------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 13 sequences from file CHROMO_2 PATTERN CONSERVATION: CM: min Nr of Seqs to Match 13 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 50 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename CHROMO_2.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: CHD1_MOUSE 1711 HP1_DROME 206 HP1_DROVI 213 HP1_HUMAN 191 MOD1_MOUSE 185 MOD2_MOUSE 173 MOD3_MOUSE 519 PC_DROME 390 SUV9_DROME 635 SWI6_SCHPO 328 YEZ4_YEAST 1468 YNZ8_CAEEL 339 YO82_CAEEL 304 Pratt run started at Thu Feb 6 19:07:33 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 12.0102 64( 13) E-x(1,2)-E-E 2: 12.0102 25( 13) E-x(0,1)-E-x(3)-D 3: 11.5102 32( 13) K-x(0,1)-E-x(3,4)-K 4: 11.5102 31( 13) E-x(2,3)-V-x(1,2)-K 5: 11.5102 21( 13) K-x(3,5)-S-x(2)-A 6: 11.5102 25( 13) A-x(2,3)-S-x(0,1)-S 7: 11.5102 32( 13) A-x(1,2)-S-x(0,1)-S 8: 11.5102 42( 13) K-x(1,3)-K-x(5)-K 9: 11.5102 27( 13) S-x(2,4)-K-R 10: 11.5102 42( 13) S-x(0,1)-K-x(1,2)-K 11: 11.5102 31( 13) S-x(2,3)-K-x(0,1)-K 12: 11.5102 31( 13) S-x(3,5)-K-x-K 13: 11.5102 31( 13) S-x(1,3)-K-x-K 14: 11.5102 26( 13) E-x(3,4)-S-x(0,1)-K 15: 11.5102 29( 13) E-x(3,4)-K-x(1,2)-K 16: 11.5102 22( 13) S-x(3,4)-E-x(0,1)-S 17: 11.5102 25( 13) K-x(0,1)-E-x(4,5)-K 18: 11.5102 32( 13) K-x-K-x(3,5)-K 19: 11.5102 30( 13) K-x(2,3)-E-x(4,5)-K 20: 11.5102 29( 13) K-x(2,3)-E-x(3,4)-K Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 14.2109 19( 13) E-x(0,1)-E-x-[DENS]-x-D B 2: 13.9228 43( 13) E-x(1,2)-E-E-x(3)-[ADEQS] C 3: 13.7298 17( 13) S-x(0,1)-K-x(1,2)-K-x(3)-[DEGS] D 4: 12.9344 22( 13) E-x(3,4)-K-x(1,2)-K-x(3)-[ADEGQST] E 5: 12.9332 22( 13) K-x(2,3)-E-x(3,4)-K-x(2)-[DEGNQST] F 6: 11.5102 32( 13) K-x(0,1)-E-x(3,4)-K G 7: 11.5102 31( 13) E-x(2,3)-V-x(1,2)-K H 8: 11.5102 21( 13) K-x(3,5)-S-x(2)-A I 9: 11.5102 25( 13) A-x(2,3)-S-x(0,1)-S J 10: 11.5102 32( 13) A-x(1,2)-S-x(0,1)-S K 11: 11.5102 42( 13) K-x(1,3)-K-x(5)-K L 12: 11.5102 27( 13) S-x(2,4)-K-R M 13: 11.5102 31( 13) S-x(2,3)-K-x(0,1)-K N 14: 11.5102 31( 13) S-x(3,5)-K-x-K O 15: 11.5102 31( 13) S-x(1,3)-K-x-K P 16: 11.5102 26( 13) E-x(3,4)-S-x(0,1)-K Q 17: 11.5102 22( 13) S-x(3,4)-E-x(0,1)-S R 18: 11.5102 25( 13) K-x(0,1)-E-x(4,5)-K S 19: 11.5102 32( 13) K-x-K-x(3,5)-K T 20: 11.5102 30( 13) K-x(2,3)-E-x(4,5)-K Best patterns with alignements: fitness hits(seqs) Pattern A 1: 14.2109 19( 13) E-x(0,1)-E-x-[DENS]-x-D Occurences: 19(13) CHD1_MOUSE : 164- 170: lgsds EsEeErD ksscd CHD1_MOUSE : 216- 222: qidss EdEdDeD ydndk HP1_DROME : 56- 62: tentw EpEnNlD cqdli HP1_DROVI : 56- 62: tentw EpEgNlD cqdli HP1_HUMAN : 52- 58: ehntw EpEkNlD cpeli MOD1_MOUSE : 53- 59: edntw EpEeNlD cpdli MOD2_MOUSE : 52- 58: adntw EpEeNlD cpeli MOD3_MOUSE : 122- 128: ssssd EeEdDsD ldskr MOD3_MOUSE : 123- 128: sssde E-EdDsD ldskr PC_DROME : 97- 103: kepdp EpEsEeD eytft SUV9_DROME : 169- 174: svfgc E-EhDvD kipsl SUV9_DROME : 596- 601: pikag E-ElSfD yirad SWI6_SCHPO : 74- 79: eeegg E-EeEeD eyvve YEZ4_YEAST : 66- 71: defed E-EgEeD sgede YEZ4_YEAST : 74- 80: eedsg EdEdEeD feedd YNZ8_CAEEL : 185- 190: rnwld E-EsSdD eaett YO82_CAEEL : 144- 150: skaed EeEvEdD eepvp YO82_CAEEL : 145- 150: kaede E-EvEdD eepvp YO82_CAEEL : 195- 201: kmeed EkEeEeD vqles B 2: 13.9228 43( 13) E-x(1,2)-E-E-x(3)-[ADEQS] Occurences: 43(13) CHD1_MOUSE : 164- 172: lgsds EseEErdkS scdgt CHD1_MOUSE : 242- 249: nvsyk Ed-EEmktD sddll CHD1_MOUSE : 331- 338: ihntw Et-EEtlkQ qnvrg CHD1_MOUSE : 979- 986: lfkep Eg-EEqepQ emdid CHD1_MOUSE : 1054- 1061: qrrrl Ee-EErqkE leeiy HP1_DROME : 18- 25: kvsda Ee-EEeeyA vekii HP1_DROME : 19- 27: vsdae EeeEEyavE kiidr HP1_DROME : 20- 27: sdaee Ee-EEyavE kiidr HP1_DROVI : 18- 25: assga Ee-EEeeyA vekil HP1_DROVI : 19- 27: ssgae EeeEEyavE kildr HP1_DROVI : 20- 27: sgaee Ee-EEyavE kildr HP1_HUMAN : 15- 23: dssss EdeEEyvvE kvldr MOD1_MOUSE : 12- 20: kkkve EvlEEeeeE yvvek MOD1_MOUSE : 16- 24: eevle EeeEEyvvE kvldr MOD1_MOUSE : 17- 24: evlee Ee-EEyvvE kvldr MOD2_MOUSE : 16- 23: kveea Ep-EEfvvE kvldr MOD3_MOUSE : 44- 51: khnsw Ep-EEnilD prlll PC_DROME : 291- 298: aesga Ee-EEvanE egnqq SUV9_DROME : 416- 424: gckct EdtEEctaS tkcca SUV9_DROME : 506- 514: gefvc EyiEEiitS deane SWI6_SCHPO : 71- 79: nakee EggEEeeeD eyvve YEZ4_YEAST : 64- 71: dedef Ed-EEgeeD sgede YEZ4_YEAST : 66- 74: defed EegEEdsgE dedee YEZ4_YEAST : 67- 74: efede Eg-EEdsgE dedee YEZ4_YEAST : 76- 83: dsged Ed-EEdfeE dddyy YEZ4_YEAST : 577- 585: fenqd EeqEEyihD lhrri YEZ4_YEAST : 578- 585: enqde Eq-EEyihD lhrri YNZ8_CAEEL : 56- 63: dedtw Ep-EEdlqE casev YO82_CAEEL : 142- 149: kkska Ed-EEeveD deepv YO82_CAEEL : 142- 150: kkska EdeEEvedD eepvp YO82_CAEEL : 160- 168: pkkkk EvqEEpeeE esveg YO82_CAEEL : 164- 172: kevqe EpeEEesvE gedee YO82_CAEEL : 174- 181: esveg Ed-EEesqE vedlk YO82_CAEEL : 189- 197: dlked EkmEEdekE eeedv YO82_CAEEL : 195- 203: kmeed EkeEEedvQ lesek YO82_CAEEL : 212- 219: eknek Ee-EEekvE ekkee YO82_CAEEL : 212- 220: eknek EeeEEkveE kkeee YO82_CAEEL : 213- 220: kneke Ee-EEkveE kkeee YO82_CAEEL : 216- 224: keeee EkvEEkkeE eeeee YO82_CAEEL : 220- 228: eekve EkkEEeeeE eeeei YO82_CAEEL : 223- 230: veekk Ee-EEeeeE eeiql YO82_CAEEL : 223- 231: veekk EeeEEeeeE eiqlv YO82_CAEEL : 224- 231: eekke Ee-EEeeeE eiqlv YO82_CAEEL : 224- 232: eekke EeeEEeeeE iqlvi YO82_CAEEL : 225- 232: ekkee Ee-EEeeeE iqlvi YO82_CAEEL : 226- 234: kkeee EeeEEeeiQ lvive YO82_CAEEL : 227- 234: keeee Ee-EEeeiQ lvive C 3: 13.7298 17( 13) S-x(0,1)-K-x(1,2)-K-x(3)-[DEGS] Occurences: 17(13) CHD1_MOUSE : 198- 206: qnrsk S-KngKkilG qkkrq CHD1_MOUSE : 736- 744: nykal S-KgsKgstS gflni HP1_DROME : 91- 99: drpss SaKa-KetqG rasss HP1_DROVI : 129- 136: agpag S-Ks-KrveS edtgd HP1_HUMAN : 87- 95: rekse SnKr-KsnfS nsadd HP1_HUMAN : 103- 110: addik S-Kk-KreqS ndiar MOD1_MOUSE : 98- 105: dkgee S-Kp-KkkkE esekp MOD1_MOUSE : 98- 106: dkgee S-KpkKkkeE sekpr MOD2_MOUSE : 69- 78: edfln SqKagKekdG tkrks MOD2_MOUSE : 92- 99: sesdd S-Ks-KkkrD aadkp MOD3_MOUSE : 102- 109: epdap S-Ks-KsssS sssst PC_DROME : 8- 15: grgkg S-Kg-KlgrD natdd SUV9_DROME : 200- 208: aptpn S-KrsKnnmG viakr SWI6_SCHPO : 159- 168: eakep SpKsrKtdeD khdkd YEZ4_YEAST : 109- 116: ksksk S-Kp-KsqsE kqstv YEZ4_YEAST : 1234- 1242: ttptp SkKg-KgitG sskkv YEZ4_YEAST : 1234- 1242: ttptp S-KkgKgitG sskkv YNZ8_CAEEL : 100- 109: nksqk SkKrsKtvsD hesnh YO82_CAEEL : 206- 215: dvqle SeKneKeeeE ekvee D 4: 12.9344 22( 13) E-x(3,4)-K-x(1,2)-K-x(3)-[ADEGQST] Occurences: 22(13) CHD1_MOUSE : 592- 602: lltty Eill-Kd-KaflG glnwa HP1_DROME : 40- 50: rkgkv Eyyl-Kw-KgypE tentw HP1_DROVI : 40- 50: rkgkv Eyyl-Kw-KgyaE tentw HP1_HUMAN : 36- 46: vkgqv Eyll-Kw-KgfsE ehntw HP1_HUMAN : 65- 75: pelis Efmk-Ky-KkmkE gennk HP1_HUMAN : 65- 76: pelis Efmk-KykKmkeG ennkp MOD1_MOUSE : 37- 47: vkgkv Eyll-Kw-KgfsD edntw MOD1_MOUSE : 96- 107: sedkg EeskpKk-KkeeS ekprg MOD1_MOUSE : 96- 108: sedkg EeskpKkkKeesE kprgf MOD1_MOUSE : 97- 107: edkge Eskp-Kk-KkeeS ekprg MOD1_MOUSE : 97- 108: edkge EskpkKk-KeesE kprgf MOD1_MOUSE : 97- 108: edkge Eskp-KkkKeesE kprgf MOD2_MOUSE : 36- 46: vngkv Eyfl-Kw-KgftD adntw MOD2_MOUSE : 75- 86: qkagk EkdgtKr-KslsD sesdd MOD2_MOUSE : 88- 99: slsds EsddsKs-KkkrD aadkp MOD2_MOUSE : 88- 100: slsds EsddsKskKkrdA adkpr MOD3_MOUSE : 66- 78: kehek EvqnrKrgKrprG rprkh PC_DROME : 42- 52: kkgvv Eyrv-Kw-KgwnQ ryntw SUV9_DROME : 81- 93: itikl ErlseKkiKnllT skqqr SWI6_SCHPO : 80- 92: eeeed EyvveKvlKhrmA rkggg SWI6_SCHPO : 157- 168: kpeak Epsp-KsrKtdeD khdkd YEZ4_YEAST : 1073- 1084: eknrk Eile-KleKhatA yrakl YNZ8_CAEEL : 86- 97: kteli Ellq-KqiKknkS qkskk YNZ8_CAEEL : 202- 213: plsdv EkiasKv-KvvkA veeka YO82_CAEEL : 64- 75: aarka EikakKd-KmaaG kkgas YO82_CAEEL : 64- 75: aarka Eika-KkdKmaaG kkgas YO82_CAEEL : 151- 162: evedd EepvpKk-KkevQ eepee YO82_CAEEL : 151- 163: evedd EepvpKkkKevqE epeee YO82_CAEEL : 152- 162: vedde Epvp-Kk-KkevQ eepee YO82_CAEEL : 152- 163: vedde EpvpkKk-KevqE epeee YO82_CAEEL : 152- 163: vedde Epvp-KkkKevqE epeee E 5: 12.9332 22( 