------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 36 sequences from file CATALASE_1 PATTERN CONSERVATION: CM: min Nr of Seqs to Match 36 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 44 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename CATALASE_1.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: BCA_STRVL 483 CAT1_GOSHI 492 CAT1_LYCES 492 CAT1_MAIZE 492 CAT2_GOSHI 492 CAT2_MAIZE 491 CAT3_MAIZE 495 CATA_ARATH 492 CATA_BOVIN 506 CATA_CANTR 484 CATA_DROME 506 CATA_HAEIN 508 CATA_HANPO 507 CATA_HELAN 492 CATA_HUMAN 527 CATA_IPOBA 492 CATA_LACSK 478 CATA_LISSE 488 CATA_MICLU 497 CATA_MOUSE 527 CATA_ORYSA 491 CATA_PEA 494 CATA_PENJA 670 CATA_PHAAU 492 CATA_PROMI 484 CATA_RAT 527 CATA_RICCO 90 CATA_SOYBN 492 CATA_YEAST 515 CATB_BACFR 486 CATB_BACSU 686 CATE_ECOLI 753 CATF_PSESY 513 CATT_YEAST 562 CATV_BACSU 483 CAT_BACFI 449 Pratt run started at Thu Feb 6 19:04:49 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 11.5102 60( 36) V-x(0,1)-G-x(2,3)-S 2: 11.5102 60( 36) V-x-G-x(1,3)-S 3: 11.5102 63( 36) V-x(0,1)-G-x(2,3)-P 4: 11.5102 44( 36) N-N-x(1,3)-P 5: 11.5102 51( 36) N-x(0,2)-N-x(5)-E 6: 11.0102 45( 36) R-x(2,4)-G-x(0,1)-G 7: 11.0102 68( 36) R-x(3,5)-G-x(0,1)-S 8: 11.0102 71( 36) D-x(0,2)-R-x(2,3)-R 9: 11.0102 91( 36) D-x(2,3)-R-x(1,3)-R 10: 11.0102 49( 36) D-x(1,3)-R-x(1,2)-L 11: 11.0102 69( 36) E-x(2,3)-F-x(1,3)-P 12: 11.0102 66( 36) E-x(3,5)-V-x(2,3)-A 13: 11.0102 66( 36) R-x(0,2)-F-x(1,2)-V 14: 10.5102 107( 36) L-x(0,2)-N-x(0,2)-P 15: 10.5102 79( 36) D-x(1,3)-G-x(1,3)-A 16: 10.5102 51( 36) F-x(0,2)-E-x(0,2)-P 17: 10.5102 91( 36) L-x(2,4)-G-x(1,3)-P 18: 10.5102 66( 36) R-x(1,3)-V-x(1,3)-G 19: 10.5102 66( 36) R-x(2,4)-R-x(0,2)-G 20: 10.5102 107( 36) S-x(1,3)-D-x(3,5)-R Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 25.4139 36( 36) R-x(0,2)-F-x(1,2)-V-x(2)-[ADEGQS]-x(4)-[DEKR]-x(2)-[EKR]-x(3)-[AEG]-x-[AES]-x(4)-[QST] B 2: 13.7405 50( 36) V-[ADGP]-G-x(1,3)-S C 3: 13.2509 75( 36) D-x(2,3)-R-x(1,3)-R-[GILV] D 4: 13.1632 46( 36) N-x(0,2)-N-x(2)-[ADENQS]-x(2)-E E 5: 11.5102 60( 36) V-x(0,1)-G-x(2,3)-S F 6: 11.5102 63( 36) V-x(0,1)-G-x(2,3)-P G 7: 11.5102 44( 36) N-N-x(1,3)-P H 8: 11.0102 45( 36) R-x(2,4)-G-x(0,1)-G I 9: 11.0102 68( 36) R-x(3,5)-G-x(0,1)-S J 10: 11.0102 71( 36) D-x(0,2)-R-x(2,3)-R K 11: 11.0102 49( 36) D-x(1,3)-R-x(1,2)-L L 12: 11.0102 69( 36) E-x(2,3)-F-x(1,3)-P M 13: 11.0102 66( 36) E-x(3,5)-V-x(2,3)-A N 14: 10.5102 107( 36) L-x(0,2)-N-x(0,2)-P O 15: 10.5102 79( 36) D-x(1,3)-G-x(1,3)-A P 16: 10.5102 51( 36) F-x(0,2)-E-x(0,2)-P Q 17: 10.5102 91( 36) L-x(2,4)-G-x(1,3)-P R 18: 10.5102 66( 36) R-x(1,3)-V-x(1,3)-G S 19: 10.5102 66( 36) R-x(2,4)-R-x(0,2)-G T 20: 10.5102 107( 36) S-x(1,3)-D-x(3,5)-R Best patterns with alignements: fitness hits(seqs) Pattern A 1: 25.4139 36( 36) R-x(0,2)-F-x(1,2)-V-x(2)-[ADEGQS]-x(4)-[DEKR]-x(2)-[EKR]-x(3)-[AEG]-x-[AES]-x(4)-[QST] Occurences: 36(36) BCA_STRVL : 91- 117: tetfl R--FstVagSlgaaDavRdprGwAlkfyT eegny CAT1_GOSHI : 102- 128: tpviv R--FstVihErgspEtlRdprGfAvkfyT regnf CAT1_LYCES : 102- 128: tpvic R--FstVvhErgspEsiRdirGfAvkfyT regnf CAT1_MAIZE : 102- 128: tpviv R--FstVvhErgspEtlRdprGfAvkfyT regnf CAT2_GOSHI : 102- 128: tpliv R--FstVihErgspEtlRdprGfAvkfyT regnf CAT2_MAIZE : 101- 127: tpviv R--FstVihErgspEtlRdprGfAvkfyT regnw CAT3_MAIZE : 104- 130: tpviv R--FsqVipEpgsgRtiRdarGfAvkfyT regnw CATA_ARATH : 102- 128: tpviv R--FstVihArgspEtlRdprGfAvkfyT regnf CATA_BOVIN : 111- 137: tpiav R--FstVagEsgsaDtvRdprGfAvkfyT edgnw CATA_CANTR : 89- 115: trift R--FstVggElgsaDtaRdprGfAtkfyT eegnl CATA_DROME : 110- 136: tplav R--FstVggEsgsaDtaRdprGfAvkfyT edgvw CATA_HAEIN : 100- 126: temfa R--FttVagErgaaDaeRdirGfAlkfyT eegnw CATA_HANPO : 102- 128: trift R--FstVggEkgsaDtaRdprGfAtkfyT edgnl CATA_HELAN : 102- 128: tpviv R--FstVihErgspEtlRdprGfAvkfyT regnf CATA_HUMAN : 112- 138: tpiav R--FstVagEsgsaDtvRdprGfAvkfyT edgnw CATA_IPOBA : 102- 128: tpliv R--FstVihErgspEtiRdprGfAvkmyT rggnw CATA_LACSK : 90- 116: tplit R--FsqVagEagypDtyRdvrGfAvkfyT eegny CATA_LISSE : 92- 118: tevfa R--FstVihGqhspEtlRdprGfSvkfyT eegny CATA_MICLU : 91- 117: tevll R--FstVagEngspDtwRdtrGfAlrfyT segny CATA_MOUSE : 112- 138: tpiav R--FstVagEsgsaDtvRdprGfAvkfyT edgnw CATA_ORYSA : 102- 128: tpviv R--FstVihErgsqEtiRdprGfAvkfyT regnw