA_MYCLE : 163- 171: hgvpi AikaAfgg-G gkgmk ACCA_MYCLE : 163- 172: hgvpi AikaAfgggG kgmkv ACCA_MYCLE : 191- 200: elyes AvreAtvafG rgecf ACCA_MYCLE : 218- 226: prhve AqviAdqh-G nivva ACCA_MYCTU : 143- 152: gltdd AlvtAaaevG ypvli ACCA_MYCTU : 184- 193: ealvs ArreAmssfG ddtlf ACCC_ANASP : 185- 194: klfla AqgeAgaafG nagvy ACCC_ECOLI : 65- 74: ylnip AiisAaeitG avaih ACCC_HAEIN : 65- 74: ylnip AiiaAaevtG adaih ACCC_PSEAE : 65- 74: ylqip AiiaAaevtG ataih ACCC_PSEAE : 145- 153: edeet AlaiArev-G ypvii CARB_BACCL : 319- 328: tgypi AklaAkiavG ltlde CARB_BACCL : 693- 701: vsvee AvaiAeei-G ypvlv CARB_BACSU : 319- 328: tgypi AklaAkiavG lslde CARB_BACSU : 693- 701: tsvnq AvsiAsdi-G ypvlv CARB_BACSU : 920- 929: stlek AlykAliasG iqipn CARB_BACSU : 977- 985: gylke AsipAkvv-G kigqd CARB_ECOLI : 154- 162: htmee AlavAadv-G fpcii CARB_ECOLI : 319- 328: tgfpi AkvaAklavG ytlde CARB_ECOLI : 700- 708: taiem AvekAkei-G yplvv CARB_ECOLI : 861- 870: tgvpl AkvaArvmaG kslae CARB_ECOLI : 924- 933: vgrtf AeafAkaqlG snstm CARB_METBA : 18- 26: tsqke AievAkri-G fpvlv CARB_METBA : 179- 188: vgipl AkiaAkvivG hslks CARB_TRICU : 223- 231: stiqd AldaAkti-G ypiil CARB_TRICU : 383- 392: tgypl AytaAkialG htlre CARB_TRICU : 756- 764: sslas AkefAnrv-G ypvli CARB_TRICU : 1094- 1103: ldedy AarrAavdfG iplin CARB_TRICU : 1095- 1103: dedya ArraAvdf-G iplin CARB_YEAST : 338- 347: tgypl AytaAkiglG ytlpe CARY_BACSU : 155- 163: dnead AlhfAesi-G fpvii CARY_BACSU : 319- 328: tgypi AkmaAklavG ytlde CARY_BACSU : 697- 705: ytkee AaskAsei-G ypvli COAC_CHICK : 408- 416: hmeqc AvklAkmv-G yvsag COAC_CHICK : 1679- 1687: vlflr AselArth-G ipriy COAC_RAT : 407- 415: hmeqc AvklAkmv-G yvsag COAC_RAT : 1701- 1709: llflr AselArae-G ipriy COAC_YEAST : 141- 149: diaer AdvdAvwa-G wghas CPSM_HUMAN : 573- 581: esied AlkaAdti-G ypvmi CPSM_HUMAN : 735- 744: tgypl AfiaAkialG iplpg CPSM_HUMAN : 1345- 1354: egiht AflkAmlstG fkipq CPSM_RAT : 330- 338: itnrq AfitAqnh-G yaldn CPSM_RAT : 573- 581: esmed AlkaAdti-G ypvmi CPSM_RAT : 735- 744: tgypl AfiaAkialG iplpe CPSM_RAT : 1115- 1123: ntlne AlefAnsv-G ypcll CPSM_RAT : 1345- 1354: egiht AflkAmlstG fkipq DUR1_YEAST : 496- 504: tsikl AvvgAhlk-G lplhw DUR1_YEAST : 750- 758: glkhs ArqiAqka-G vplvp DUR1_YEAST : 884- 893: ektrl AlrkAaeslG sllny HFA1_YEAST : 190- 198: ssped AlekAkli-G fpvmi PCCA_HUMAN : 180- 188: kdaee AvriArei-G ypvmi PCCA_RAT : 102- 111: ylnmd AimeAikktG aqavh PCCA_RAT : 181- 189: kdade AvriArei-G ypvmi PYC1_YEAST : 204- 213: dafqr AtseArtafG ngtcf PYC1_YEAST : 279- 287: ailtd AvklAkec-G yrnag PYC1_YEAST : 585- 594: dlati ApttAhalaG afale PYC1_YEAST : 593- 602: tahal AgafAlecwG gatfd PYC1_YEAST : 774- 783: agtrv AsmtAcalaG advvd PYC1_YEAST : 883- 892: aqtkr AyreAnyllG divkv PYC2_YEAST : 205- 214: dafqr AtseArtafG ngtcf PYC2_YEAST : 280- 288: ailtd AvklAkvc-G yrnag PYC2_YEAST : 586- 595: dlati ApttAhalaG afale PYC2_YEAST : 594- 603: tahal AgafAlecwG gatfd PYC2_YEAST : 775- 784: agtav AsmtAcalaG advvd PYC2_YEAST : 884- 893: aetkr AyreAnyllG divkv PYR1_DICDI : 225- 234: irkvl AlpvAkavfG vcmgn PYR1_DICDI : 675- 684: tgypl AfisAkvalG ydlaa PYR1_DICDI : 1491- 1500: lcksl AaskArcdyG ifiga PYR1_DICDI : 1513- 1522: tnttt AgkfAsdamG mkmyl PYR1_DROME : 395- 404: draat AsdyAchrfG ssdaa PYR1_DROME : 531- 540: dggsq AlcrAgneiG eqvap PYR1_DROME : 555- 563: ysvaq AldaAsrl-G ypvma PYR1_DROME : 717- 726: pgypl AyvaAkvglG lplpd PYR1_DROME : 1288- 1297: pvqfl AapgAectaG rrawt PYR1_DROME : 1296- 1305: gaect AgrrAwtstG evacf PYR1_DROME : 1317- 1326: dnrye AylkAmmstG fqipk PYR1_MESAU : 541- 549: nsleq AqaaAerl-G ypvlv PYR1_MESAU : 703- 712: tgypl AyvaAklalG iplpe PYR1_MESAU : 1097- 1105: vlsga AmnvAytd-G dlerf PYR1_MESAU : 1298- 1307: esrce AylkAmlstG fkipk PYR1_MESAU : 1486- 1495: hkedf AsgtAaalaG gvtmv PYR1_MESAU : 1981- 1989: tsssf AaamArlg-G avlsf PYR1_SCHPO : 893- 901: dqrlf AianAmas-G ysvdr PYR1_SCHPO : 1380- 1389: hnkfe AylkAmistG frlpk PYR1_SCHPO : 1892- 1900: glpha ApslAeaf-G qapen PYR1_YEAST : 857- 866: dmrvf AianAfakkG ysvdk PYR1_YEAST : 1121- 1129: tsmde AesfAekv-G ypvlv J 10: 12.0102 73( 29) A-x(3)-G-x(2,3)-V Occurences: 73(29) ACCA_MYCLE : 198- 206: reatv AfgrGecfV eryld ACCA_MYCLE : 222- 229: eaqvi AdqhGni-V vagtr ACCA_MYCLE : 222- 230: eaqvi AdqhGnivV agtrd ACCA_MYCLE : 273- 281: ricke AhyyGagtV eylvg ACCA_MYCLE : 525- 532: gghtg AatsGda-V tapmq ACCA_MYCLE : 534- 541: gdavt ApmqGtv-V kvava ACCA_MYCLE : 544- 551: tvvkv AvaeGqt-V mtgdl ACCA_MYCTU : 148- 155: alvta AaevGyp-V likps ACCA_MYCTU : 215- 222: evqvl AdahGnv-V hlger ACCA_MYCTU : 627- 635: ehsle ApvsGrvqV lvsvg ACCC_ANASP : 149- 156: eglel AkdiGyp-V mikat ACCC_ECOLI : 149- 156: knrai AkriGyp-V iikas ACCC_HAEIN : 216- 223: eiqvl AdthGna-V ylaer ACCC_PSEAE : 149- 156: talai ArevGyp-V iikaa CARB_BACCL : 438- 445: fyiae AlrrGvt-V etlhe CARB_BACCL : 697- 704: eavai AeeiGyp-V lvrps CARB_BACCL : 757- 764: evevd AiadGet-V vipgi CARB_BACCL : 757- 765: evevd