13) K-x(2,3)-E-x(3,4)-K-x(2)-[DEGNQST] Occurences: 22(13) CHD1_MOUSE : 968- 979: lsail KfgaEelf-KepE geeqe CHD1_MOUSE : 1362- 1372: plpse Ksd-Eddd-KlnD skpes HP1_DROME : 36- 47: drrvr KgkvEyyl-KwkG ypete HP1_DROVI : 36- 47: drrvr KgkvEyyl-KwkG yaete HP1_HUMAN : 32- 43: drrvv KgqvEyll-KwkG fseeh HP1_HUMAN : 71- 83: fmkky KkmkEgennKprE ksesn HP1_HUMAN : 72- 83: mkkyk Kmk-EgennKprE ksesn MOD1_MOUSE : 33- 44: drrvv KgkvEyll-KwkG fsded MOD1_MOUSE : 94- 105: sdsed Kge-EskpkKkkE esekp MOD1_MOUSE : 101- 112: eeskp KkkkEese-KprG fargl MOD1_MOUSE : 102- 112: eskpk Kkk-Eese-KprG fargl MOD2_MOUSE : 71- 83: flnsq KagkEkdgtKrkS lsdse MOD3_MOUSE : 24- 35: skrlr KgklEylv-KwrG wsskh PC_DROME : 38- 49: qkrvk KgvvEyrv-KwkG wnqry SUV9_DROME : 333- 343: qrepq Kig-Eral-KsmQ ikraq SWI6_SCHPO : 164- 175: spksr Ktd-EdkhdKdsN ekied YEZ4_YEAST : 208- 219: dlnnc KenyEfli-KwtD eshlh YEZ4_YEAST : 943- 955: eeelk KlqdEeqkrKdeE yvkeq YEZ4_YEAST : 1072- 1083: eeknr KeilEkle-KhaT ayrak YNZ8_CAEEL : 230- 241: pstpp Kpr-EvvikKdpS espva YO82_CAEEL : 20- 31: ehrkk KgksEfyi-KwlG ydhth YO82_CAEEL : 208- 220: qlese KnekEeeeeKveE kkeee F 6: 11.5102 32( 13) K-x(0,1)-E-x(3,4)-K Occurences: 32(13) CHD1_MOUSE : 241- 247: vnvsy K-EdeemK tdsdd HP1_DROME : 38- 44: rvrkg KvEyyl-K wkgyp HP1_DROVI : 38- 44: rvrkg KvEyyl-K wkgya HP1_HUMAN : 74- 80: kykkm K-EgennK preks HP1_HUMAN : 84- 91: nkpre KsEsnkrK snfsn HP1_HUMAN : 154- 159: dlvla K-Eanv-K cpqiv HP1_HUMAN : 184- 190: edaen K-EketaK s MOD1_MOUSE : 35- 41: rvvkg KvEyll-K wkgfs MOD1_MOUSE : 79- 86: ahetd KsEggkrK adsds MOD1_MOUSE : 94- 101: sdsed KgEeskpK kkkee MOD1_MOUSE : 103- 109: skpkk KkEese-K prgfa MOD1_MOUSE : 104- 109: kpkkk K-Eese-K prgfa MOD1_MOUSE : 150- 155: dlvpa K-Eanv-K cpqvv MOD2_MOUSE : 34- 40: rvvng KvEyfl-K wkgft MOD2_MOUSE : 74- 80: sqkag K-EkdgtK rksls MOD2_MOUSE : 144- 149: dlvla K-Eanm-K cpqiv MOD3_MOUSE : 26- 32: rlrkg KlEylv-K wrgws MOD3_MOUSE : 65- 71: kkehe K-EvqnrK rgkrp MOD3_MOUSE : 397- 404: ptdnn KgEkltcK atalp PC_DROME : 126- 132: sathd K-EskkeK khhhh SUV9_DROME : 79- 86: rniti KlErlseK kiknl SWI6_SCHPO : 156- 161: kkpea K-Epsp-K srktd SWI6_SCHPO : 177- 184: kdsne KiEdvneK tikfa YEZ4_YEAST : 952- 958: eeqkr KdEeyv-K eqlem YEZ4_YEAST : 1072- 1077: eeknr K-Eile-K lekha YEZ4_YEAST : 1095- 1101: ksgei KaEnqp-K dnplt YEZ4_YEAST : 1177- 1182: ssnwt K-Eede-K lligv YNZ8_CAEEL : 217- 223: kavee KaEepv-K rpstp YO82_CAEEL : 22- 28: rkkkg KsEfyi-K wlgyd YO82_CAEEL : 62- 68: reaar KaEika-K kdkma YO82_CAEEL : 62- 69: reaar KaEikakK dkmaa YO82_CAEEL : 190- 196: lkede KmEede-K eeeed YO82_CAEEL : 211- 217: sekne KeEeee-K veekk YO82_CAEEL : 211- 217: sekne K-EeeeeK veekk G 7: 11.5102 31( 13) E-x(2,3)-V-x(1,2)-K Occurences: 31(13) CHD1_MOUSE : 71- 77: sdtsr Enk-VqaK ppkvd HP1_DROME : 22- 28: aeeee EeyaVe-K iidrr HP1_DROME : 23- 28: eeeee Eya-Ve-K iidrr HP1_DROVI : 22- 28: aeeee EeyaVe-K ildrr HP1_DROVI : 23- 28: eeeee Eya-Ve-K ildrr HP1_HUMAN : 17- 24: sssed EeeyVveK vldrr HP1_HUMAN : 18- 24: ssede EeyvVe-K vldrr HP1_HUMAN : 18- 24: ssede Eey-VveK vldrr HP1_HUMAN : 19- 24: sedee Eyv-Ve-K vldrr HP1_HUMAN : 147- 154: wkdtd EadlVlaK eanvk MOD1_MOUSE : 18- 25: vleee EeeyVveK vldrr MOD1_MOUSE : 19- 25: leeee EeyvVe-K vldrr MOD1_MOUSE : 19- 25: leeee Eey-VveK vldrr MOD1_MOUSE : 20- 25: eeeee Eyv-Ve-K vldrr MOD1_MOUSE : 143- 150: wknsd EadlVpaK eanvk MOD2_MOUSE : 18- 24: eeaep EefvVe-K vldrr MOD2_MOUSE : 18- 24: eeaep Eef-VveK vldrr MOD2_MOUSE : 19- 24: eaepe Efv-Ve-K vldrr MOD2_MOUSE : 137- 144: wkdsd EadlVlaK eanmk MOD3_MOUSE : 139- 146: gprgr EthpVpqK kaqil PC_DROME : 42- 48: kkgvv Eyr-VkwK gwnqr SUV9_DROME : 169- 175: svfgc EehdVd-K ipsln SUV9_DROME : 170- 175: vfgce Ehd-Vd-K ipsln SUV9_DROME : 406- 413: dvpkp EagiVgcK ctedt SWI6_SCHPO : 78- 85: geeee EdeyVveK vlkhr SWI6_SCHPO : 80- 85: eeeed Eyv-Ve-K vlkhr YEZ4_YEAST : 192- 199: lktsl EegkVleK tvpdl YEZ4_YEAST : 193- 199: ktsle Egk-VleK tvpdl YEZ4_YEAST : 669- 675: lfdna Eer-VlqK