CATA_PEA : 102- 128: tpviv R--FstVihErgspEtlRdprGfAvkfyT regny CATA_PENJA : 556- 582: vvtva Re-Fa-VlpQtaaaDaaEfvaAaSakafS sfpam CATA_PHAAU : 102- 128: tpviv R--FstVihErgspEtlRdprGfAvkfyT regnf CATA_PROMI : 91- 117: temfa R--FstVagErgaaDaeRdirGfAlkfyT eegnw CATA_RAT : 112- 138: tpiav R--FstVagEsgsaDtvRdprGfAvkfyT edgnw CATA_RICCO : 1- 28: ResFp-VpsAicsgKreKcviEkEnnfkQ pgery CATA_SOYBN : 102- 128: tpliv R--FstVihErgspEtlRdprGfAvkfyT regnf CATA_YEAST : 107- 133: tkclt R--FstVggDkgsaDtvRdprGfAtkfyT eegnl CATB_BACFR : 91- 117: tecfv R--FstVagErgaaDaeRdirGfAmkfyT eegnw CATB_BACSU : 115- 141: tpvfv R--FstVagSkgsaDtvRdarGfAtkfyT eegny CATE_ECOLI : 165- 191: tpvfv R--FstVqgGagsaDtvRdirGfAtkfyT eegif CATF_PSESY : 114- 140: tpvfv R--FssVvhGnhspEtlRdphGfAtkfyT adgnw CATT_YEAST : 101- 127: cpglv R--FstVggEsgtpDtaRdprGvSfkfyT ewgnh CATV_BACSU : 91- 117: tplfi R--FstVagElgsaDtvRdprGfAvkfyT eegny CAT_BACFI : 112- 138: tpvfv R--FstVagSkgsaEtvRdarGfAtkfyT eegny B 2: 13.7405 50( 36) V-[ADGP]-G-x(1,3)-S Occurences: 50(36) BCA_STRVL : 319- 325: spahf VPGigpS pdkml CAT1_GOSHI : 243- 249: deaik VGGanhS hatqd CAT1_GOSHI : 330- 336: cpaiv VPGiyyS ddkll CAT1_LYCES : 243- 249: eeair VGGtnhS hatkd CAT1_LYCES : 330- 336: npghi VPGiyyS edkll CAT1_MAIZE : 243- 249: neavt VGGtchS hatkd CAT2_GOSHI : 243- 249: deair VGGanhS hatqd CAT2_GOSHI : 330- 336: cpsli VPGiyyS ddkll CAT2_MAIZE : 329- 335: cpgli VPGiyyS ddkll CAT3_MAIZE : 245- 251: deear VGGrnhS htqdl CAT3_MAIZE : 332- 338: gpglv VPGiyyS ddkml CATA_ARATH : 330- 336: cpaii VPGihyS ddkll CATA_BOVIN : 115- 119: vrfst VAGe--S gsadt CATA_BOVIN : 115- 121: vrfst VAGesgS adtvr CATA_CANTR : 93- 99: trfst VGGelgS adtar CATA_DROME : 114- 118: vrfst VGGe--S gsadt CATA_DROME : 114- 120: vrfst VGGesgS adtar CATA_DROME : 338- 344: spahl VPGvepS pdkml CATA_HAEIN : 328- 334: apsnl VPGigaS pdrml CATA_HAEIN : 381- 387: dgqgr VDGnygS lphye CATA_HANPO : 106- 112: trfst VGGekgS adtar CATA_HANPO : 330- 336: spsht VPGmepS ndpvl CATA_HELAN : 330- 336: cpaii VPGiyyS ddkll CATA_HELAN : 451- 455: finrv VGGl--S dprvt CATA_HUMAN : 116- 120: vrfst VAGe--S gsadt CATA_HUMAN : 116- 122: vrfst VAGesgS adtvr CATA_IPOBA : 330- 336: dpahi VPGiyfS ddkml CATA_LACSK : 318- 324: spanl VPGieaS pdkll CATA_LISSE : 320- 326: npgvl VPGmlpS edrvl CATA_MICLU : 95- 101: lrfst VAGengS pdtwr CATA_MICLU : 319- 325: spsnt VPGiglS pdrml CATA_MOUSE : 116- 120: vrfst VAGe--S gsadt CATA_MOUSE : 116- 122: vrfst VAGesgS adtvr CATA_ORYSA : 243- 249: deatl VGGknhS hatqd CATA_ORYSA : 330- 336: gpglv VPGiyyS ddkml CATA_PEA : 243- 249: eeaiq VGGsnhS hatkd CATA_PENJA : 101- 107: aafst VAGakgS atvrd CATA_PHAAU : 243- 249: eeaik VGGanhS hatqd CATA_PHAAU : 330- 336: cpaii VPGvyyS ddkml CATA_PROMI : 319- 323: spani VPGi--S fspdk CATA_PROMI : 319- 325: spani VPGisfS pdkml CATA_PROMI : 372- 376: dgamr VDGn--S gngit CATA_RAT : 116- 120: vrfst VAGe--S gsadt CATA_RAT : 116- 122: vrfst VAGesgS adtvr CATA_RICCO : 49- 53: slnrl VGGf--S eprit CATA_SOYBN : 243- 249: deair VGGsnhS hatqd CATA_SOYBN : 330- 336: cpaii VPGvyyS ddkll CATA_YEAST : 111- 117: trfst VGGdkgS adtvr CATB_BACFR : 372- 378: dgamr VDGnygS akgye CATB_BACSU : 119- 125: vrfst VAGskgS adtvr CATE_ECOLI : 524- 528: eqrhi VDGf--S felsk CATF_PSESY : 340- 346: apanl VPGiepS edrll CATT_YEAST : 105- 109: vrfst VGGe--S gtpdt CATV_BACSU : 95- 101: irfst VAGelgS adtvr CATV_BACSU : 319- 325: spgtl VPGidvS pdkml CAT_BACFI : 116- 122: vrfst VAGskgS aetvr C 3: 13.2509 75( 36) D-x(2,3)-R-x(1,3)-R-[GILV] Occurences: 75(36) BCA_STRVL : 103- 110: slgaa Dav-Rdp-RG walkf BCA_STRVL : 339- 345: lfayg Dah-Ry--RV ginad CAT1_GOSHI : 55- 63: klanf Dre-RipeRV vharg CAT1_GOSHI : 350- 356: ifsys Dtq-Rh--RL gqtyl CAT1_LYCES : 350- 356: ifaya Dtq-Rh--RI gpnym CAT1_MAIZE : 55- 63: klaqf Dre-RipeRV vharg CAT1_MAIZE : 350- 356: ifsya Dtq-Rh--RL gpnyl CAT2_GOSHI : 55- 63: klanf Dre-RipeRV vharg CAT2_GOSHI : 350- 356: ifsys Dtq-Rh--RL gpnyl CAT2_MAIZE : 54- 62: klanf Dre-RipeRV vharg CAT2_MAIZE : 349- 355: ifsys Dtq-Rh--RL gpnyl CAT3_MAIZE : 57- 65: kvahf Dre-RipeRV vharg CAT3_MAIZE : 352- 358: vfaya Dtq-Ry--RL gpnyl CATA_ARATH : 55- 63: klanf Dre-RipeRV vharg CATA_ARATH : 350- 356: vfsya Dtq-Rh--RL gpnyl CATA_BOVIN : 64- 72: emahf Dre-RipeRV vhakg CATA_BOVIN : 123- 130: esgsa Dtv-Rdp-RG