AiadGetvV ipgim CARB_BACSU : 438- 445: fylae AyrrGyt-V edlhe CARB_BACSU : 697- 704: qavsi AsdiGyp-V lvrps CARB_BACSU : 757- 764: eievd AvsdGet-V vipgi CARB_BACSU : 757- 765: eievd AvsdGetvV ipgim CARB_BACSU : 806- 814: eqyti AlakGlniV gllni CARB_ECOLI : 441- 448: wyiad AfraGls-V dgvfn CARB_ECOLI : 704- 712: mavek AkeiGyplV vrpsy CARB_ECOLI : 765- 772: evdvd AicdGem-V liggi CARB_METBA : 22- 29: eaiev AkriGfp-V lvrps CARB_METBA : 148- 156: iniqm AekgGkvyV leanp CARB_TRICU : 760- 767: sakef AnrvGyp-V lirps CARB_YEAST : 888- 895: eiavk AflgGdi-V pkpvd CARY_BACSU : 159- 166: dalhf AesiGfp-V iirpa CARY_BACSU : 701- 708: eaask AseiGyp-V lirps CARY_BACSU : 984- 991: kerle AmthGip-V fteee COAC_CHICK : 301- 308: dglra AeevGyp-V mikas COAC_CHICK : 1567- 1575: skrfq AqslGtsyV ydipe COAC_CHICK : 1801- 1809: lvtcr AigiGaylV rlgqr COAC_CHICK : 1953- 1960: vvvgr ArlgGip-V gvvav COAC_RAT : 300- 307: dglka AeevGyp-V mikas COAC_RAT : 1823- 1831: lvtcr AigiGaylV rlgqr COAC_RAT : 1975- 1982: vvvgr ArlgGip-V gvvav COAC_RAT : 2085- 2093: yippq AelrGgswV vidpt COAC_YEAST : 242- 249: dglqk AkriGfp-V mikas COAC_YEAST : 349- 356: emeka AvrlGkl-V gyvsa COAC_YEAST : 1112- 1120: rrayr AytiGdirV hegvt COAC_YEAST : 1500- 1508: pkryk AhlmGttyV ydfpe CPSM_HUMAN : 577- 584: dalka AdtiGyp-V mirsa CPSM_RAT : 577- 584: dalka AdtiGyp-V mirsa DUR1_YEAST : 754- 762: sarqi AqkaGvplV pgsll HFA1_YEAST : 194- 201: dalek AkliGfp-V mikas HFA1_YEAST : 301- 308: rmera AirlGel-V gyvsa PCCA_HUMAN : 184- 191: eavri AreiGyp-V mikas PCCA_RAT : 185- 192: eavri AreiGyp-V mikas PYC1_YEAST : 211- 219: seart AfgnGtcfV erfld PYC1_YEAST : 235- 242: evqll AdnhGnv-V hlfer PYC1_YEAST : 530- 538: nvtks AppsGwrqV llekg PYC1_YEAST : 1105- 1112: plhig ApmaGvi-V evkvh PYC2_YEAST : 212- 220: seart AfgnGtcfV erfld PYC2_YEAST : 236- 243: evqll AdnhGnv-V hlfer PYC2_YEAST : 531- 539: nvtks AppsGwrqV llekg PYR1_DICDI : 517- 524: eslie AekiGyp-V ivraa PYR1_DICDI : 1460- 1468: sgtat AlagGftmV gampn PYR1_DICDI : 2178- 2185: rmsll AlvfGag-V PYR1_DROME : 559- 566: qalda AsrlGyp-V maraa PYR1_DROME : 1644- 1651: qlirs AkekGvk-V nlrvc PYR1_MESAU : 362- 370: vreav AgnpGgqtV kerlv PYR1_MESAU : 545- 552: qaqaa AerlGyp-V lvraa PYR1_MESAU : 816- 823: fvvaa AlwaGys-V erlye PYR1_MESAU : 1492- 1500: sgtaa AlagGvtmV campn PYR1_MESAU : 1627- 1634: llikt AkaqGlp-V tceva PYR1_MESAU : 1793- 1801: lrgev AyidGqvlV ppgyg PYR1_SCHPO : 897- 904: faian AmasGys-V driwe PYR1_SCHPO : 947- 955: sllkt AkqlGfadV qiaaf PYR1_SCHPO : 2234- 2242: rmall AcvmGateV an PYR1_YEAST : 1125- 1132: eaesf AekvGyp-V lvrps PYR1_YEAST : 1716- 1724: ldsid AfsvGalpV alanv PYR1_YEAST : 1727- 1734: lpval AnvtGnk-V dvgmg K 11: 12.0102 68( 29) A-x(3)-G-x(3,4)-L Occurences: 68(29) ACCA_MYCLE : 84- 92: ksgan AihpGygf-L aenad ACCA_MYCLE : 571- 580: enpvt AhkdGiitgL aveag ACCA_MYCTU : 77- 85: rtgaq AihpGygf-L aenad ACCA_MYCTU : 148- 156: alvta AaevGypv-L ikpsa ACCA_MYCTU : 161- 170: likps AgggGkgmrL vqdpa ACCA_MYCTU : 215- 224: evqvl AdahGnvvhL gerec ACCA_MYCTU : 561- 569: rhlwi AderGtwh-L reaee ACCA_MYCTU : 627- 636: ehsle ApvsGrvqvL vsvgd ACCC_ANASP : 78- 86: trnas AihpGygf-L senak ACCC_ANASP : 162- 171: mikat AgggGrgmrL vrspd ACCC_ANASP : 216- 225: efqil AdnyGnvihL gerdc ACCC_ECOLI : 77- 85: itgav AihpGygf-L senan ACCC_ECOLI : 216- 225: eiqvl AdgqGnaiyL aerdc ACCC_ECOLI : 243- 252: kvvee ApapGitpeL rryig ACCC_HAEIN : 77- 85: vtgad AihpGygf-L senad ACCC_HAEIN : 216- 225: eiqvl AdthGnavyL aerdc ACCC_PSEAE : 77- 85: vtgat AihpGygf-L aenad CARB_BACCL : 697- 705: eavai AeeiGypv-L vrpsy CARB_BACCL : 1027- 1035: rirre AvenGipc-L tsldt CARB_BACSU : 697- 705: qavsi AsdiGypv-L vrpsy CARB_ECOLI : 765- 773: evdvd AicdGemv-L iggim CARB_METBA : 22- 30: eaiev AkriGfpv-L vrpsy CARB_METBA : 148- 157: iniqm AekgGkvyvL eanpr CARB_TRICU : 227- 236: dalda AktiGypiiL rsafs CARB_TRICU : 549- 557: elvmt AkktGfsd-L qiaql CARB_TRICU : 760- 768: sakef AnrvGypv-L irpsy CARB_YEAST : 341- 350: playt AakiGlgytL pelpn CARY_BACSU : 88- 96: pdgll AnlgGqta-L nlave CARY_BACSU : 701- 709: eaask AseiGypv-L irpsy COAC_CHICK : 250- 258: assiv AqtaGipt-L pwngs COAC_CHICK : 364- 373: evqil AdqyGnaisL fgrdc COAC_CHICK : 1694- 1703: priyv AansGarigL aeeir COAC_CHICK : 2125- 2133: vymrl AerlGtpe-L saadr COAC_RAT : 249- 257: assiv AqtaGipt-L pwsgs COAC_RAT : 363- 372: evqil AdqyGnaisL fgrdc COAC_RAT : 1716- 1725: priyv AansGarigL aeeir COAC_RAT : 2147- 2155: vyirl AerlGtpe-L spter COAC_YEAST : 305- 314: evqll AdqyGtnisL fgrdc CPSM_HUMAN : 262- 270: dgili AggpGnpa-L aepli CPSM_HUMAN : 1456- 1464: virrt AvdsGipl-L tnfqv CPSM_RAT : 262- 270: dglli AggpGnpa-L aqpli CPSM_RAT : 1119- 1127: ealef AnsvGypc-L lrpsy CPSM_RAT : 1119- 1128: ealef AnsvGypclL rpsyv CPSM_RAT : 1456- 1464: virrt AvdsGial-L tnfqv DUR1_YEAST : 123- 131: lrnag AiivGktn-L dqfat DUR1_YEAST : 708- 716: qtnaq AiipGygf-L senad DUR1_YEAST : 1635- 1643: mciya AnspGgyq-L vgrti HFA1_YEAST : 257- 266: evqll AdqyGtnitL fgrdc HFA1_YEAST : 687- 695: qmplv AksdGvie-L lrqpg HFA1_YEAST : 687- 696: qmplv AksdGvielL rqpgs PCCA_HUMAN : 113- 121: ktraq AvhpGygf-L senke PCCA_HUMAN : 225- 233: ssqea AssfGddr-L liekf PCCA_HUMAN : 225- 234: ssqea AssfGddrlL iekfi PCCA_RAT : 114- 122: ktgaq AvhpGygf-L senke PCCA_RAT : 226- 234: ssqea AssfGddr-L liekf PCCA_RAT : 226- 235: ssqea AssfGddrlL iekfi PCCA_RAT : 677- 685: qnsmt AgkmGkvk-L vhcka PYC1_YEAST : 235- 244: evqll AdnhGnvvhL ferdc PYC1_YEAST : 530- 539: nvtks AppsGwrqvL lekgp PYC2_YEAST : 236- 245: evqll AdnhGnvvhL ferdc PYC2_YEAST : 531- 540: nvtks AppsGwrqvL lekgp PYR1_DICDI : 852- 860: sdkqi AravGtte-L nvrdy PYR1_DROME : 720- 729: playv AakvGlglpL pdikn PYR1_DROME : 1644- 1653: qlirs AkekGvkvnL rvcph PYR1_MESAU : 227- 236: gpgdp AsypGvvatL nrvls PYR1_MESAU : 545- 553: qaqaa AerlGypv-L vraaf PYR1_MESAU : 1717- 1725: plllt AvseGrls-L ddllq PYR1_SCHPO : 785- 794: plaft AaklGlnipL nevkn PYR1_SCHPO : 1779- 1787: plllt AvneGrlt-L kdvvd PYR1_YEAST : 309- 317: ghqli AraaGast-L klkfg PYR1_YEAST : 749- 758: playt AaklGlnipL nevkn PYR1_YEAST : 1125- 1133: eaesf AekvGypv-L vrpsy L 12: 12.0102 46( 29) L-x(1,2)-N-x(3)-A Occurences: 46(29) ACCA_MYCLE : 92- 99: pgygf LaeNadfA qavid ACCA_MYCTU : 85- 92: pgygf LaeNadfA aacer ACCC_ANASP : 86- 93: pgygf LseNakfA eicad ACCC_ECOLI : 85- 92: pgygf LseNanfA eqver ACCC_HAEIN : 85- 92: pgygf LseNadfA eqver ACCC_PSEAE : 85- 92: pgygf LaeNadfA eqier CARB_BACCL : 46- 52: gykvi Lv-NsnpA timtd CARB_BACSU : 46- 52: gyevi Lv-NsnpA timtd CARB_ECOLI : 45- 51: gyrvi Lv-NsnpA timtd CARB_ECOLI : 824- 830: lqvrg Lm-NvqfA vknne CARB_METBA : 142- 148: lrvkg Li-NiqmA ekggk CARB_TRICU : 114- 120: nieti Li-NpniA tiqts CARB_TRICU : 789- 796: wdeaq LehNltlA tnvsp CARB_TRICU : 1106- 1113: dfgip LinNpklA vlfte CARB_YEAST : 67- 73: nkfti Lv-NpniA tnqts CARY_BACSU : 46- 52: gyrvi Lv-NsnpA timtd COAC_CHICK : 122- 129: viekv LiaNngiA avkcm COAC_RAT : 121- 128: viekv LiaNngiA avkcm COAC_YEAST : 63- 70: viski LiaNngiA avkei COAC_YEAST : 2062- 2068: elrsq Ls-NkslA pevhq CPSM_HUMAN : 341- 347: nhcya Ld-NtlpA gwkpl CPSM_HUMAN : 461- 467: nvktv Lm-NpniA svqtn CPSM_HUMAN : 1398- 1405: atsdw LnaNnvpA npvaw CPSM_RAT : 341- 347: nhgya Ld-NtlpA gwkpl CPSM_RAT : 461- 467: nvktv Lm-NpniA svqtn CPSM_RAT : 1398- 1405: atsdw LnaNnvpA tpvaw DUR1_YEAST : 895- 901: eslgs Ll-NykcA gtvef HFA1_YEAST : 15- 22: viski LiaNngiA avkem PCCA_HUMAN : 121- 128: pgygf LseNkefA rclaa PCCA_RAT : 122- 129: pgygf LseNkefA kclaa PYC1_YEAST : 105- 112: pgygf LseNsefA dkvvk PYC2_YEAST : 106- 113: pgygf LseNsefA dkvvk PYR1_DICDI : 404- 410: gikti Li-NpniA tvqts PYR1_DICDI : 1395- 1402: dfqvp LitNikcA klfvd PYR1_DROME : 447- 453: niqtv Li-NpniA tvqts PYR1_DROME : 1087- 1093: tlgke Lt-NlqsA iefce PYR1_MESAU : 431- 438: eniqt LliNpniA tvqts PYR1_MESAU : 432- 438: niqtl Li-NpniA tvqts PYR1_MESAU : 1019- 1026: smggq LpnNmamA lhrqq PYR1_SCHPO : 513- 519: giyti Li-NpniA tiqts PYR1_SCHPO : 1503- 1510: dysvp LvtNvkcA klmie PYR1_YEAST : 287- 293: dlsqr Ls-NvleA kktpv PYR1_YEAST : 477- 483: giyti Li-NpniA tiqts PYR1_YEAST : 1437- 1444: nneid LyiNlpsA nrfrr PYR1_YEAST : 1471- 1478: dysvp LvtNvkcA kllie PYR1_YEAST : 1609- 1615: lplre Lk-NkitA vaell M 13: 12.0102 75( 29) G-x(3)-E-x(4,5)-A Occurences: 75(29) ACCA_MYCLE : 90- 99: ihpgy GflaEnadf-A qavid ACCA_MYCLE : 485- 494: ivevd GrrlEvslp-A dlala ACCA_MYCTU : 83- 92: ihpgy GflaEnadf-A aacer ACCA_MYCTU : 83- 93: ihpgy GflaEnadfaA acera ACCA_MYCTU : 334- 343: dielr GhaiEarvy-A edpar ACCC_ANASP : 84- 93: ihpgy GflsEnakf-A eicad ACCC_ANASP : 333- 342: qvvlr GhaiEcrin-A edpdh ACCC_ECOLI : 83- 92: ihpgy GflsEnanf-A eqver ACCC_ECOLI : 332- 341: evhvr GhavEcrin-A edpnt ACCC_ECOLI : 364- 373: apggf GvrwEshiy-A gytvp ACCC_HAEIN : 83- 92: ihpgy GflsEnadf-A eqver ACCC_HAEIN : 332- 341: dikvk GhamEcrin-A edpkt ACCC_PSEAE : 83- 92: ihpgy GflaEnadf-A eqier ACCC_PSEAE : 136- 145: vpgsd GplpEdeet-A laiar ACCC_PSEAE : 332- 341: dvvir GhalEcrin-A edpkt CARB_BACCL : 117- 126: gveil GtklEaiek-A edreq CARB_BACCL : 386- 396: evmai GrtfEesllkA vrsle CARB_BACCL : 655- 664: gvrll GttlEdldr-A edrdk CARB_BACCL : 750- 759: dryit GkevEvdai-A dgetv CARB_BACSU : 386- 396: evmai GrtlEesllkA vrsle CARB_BACSU : 655- 664: gvkil GtslEdldr-A edrdk CARB_BACSU : 972- 981: tegta GylkEasip-A kvvgk CARB_ECOLI : 20- 30: gpivi GqacEfdysgA qacka CARB_ECOLI : 721- 731: syvlg GramEivydeA dlrry CARB_ECOLI : 775- 784: emvli GgimEhieq-A gvhsg CARB_METBA : 93- 102: kdvii GaimEhiee-A gvhsg CARB_TRICU : 340- 350: ivrhv GvvgEcnvqyA ldpns CARB_TRICU : 450- 460: evmai GrtfEeslqkA irqvd CARB_TRICU : 628- 637: gvyri GssvEfdwc-A vtcsr CARB_TRICU : 718- 727: gvqvl GtdpEmids-A edrhk CARB_YEAST : 295- 305: iirhl GvigEcnvqyA lqpdg CARB_YEAST : 405- 415: evmai GrnyEeafqkA lrqvd CARB_YEAST : 592- 601: gvyri GssvEfdwc-A vntak CARY_BACSU : 569- 578: gpiri GqgvEfdys-A vhgvl COAC_CHICK : 