fgdgk YNZ8_CAEEL : 22- 28: egksd EifeVe-K ilahk YNZ8_CAEEL : 136- 142: ksakn Etp-VssK vpkvp YO82_CAEEL : 151- 156: evedd Eep-Vp-K kkkev YO82_CAEEL : 151- 157: evedd Eep-VpkK kkevq YO82_CAEEL : 214- 221: nekee EeekVeeK keeee YO82_CAEEL : 215- 221: ekeee Eek-VeeK keeee H 8: 11.5102 21( 13) K-x(3,5)-S-x(2)-A Occurences: 21(13) CHD1_MOUSE : 88- 95: gaefw Kssp--SilA vqrsa CHD1_MOUSE : 697- 706: llrrv KkdvekSlpA kveqi CHD1_MOUSE : 698- 706: lrrvk Kdvek-SlpA kveqi HP1_DROME : 84- 92: ksaas Kkdrp-SssA kaket HP1_DROME : 85- 92: saask Kdrp--SssA kaket HP1_DROME : 85- 94: saask KdrpssSakA ketqg HP1_DROVI : 101- 110: sstkv KetgrtSttA snssg HP1_HUMAN : 89- 98: ksesn KrksnfSnsA ddiks HP1_HUMAN : 91- 98: esnkr Ksnf--SnsA ddiks MOD1_MOUSE : 137- 144: lmflm Kwkn--SdeA dlvpa MOD2_MOUSE : 131- 138: lmflm Kwkd--SdeA dlvla MOD3_MOUSE : 414- 423: papsv KrdtvkSvaA sggqe PC_DROME : 383- 390: rerdm Kgds--SpvA SUV9_DROME : 127- 135: rrlct Kpass-SmpA stssv SWI6_SCHPO : 33- 41: lpsmt Keaia-ShkA dsgss YEZ4_YEAST : 1123- 1130: vlfnf Kgvk--SlnA eslls YEZ4_YEAST : 1436- 1443: pekyr Khlw--SysA nfwpa YNZ8_CAEEL : 149- 157: pkvpt Kaalk-SyeA tvsgp YNZ8_CAEEL : 237- 246: revvi KkdpseSpvA sassv YNZ8_CAEEL : 238- 246: evvik Kdpse-SpvA sassv YO82_CAEEL : 76- 83: kmaag Kkga--SskA sasvs YO82_CAEEL : 89- 96: sasvs Kasa--StpA rgaka I 9: 11.5102 25( 13) A-x(2,3)-S-x(0,1)-S Occurences: 25(13) CHD1_MOUSE : 27- 32: ddcgs Asg-SgS gsssg CHD1_MOUSE : 115- 121: qqqrp AssnSgS eedss CHD1_MOUSE : 951- 955: lhtgs Aps-S-S tpfnk CHD1_MOUSE : 1177- 1182: ngcvk AlkdS-S sgter CHD1_MOUSE : 1177- 1183: ngcvk AlkdSsS gtera HP1_DROME : 101- 106: etqgr Ass-StS taskr HP1_DROVI : 80- 84: kdean Aaa-S-S sssss HP1_DROVI : 80- 85: kdean AaasS-S ssssk HP1_DROVI : 80- 85: kdean Aaa-SsS ssssk HP1_DROVI : 80- 86: kdean AaasSsS ssskk HP1_DROVI : 81- 85: deana Aas-S-S ssssk HP1_DROVI : 81- 86: deana AassS-S ssskk HP1_DROVI : 81- 86: deana Aas-SsS ssskk HP1_DROVI : 81- 87: deana AassSsS sskke HP1_DROVI : 82- 86: eanaa Ass-S-S ssskk HP1_DROVI : 82- 87: eanaa AsssS-S sskke HP1_DROVI : 82- 87: eanaa Ass-SsS sskke HP1_DROVI : 82- 88: eanaa AsssSsS skker HP1_DROVI : 110- 114: rtstt Asn-S-S gskrk HP1_DROVI : 110- 116: rtstt AsnsSgS krkse HP1_HUMAN : 9- 13: ktkrt Ads-S-S sedee HP1_HUMAN : 9- 14: ktkrt AdssS-S edeee HP1_HUMAN : 9- 14: ktkrt Ads-SsS edeee MOD1_MOUSE : 125- 129: eriig Atd-S-S gelmf MOD2_MOUSE : 119- 123: eriig Atd-S-S gelmf MOD3_MOUSE : 85- 90: prkht Ats-ScS rrskl MOD3_MOUSE : 100- 106: lkepd ApskSkS sssss PC_DROME : 117- 121: vdthq Att-S-S athdk SUV9_DROME : 135- 139: sssmp Ast-S-S vdrrt SUV9_DROME : 322- 327: laqyr Aag-SrS qrepq SWI6_SCHPO : 41- 46: iashk AdsgS-S dneve YEZ4_YEAST : 984- 989: ngdgt Aan-SdS dddst YEZ4_YEAST : 1220- 1225: vhnpv Akk-SaS ssdtt YEZ4_YEAST : 1295- 1300: rqrkp Anh-SkS mtpei YNZ8_CAEEL : 246- 250: sespv Asa-S-S vipts YO82_CAEEL : 83- 88: gassk Asa-SvS kasas YO82_CAEEL : 276- 282: gsssa AagnSaS kpevs YO82_CAEEL : 277- 282: sssaa Agn-SaS kpevs J 10: 11.5102 32( 13) A-x(1,2)-S-x(0,1)-S Occurences: 32(13) CHD1_MOUSE : 27- 32: ddcgs AsgSgS gsssg CHD1_MOUSE : 115- 119: qqqrp As-SnS gseed CHD1_MOUSE : 951- 954: lhtgs Ap-S-S stpfn CHD1_MOUSE : 951- 955: lhtgs ApsS-S tpfnk CHD1_MOUSE : 951- 955: lhtgs Ap-SsS tpfnk CHD1_MOUSE : 1671- 1674: qldhr Aa-S-S gprsp HP1_DROME : 101- 104: etqgr As-S-S tstas HP1_DROME : 101- 106: etqgr AssStS taskr HP1_DROVI : 80- 84: kdean AaaS-S sssss HP1_DROVI : 80- 85: kdean AaaSsS ssssk HP1_DROVI : 81- 84: deana Aa-S-S sssss HP1_DROVI : 81- 85: deana AasS-S ssssk HP1_DROVI : 81- 85: deana Aa-SsS ssssk HP1_DROVI : 81- 86: deana AasSsS ssskk HP1_DROVI : 82- 85: eanaa As-S-S ssssk HP1_DROVI : 82- 86: eanaa AssS-S ssskk HP1_DROVI : 82- 86: eanaa As-SsS ssskk HP1_DROVI : 82- 87: eanaa AssSsS sskke HP1_DROVI : 110- 114: rtstt AsnS-S gskrk HP1_DROVI : 127- 131: epagp Ag-SkS krves HP1_HUMAN : 9- 12: ktkrt Ad-S-S ssede HP1_HUMAN : 9- 13: ktkrt AdsS-S sedee HP1_HUMAN : 