favkf CATA_BOVIN : 359- 365: lfayp Dth-Rh--RL gpnyl CATA_CANTR : 42- 50: slahf Dre-RipeRV vhakg CATA_CANTR : 101- 108: elgsa Dta-Rdp-RG fatkf CATA_CANTR : 337- 343: lfsya Dth-Rh--RL gtnyt CATA_DROME : 63- 71: emshf Dre-RipeRV vhakg CATA_DROME : 122- 129: esgsa Dta-Rdp-RG favkf CATA_DROME : 358- 364: lfsys Dth-Rh--RL gpnyl CATA_HAEIN : 112- 119: ergaa Dae-Rdi-RG falkf CATA_HAEIN : 348- 354: lfnya Daq-Ry--RL gvnyr CATA_HANPO : 55- 63: tlshf Dre-RipeRV vhakg CATA_HANPO : 114- 121: ekgsa Dta-Rdp-RG fatkf CATA_HANPO : 350- 356: lfsyp Dth-Rh--RL gpnyh CATA_HELAN : 55- 63: klanf Dre-RipeRV vharg CATA_HELAN : 350- 356: ifsys Dtq-Rh--RL gpnyl CATA_HELAN : 441- 450: rsfsp DrqeRfinRV vggls CATA_HUMAN : 65- 73: emahf Dre-RipeRV vhakg CATA_HUMAN : 124- 131: esgsa Dtv-Rdp-RG favkf CATA_HUMAN : 360- 366: lfayp Dth-Rh--RL gpnyl CATA_IPOBA : 350- 356: vfaya Dth-Rh--RL gpnym CATA_LACSK : 102- 109: eagyp Dty-Rdv-RG favkf CATA_LACSK : 338- 344: lfgyk Dae-Ry--RL ganye CATA_LISSE : 45- 53: klahf Dre-RvpeRV vharg CATA_LISSE : 340- 346: lfsys Dtq-Rh--RV gpnyl CATA_MICLU : 103- 110: engsp Dtw-Rdt-RG falrf CATA_MOUSE : 65- 73: emahf Dre-RipeRV vhakg CATA_MOUSE : 124- 131: esgsa Dtv-Rdp-RG favkf CATA_MOUSE : 360- 366: lfayp Dth-Rh--RL gpnyl CATA_ORYSA : 350- 356: vfaya Dtq-Ry--RL gpnyl CATA_PEA : 55- 63: klaqf Dre-RipeRV vharg CATA_PEA : 350- 356: vfsya Dsq-Rh--RL gpnyl CATA_PEA : 398- 406: fpsrh Dtv-RhaeRV piptt CATA_PENJA : 45- 53: disew DevfRfd-RL eaver CATA_PHAAU : 55- 63: klanf Dre-RipeRV vharg CATA_PHAAU : 350- 356: ifsya Dsq-Rh--RL gpnyl CATA_PROMI : 103- 110: ergaa Dae-Rdi-RG falkf CATA_PROMI : 339- 345: lfsyg Dah-Ry--RL gvnhh CATA_PROMI : 432- 441: ellsd DehqRmfaRI agels CATA_RAT : 65- 73: emahf Dre-RipeRV vhakg CATA_RAT : 124- 131: esgsa Dtv-Rdp-RG favkf CATA_RAT : 360- 366: lfayp Dth-Rh--RL gpnyl CATA_RICCO : 39- 48: rswpp DrqeRslnRL vggfs CATA_SOYBN : 55- 63: klanf Dre-RipeRV vharg CATA_SOYBN : 350- 356: vfsya Dtq-Rh--RL gpnyl CATA_YEAST : 119- 126: dkgsa Dtv-Rdp-RG fatkf CATA_YEAST : 357- 363: lfsya Dah-Ry--RL gpnfh CATB_BACFR : 103- 110: ergaa Dae-Rdi-RG famkf CATB_BACFR : 339- 345: lfsyg Daq-Ry--RL gvnse CATB_BACSU : 68- 76: kmthf Dhe-RipeRV vharg CATB_BACSU : 127- 134: skgsa Dtv-Rda-RG fatkf CATE_ECOLI : 118- 126: kithf Dhe-RipeRI vharg CATE_ECOLI : 177- 184: gagsa Dtv-Rdi-RG fatkf CATF_PSESY : 68- 76: klqrf Dre-RipeRV vharg CATT_YEAST : 54- 62: niasf Dre-RvpeRV vhakg CATT_YEAST : 113- 120: esgtp Dta-Rdp-RG vsfkf CATT_YEAST : 353- 359: lfsyp Dtq-Rh--RL ganyq CATV_BACSU : 103- 110: elgsa Dtv-Rdp-RG favkf CATV_BACSU : 339- 345: lfayh Dah-Ry--RV ganhq CAT_BACFI : 65- 73: kmthf Dhe-RipeRI vharg D 4: 13.1632 46( 36) N-x(0,2)-N-x(2)-[ADENQS]-x(2)-E Occurences: 46(36) BCA_STRVL : 300- 309: lelnr NpeNifAevE qsifs CAT1_GOSHI : 311- 320: lvlnk NidNffAenE qlafc CAT1_GOSHI : 426- 433: iieke N--NfkQpgE ryrsw CAT1_LYCES : 311- 320: lvlnr NidNffAenE qlafn CAT1_LYCES : 426- 433: vipke N--NfkQagE ryrsw CAT1_MAIZE : 311- 320: mvlnk NvdNffAenE qiafc CAT1_MAIZE : 426- 433: iiqke N--NfkQagE ryrsf CAT2_GOSHI : 311- 320: mvlnk NidNffAenE qlafc CAT2_GOSHI : 426- 433: iigke N--NfkQpgE ryrsf CAT2_MAIZE : 310- 319: lvlnr NidNffAenE qlafc CAT2_MAIZE : 425- 432: viske N--NfkQpgE ryram CAT3_MAIZE : 313- 322: lvldr NvdNflNenE qlafg CATA_ARATH : 311- 320: mvlnk NidNffAenE qlafc CATA_ARATH : 426- 433: iieke N--NfkEpgE ryrtf CATA_BOVIN : 320- 329: lvlnr NpvNyfAevE qlafd CATA_CANTR : 298- 307: ftlne NpkNyfAevE qaafs CATA_DROME : 319- 328: mvldr NpkNyfAevE qiafs CATA_HAEIN : 309- 318: felnr NpeNffAdvE qsafa CATA_HANPO : 311- 320: ftlne NpkNyyAetE qiafs CATA_HELAN : 311- 320: lvlnk NidNffAenE qlafc CATA_HELAN : 426- 433: vieke N--NfkQpgE ryrsf CATA_HUMAN : 321- 330: lvlnr NpvNyfAevE qiafd CATA_IPOBA : 311- 320: mvlnk NidNffAenE mlamd CATA_LACSK : 302- 309: denpt N--NfeDiqE lafsp CATA_LISSE : 301- 310: mtlnr NpdNifAetE svgfn CATA_MICLU : 300- 309: ntlnr NpkNffAeiE saafs CATA_MOUSE : 321- 330: lvlnk NpvNyfAevE qmafd CATA_ORYSA : 311- 320: lvlnr NvdNffNenE qlafg CATA_PEA : 311- 320: mvlnk NidNffAenE qlafc CATA_PENJA : 309- 318: lllnr NplNmfAevE qvfmd CATA_PHAAU : 311- 320: lvlnk NidNffAenE qlafc CATA_PHAAU : 426- 433: aieke N--NfkQagE rfrsw CATA_PROMI : 300- 309: felnr NpdNyfSdvE qaafs CATA_RAT : 321- 330: lvlnr