1935- 1945: gffdn GsflEimqpwA qtvvv COAC_RAT : 1957- 1967: gffdy GsfsEimqpwA qtvvv COAC_YEAST : 901- 911: pdkll GavvEpladiA hkysn COAC_YEAST : 1868- 1878: glfdk GsffEtlsgwA kgvvv CPSM_HUMAN : 78- 88: fntgl GgypEaitdpA ykgqi CPSM_HUMAN : 363- 373: dqtne GimhEskpffA vqfhp CPSM_HUMAN : 692- 702: vvrhl GivgEcniqfA lhpts CPSM_HUMAN : 802- 812: evmai GrtfEesfqkA lrmch CPSM_HUMAN : 987- 996: gpyhi GssvEfdwc-A vssir CPSM_RAT : 78- 88: fntgl GgysEaltdpA ykgqi CPSM_RAT : 363- 373: dqtne GimhEskpffA vqfhp CPSM_RAT : 692- 702: vvrhl GivgEcniqfA lhpts CPSM_RAT : 802- 812: evmai GrtfEesfqkA lrmch CPSM_RAT : 987- 996: gpyhi GssvEfdwc-A vssir DUR1_YEAST : 826- 836: ffgda GvflErfienA rhvev DUR1_YEAST : 963- 972: kvevn GvsmEarly-A enplk DUR1_YEAST : 1725- 1735: tafqe GqlgEraeefA kliqn HFA1_YEAST : 700- 710: llrqp GsiiEagdviA kltld PCCA_HUMAN : 119- 128: vhpgy GflsEnkef-A rclaa PCCA_HUMAN : 150- 159: aiqam GdkiEskll-A kkaev PCCA_HUMAN : 367- 376: ifafn GwavEcrvy-A edpyk PCCA_RAT : 120- 129: vhpgy GflsEnkef-A kclaa PCCA_RAT : 151- 160: aiqam GdkiEskll-A krakv PCCA_RAT : 369- 378: dipis GwavEcrvy-A edpyk PYC1_YEAST : 103- 112: ihpgy GflsEnsef-A dkvvk PYC2_YEAST : 104- 113: ihpgy GflsEnsef-A dkvvk PYR1_DICDI : 742- 752: evmsi GrkfEeaiqkA irmvm PYR1_DICDI : 921- 930: gsyri GssvEfdwc-A vscir PYR1_DROME : 675- 685: virhf GvvgEcniryA svprl PYR1_DROME : 1054- 1063: qqevl GtspEsidc-A enrfk PYR1_MESAU : 660- 670: vtqhl GivgEcnvqyA lnpes PYR1_MESAU : 769- 779: evmgi GrsfEeafqkA lrmvd PYR1_MESAU : 946- 955: gvyri GssvEfdwc-A vgciq PYR1_MESAU : 1036- 1045: qcrvl GtspEaids-A enrfk PYR1_SCHPO : 739- 749: virhl GvvgEcniqyA lnpft PYR1_SCHPO : 849- 859: evmsi GrtfEeaiqkA iraid PYR1_SCHPO : 1027- 1036: gvyri GssvEfdwc-A vravr PYR1_SCHPO : 1117- 1126: nvkil GtspEmidg-A enrfk PYR1_YEAST : 423- 432: piafp GgllEdnvk-A hprie PYR1_YEAST : 703- 713: virhl GvvgEcniqyA lnpvs PYR1_YEAST : 813- 823: evmsi GrtfEeaiqkA irste PYR1_YEAST : 993- 1002: gvyri GssvEfdwc-A vtavr N 14: 12.0102 54( 29) G-x(1,2)-A-x-E Occurences: 54(29) ACCA_MYCLE : 338- 342: dpipc Gh-AiE fring ACCA_MYCLE : 579- 583: dgiit Gl-AvE agtai ACCA_MYCTU : 334- 338: dielr Gh-AiE arvya ACCC_ANASP : 333- 337: qvvlr Gh-AiE crina ACCC_ECOLI : 332- 336: evhvr Gh-AvE crina ACCC_HAEIN : 332- 336: dikvk Gh-AmE crina ACCC_PSEAE : 332- 336: dvvir Gh-AlE crina CARB_BACCL : 21- 25: gpivi Gq-AaE fdyag CARB_BACCL : 713- 718: psyvl GgrAmE ivynr CARB_BACCL : 714- 718: syvlg Gr-AmE ivynr CARB_BACSU : 21- 25: gpiii Gq-AaE fdyag CARB_BACSU : 713- 718: psyvl GgrAmE ivyhe CARB_BACSU : 714- 718: syvlg Gr-AmE ivyhe CARB_ECOLI : 20- 24: gpivi Gq-AcE fdysg CARB_ECOLI : 720- 725: psyvl GgrAmE ivyde CARB_ECOLI : 721- 725: syvlg Gr-AmE ivyde CARB_ECOLI : 1018- 1023: intts GrrAiE dsrvi CARB_METBA : 38- 43: psyvl GgrAmE ivyde CARB_METBA : 39- 43: syvlg Gr-AmE ivyde CARB_TRICU : 89- 93: gglsi Gq-AgE fdysg CARB_YEAST : 42- 46: gglsi Gq-AgE fdysg CARY_BACSU : 21- 25: gpiii Gq-AaE fdysg COAC_CHICK : 210- 214: vwagw Gh-AsE npklp COAC_CHICK : 297- 302: kdadd GlrAaE evgyp COAC_CHICK : 1702- 1706: sgari Gl-AeE irhmf COAC_CHICK : 1778- 1783: nlrgs GmiAgE sslay COAC_CHICK : 1961- 1966: ggipv GvvAvE trtve COAC_RAT : 209- 213: vwagw Gh-AsE npklp COAC_RAT : 296- 301: kdvdd GlkAaE evgyp COAC_RAT : 1724- 1728: sgari Gl-AeE irhmf COAC_RAT : 1800- 1805: nlrgs GmiAgE sslay COAC_RAT : 1983- 1988: ggipv GvvAvE trtve COAC_YEAST : 151- 155: vwagw Gh-AsE npllp COAC_YEAST : 917- 922: hkysn GleAhE hsifv COAC_YEAST : 1630- 1634: sgari Gm-AeE ivplf CPSM_HUMAN : 436- 440: gglsi Gq-AgE fdysg CPSM_RAT : 436- 440: gglsi Gq-AgE fdysg DUR1_YEAST : 1728- 1733: qegql GerAeE fakli HFA1_YEAST : 103- 107: vwagw Gh-AsE npclp PCCA_HUMAN : 367- 371: ifafn Gw-AvE crvya PCCA_RAT : 369- 373: dipis Gw-AvE crvya PYC1_YEAST : 594- 599: ahala GafAlE cwgga PYC2_YEAST : 595- 600: ahala GafAlE cwgga PYR1_DICDI : 214- 218: dpslc Gk-AiE nirkv PYR1_DICDI : 379- 383: gglsi Gq-AgE fdysg PYR1_DICDI : 1284- 1289: glist GfkApE knvll PYR1_DICDI : 1901- 1905: lhalf Gi-AhE mrilv PYR1_DROME : 422- 426: rglsi Gq-AgE fdysg PYR1_MESAU : 407- 411: gglsi Gq-AgE fdysg PYR1_MESAU : 725- 730: nsvtg GtaAfE psldy PYR1_MESAU : 1862- 1867: rasdp GlpAeE pkekp PYR1_SCHPO : 488- 492: gglsi Gq-AgE fdysg PYR1_SCHPO : 1900- 1904: laeaf Gq-ApE nkahp PYR1_YEAST : 452- 456: gglsi Gq-AgE fdysg O 15: 12.0102 66( 29) A-x(3,4)-G-x(3)-L Occurences: 66(29) ACCA_MYCLE : 84- 92: ksgan Aihp-GygfL aenad ACCA_MYCTU : 77- 85: rtgaq Aihp-GygfL aenad ACCA_MYCTU : 147- 156: dalvt AaaevGypvL ikpsa ACCA_MYCTU : 148- 156: alvta Aaev-GypvL ikpsa ACCA_MYCTU : 188- 197: sarre AmssfGddtL flerf ACCA_MYCTU : 561- 569: rhlwi Ader-GtwhL reaee ACCC_ANASP : 78- 86: trnas Aihp-GygfL senak ACCC_ECOLI : 77- 85: itgav Aihp-GygfL senan ACCC_HAEIN : 77- 85: vtgad Aihp-GygfL senad ACCC_PSEAE : 77- 85: vtgat Aihp-GygfL aenad CARB_BACCL : 697- 705: eavai Aeei-GypvL vrpsy CARB_BACCL : 1027- 1035: rirre