9- 13: ktkrt Ad-SsS sedee HP1_HUMAN : 9- 14: ktkrt AdsSsS edeee MOD1_MOUSE : 87- 91: ggkrk Ad-SdS edkge MOD1_MOUSE : 125- 129: eriig AtdS-S gelmf MOD2_MOUSE : 119- 123: eriig AtdS-S gelmf MOD3_MOUSE : 85- 88: prkht At-S-S csrrs MOD3_MOUSE : 85- 90: prkht AtsScS rrskl MOD3_MOUSE : 100- 104: lkepd Ap-SkS kssss MOD3_MOUSE : 243- 247: lmkgm Ag-SpS rggiw PC_DROME : 117- 121: vdthq AttS-S athdk SUV9_DROME : 129- 132: lctkp As-S-S mpast SUV9_DROME : 135- 139: sssmp AstS-S vdrrt SUV9_DROME : 322- 327: laqyr AagSrS qrepq SUV9_DROME : 323- 327: aqyra Ag-SrS qrepq SWI6_SCHPO : 41- 45: iashk Ad-SgS sdnev YEZ4_YEAST : 521- 524: hrlkn Ae-S-S lyesl YEZ4_YEAST : 984- 989: ngdgt AanSdS dddst YEZ4_YEAST : 985- 989: gdgta An-SdS dddst YEZ4_YEAST : 1220- 1225: vhnpv AkkSaS ssdtt YEZ4_YEAST : 1224- 1227: vakks As-S-S dttpt YEZ4_YEAST : 1295- 1300: rqrkp AnhSkS mtpei YNZ8_CAEEL : 246- 250: sespv AsaS-S vipts YO82_CAEEL : 83- 88: gassk AsaSvS kasas YO82_CAEEL : 277- 282: sssaa AgnSaS kpevs K 11: 11.5102 42( 13) K-x(1,3)-K-x(5)-K Occurences: 42(13) CHD1_MOUSE : 199- 208: nrsks Kng-KkilgqK krqid CHD1_MOUSE : 199- 209: nrsks KngkKilgqkK rqids CHD1_MOUSE : 1333- 1343: gskrr KtraKkskamK sikvk CHD1_MOUSE : 1337- 1346: rktra Kks-KamksiK vkeei CHD1_MOUSE : 1338- 1346: ktrak Ks--KamksiK vkeei CHD1_MOUSE : 1343- 1352: kskam Ksi-KvkeeiK sdssp HP1_DROME : 36- 44: drrvr Kg--KveyylK wkgyp HP1_DROME : 75- 85: yeasr KdeeKsaaskK drpss HP1_DROVI : 36- 44: drrvr Kg--KveyylK wkgya HP1_HUMAN : 71- 80: fmkky Kkm-KegennK preks HP1_HUMAN : 72- 80: mkkyk Km--KegennK preks MOD1_MOUSE : 33- 41: drrvv Kg--KveyllK wkgfs MOD1_MOUSE : 99- 109: kgees KpkkKkeeseK prgfa MOD1_MOUSE : 101- 109: eeskp Kk--KkeeseK prgfa MOD2_MOUSE : 71- 80: flnsq Kag-KekdgtK rksls MOD2_MOUSE : 74- 82: sqkag Ke--KdgtkrK slsds MOD2_MOUSE : 93- 103: esdds KskkKrdaadK prgfa MOD2_MOUSE : 95- 103: ddsks Kk--KrdaadK prgfa MOD3_MOUSE : 24- 32: skrlr Kg--KleylvK wrgws MOD3_MOUSE : 61- 71: lafqk KeheKevqnrK rgkrp MOD3_MOUSE : 154- 164: qilva KpelKdpirkK rgrkp PC_DROME : 216- 226: kaevl KesgKigvtiK tspdg SUV9_DROME : 86- 95: erlse Kki-KnlltsK qqrqq SUV9_DROME : 87- 95: rlsek Ki--KnlltsK qqrqq SWI6_SCHPO : 85- 94: eyvve Kvl-KhrmarK gggye SWI6_SCHPO : 143- 151: rpeps Kr--KrtarpK kpeak YEZ4_YEAST : 98- 106: kqnrs Kp--KsrtksK skskp YEZ4_YEAST : 100- 110: nrskp KsrtKsksksK pksqs YEZ4_YEAST : 104- 112: pksrt Ks--KskskpK sqsek YEZ4_YEAST : 950- 958: qdeeq Kr--KdeeyvK eqlem YEZ4_YEAST : 1289- 1299: tgpsk KrqrKpanhsK smtpe YNZ8_CAEEL : 90- 99: iellq Kqi-KknksqK skkrs YNZ8_CAEEL : 93- 102: lqkqi Kkn-KsqkskK rsktv YNZ8_CAEEL : 94- 102: qkqik Kn--KsqkskK rsktv YNZ8_CAEEL : 96- 105: qikkn Ksq-KskkrsK tvsdh YNZ8_CAEEL : 124- 134: sygtp KtskKskksaK netpv YO82_CAEEL : 18- 28: ilehr KkkgKsefyiK wlgyd YO82_CAEEL : 19- 28: lehrk Kkg-KsefyiK wlgyd YO82_CAEEL : 20- 28: ehrkk Kg--KsefyiK wlgyd YO82_CAEEL : 68- 77: aeika Kkd-KmaagkK gassk YO82_CAEEL : 69- 77: eikak Kd--KmaagkK gassk YO82_CAEEL : 186- 196: evedl KedeKmeedeK eeeed YO82_CAEEL : 208- 217: qlese Kne-KeeeeeK veekk L 12: 11.5102 27( 13) S-x(2,4)-K-R Occurences: 27(13) CHD1_MOUSE : 134- 140: edsdd SssgaKR kkhnd CHD1_MOUSE : 135- 140: dsdds Ssga-KR kkhnd CHD1_MOUSE : 136- 140: sddss Sga--KR kkhnd CHD1_MOUSE : 1100- 1106: gsdsd SiserKR pkkrg CHD1_MOUSE : 1102- 1106: dsdsi Ser--KR pkkrg CHD1_MOUSE : 1312- 1318: likll SrdlaKR eaqrl CHD1_MOUSE : 1570- 1575: dsykk Sdsr-KR pyssf HP1_DROME : 106- 111: assst Stas-KR kseep HP1_DROME : 120- 126: eptap SgnksKR ttdae HP1_DROVI : 113- 118: ttasn Ssgs-KR kseep HP1_DROVI : 114- 118: tasns Sgs--KR kseep HP1_DROVI : 129- 133: agpag Sks--KR vesed HP1_HUMAN : 85- 90: kprek Sesn-KR ksnfs HP1_HUMAN : 103- 107: addik Skk--KR eqsnd MOD1_MOUSE : 80- 85: hetdk Segg-KR kadsd MOD2_MOUSE : 92- 98: sesdd SkskkKR daadk MOD2_MOUSE : 94- 98: sddsk Skk--KR daadk MOD3_MOUSE : 127- 133: eeedd SdldsKR gprgr PC_DROME : 79- 85: qtnks SgtpsKR gikkk SUV9_DROME : 341- 346: eralk