NpaNyfAevE qmafd CATA_RICCO : 24- 31: vieke N--NfkQpgE ryrsw CATA_SOYBN : 311- 320: mvlnk NidNffAenE qlafc CATA_SOYBN : 426- 433: mieke N--NfkQpgE ryrsw CATA_YEAST : 9- 18: lgqek NevNysDvrE drvvt CATA_YEAST : 318- 327: ivlne NplNffAqvE qaafa CATB_BACFR : 300- 309: lelnr NpeNyfAevE qsafn CATB_BACSU : 328- 337: mtlnr NqdNvfAetE qvafh CATE_ECOLI : 378- 387: mvlnr NpdNffAenE qaafh CATF_PSESY : 321- 330: mvlnk NvdNffQetE qvama CATT_YEAST : 313- 322: itlte NvdNyfQeiE qvafs CATV_BACSU : 300- 309: mvldr NpeNyfAevE qatfs CAT_BACFI : 325- 334: mtlnr NvdNvfAetE qvafh E 5: 11.5102 60( 36) V-x(0,1)-G-x(2,3)-S Occurences: 60(36) BCA_STRVL : 319- 325: spahf VpGigpS pdkml CAT1_GOSHI : 243- 249: deaik VgGanhS hatqd CAT1_GOSHI : 330- 336: cpaiv VpGiyyS ddkll CAT1_LYCES : 243- 249: eeair VgGtnhS hatkd CAT1_LYCES : 330- 336: npghi VpGiyyS edkll CAT1_MAIZE : 243- 249: neavt VgGtchS hatkd CAT2_GOSHI : 243- 249: deair VgGanhS hatqd CAT2_GOSHI : 330- 336: cpsli VpGiyyS ddkll CAT2_MAIZE : 329- 335: cpgli VpGiyyS ddkll CAT3_MAIZE : 195- 199: flfdh V-Gvp-S dyrhm CAT3_MAIZE : 245- 251: deear VgGrnhS htqdl CAT3_MAIZE : 332- 338: gpglv VpGiyyS ddkml CATA_ARATH : 330- 336: cpaii VpGihyS ddkll CATA_BOVIN : 115- 121: vrfst VaGesgS adtvr CATA_CANTR : 93- 99: trfst VgGelgS adtar CATA_DROME : 114- 118: vrfst V-Gge-S gsadt CATA_DROME : 114- 120: vrfst VgGesgS adtar CATA_DROME : 338- 344: spahl VpGvepS pdkml CATA_HAEIN : 328- 334: apsnl VpGigaS pdrml CATA_HAEIN : 381- 387: dgqgr VdGnygS lphye CATA_HANPO : 106- 112: trfst VgGekgS adtar CATA_HANPO : 330- 336: spsht VpGmepS ndpvl CATA_HELAN : 330- 336: cpaii VpGiyyS ddkll CATA_HELAN : 450- 455: rfinr VvGgl-S dprvt CATA_HELAN : 451- 455: finrv V-Ggl-S dprvt CATA_HUMAN : 116- 122: vrfst VaGesgS adtvr CATA_IPOBA : 330- 336: dpahi VpGiyfS ddkml CATA_LACSK : 318- 324: spanl VpGieaS pdkll CATA_LISSE : 320- 326: npgvl VpGmlpS edrvl CATA_MICLU : 95- 101: lrfst VaGengS pdtwr CATA_MICLU : 319- 325: spsnt VpGiglS pdrml CATA_MOUSE : 116- 122: vrfst VaGesgS adtvr CATA_ORYSA : 243- 249: deatl VgGknhS hatqd CATA_ORYSA : 330- 336: gpglv VpGiyyS ddkml CATA_PEA : 243- 249: eeaiq VgGsnhS hatkd CATA_PENJA : 101- 107: aafst VaGakgS atvrd CATA_PENJA : 130- 134: alqel V-Gnn-S pisff CATA_PHAAU : 243- 249: eeaik VgGanhS hatqd CATA_PHAAU : 330- 336: cpaii VpGvyyS ddkml CATA_PROMI : 191- 196: lsyrf VhGfg-S htysf CATA_PROMI : 319- 325: spani VpGisfS pdkml CATA_RAT : 116- 122: vrfst VaGesgS adtvr CATA_RICCO : 49- 53: slnrl V-Ggf-S eprit CATA_SOYBN : 243- 249: deair VgGsnhS hatqd CATA_SOYBN : 330- 336: cpaii VpGvyyS ddkll CATA_YEAST : 111- 117: trfst VgGdkgS adtvr CATA_YEAST : 392- 398: dgpmn VnGnfgS eptyl CATB_BACFR : 319- 325: npmni VeGigfS pdkml CATB_BACFR : 372- 378: dgamr VdGnygS akgye CATB_BACSU : 119- 125: vrfst VaGskgS adtvr CATB_BACSU : 246- 251: fhwkp VlGvh-S lvwde CATB_BACSU : 479- 484: afcfe V-GkvkS kdvqr CATE_ECOLI : 169- 175: vrfst VqGgagS adtvr CATF_PSESY : 119- 124: rfssv VhGnh-S petlr CATF_PSESY : 340- 346: apanl VpGiepS edrll CATT_YEAST : 105- 109: vrfst V-Gge-S gtpdt CATV_BACSU : 95- 101: irfst VaGelgS adtvr CATV_BACSU : 319- 325: spgtl VpGidvS pdkml CATV_BACSU : 403- 409: qaayp VqGiadS vsydh CAT_BACFI : 116- 122: vrfst VaGskgS aetvr CAT_BACFI : 243- 248: fhwkp VlGih-S lvwde F 6: 11.5102 63( 36) V-x(0,1)-G-x(2,3)-P Occurences: 63(36) BCA_STRVL : 125- 130: gnydl V-GnntP vffik BCA_STRVL : 319- 324: spahf VpGig-P spdkm CAT1_GOSHI : 136- 141: gnfdl V-GnnfP vffir CAT1_LYCES : 34- 39: vsslt V-GprgP vlled CAT1_LYCES : 136- 141: gnfdl V-GnnvP vffnr CAT1_MAIZE : 34- 39: nsalt V-GqrgP illed CAT1_MAIZE : 136- 141: gnfdl V-GnnmP vffir CAT2_GOSHI : 34- 39: nsslt V-GargP illed CAT2_GOSHI : 136- 141: gnfdl V-GnnfP vffir CAT2_MAIZE : 34- 39: dsslt V-GargP illed CAT2_MAIZE : 135- 140: gnwdl V-GnnfP vffir CAT3_MAIZE : 36- 41: nealt V-GprgP illed CATA_ARATH : 136- 141: gnfdl V-GnnfP vffir CATA_BOVIN : 43- 48: lnslt V-GprgP llvqd CATA_BOVIN : 145- 150: gnwdl V-GnntP iffir CATA_CANTR : 21- 26: fatqr V-GqhgP lllqd CATA_DROME : 42- 47: dasqt V-GprgP illqd CATA_DROME : 144- 149: gvwdl V-GnntP vffir CATA_DROME : 338- 343: spahl VpGve-P spdkm CATA_HAEIN : 134- 139: gnwdl V-GnntP vfflr CATA_HANPO : 330- 335: spsht VpGme-P sndpv CATA_HANPO : 445- 450: kmfwk VlGrt-P geqes CATA_HELAN : 34- 