Aven-GipcL tsldt CARB_BACSU : 697- 705: qavsi Asdi-GypvL vrpsy CARB_ECOLI : 765- 773: evdvd Aicd-GemvL iggim CARB_METBA : 22- 30: eaiev Akri-GfpvL vrpsy CARB_TRICU : 549- 557: elvmt Akkt-GfsdL qiaql CARB_TRICU : 760- 768: sakef Anrv-GypvL irpsy CARB_TRICU : 840- 849: ehven AgvhsGdatL vlppf CARB_YEAST : 804- 813: ehven AgvhsGdasL vlppq CARY_BACSU : 88- 96: pdgll Anlg-GqtaL nlave CARY_BACSU : 649- 658: inaae AlekaGitlL gtsfq CARY_BACSU : 701- 709: eaask Asei-GypvL irpsy COAC_CHICK : 250- 258: assiv Aqta-GiptL pwngs COAC_CHICK : 2125- 2133: vymrl Aerl-GtpeL saadr COAC_RAT : 249- 257: assiv Aqta-GiptL pwsgs COAC_RAT : 2147- 2155: vyirl Aerl-GtpeL spter COAC_YEAST : 1647- 1656: awnda AnpdkGfqyL yltse CPSM_HUMAN : 262- 270: dgili Aggp-GnpaL aepli CPSM_HUMAN : 1456- 1464: virrt Avds-GiplL tnfqv CPSM_RAT : 262- 270: dglli Aggp-GnpaL aqpli CPSM_RAT : 1119- 1127: ealef Ansv-GypcL lrpsy CPSM_RAT : 1199- 1208: ehved AgvhsGdatL mlptq CPSM_RAT : 1456- 1464: virrt Avds-GialL tnfqv DUR1_YEAST : 123- 131: lrnag Aiiv-GktnL dqfat DUR1_YEAST : 708- 716: qtnaq Aiip-GygfL senad DUR1_YEAST : 1634- 1643: ymciy AanspGgyqL vgrti DUR1_YEAST : 1635- 1643: mciya Ansp-GgyqL vgrti HFA1_YEAST : 687- 695: qmplv Aksd-GvieL lrqpg PCCA_HUMAN : 113- 121: ktraq Avhp-GygfL senke PCCA_HUMAN : 224- 233: lssqe AassfGddrL liekf PCCA_HUMAN : 225- 233: ssqea Assf-GddrL liekf PCCA_HUMAN : 688- 697: svhcq AgdtvGegdL lvele PCCA_RAT : 114- 122: ktgaq Avhp-GygfL senke PCCA_RAT : 225- 234: fssqe AassfGddrL liekf PCCA_RAT : 226- 234: ssqea Assf-GddrL liekf PCCA_RAT : 677- 685: qnsmt Agkm-GkvkL vhcka PCCA_RAT : 690- 699: lvhck AgdtvGegdL lvele PYC1_YEAST : 589- 598: iaptt AhalaGafaL ecwgg PYC2_YEAST : 590- 599: iaptt AhalaGafaL ecwgg PYR1_DICDI : 852- 860: sdkqi Arav-GtteL nvrdy PYR1_DICDI : 1117- 1126: eieid AvadnGrivL faise PYR1_DICDI : 1667- 1676: eekcs AkpppGfpgL etslp PYR1_DROME : 1177- 1186: ehven AgvhsGdatL vtppq PYR1_DROME : 1917- 1926: nsnpv AhslmGkhiL avdmf PYR1_MESAU : 544- 553: eqaqa AaerlGypvL vraaf PYR1_MESAU : 545- 553: qaqaa Aerl-GypvL vraaf PYR1_MESAU : 1158- 1167: ehven AgvhsGdatL vtppq PYR1_MESAU : 1717- 1725: plllt Avse-GrlsL ddllq PYR1_MESAU : 1983- 1992: ssfaa AmarlGgavL sfsea PYR1_SCHPO : 1239- 1248: ehven AgvhsGdatL vlppq PYR1_SCHPO : 1779- 1787: plllt Avne-GrltL kdvvd PYR1_YEAST : 154- 163: khlrd AgsmlGrlsL eksgs PYR1_YEAST : 309- 317: ghqli Araa-GastL klkfg PYR1_YEAST : 1125- 1133: eaesf Aekv-GypvL vrpsy PYR1_YEAST : 1205- 1214: ehven AgvhsGdatL ivppq PYR1_YEAST : 1937- 1946: qelra AvareGvldL mkghv P 16: 12.0102 61( 29) E-x(4)-A-x(2,3)-G Occurences: 61(29) ACCA_MYCLE : 150- 159: vknad EvvafAkehG vpiai ACCA_MYCLE : 217- 226: kprhv EaqviAdqhG nivva ACCA_MYCLE : 566- 575: eamkm EnpvtAhkdG iitgl ACCA_MYCTU : 210- 219: rprhi EvqvlAdahG nvvhl ACCA_MYCTU : 622- 631: eamkm EhsleApvsG rvqvl ACCC_ANASP : 144- 153: veteq EglelAkdiG ypvmi ACCC_ANASP : 211- 220: rprhi EfqilAdnyG nvihl ACCC_ECOLI : 211- 220: nprhv EiqvlAdgqG naiyl ACCC_HAEIN : 3- 11: ml EkvviAnr-G eialr ACCC_HAEIN : 211- 220: nprhv EiqvlAdthG navyl ACCC_PSEAE : 3- 11: ml EkvliAnr-G eialr CARB_BACCL : 692- 701: avsve EavaiAeeiG ypvlv CARB_BACCL : 752- 761: yitgk EvevdAiadG etvvi CARB_BACSU : 104- 112: avels ErgvlAec-G vevlg CARB_BACSU : 469- 477: givqf EkelkAna-G dtdvl CARB_BACSU : 752- 761: yltgk EievdAvsdG etvvi CARB_BACSU : 801- 810: ikkki EqytiAlakG lnivg CARB_BACSU : 976- 985: agylk EasipAkvvG kigqd CARB_ECOLI : 153- 162: ahtme EalavAadvG fpcii CARB_ECOLI : 392- 400: grtqq EslqkAlr-G levga CARB_ECOLI : 760- 769: lddav EvdvdAicdG emvli CARB_ECOLI : 925- 933: grtfa EafakAql-G snstm CARB_METBA : 17- 26: atsqk EaievAkriG fpvlv CARB_TRICU : 544- 553: eqldk ElvmtAkktG fsdlq CARB_YEAST : 883- 891: gvnfi EiavkAfl-G gdivp CARB_YEAST : 883- 892: gvnfi EiavkAflgG divpk CARY_BACSU : 482- 491: sdlsf EllkkAkekG fsdat CARY_BACSU : 573- 581: igqgv EfdysAvh-G vltlq CARY_BACSU : 696- 705: aytke EaaskAseiG ypvli COAC_CHICK : 119- 127: gnrvi EkvliAnn-G iaavk COAC_CHICK : 359- 368: qsrhl EvqilAdqyG naisl COAC_RAT : 118- 126: gnkvi EkvliAnn-G iaavk COAC_RAT : 358- 367: qsrhl EvqilAdqyG naisl COAC_YEAST : 300- 309: rarhl EvqllAdqyG tnisl COAC_YEAST : 344- 353: aetfh EmekaAvrlG klvgy COAC_YEAST : 1398- 1406: fdisp EdveaAfg-G flerf COAC_YEAST : 1554- 1563: eltev ErepgAnaiG mvafk CPSM_HUMAN : 155- 163: gqwlq EekvpAiy-G vdtrm CPSM_HUMAN : 902- 911: esmte EtlkrAkeiG fsdkq CPSM_RAT : 155- 163: gqwlq EekvpAiy-G vdtrm CPSM_RAT : 902- 911: esvte EtlrqAkeiG fsdkq CPSM_RAT : 1114- 1123: vntln EalefAnsvG ypcll DUR1_YEAST : 1800- 1809: eamka EmiisApksG kiiki HFA1_YEAST : 252- 261: darhl EvqllAdqyG tnitl PCCA_HUMAN : 179- 188: vkdae EavriAreiG ypvmi PCCA_RAT : 180- 189: lkdad EavriAreiG ypvmi PYC1_YEAST : 230- 239: kpkhi EvqllAdnhG nvvhl PYC1_YEAST : 379- 388: dtgri EvyrsAggnG vrldg PYC2_YEAST : 231- 240: kpkhi EvqllAdnhG nvvhl PYC2_YEAST : 380- 389: dtgrl EvyrsAggnG vrldg PYR1_DICDI : 512- 521: cnsle EslieAekiG ypviv PYR1_DICDI : 1114- 1122: eakei EidavAdn-G rivlf PYR1_DROME : 332- 340: pdgws ElfvnAnd-G dqrgh PYR1_DROME : 1076- 1084: rmldq EgylaAtl-G keltn PYR1_DROME : 2079- 2087: mwrle ErtdrAla-G ppadp PYR1_MESAU : 355- 363: fdvfl EtvreAva-G npggq PYR1_SCHPO : 396- 404: sngwk ElfvnAnd-G snegi PYR1_SCHPO : 1217- 1225: nakei EldavAre-G kmvmh PYR1_YEAST : 1120- 1129: ltsmd EaesfAekvG ypvlv PYR1_YEAST : 1183- 1191: nakei EmdavArn-G elvmh PYR1_YEAST : 1283- 1291: gvnli ElatkAim-G lpltp PYR1_YEAST : 2104- 2113: peglr EelrkAgllG vesie Q 17: 11.5102 62( 29) G-E-x(3,5)-I Occurences: 62(29) ACCA_MYCLE : 18- 25: lvanr GEiavrvI raarh ACCA_MYCLE : 325- 331: fkian GEklel-I kdpip ACCA_MYCTU : 11- 18: lvanr GEiavrvI rtlrr ACCC_ANASP : 12- 18: lianr GEialr-I lrace ACCC_ANASP : 226- 232: nvihl GErdcs-I qrrnq ACCC_ECOLI : 11- 17: vianr GEialr-I lrack ACCC_ECOLI : 282- 287: flfen GEfyf--I emntr ACCC_ECOLI : 392- 399: klicy GEnrdvaI armkn ACCC_HAEIN : 11- 17: vianr GEialr-I lrack ACCC_HAEIN : 282- 287: flyen GEfyf--I emntr ACCC_PSEAE : 11- 17: lianr GEialr-I lrack ACCC_PSEAE : 318- 323: lrias GEkls--I rqedv CARB_BACCL : 380- 385: qmkat GEvma--I grtfe CARB_BACCL : 761- 766: daiad GEtvv--I pgime CARB_BACSU : 380- 385: qmkat GEvma--I grtle CARB_BACSU : 761- 766: davsd GEtvv--I pgime CARB_BACSU : 1001- 1007: dvirn GEaqfv-I ntltk CARB_ECOLI : 381- 386: qmksv GEvma--I grtqq CARB_ECOLI : 769- 774: daicd GEmvl--I ggime CARB_ECOLI : 1007- 1012: drikn GEyty--I intts CARB_ECOLI : 1007- 1013: drikn GEytyi-I nttsg CARB_METBA : 232- 237: emkst GEvmg--I dydfg CARB_METBA : 377- 382: etmkk GEelt--I ksine CARB_TRICU : 444- 449: amksv GEvma--I grtfe CARB_TRICU : 1163- 1168: giawt GEayc--I ilipg CARB_TRICU : 1163- 1169: giawt GEayci-I lipgi CARB_YEAST : 399- 404: smksv GEvma--I grnye CARB_YEAST : 853- 860: qiikd GEhtlkvI ecnir CARY_BACSU : 380- 385: kmkat GEvma--I ernle CARY_BACSU : 544- 550: ystyf GEtdgd-I srkek CARY_BACSU : 763- 768: dlisd GEevf--I ptyte COAC_CHICK : 564- 571: hcfsw GEnreeaI snmvv COAC_CHICK : 794- 799: mtlta GEsgc--I hyvkr COAC_CHICK : 846- 852: stalr GEklhr-I fhyvl COAC_CHICK : 1753- 1759: hvedn GEsryk-I tdiig COAC_RAT : 563- 570: hcfsw GEnreeaI snmvv COAC_RAT : 1775- 1781: hvede GEsryk-I tdiig COAC_YEAST : 1684- 1690: rtvin GEerfv-I ktiig COAC_YEAST : 1946- 1953: ndfnn GEqlpmmI lanwr CPSM_HUMAN : 796- 801: smksv GEvma--I grtfe CPSM_RAT : 796- 801: smksv GEvma--I grtfe DUR1_YEAST : 588- 595: veles GEwiksfI ceesg DUR1_YEAST : 642- 648: lianr GEiavr-I iktlk DUR1_YEAST : 642- 649: lianr GEiavriI ktlkk HFA1_YEAST : 478- 484: dfsir GEfktp-I eylie PCCA_HUMAN : 47- 54: lvanr GEiacrvI rtckk PCCA_RAT : 48- 55: lianr GEiacrvI ktcrk PYC1_YEAST : 17- 22: nfnll GEknk--I lvanr PYC1_YEAST : 28- 34: lvanr GEipir-I frtah PYC1_YEAST : 1073- 1078: yfdln GEmrk--I rvadr PYC2_YEAST : 18- 23: nfsll GEknk--I lvanr PYC2_YEAST : 29- 35: lvanr GEipir-I frsah PYC2_YEAST : 1074- 1079: yfeln GElrk--I rvadk PYR1_DICDI : 736- 741: smksv GEvms--I grkfe PYR1_DICDI : 898- 905: ymtyn GEtndvnI neksy PYR1_DICDI : 1963- 1970: ssvak GEsiadtI qtles PYR1_DROME : 778- 783: smksv GEvma--I grqlr PYR1_MESAU : 763- 768: cmksv GEvmg--I grsfe PYR1_MESAU : 1244- 1250: triim GEkvep-I glmtg PYR1_MESAU : 1790- 1795: rvvlr GEvay--I dgqvl PYR1_SCHPO : 843- 848: amksv GEvms--I grtfe PYR1_SCHPO : 1271- 1276: aaaki GEaln--I tgpyn PYR1_SCHPO : 2017- 2024: ssvnk GEsladtI rtlgc PYR1_YEAST : 807- 812: smksv GEvms--I grtfe PYR1_YEAST : 1991- 1998: ssvkk GEtlqdtI rtlac R 18: 11.5102 103( 29) A-x(1,2)-E-x(4,5)-G Occurences: 103(29) ACCA_MYCLE : 52- 59: phvrl Ad-Eafal-G ghtsa ACCA_MYCLE : 52- 60: phvrl Ad-EafalgG htsae ACCA_MYCLE : 191- 200: elyes AvrEatvafG rgecf ACCA_MYCLE : 340- 347: ipcgh Ai-Efrin-G edagr ACCA_MYCLE : 412- 420: ararr AldEfeve-G latvi ACCA_MYCTU : 56- 64: lgpap Ar-EsyldiG kvlda ACCA_MYCTU : 184- 193: ealvs ArrEamssfG ddtlf ACCA_MYCTU : 347- 354: yaedp Ar-Eflpt-G grvla ACCA_MYCTU : 347- 355: yaedp Ar-EflptgG rvlav ACCA_MYCTU : 359- 367: ggrvl AvfEpagp-G vrvds ACCA_MYCTU : 429- 436: lrfll Ad-Ervrv-G dldta ACCC_ANASP : 46- 53: lhvql Ad-Eavci-G epasa ACCC_ANASP : 120- 128: gdkst Ak-EtmqkaG vptvp ACCC_ANASP : 185- 194: klfla AqgEagaafG nagvy ACCC_ANASP : 407- 415: nrmkr AlrEcait-G lptti ACCC_ECOLI : 45- 52: khvll Ad-Etvci-G papsv ACCC_ECOLI : 405- 413: armkn AlqEliid-G iktnv ACCC_HAEIN : 45- 52: khvll Ad-Etici-G papsa ACCC_HAEIN : 263- 271: srcan AcvEigyr-G agtfe ACCC_HAEIN : 405- 413: rrmqn AlsEtiid-G iktni ACCC_PSEAE : 45- 52: mhlsl Ad-Esvci-G papat ACCC_PSEAE : 263- 271: arcvq AciEigyr-G agtfe ACCC_PSEAE : 405- 413: armrn AldElivd-G iktnt CARB_BACCL : 23- 30: ivigq Aa-Efdya-G tqacl CARB_BACCL : 99- 106: tglnl Av-Elaka-G vleec CARB_BACCL : 378- 386: gtqmk AtgEvmai-G rtfee CARB_BACCL : 643- 650: tainl Aa-Elear-G vrllg CARB_BACCL : 716- 724: vlggr Am-EivynrG ellhy CARB_BACCL : 759- 768: evdai AdgEtvvipG imehi CARB_BACSU : 23- 30: iiigq Aa-Efdya-G tqacl CARB_BACSU : 99- 106: tglnl Av-Elser-G vlaec CARB_BACSU : 378- 386: gtqmk AtgEvmai-G rtlee CARB_BACSU : 643- 650: tainl Ad-Elsar-G vkilg CARB_ECOLI : 22- 29: ivigq Ac-Efdys-G aqack CARB_ECOLI : 98- 105: talnc Al-Elerq-G vleef CARB_ECOLI : 700- 708: taiem Av-EkakeiG yplvv CARB_ECOLI : 816- 823: qvqkl Af-Elqvr-G lmnvq CARB_METBA : 18- 26: tsqke Ai-EvakriG fpvlv CARB_METBA : 94- 103: dviig AimEhieeaG vhsgd CARB_METBA : 284- 293: kklqa AglElmgteG tvnyl CARB_METBA : 369- 377: aiaaa AaiEtmkk-G eelti CARB_METBA : 370- 377: iaaaa Ai-Etmkk-G eelti CARB_TRICU : 91- 98: lsigq Ag-Efdys-G sqaik CARB_TRICU : 756- 764: sslas Ak-EfanrvG ypvli CARB_TRICU : 832- 841: kllvh AvsEhvenaG vhsgd CARB_YEAST : 44- 51: lsigq Ag-Efdys-G sqaik CARB_YEAST : 796- 805: nvlvh AisEhvenaG vhsgd CARY_BACSU : 23- 30: iiigq Aa-Efdys-G tqgci CARY_BACSU : 99- 106: talnl Av-Eleet-G vlkeh CARY_BACSU : 398- 406: iqkag AslElkni-G thlpe CARY_BACSU : 646- 654: qtain Aa-EalekaG itllg COAC_CHICK : 312- 320: pvmik As-EggggkG irkvn COAC_CHICK : 577- 585: snmvv AlkElsir-G dfrtt COAC_CHICK : 1414- 1423: lvtke AsfEylqneG erlll COAC_CHICK : 1679- 1687: vlflr As-ElarthG ipriy COAC_RAT : 311- 319: pvmik As-EggggkG irkvn COAC_RAT : 576- 584: snmvv AlkElsir-G dfrtt COAC_RAT : 1436- 1445: lvtke AsfEylqneG erlll COAC_RAT : 1701- 1709: llflr As-ElaraeG ipriy COAC_YEAST : 253- 261: pvmik As-EggggkG irqve COAC_YEAST : 526- 534: khmvv AlkElsir-G dfrtt COAC_YEAST : 1025- 1032: kvalq Ar-Eiliq-G alpsv COAC_YEAST : 1764- 1771: clltg Ap-Estna-G revyt CPSM_HUMAN : 68- 76: hpssv Ag-EvvfntG lggyp CPSM_HUMAN : 438- 445: lsigq Ag-Efdys-G sqavk CPSM_HUMAN : 1191- 1200: rvish AisEhvedaG vhsen CPSM_RAT : 68- 76: hpssv Ag-EvvfntG lggys CPSM_RAT : 438- 445: lsigq Ag-Efdys-G sqavk CPSM_RAT : 1115- 1123: ntlne Al-EfansvG ypcll CPSM_RAT : 1191- 1200: rvish AisEhvedaG vhsgd DUR1_YEAST : 286- 294: vlfsn Av-EnlsrtG anvie DUR1_YEAST : 1035- 1043: sklnq AleEtkvy-G citni DUR1_YEAST : 1035- 1043: sklnq Al-EetkvyG citni DUR1_YEAST : 1079- 1086: qyept Ai-Eitlp-G ahtsi DUR1_YEAST : 1131- 1138: dyrtp Ai-Evtlt-G psivf HFA1_YEAST : 190- 198: ssped Al-EkakliG fpvmi HFA1_YEAST : 205- 213: pvmik As-EggggkG irrvd HFA1_YEAST : 720- 728: dspsk An-EsslyrG elpvl PCCA_HUMAN : 81- 88: vhvkm Ad-Eavcv-G papts PCCA_HUMAN : 132- 140: farcl Aa-EdvvfiG pdtha PCCA_RAT : 82- 89: vhvkm Ad-Eavcv-G papts PCCA_RAT : 102- 111: ylnmd AimEaikktG aqavh PCCA_RAT : 133- 141: fakcl Aa-EdvtfiG pdtha PYC1_YEAST : 62- 69: thkqk Ad-Eayvi-G evgqy PYC1_YEAST : 204- 213: dafqr AtsEartafG ngtcf PYC1_YEAST : 430- 438: rkmir AliEfrir-G vktni PYC1_YEAST : 808- 817: inall AslEgnidtG inveh PYC1_YEAST : 883- 892: aqtkr AyrEanyllG divkv PYC2_YEAST : 63- 70: mhrlk Ad-Eayvi-G eegqy PYC2_YEAST : 205- 214: dafqr AtsEartafG ngtcf PYC2_YEAST : 431- 439: rkmir AliEfrir-G vktni PYC2_YEAST : 809- 818: inall AslEgnidtG inveh PYC2_YEAST : 884- 893: aetkr AyrEanyllG divkv PYR1_DICDI : 142- 150: ikeyk Aa-EnnkktG ekrkn PYR1_DICDI : 381- 388: lsigq Ag-Efdys-G sqaik PYR1_DICDI : 760- 767: mvmdg Av-Egfqa-G vfpts PYR1_DICDI : 1128- 1137: rivlf AisEhvenaG vhsgd PYR1_DROME : 424- 431: lsigq Ag-Efdys-G sqain PYR1_DROME : 1093- 1101: tnlqs Ai-EfceevG ypclv PYR1_MESAU : 24- 32: aavst Ag-EvvfqtG mvgyp PYR1_MESAU : 409- 416: lsigq Ag-Efdys-G sqaik PYR1_MESAU : 1150- 1159: vvsai AisEhvenaG vhsgd PYR1_MESAU : 1537- 1546: alflg AssEnagtlG avags PYR1_SCHPO : 490- 497: lsigq Ag-Efdys-G sqaik PYR1_YEAST : 44- 52: aeksv Ag-ElvfqtG mvgyp PYR1_YEAST : 454- 461: lsigq Ag-Efdys-G sqaik S 19: 11.5102 70( 29) A-x(1,2)-E-x(3,4)-G Occurences: 70(29) ACCA_MYCLE : 52- 59: phvrl Ad-EafalG ghtsa ACCA_MYCLE : 340- 347: ipcgh Ai-EfrinG edagr ACCA_MYCLE : 412- 420: ararr AldEfeveG latvi ACCA_MYCTU : 347- 354: yaedp Ar-EflptG grvla ACCA_MYCTU : 359- 367: ggrvl AvfEpagpG vrvds ACCA_MYCTU : 429- 436: lrfll Ad-ErvrvG dldta ACCC_ANASP : 46- 53: lhvql Ad-EavciG epasa ACCC_ANASP : 407- 415: nrmkr AlrEcaitG lptti ACCC_ECOLI : 45- 52: khvll Ad-EtvciG papsv ACCC_ECOLI : 405- 413: armkn AlqEliidG iktnv ACCC_HAEIN : 45- 52: khvll Ad-EticiG papsa ACCC_HAEIN : 263- 271: srcan AcvEigyrG agtfe ACCC_HAEIN : 405- 413: rrmqn AlsEtiidG iktni ACCC_PSEAE : 45- 52: mhlsl Ad-EsvciG papat ACCC_PSEAE : 263- 271: arcvq AciEigyrG agtfe ACCC_PSEAE : 405- 413: armrn AldElivdG iktnt CARB_BACCL : 23- 30: ivigq Aa-EfdyaG tqacl CARB_BACCL : 99- 106: tglnl Av-ElakaG vleec CARB_BACCL : 378- 386: gtqmk AtgEvmaiG rtfee CARB_BACCL : 643- 650: tainl Aa-ElearG vrllg CARB_BACSU : 23- 30: iiigq Aa-EfdyaG tqacl CARB_BACSU : 99- 106: tglnl Av-ElserG vlaec CARB_BACSU : 378- 386: gtqmk AtgEvmaiG rtlee CARB_BACSU : 643- 650: tainl Ad-ElsarG vkilg CARB_BACSU : 966- 972: gynil At-Egta-G ylkea CARB_ECOLI : 22- 29: ivigq Ac-EfdysG aqack CARB_ECOLI : 98- 105: talnc Al-ElerqG vleef CARB_ECOLI : 816- 823: qvqkl Af-ElqvrG lmnvq CARB_METBA : 369- 377: aiaaa AaiEtmkkG eelti