Smqi-KR aqfvr SWI6_SCHPO : 12- 17: rsyrr Ssts-KR svidd SWI6_SCHPO : 13- 17: syrrs Sts--KR svidd SWI6_SCHPO : 142- 146: grpep Skr--KR tarpk YEZ4_YEAST : 48- 52: dnikq Srr--KR mttie YEZ4_YEAST : 1109- 1113: pltrl Slk--KR ekkav YNZ8_CAEEL : 97- 103: ikknk SqkskKR sktvs YO82_CAEEL : 110- 114: pppkk Spp--KR qrlag M 13: 11.5102 31( 13) S-x(2,3)-K-x(0,1)-K Occurences: 31(13) CHD1_MOUSE : 135- 141: dsdds SsgaKrK khnde CHD1_MOUSE : 136- 141: sddss Sga-KrK khnde CHD1_MOUSE : 198- 203: qnrsk SkngK-K ilgqk HP1_DROME : 80- 85: kdeek SaasK-K drpss HP1_DROME : 89- 95: kkdrp SssaKaK etqgr HP1_DROME : 90- 95: kdrps Ssa-KaK etqgr HP1_DROME : 106- 112: assst StasKrK seept HP1_DROME : 120- 125: eptap Sgn-KsK rttda HP1_DROVI : 86- 91: aasss SsssK-K erpgs HP1_DROVI : 87- 91: assss Sss-K-K erpgs HP1_DROVI : 96- 101: kerpg Sst-KvK etgrt HP1_DROVI : 113- 119: ttasn SsgsKrK seepa HP1_DROVI : 114- 119: tasns Sgs-KrK seepa HP1_HUMAN : 64- 69: cpeli SefmK-K ykkmk HP1_HUMAN : 85- 91: kprek SesnKrK snfsn MOD1_MOUSE : 80- 86: hetdk SeggKrK adsds MOD1_MOUSE : 98- 102: dkgee Skp-K-K kkees MOD1_MOUSE : 98- 103: dkgee SkpkK-K keese MOD1_MOUSE : 98- 103: dkgee Skp-KkK keese MOD1_MOUSE : 98- 104: dkgee SkpkKkK eesek MOD2_MOUSE : 89- 95: lsdse SddsKsK kkrda MOD2_MOUSE : 92- 96: sesdd Sks-K-K krdaa MOD2_MOUSE : 92- 97: sesdd SkskK-K rdaad MOD2_MOUSE : 92- 97: sesdd Sks-KkK rdaad MOD3_MOUSE : 90- 96: atssc SrrsKlK epdap PC_DROME : 128- 133: thdke SkkeK-K hhhhh SUV9_DROME : 84- 89: klerl Sek-KiK nllts SWI6_SCHPO : 58- 62: dhesk Sss-K-K lkena SWI6_SCHPO : 58- 64: dhesk SsskKlK enake SWI6_SCHPO : 59- 64: hesks Ssk-KlK enake YEZ4_YEAST : 101- 106: rskpk Srt-KsK skskp YEZ4_YEAST : 105- 110: ksrtk Sks-KsK pksqs YEZ4_YEAST : 107- 112: rtksk Sks-KpK sqsek YNZ8_CAEEL : 97- 102: ikknk SqksK-K rsktv YNZ8_CAEEL : 126- 131: gtpkt SkksK-K sakne YO82_CAEEL : 133- 138: tdeeh SsadK-K skaed YO82_CAEEL : 134- 138: deehs Sad-K-K skaed YO82_CAEEL : 134- 140: deehs SadkKsK aedee N 14: 11.5102 31( 13) S-x(3,5)-K-x-K Occurences: 31(13) CHD1_MOUSE : 134- 141: edsdd Sssga-KrK khnde CHD1_MOUSE : 135- 141: dsdds Ssga--KrK khnde CHD1_MOUSE : 179- 186: cdgte Sdyep-KnK vrsrk HP1_DROME : 89- 95: kkdrp Sssa--KaK etqgr HP1_DROME : 104- 112: grass StstasKrK seept HP1_DROME : 106- 112: assst Stas--KrK seept HP1_DROVI : 111- 119: tstta SnssgsKrK seepa HP1_DROVI : 113- 119: ttasn Ssgs--KrK seepa HP1_HUMAN : 64- 71: cpeli Sefmk-KyK kmkeg HP1_HUMAN : 85- 91: kprek Sesn--KrK snfsn HP1_HUMAN : 97- 104: snfsn Saddi-KsK kkreq MOD1_MOUSE : 80- 86: hetdk Segg--KrK adsds MOD1_MOUSE : 98- 104: dkgee Skpk--KkK eesek MOD2_MOUSE : 69- 76: edfln Sqkag-KeK dgtkr MOD2_MOUSE : 87- 95: kslsd SesddsKsK kkrda MOD2_MOUSE : 89- 95: lsdse Sdds--KsK kkrda MOD2_MOUSE : 89- 97: lsdse SddsksKkK rdaad MOD3_MOUSE : 19- 26: aecil Skrlr-KgK leylv MOD3_MOUSE : 88- 96: htats ScsrrsKlK epdap MOD3_MOUSE : 90- 96: atssc Srrs--KlK epdap PC_DROME : 83- 90: ssgtp Skrgi-KkK ekepd SUV9_DROME : 178- 186: vdkip SlngfaKlK rrrss SWI6_SCHPO : 56- 64: esdhe SkssskKlK enake SWI6_SCHPO : 58- 64: dhesk Sssk--KlK enake SWI6_SCHPO : 237- 244: iaetp Snvtp-KkK pspev YEZ4_YEAST : 101- 108: rskpk Srtks-KsK skpks YEZ4_YEAST : 105- 112: ksrtk Sksks-KpK sqsek YEZ4_YEAST : 1339- 1347: rlspn SptpplKsK vsrdn YNZ8_CAEEL : 250- 258: vasas SviptsKrK sinae YO82_CAEEL : 12- 20: lytve SilehrKkK gksef YO82_CAEEL : 133- 140: tdeeh Ssadk-KsK aedee YO82_CAEEL : 134- 140: deehs Sadk--KsK aedee O 15: 11.5102 31( 13) S-x(1,3)-K-x-K Occurences: 31(13) CHD1_MOUSE : 135- 141: dsdds SsgaKrK khnde CHD1_MOUSE : 136- 141: sddss Sga-KrK khnde CHD1_MOUSE : 1344- 1348: skamk Si--KvK eeiks HP1_DROME : 89- 95: kkdrp SssaKaK etqgr HP1_DROME : 90- 95: kdrps Ssa-KaK etqgr HP1_DROME : 91- 95: drpss Sa--KaK etqgr HP1_DROME : 106- 112: assst StasKrK seept HP1_DROME : 120- 125: eptap Sgn-KsK rttda HP1_DROVI : 96- 101: kerpg Sst-KvK etgrt HP1_DROVI : 97- 101: erpgs St--KvK etgrt HP1_DROVI : 113- 119: ttasn SsgsKrK