39: nnslt V-GsrgP illed CATA_HELAN : 136- 141: gnfdl V-GnnfP vffir CATA_HELAN : 451- 457: finrv VgGlsdP rvthe CATA_HUMAN : 44- 49: lnvit V-GprgP llvqd CATA_HUMAN : 146- 151: gnwdl V-GnntP iffir CATA_IPOBA : 34- 39: tcalt V-GsrgP illed CATA_IPOBA : 136- 141: gnwdl V-GnnfP vffir CATA_LACSK : 81- 86: avfsg V-GkktP litrf CATA_LACSK : 124- 129: gnydi V-GnntP vffvn CATA_LISSE : 126- 131: gnydf V-GnnlP vffir CATA_LISSE : 312- 316: aetes V-Gfn-P gvlvp CATA_LISSE : 320- 325: npgvl VpGml-P sedrv CATA_MICLU : 24- 29: reslt V-GsegP ivlhd CATA_MICLU : 125- 130: gnydl V-GnntP ifflr CATA_MOUSE : 146- 151: gnwdl V-GnntP iffir CATA_ORYSA : 34- 39: nealt V-GprgP illed CATA_PEA : 34- 39: nsslt V-GsrgP illed CATA_PEA : 136- 141: gnydl V-GnnfP vffvh CATA_PENJA : 130- 135: alqel V-GnnsP isffi CATA_PHAAU : 34- 39: nnslt V-GtrgP illed CATA_PHAAU : 136- 141: gnfdl V-GnnlP vffvr CATA_PROMI : 125- 130: gnwdm V-GnntP vfylr CATA_RAT : 146- 151: gnwdl V-GnntP iffir CATA_RICCO : 49- 55: slnrl VgGfseP ritqe CATA_SOYBN : 34- 39: nsslt V-GsrgP illed CATA_SOYBN : 136- 141: gnfdl V-GnnfP vffvr CATA_YEAST : 452- 457: rnlyr VlGkq-P gqqkn CATA_YEAST : 471- 476: nigih VeGac-P qiqqr CATB_BACFR : 125- 130: gnwdl V-GnntP vfflr CATB_BACSU : 149- 154: gnydl V-GnniP vffiq CATB_BACSU : 510- 515: eiakg V-GvaaP akrka CATE_ECOLI : 199- 204: gifdl V-GnntP iffiq CATF_PSESY : 119- 125: rfssv VhGnhsP etlrd CATF_PSESY : 148- 153: gnwdl V-GnnfP tffir CATF_PSESY : 340- 345: apanl VpGie-P sedrl CATF_PSESY : 503- 508: seqgq VpGck-P qglmi CATT_YEAST : 92- 97: apyqn V-GykcP glvrf CATT_YEAST : 474- 479: nqyyy VyGis-P ldfeq CATV_BACSU : 82- 87: aflse V-GkrtP lfirf CATV_BACSU : 125- 130: gnydi V-GnntP vffir CAT_BACFI : 146- 151: gnydl V-GnniP vffiq G 7: 11.5102 44( 36) N-N-x(1,3)-P Occurences: 44(36) BCA_STRVL : 127- 130: ydlvg NNt--P vffik CAT1_GOSHI : 138- 141: fdlvg NNf--P vffir CAT1_GOSHI : 426- 431: iieke NNfkqP geryr CAT1_LYCES : 138- 141: fdlvg NNv--P vffnr CAT1_MAIZE : 138- 141: fdlvg NNm--P vffir CAT2_GOSHI : 138- 141: fdlvg NNf--P vffir CAT2_GOSHI : 426- 431: iigke NNfkqP geryr CAT2_MAIZE : 137- 140: wdlvg NNf--P vffir CAT2_MAIZE : 425- 430: viske NNfkqP geryr CAT3_MAIZE : 140- 143: wdllg NNf--P vffir CATA_ARATH : 138- 141: fdlvg NNf--P vffir CATA_ARATH : 426- 431: iieke NNfkeP geryr CATA_BOVIN : 147- 150: wdlvg NNt--P iffir CATA_CANTR : 125- 128: ldlvy NNt--P vffir CATA_DROME : 146- 149: wdlvg NNt--P vffir CATA_HAEIN : 136- 139: wdlvg NNt--P vfflr CATA_HANPO : 138- 141: ldlvy NNt--P iffir CATA_HELAN : 138- 141: fdlvg NNf--P vffir CATA_HELAN : 426- 431: vieke NNfkqP geryr CATA_HUMAN : 148- 151: wdlvg NNt--P iffir CATA_IPOBA : 138- 141: wdlvg NNf--P vffir CATA_IPOBA : 426- 431: vieke NNfkqP gdryr CATA_LACSK : 126- 129: ydivg NNt--P vffvn CATA_LISSE : 128- 131: ydfvg NNl--P vffir CATA_MICLU : 127- 130: ydlvg NNt--P ifflr CATA_MOUSE : 148- 151: wdlvg NNt--P iffir CATA_ORYSA : 138- 141: wdllg NNf--P vffir CATA_PEA : 138- 141: ydlvg NNf--P vffvh CATA_PENJA : 132- 135: qelvg NNs--P isffi CATA_PHAAU : 138- 141: fdlvg NNl--P vffvr CATA_PROMI : 127- 130: wdmvg NNt--P vfylr CATA_RAT : 148- 151: wdlvg NNt--P iffir CATA_RICCO : 24- 29: vieke NNfkqP geryr CATA_SOYBN : 138- 141: fdlvg NNf--P vffvr CATA_SOYBN : 426- 431: mieke NNfkqP geryr CATA_YEAST : 143- 146: ldwvy NNt--P vffir CATB_BACFR : 127- 130: wdlvg NNt--P vfflr CATB_BACSU : 151- 154: ydlvg NNi--P vffiq CATB_BACSU : 417- 420: knslq NNd--P spata CATB_BACSU : 417- 422: knslq NNdpsP ataee CATE_ECOLI : 201- 204: fdlvg NNt--P iffiq CATF_PSESY : 150- 153: wdlvg NNf--P tffir CATT_YEAST : 137- 140: hdwvf NNt--P vfflr CATV_BACSU : 127- 130: ydivg NNt--P vffir CAT_BACFI : 148- 151: ydlvg NNi--P vffiq H 8: 11.0102 45( 36) R-x(2,4)-G-x(0,1)-G Occurences: 45(36) BCA_STRVL : 189- 195: ipasy Rhmn-GyG shtyq CAT1_GOSHI : 200- 206: vpqdy Rhme-GsG vntyt CAT1_LYCES : 200- 206: lptdy Rhme-GfG vhayq CAT1_MAIZE : 200- 206: iplny Rhme-GfG vntys CAT2_GOSHI : 200- 206: vpqdy Rhmd-GsG vhtyt CAT2_MAIZE : 199- 205: ipady Rhmd-GsG vhtyt CAT3_MAIZE : 202- 208: vpsdy Rhme-GfG vntyt CATA_ARATH : 200- 206: ipqdy Rhmd-GsG vntym CATA_BOVIN : 209- 215: ipdgh Rhmd-GyG shtfk CATA_CANTR : 89- 95: trift RfstvG-G elgsa CATA_DROME : 110- 116: tplav RfstvG-G esgsa CATA_HAEIN : 61- 68: viper RmhakGsG afgtf CATA_HAEIN : 198- 204: ipasy Rhmh-GfG shtys CATA_HANPO : 102- 108: trift RfstvG-G ekgsa CATA_HELAN : 200- 206: vpqdy Rhmd-GsG vntyt CATA_HELAN : 449- 453: erfin Rvv--G-G lsdpr CATA_HUMAN : 210- 216: ipdgh Rhmn-GyG shtfk CATA_IPOBA : 200- 206: iptdy Rhme-GfG vhtft CATA_LACSK : 188- 194: ipasy Rmmh-GfG shtfk CATA_LISSE : 471- 477: pefae Rvaa-GtG inlae CATA_MICLU : 53- 60: niper RphakGsG afgvf CATA_MICLU : 189- 195: lprtw Remd-GyG shtyl CATA_MICLU : 480- 485: qntvk Rks--GnG ipgve CATA_MOUSE : 210- 216: ipdgh Rhmn-GyG shtfk CATA_ORYSA : 200- 206: iptdy Rhmd-GfG vntyt CATA_PEA : 200- 206: vpqdy Rhmd-GfG vntyt CATA_PENJA : 198- 204: avaah Rhmn-GyG shtfk CATA_PHAAU : 200- 206: vpqdy Rhmd-GfG vntyt CATA_PROMI : 52- 59: viper RmhakGsG afgtf CATA_PROMI : 189- 195: lplsy Rfvh-GfG shtys CATA_RAT : 210- 216: ipdgh Rhmn-GyG shtfk CATA_RICCO : 47- 51: ersln Rlv--G-G fsepr CATA_SOYBN : 200- 206: ipqdy Rhmd-GfG vntyt CATA_SOYBN : 411- 415: vpvpp Ril--G-G krekc CATA_YEAST : 107- 113: tkclt RfstvG-G dkgsa CATB_BACFR : 52- 59: viper RmhakGsG aygtf CATB_BACFR : 189- 195: ipasy Rhmh-GfG shtys CATB_BACSU : 217- 223: iprsy Rmme-GfG vhtfr CATE_ECOLI : 267- 273: iprsy Rtme-GfG ihtfr CATF_PSESY : 212- 218: hpssy Rfmd-GnG vhayk CATT_YEAST : 101- 107: cpglv RfstvG-G esgtp CATV_BACSU : 189- 195: ipatl Rhmh-GfG shtfk CATV_BACSU : 371- 377: rdgqm RfddnG-G gsvyy CATV_BACSU : 371- 378: rdgqm RfddnGgG svyye CATV_BACSU : 470- 476: peygk Rvae-GlG lpikk CAT_BACFI : 214- 220: iprsf Rmme-GfG vhtfr I 9: 11.0102 68( 36) R-x(3,5)-G-x(0,1)-S Occurences: 68(36) BCA_STRVL : 91- 98: tetfl RfstvaG-S lgaad BCA_STRVL : 149- 155: ihtqk Rdpyt-G-S qeadn BCA_STRVL : 189- 196: ipasy RhmngyG-S htyqw CAT1_GOSHI : 62- 70: eripe RvvharGaS akgff CAT1_GOSHI : 200- 205: vpqdy Rhme--G-S gvnty CAT1_LYCES : 62- 70: ekipe RvvharGaS akgff CAT1_MAIZE : 7- 12: dpykh Rpss--G-S nssfw CAT1_MAIZE : 62- 70: eripe RvvharGaS akgff CAT2_GOSHI : 62- 70: eripe RvvharGaS akgff CAT2_GOSHI : 200- 205: vpqdy Rhmd--G-S gvhty CAT2_MAIZE : 61- 69: eripe RvvharGaS akgff CAT2_MAIZE : 199- 204: ipady Rhmd--G-S gvhty CAT3_MAIZE : 64- 72: eripe RvvharGaS akgff CATA_ARATH : 62- 70: eripe RvvharGaS akgff CATA_ARATH : 200- 205: ipqdy Rhmd--G-S gvnty CATA_BOVIN : 111- 119: tpiav RfstvaGeS gsadt CATA_BOVIN : 209- 216: ipdgh RhmdgyG-S htfkl CATA_CANTR : 49- 56: eripe RvvhakG-S gaygv CATA_CANTR : 187- 193: tpasy Remn--GyS ghtyk CATA_DROME : 110- 118: tplav RfstvgGeS gsadt CATA_HAEIN : 60- 67: evipe RrmhakG-S gafgt CATA_HAEIN : 61- 67: viper Rmhak-G-S gafgt CATA_HAEIN : 198- 205: ipasy RhmhgfG-S htysf CATA_HAEIN : 380- 387: rdgqg RvdgnyG-S lphye CATA_HANPO : 200- 206: tpasy Rtmn--GyS ghtyk CATA_HELAN : 62- 70: eripe RvvharGaS akgff CATA_HELAN : 200- 205: vpqdy Rhmd--G-S gvnty CATA_HELAN : 449- 455: erfin Rvvg--GlS dprvt CATA_HUMAN : 112- 120: tpiav RfstvaGeS gsadt CATA_HUMAN : 210- 217: ipdgh RhmngyG-S htfkl CATA_IPOBA : 62- 70: eripe RvvharGaS akgff CATA_LACSK : 188- 195: ipasy RmmhgfG-S htfkw CATA_LISSE : 107- 113: spetl Rdpr--GfS vkfyt CATA_LISSE : 190- 195: tpasy Reir--G-S svhaf CATA_LISSE : 190- 196: tpasy Reir--GsS vhafk CATA_MICLU : 19- 26: pavsd ResltvG-S egpiv CATA_MICLU : 52- 59: mnipe RrphakG-S gafgv CATA_MICLU : 53- 59: niper Rphak-G-S gafgv CATA_MICLU : 189- 196: lprtw RemdgyG-S htylw CATA_MOUSE : 112- 120: tpiav RfstvaGeS gsadt CATA_MOUSE : 210- 217: ipdgh RhmngyG-S htfkl CATA_ORYSA : 62- 70: eripe RvvharGaS akgff CATA_PEA : 62- 70: eripe RvvharGaS akgff CATA_PENJA : 198- 205: avaah RhmngyG-S htfkl CATA_PENJA : 483- 490: aaaaa RiaaavG-S aaaga CATA_PHAAU : 62- 70: eripe RvvharGaS akgff CATA_PROMI : 51- 58: evipe RrmhakG-S gafgt CATA_PROMI : 52- 58: viper Rmhak-G-S gafgt CATA_PROMI : 189- 196: lplsy RfvhgfG-S htysf CATA_RAT : 112- 120: tpiav RfstvaGeS gsadt CATA_RAT : 210- 217: ipdgh RhmngyG-S htfkl CATA_RICCO : 47- 53: ersln Rlvg--GfS eprit CATA_SOYBN : 62- 70: eripe RvvharGaS akgff CATA_YEAST : 67- 74: enipq RnphahG-S gafgy CATA_YEAST : 207- 213: tpany Rsmh--GyS ghtyk CATA_YEAST : 488- 494: ydmfa Rvdk--GlS eaikk CATB_BACFR : 51- 58: evipe RrmhakG-S gaygt CATB_BACFR : 52- 58: viper Rmhak-G-S gaygt CATB_BACFR : 189- 196: ipasy RhmhgfG-S htysf CATB_BACFR : 371- 378: rdgam RvdgnyG-S akgye CATB_BACSU : 115- 122: tpvfv RfstvaG-S kgsad CATE_ECOLI : 125- 132: eripe RivharG-S aahgy CATE_ECOLI : 521- 528: tpfeq Rhivd-GfS felsk CATF_PSESY : 365- 372: dtqmy Rlgai-GlS lpvnq CATT_YEAST : 101- 109: cpglv RfstvgGeS gtpdt CATT_YEAST : 116- 122: tpdta Rdpr--GvS fkfyt CATV_BACSU : 189- 196: ipatl RhmhgfG-S htfkw CATV_BACSU : 371- 379: rdgqm RfddngGgS vyyep CAT_BACFI : 112- 119: tpvfv RfstvaG-S kgsae J 10: 11.0102 71( 36) D-x(0,2)-R-x(2,3)-R Occurences: 71(36) BCA_STRVL : 69- 75: ftltr DvsRwt-R aafls BCA_STRVL : 103- 109: slgaa DavRdp-R gwalk CAT1_GOSHI : 55- 62: klanf DreRipeR vvhar CAT1_GOSHI : 441- 445: rswaa D--Rqe-R ficrw CAT1_LYCES : 441- 445: rswep D--Rqd-R yinkw CAT1_MAIZE : 55- 62: klaqf DreRipeR vvhar CAT1_MAIZE : 439- 445: ryrsf DpaRqd-R fiqrw CAT1_MAIZE : 444- 449: dparq D--RfiqR wvdal CAT2_GOSHI : 55- 62: klanf DreRipeR vvhar CAT2_GOSHI : 441- 445: rsfsa D--Rqe-R finrw CAT2_MAIZE : 54- 61: klanf DreRipeR vvhar CAT2_MAIZE : 397- 404: fpsry DavRnapR ypipt CAT2_MAIZE : 438- 444: ryram DpaRqe-R fitrw CAT3_MAIZE : 57- 64: kvahf DreRipeR vvhar CAT3_MAIZE : 442- 448: ryrsw DadRqd-R fvkai CAT3_MAIZE : 444- 448: rswda D--Rqd-R fvkai CATA_ARATH : 55- 62: klanf DreRipeR vvhar CATA_BOVIN : 64- 71: emahf DreRipeR vvhak CATA_BOVIN : 123- 129: esgsa DtvRdp-R gfavk CATA_CANTR : 42- 49: slahf DreRipeR vvhak CATA_CANTR : 101- 107: elgsa DtaRdp-R gfatk CATA_DROME : 63- 70: emshf DreRipeR vvhak CATA_DROME : 122- 128: esgsa DtaRdp-R gfavk CATA_HAEIN : 112- 118: ergaa DaeRdi-R gfalk CATA_HAEIN : 159- 165: kavkr Dp-RtnmR satnn CATA_HANPO : 55- 62: tlshf DreRipeR vvhak CATA_HANPO : 114- 120: ekgsa DtaRdp-R gfatk CATA_HELAN : 55- 62: klanf DreRipeR vvhar CATA_HELAN : 441- 445: rsfsp D--Rqe-R finrv CATA_HUMAN : 65- 72: emahf DreRipeR vvhak CATA_HUMAN : 124- 130: esgsa DtvRdp-R gfavk CATA_IPOBA : 398- 405: fpskf DntRnaeR fptpl CATA_IPOBA : 441- 445: rswap D--Rqd-R finrw CATA_IPOBA : 444- 449: apdrq D--RfinR wvkal CATA_LACSK : 102- 108: eagyp DtyRdv-R gfavk CATA_LACSK : 149- 155: hsqkr Dp-RthaR sqdmq CATA_LISSE : 45- 52: klahf DreRvpeR vvhar CATA_MICLU : 103- 109: engsp DtwRdt-R gfalr CATA_MOUSE : 65- 72: emahf DreRipeR vvhak CATA_MOUSE : 124- 130: esgsa DtvRdp-R gfavk CATA_ORYSA : 441- 445: rswap D--Rqe-R fiavr CATA_PEA : 55- 62: klaqf DreRipeR vvhar CATA_PEA : 398- 405: fpsrh DtvRhaeR vpipt CATA_PEA : 441- 445: rtwap D--Rqe-R flrrw CATA_PENJA : 429- 435: avvea Dq-RkqsR qfwas CATA_PHAAU : 55- 62: klanf DreRipeR vvhar CATA_PHAAU : 441- 445: rswap D--Rqd-R firrw CATA_PHAAU : 444- 448: apdrq D--Rfi-R rwvda CATA_PHAAU : 444- 449: apdrq D--RfirR wvdal CATA_PROMI : 103- 109: ergaa DaeRdi-R gfalk CATA_PROMI : 150- 156: hivkr Dp-RtnmR nmayk CATA_RAT : 65- 72: emahf DreRipeR vvhak CATA_RAT : 124- 130: esgsa DtvRdp-R gfavk CATA_RICCO : 39- 43: rswpp D--Rqe-R slnrl CATA_SOYBN : 55- 62: klanf DreRipeR vvhar CATA_SOYBN : 441- 445: rswps D--Rqe-R fvrrw CATA_YEAST : 15- 20: evnys Dv-Red-R vvtns CATA_YEAST : 119- 125: dkgsa DtvRdp-R gfatk CATB_BACFR : 103- 109: ergaa DaeRdi-R gfamk CATB_BACFR : 150- 156: havkr Dp-RnnmR sannn CATB_BACSU : 68- 75: kmthf DheRipeR vvhar CATB_BACSU : 127- 133: skgsa DtvRda-R gfatk CATB_BACSU : 209- 214: mwtms D--RgipR syrmm CATE_ECOLI : 118- 125: kithf DheRipeR ivhar CATE_ECOLI : 177- 183: gagsa DtvRdi-R gfatk CATE_ECOLI : 259- 264: mwams D--RgipR syrtm CATF_PSESY : 68- 75: klqrf DreRipeR vvhar CATT_YEAST : 54- 61: niasf DreRvpeR vvhak CATT_YEAST : 113- 119: esgtp DtaRdp-R gvsfk CATV_BACSU : 103- 109: elgsa DtvRdp-R gfavk CAT_BACFI : 65- 72: kmthf DheRipeR ivhar CAT_BACFI : 206- 211: mwams D--RsipR sfrmm K 11: 11.0102 49( 36) D-x(1,3)-R-x(1,2)-L Occurences: 49(36) BCA_STRVL : 238- 244: agedp DshqRd-L reaie CAT1_GOSHI : 350- 356: ifsys Dtq-RhrL gqtyl CAT1_LYCES : 153- 158: aksfp Dti-Ra-L kpnpk CAT1_MAIZE : 350- 356: ifsya Dtq-RhrL gpnyl CAT2_GOSHI : 350- 356: ifsys Dtq-RhrL gpnyl CAT2_MAIZE : 167- 172: rthiq Dnw-Ri-L dffsh CAT2_MAIZE : 349- 355: ifsys Dtq-RhrL gpnyl CAT3_MAIZE : 352- 358: vfaya Dtq-RyrL gpnyl CATA_ARATH : 350- 356: vfsya Dtq-RhrL gpnyl CATA_BOVIN : 258- 264: ahedp DyglRd-L fnaia CATA_BOVIN : 359- 365: lfayp Dth-RhrL gpnyl CATA_CANTR : 337- 343: lfsya Dth-RhrL gtnyt CATA_DROME : 257- 263: astdp DysiRd-L ynrik CATA_DROME : 358- 364: lfsys Dth-RhrL gpnyl CATA_DROME : 489- 494: tqvha Dfg-Rm-L teeln CATA_HAEIN : 348- 