CARB_METBA : 370- 377: iaaaa Ai-EtmkkG eelti CARB_TRICU : 91- 98: lsigq Ag-EfdysG sqaik CARB_YEAST : 44- 51: lsigq Ag-EfdysG sqaik CARY_BACSU : 23- 30: iiigq Aa-EfdysG tqgci CARY_BACSU : 99- 106: talnl Av-EleetG vlkeh CARY_BACSU : 398- 406: iqkag AslElkniG thlpe COAC_CHICK : 312- 318: pvmik As-Eggg-G kgirk COAC_CHICK : 577- 585: snmvv AlkElsirG dfrtt COAC_CHICK : 2086- 2093: hmemy AdrEsrg-G ilepe COAC_CHICK : 2212- 2219: kkihd AnpEltd-G qiqam COAC_RAT : 311- 317: pvmik As-Eggg-G kgirk COAC_RAT : 576- 584: snmvv AlkElsirG dfrtt COAC_RAT : 2234- 2241: kkihs AnpEltd-G qiqam COAC_YEAST : 253- 259: pvmik As-Eggg-G kgirq COAC_YEAST : 526- 534: khmvv AlkElsirG dfrtt COAC_YEAST : 1025- 1032: kvalq Ar-EiliqG alpsv COAC_YEAST : 1764- 1771: clltg Ap-EstnaG revyt CPSM_HUMAN : 438- 445: lsigq Ag-EfdysG sqavk CPSM_RAT : 438- 445: lsigq Ag-EfdysG sqavk DUR1_YEAST : 1035- 1043: sklnq AleEtkvyG citni DUR1_YEAST : 1079- 1086: qyept Ai-EitlpG ahtsi DUR1_YEAST : 1131- 1138: dyrtp Ai-EvtltG psivf DUR1_YEAST : 1721- 1728: kdsit AfqEgql-G eraee HFA1_YEAST : 205- 211: pvmik As-Eggg-G kgirr PCCA_HUMAN : 81- 88: vhvkm Ad-EavcvG papts PCCA_RAT : 82- 89: vhvkm Ad-EavcvG papts PYC1_YEAST : 62- 69: thkqk Ad-EayviG evgqy PYC1_YEAST : 430- 438: rkmir AliEfrirG vktni PYC1_YEAST : 597- 603: lagaf Al-Ecwg-G atfdv PYC2_YEAST : 63- 70: mhrlk Ad-EayviG eegqy PYC2_YEAST : 431- 439: rkmir AliEfrirG vktni PYC2_YEAST : 598- 604: lagaf Al-Ecwg-G atfdv PYR1_DICDI : 381- 388: lsigq Ag-EfdysG sqaik PYR1_DICDI : 760- 767: mvmdg Av-EgfqaG vfpts PYR1_DROME : 75- 82: nygvp ApdEdeh-G lplhf PYR1_DROME : 424- 431: lsigq Ag-EfdysG sqain PYR1_MESAU : 409- 416: lsigq Ag-EfdysG sqaik PYR1_SCHPO : 490- 497: lsigq Ag-EfdysG sqaik PYR1_YEAST : 454- 461: lsigq Ag-EfdysG sqaik PYR1_YEAST : 1969- 1976: cssfi AamErlg-G rivnv PYR1_YEAST : 1970- 1976: ssfia Am-Erlg-G rivnv T 20: 11.5102 60( 29) I-x(4,5)-A-x(1,2)-E Occurences: 60(29) ACCA_MYCLE : 335- 342: likdp Ipcgh-Ai-E fring ACCA_MYCLE : 576- 583: ahkdg Iitgl-Av-E agtai ACCA_MYCTU : 330- 338: faqnd IelrghAi-E arvya ACCC_ANASP : 401- 410: drata InrmkrAlrE caitg ACCC_ECOLI : 63- 71: ksyln IpaiisAa-E itgav ACCC_ECOLI : 399- 408: nrdva IarmknAlqE liidg ACCC_HAEIN : 63- 71: ksyln IpaiiaAa-E vtgad ACCC_HAEIN : 63- 71: ksyln Ipaii-AaaE vtgad ACCC_HAEIN : 328- 336: fkqed IkvkghAm-E crina ACCC_HAEIN : 399- 408: treva IrrmqnAlsE tiidg ACCC_PSEAE : 63- 71: qsylq IpaiiaAa-E vtgat ACCC_PSEAE : 63- 71: qsylq Ipaii-AaaE vtgat CARB_BACCL : 18- 25: igsgp Ivigq-Aa-E fdyag CARB_BACSU : 18- 25: igsgp Iiigq-Aa-E fdyag CARB_BACSU : 960- 968: krfha IgynilAt-E gtagy CARB_ECOLI : 17- 24: lgagp Ivigq-Ac-E fdysg CARB_METBA : 69- 78: ehpil IddfleAasE idvda CARB_METBA : 365- 372: tmqaa Iaaaa-Ai-E tmkkg CARB_TRICU : 740- 749: silds IgvdqpAwtE assla CARB_YEAST : 164- 171: dinip Iaesf-Ac-E tvdea CARB_YEAST : 357- 366: elpnp ItkttvAnfE psldy CARY_BACSU : 18- 25: igsgp Iiigq-Aa-E fdysg CARY_BACSU : 393- 401: nleaa Iqkag-AslE lknig CARY_BACSU : 523- 530: tpsfk Ivdtc-Aa-E fdakt CARY_BACSU : 644- 651: ggqta Inaae-Al-E kagit COAC_CHICK : 571- 580: nreea IsnmvvAlkE lsirg COAC_CHICK : 1958- 1966: arlgg IpvgvvAv-E trtve COAC_CHICK : 2281- 2290: yilkq IrslvqAnpE vamds COAC_RAT : 570- 579: nreea IsnmvvAlkE lsirg COAC_RAT : 1980- 1988: arlgg IpvgvvAv-E trtve COAC_RAT : 2303- 2312: yvlkq IrslvqAnpE vamds COAC_YEAST : 272- 281: reedf IalyhqAanE ipgsp COAC_YEAST : 723- 732: ngehi IkgqpyAeiE vmkmq COAC_YEAST : 2075- 2083: evhqq Iskql-AdrE rellp CPSM_HUMAN : 561- 568: einek Iapsf-Av-E sieda CPSM_RAT : 561- 568: einek Iapsf-Av-E smeda CPSM_RAT : 851- 859: psstr IyaiakAl-E nnmsl DUR1_YEAST : 1029- 1037: drdda IsklnqAl-E etkvy DUR1_YEAST : 1029- 1038: drdda IsklnqAleE tkvyg DUR1_YEAST : 1525- 1533: kitsn IirlpmAf-E dsktl DUR1_YEAST : 1526- 1533: itsni Irlpm-Af-E dsktl HFA1_YEAST : 224- 233: neddf IalyrqAvnE tpgsp PCCA_HUMAN : 526- 534: srmpv Ikpdi-AnwE lsvkl PCCA_HUMAN : 612- 619: vykvn Iltrl-Aa-E lnkfm PCCA_RAT : 365- 373: hkqed IpisgwAv-E crvya PCCA_RAT : 528- 536: srvpv Irpdv-AkwE lsvkl PCCA_RAT : 614- 621: vykvh Iltkl-Aa-E lnkfm PYC1_YEAST : 32- 40: rgeip IrifrtAh-E lsmqt PYC1_YEAST : 803- 811: tsqps Inall-AslE gnidt PYC2_YEAST : 33- 41: rgeip IrifrsAh-E lsmrt PYC2_YEAST : 804- 812: tsqps Inall-AslE gnidt PYR1_DICDI : 137- 144: vstke Ikeyk-Aa-E nnkkt PYR1_DICDI : 299- 307: wktyf Inand-AsnE giyhe PYR1_DICDI : 478- 485: vlgtp Ietii-At-E drgif PYR1_DICDI : 694- 703: alrnt ItkkttAcfE psldy PYR1_DICDI : 1281- 1289: yvkgl IstgfkAp-E knvll PYR1_DROME : 539- 547: ragne Igeqv-ApsE avysv PYR1_DROME : 1638- 1646: arkee IqlirsAk-E kgvkv PYR1_MESAU : 525- 533: armae Igehv-ApsE aansl PYR1_SCHPO : 1216- 1224: enake IeldavAr-E gkmvm PYR1_SCHPO : 1773- 1782: gvrea IpllltAvnE grltl PYR1_YEAST : 1105- 1114: rmldq IgvdqpAwkE ltsmd PYR1_YEAST : 1863- 1871: iteea IadnldAa-E daipe Number of patterns evaluated by Pratt:10588 Total running time: 67 seconds