seepa HP1_DROVI : 114- 119: tasns Sgs-KrK seepa HP1_HUMAN : 85- 91: kprek SesnKrK snfsn HP1_HUMAN : 87- 91: rekse Sn--KrK snfsn MOD1_MOUSE : 80- 86: hetdk SeggKrK adsds MOD1_MOUSE : 98- 103: dkgee Skp-KkK keese MOD1_MOUSE : 98- 104: dkgee SkpkKkK eesek MOD2_MOUSE : 89- 95: lsdse SddsKsK kkrda MOD2_MOUSE : 92- 97: sesdd Sks-KkK rdaad MOD3_MOUSE : 90- 96: atssc SrrsKlK epdap PC_DROME : 128- 132: thdke Sk--KeK khhhh SUV9_DROME : 84- 89: klerl Sek-KiK nllts SWI6_SCHPO : 58- 64: dhesk SsskKlK enake SWI6_SCHPO : 59- 64: hesks Ssk-KlK enake SWI6_SCHPO : 60- 64: eskss Sk--KlK enake YEZ4_YEAST : 101- 106: rskpk Srt-KsK skskp YEZ4_YEAST : 105- 110: ksrtk Sks-KsK pksqs YEZ4_YEAST : 107- 112: rtksk Sks-KpK sqsek YEZ4_YEAST : 1234- 1238: ttptp Sk--KgK gitgs YNZ8_CAEEL : 97- 101: ikknk Sq--KsK krskt YNZ8_CAEEL : 126- 130: gtpkt Sk--KsK ksakn YO82_CAEEL : 134- 140: deehs SadkKsK aedee P 16: 11.5102 26( 13) E-x(3,4)-S-x(0,1)-K Occurences: 26(13) CHD1_MOUSE : 1033- 1039: ddiel EpernS-K nweei CHD1_MOUSE : 1376- 1382: ndskp EskdrS-K ksvvs CHD1_MOUSE : 1376- 1383: ndskp EskdrSkK svvsd CHD1_MOUSE : 1703- 1710: hrstp EhtwsSrK t HP1_DROME : 78- 84: srkde EksaaS-K kdrps HP1_DROME : 78- 85: srkde EksaaSkK drpss HP1_DROVI : 92- 99: ssskk ErpgsStK vketg HP1_HUMAN : 83- 89: nnkpr Ekse-SnK rksnf MOD1_MOUSE : 66- 72: pdlia Eflq-SqK tahet MOD2_MOUSE : 64- 71: cpeli EdflnSqK agkek MOD2_MOUSE : 88- 93: slsds Esdd-S-K skkkr MOD3_MOUSE : 15- 20: qvfaa Ecil-S-K rlrkg MOD3_MOUSE : 97- 103: rsklk EpdapS-K sksss PC_DROME : 213- 220: tkrka EvlkeSgK igvti SUV9_DROME : 419- 426: ctedt EectaStK ccarf SUV9_DROME : 420- 426: tedte Ecta-StK ccarf SWI6_SCHPO : 34- 40: psmtk Eaia-ShK adsgs SWI6_SCHPO : 51- 57: sdnev EsdheS-K ssskk SWI6_SCHPO : 55- 61: vesdh EskssS-K klken SWI6_SCHPO : 55- 61: vesdh Esks-SsK klken SWI6_SCHPO : 55- 62: vesdh EskssSkK lkena SWI6_SCHPO : 154- 161: rpkkp EakepSpK srktd SWI6_SCHPO : 157- 164: kpeak EpspkSrK tdedk SWI6_SCHPO : 211- 217: pnghi EsdneS-K spsqk SWI6_SCHPO : 215- 222: iesdn EskspSqK esnes YEZ4_YEAST : 527- 533: essly Esln-SfK vanrm YEZ4_YEAST : 603- 609: lkkdv EkslpS-K teril YNZ8_CAEEL : 136- 142: ksakn EtpvsS-K vpkvp YNZ8_CAEEL : 136- 142: ksakn Etpv-SsK vpkvp YNZ8_CAEEL : 202- 207: plsdv Ekia-S-K vkvvk YO82_CAEEL : 259- 265: tpeps Epss-SeK avven Q 17: 11.5102 22( 13) S-x(3,4)-E-x(0,1)-S Occurences: 22(13) CHD1_MOUSE : 58- 64: dsgsd SgsqsE-S esdts CHD1_MOUSE : 60- 66: gsdsg SqsesE-S dtsre CHD1_MOUSE : 119- 125: passn Sgse-EdS sssed CHD1_MOUSE : 125- 131: gseed Ssss-EdS ddsss CHD1_MOUSE : 173- 179: erdks ScdgtE-S dyepk CHD1_MOUSE : 1356- 1363: iksds SplpsEkS deddd CHD1_MOUSE : 1688- 1695: rspyg SrspfEhS aehrs HP1_DROME : 73- 80: qqyea SrkdeEkS aaskk HP1_DROVI : 131- 136: pagsk Skrv-E-S edtgd HP1_HUMAN : 103- 110: addik SkkkrEqS ndiar MOD1_MOUSE : 91- 98: kadsd SedkgEeS kpkkk MOD2_MOUSE : 83- 89: gtkrk SlsdsE-S ddsks MOD3_MOUSE : 446- 452: alsel Stge-EnS ssdsd PC_DROME : 150- 156: ksern SgrrsE-S plthh SUV9_DROME : 246- 252: lgyhd SentwE-S lanva SWI6_SCHPO : 46- 52: adsgs SdnevE-S dhesk SWI6_SCHPO : 218- 224: dnesk SpsqkE-S nesed YEZ4_YEAST : 523- 528: lknae Ssly-E-S lnsfk YEZ4_YEAST : 1127- 1132: fkgvk Slna-E-S llsrv YNZ8_CAEEL : 259- 265: tskrk Sina-EtS ngrqr YO82_CAEEL : 126- 133: dirpd SdtdeEhS sadkk YO82_CAEEL : 280- 287: aaagn SaskpEvS avevv R 18: 11.5102 25( 13) K-x(0,1)-E-x(4,5)-K Occurences: 25(13) CHD1_MOUSE : 241- 247: vnvsy K-Edeem-K tdsdd CHD1_MOUSE : 960- 968: stpfn KeElsailK fgaee CHD1_MOUSE : 1374- 1382: klnds KpEskdrsK ksvvs CHD1_MOUSE : 1418- 1425: tfsic K-ErmrpvK aalkq HP1_DROME : 38- 46: rvrkg KvEyylkwK gypet HP1_DROVI : 38- 46: rvrkg KvEyylkwK gyaet HP1_HUMAN : 74- 80: kykkm K-Egenn-K preks HP1_HUMAN : 84- 91: nkpre KsEsnkr-K snfsn HP1_HUMAN : 184- 190: edaen K-Eketa-K s MOD1_MOUSE : 35- 43: rvvkg KvEyllkwK gfsde MOD1_MOUSE : 79- 86: ahetd KsEggkr-K adsds MOD1_MOUSE : 94- 101: sdsed KgEeskp-K kkkee MOD1_MOUSE : 94- 102: sdsed KgEeskpkK kkees MOD2_MOUSE : 34- 42: rvvng KvEyflkwK gftda MOD2_MOUSE : 74- 80: sqkag K-Ekdgt-K rksls MOD3_MOUSE : 65- 71: kkehe K-Evqnr-K rgkrp MOD3_MOUSE : 96- 103: rrskl K-EpdapsK sksss MOD3_MOUSE : 397- 404: ptdnn KgEkltc-K atalp PC_DROME : 126- 132: sathd K-Eskke-K khhhh PC_DROME : 126- 133: sathd K-EskkekK hhhhh SUV9_DROME : 79- 86: rniti KlErlse-K kiknl SUV9_DROME : 79- 87: rniti KlErlsekK iknll SWI6_SCHPO : 33- 40: lpsmt K-EaiashK adsgs SWI6_SCHPO : 177- 184: kdsne KiEdvne-K tikfa YEZ4_YEAST : 1402- 1409: ksldr K-EwakilK teltt YNZ8_CAEEL : 134- 142: skksa KnEtpvssK vpkvp YO82_CAEEL : 62- 69: reaar KaEikak-K dkmaa YO82_CAEEL : 211- 217: sekne K-Eeeee-K veekk S 19: 11.5102 32( 13) K-x-K-x(3,5)-K Occurences: 32(13) CHD1_MOUSE : 184- 191: sdyep KnKvrsr-K pqnrs CHD1_MOUSE : 197- 203: pqnrs KsKngk--K ilgqk CHD1_MOUSE : 351- 358: kldny KkKdqet-K rwlkn CHD1_MOUSE : 1338- 1346: ktrak KsKamksiK vkeei CHD1_MOUSE : 1346- 1352: amksi KvKeei--K sdssp HP1_DROME : 36- 44: drrvr KgKveyylK wkgyp HP1_DROVI : 36- 44: drrvr KgKveyylK wkgya HP1_HUMAN : 72- 80: mkkyk KmKegennK preks HP1_HUMAN : 184- 190: edaen KeKeta--K s MOD1_MOUSE : 33- 41: drrvv KgKveyllK wkgfs MOD1_MOUSE : 101- 109: eeskp KkKkeeseK prgfa MOD1_MOUSE : 102- 109: eskpk KkKeese-K prgfa MOD2_MOUSE : 74- 80: sqkag KeKdgt--K rksls MOD2_MOUSE : 74- 82: sqkag KeKdgtkrK slsds MOD2_MOUSE : 95- 103: ddsks KkKrdaadK prgfa MOD3_MOUSE : 24- 32: skrlr KgKleylvK wrgws PC_DROME : 209- 216: pligt KrKaevl-K esgki SUV9_DROME : 87- 95: rlsek KiKnlltsK qqrqq SWI6_SCHPO : 62- 68: ksssk KlKena--K eeegg SWI6_SCHPO : 143- 151: rpeps KrKrtarpK kpeak YEZ4_YEAST : 98- 104: kqnrs KpKsrt--K sksks YEZ4_YEAST : 98- 106: kqnrs KpKsrtksK skskp YEZ4_YEAST : 104- 110: pksrt KsKsks--K pksqs YEZ4_YEAST : 104- 112: pksrt KsKskskpK sqsek YEZ4_YEAST : 106- 112: srtks KsKskp--K sqsek YEZ4_YEAST : 110- 117: sksks KpKsqse-K qstvk YEZ4_YEAST : 478- 484: tnpra KgKktm--K fnvll YEZ4_YEAST : 950- 958: qdeeq KrKdeeyvK eqlem YEZ4_YEAST : 1088- 1095: tayra KlKsgei-K aenqp YNZ8_CAEEL : 75- 81: aeyyk KlKvtd--K telie YNZ8_CAEEL : 94- 101: qkqik KnKsqks-K krskt YNZ8_CAEEL : 94- 102: qkqik KnKsqkskK rsktv YNZ8_CAEEL : 99- 105: knksq KsKkrs--K tvsdh YNZ8_CAEEL : 128- 134: pktsk KsKksa--K netpv YO82_CAEEL : 20- 28: ehrkk KgKsefyiK wlgyd YO82_CAEEL : 69- 76: eikak KdKmaag-K kgass YO82_CAEEL : 69- 77: eikak KdKmaagkK gassk T 20: 11.5102 30( 13) K-x(2,3)-E-x(4,5)-K Occurences: 30(13) CHD1_MOUSE : 352- 362: ldnyk KkdqEtkrwlK naspe CHD1_MOUSE : 353- 362: dnykk Kdq-EtkrwlK naspe CHD1_MOUSE : 697- 707: llrrv KkdvEkslpaK veqil CHD1_MOUSE : 698- 707: lrrvk Kdv-EkslpaK veqil CHD1_MOUSE : 1484- 1492: wifvs Kft-Efdar-K lhkly HP1_DROME : 36- 46: drrvr KgkvEyylkwK gypet HP1_DROME : 75- 84: yeasr Kde-EksaasK kdrps HP1_DROVI : 36- 46: drrvr KgkvEyylkwK gyaet HP1_HUMAN : 32- 42: drrvv KgqvEyllkwK gfsee HP1_HUMAN : 71- 80: fmkky KkmkEgenn-K preks HP1_HUMAN : 72- 80: mkkyk Kmk-Egenn-K preks HP1_HUMAN : 80- 89: egenn Kpr-EksesnK rksnf MOD1_MOUSE : 33- 43: drrvv KgkvEyllkwK gfsde MOD1_MOUSE : 94- 102: sdsed Kge-Eskpk-K kkees MOD1_MOUSE : 94- 103: sdsed Kge-EskpkkK keese MOD2_MOUSE : 71- 80: flnsq KagkEkdgt-K rksls MOD3_MOUSE : 94- 103: csrrs Klk-EpdapsK sksss PC_DROME : 38- 48: qkrvk KgvvEyrvkwK gwnqr PC_DROME : 258- 268: qqqae KiasEaatqlK seqqa SUV9_DROME : 69- 79: qtvrf KnelErnitiK lerls SWI6_SCHPO : 164- 172: spksr Ktd-Edkhd-K dsnek YEZ4_YEAST : 112- 122: skskp KsqsEkqstvK iptrf YEZ4_YEAST : 497- 506: yeyil KdraElgsi-K wqfma YEZ4_YEAST : 599- 609: ilrrl KkdvEkslpsK teril YEZ4_YEAST : 600- 609: lrrlk Kdv-EkslpsK teril YEZ4_YEAST : 919- 927: geefl Kqf-Evtdy-K adidw YEZ4_YEAST : 943- 952: eeelk KlqdEeqkr-K deeyv YNZ8_CAEEL : 19- 28: eareg Ksd-EifeveK ilahk YNZ8_CAEEL : 230- 238: pstpp Kpr-Evvik-K dpses YO82_CAEEL : 208- 217: qlese KnekEeeee-K veekk YO82_CAEEL : 211- 221: sekne KeeeEekveeK keeee Number of patterns evaluated by Pratt:2253 Total running time: 3 seconds