354: lfnya Daq-RyrL gvnyr CATA_HANPO : 249- 255: agedp DhstRd-L weaie CATA_HANPO : 350- 356: lfsyp Dth-RhrL gpnyh CATA_HELAN : 350- 356: ifsys Dtq-RhrL gpnyl CATA_HUMAN : 259- 265: sqedp DygiRd-L fnaia CATA_HUMAN : 360- 366: lfayp Dth-RhrL gpnyl CATA_IPOBA : 350- 356: vfaya Dth-RhrL gpnym CATA_LACSK : 338- 344: lfgyk Dae-RyrL ganye CATA_LISSE : 3- 7: mt Dr--Rn-L ttnqg CATA_LISSE : 432- 438: wkrys Dae-RaaL vkniv CATA_LISSE : 452- 458: egvre DikiRn-L rnfyq CATA_MICLU : 238- 244: agena Dfh-RqdL fevia CATA_MOUSE : 259- 265: aqedp DyglRd-L fnaia CATA_MOUSE : 360- 366: lfayp Dth-RhrL gpnyl CATA_ORYSA : 350- 356: vfaya Dtq-RyrL gpnyl CATA_PEA : 350- 356: vfsya Dsq-RhrL gpnyl CATA_PEA : 441- 447: rtwap DrqeRf-L rrwve CATA_PENJA : 247- 252: aaedv Dyf-Rd-L nfqae CATA_PHAAU : 350- 356: ifsya Dsq-RhrL gpnyl CATA_PROMI : 178- 184: hqlti DmsdRg-L plsyr CATA_PROMI : 252- 258: aierg Dyp-RwkL qiqim CATA_PROMI : 339- 345: lfsyg Dah-RyrL gvnhh CATA_RAT : 259- 265: aqedp DyglRd-L fnaia CATA_RAT : 360- 366: lfayp Dth-RhrL gpnyl CATA_RICCO : 39- 45: rswpp DrqeRs-L nrlvg CATA_SOYBN : 350- 356: vfsya Dtq-RhrL gpnyl CATA_YEAST : 357- 363: lfsya Dah-RyrL gpnfh CATB_BACFR : 339- 345: lfsyg Daq-RyrL gvnse CATB_BACSU : 266- 272: agkdp DfhrRd-L wetie CATB_BACSU : 266- 272: agkdp Dfh-RrdL wetie CATE_ECOLI : 316- 322: tgrdp DfhrRe-L weaie CATE_ECOLI : 316- 322: tgrdp Dfh-RreL weaie CATF_PSESY : 173- 178: hafkp Dp--RtnL dndsr CATT_YEAST : 353- 359: lfsyp Dtq-RhrL ganyq CATV_BACSU : 431- 436: rlmse De--RtrL veniv CAT_BACFI : 263- 269: agkdp DfhrRd-L wesie CAT_BACFI : 263- 269: agkdp Dfh-RrdL wesie L 12: 11.0102 69( 36) E-x(2,3)-F-x(1,3)-P Occurences: 69(36) BCA_STRVL : 309- 315: ifaev EqsiFs--P ahfvp BCA_STRVL : 383- 390: gakny EpnsFgg-P vqtdr CAT1_GOSHI : 279- 286: idpdh Edk-FdfdP ldvtk CAT1_GOSHI : 320- 326: ffaen EqlaFc--P aivvp CAT1_GOSHI : 425- 431: ciiek Enn-Fkq-P geryr CAT1_LYCES : 320- 326: ffaen EqlaFn--P ghivp CAT1_MAIZE : 279- 286: idldh Edk-FdfdP ldvtk CAT1_MAIZE : 320- 326: ffaen EqiaFc--P aisvp CAT2_GOSHI : 279- 286: mdplh Edr-FdfdP ldvtk CAT2_GOSHI : 295- 302: tktwp Edi-FplqP mgrmv CAT2_GOSHI : 320- 326: ffaen EqlaFc--P slivp CAT2_GOSHI : 425- 431: ciigk Enn-Fkq-P geryr CAT2_MAIZE : 294- 301: tktwp Edt-FplqP vgrlv CAT2_MAIZE : 319- 325: ffaen EqlaFc--P glivp CAT2_MAIZE : 424- 430: tvisk Enn-Fkq-P geryr CAT3_MAIZE : 282- 288: dpaqq EqydFd--P lddtk CAT3_MAIZE : 322- 328: flnen EqlaFg--P glvvp CATA_ARATH : 279- 286: idpad Edk-FdfdP ldvtk CATA_ARATH : 320- 326: ffaen EqlaFc--P aiivp CATA_ARATH : 425- 431: ciiek Enn-Fke-P geryr CATA_BOVIN : 287- 295: vmtfs EaeiFpfnP fdltk CATA_BOVIN : 289- 295: tfsea EifpFn--P fdltk CATA_BOVIN : 329- 335: yfaev EqlaFd--P snmpp CATA_CANTR : 307- 313: yfaev EqaaFs--P ahtvp CATA_DROME : 328- 334: yfaev EqiaFs--P ahlvp CATA_HAEIN : 318- 324: ffadv EqsaFa--P snlvp CATA_HANPO : 320- 326: yyaet EqiaFs--P shtvp CATA_HELAN : 295- 302: tktwp Edi-FplqP vgrlv CATA_HELAN : 320- 326: ffaen EqlaFc--P aiivp CATA_HELAN : 425- 431: cviek Enn-Fkq-P geryr CATA_HUMAN : 290- 296: tfnqa EtfpFn--P fdltk CATA_HUMAN : 330- 336: yfaev EqiaFd--P snmpp CATA_IPOBA : 279- 286: mdpdh Edr-FdfdP ldttk CATA_IPOBA : 425- 431: cviek Enn-Fkq-P gdryr CATA_LACSK : 309- 314: fediq Ela-Fs--P anlvp CATA_LISSE : 310- 316: ifaet EsvgFn--P gvlvp CATA_MICLU : 309- 315: ffaei EsaaFs--P sntvp CATA_MOUSE : 288- 296: vmtfk EaetFpfnP fdltk CATA_MOUSE : 290- 296: tfkea EtfpFn--P fdltk CATA_MOUSE : 330- 336: yfaev EqmaFd--P snmpp CATA_ORYSA : 278- 286: vidpe EeerFdfdP lddtk CATA_ORYSA : 279- 286: idpee Eer-FdfdP lddtk CATA_ORYSA : 280- 286: dpeee ErfdFd--P lddtk CATA_ORYSA : 320- 326: ffnen EqlaFg--P glvvp CATA_PEA : 279- 286: idpah Edr-FefdP ldvtk CATA_PEA : 320- 326: ffaen EqlaFc--P aimlp CATA_PENJA : 171- 178: aelaa Esl-FvrlP slhqv CATA_PHAAU : 279- 286: idpeh Edk-FdfdP ldvtk CATA_PHAAU : 320- 326: ffaen EqlaFc--P aiivp CATA_PROMI : 309- 315: yfsdv EqaaFs--P anivp CATA_PROMI : 392- 399: ggvfq EqpdFke-P plsie CATA_PROMI : 392- 400: ggvfq EqpdFkepP lsieg CATA_PROMI : 416- 422: nhred Edy-Fsq-P ralye CATA_RAT : 288- 296: vmtfk EaetFpfnP fdltk CATA_RAT : 290- 296: tfkea EtfpFn--P fdltk CATA_RAT : 330- 336: yfaev EqmaFd--P snmpp CATA_RICCO : 23- 29: cviek Enn-Fkq-P geryr CATA_SOYBN : 320- 326: ffaen EqlaFc--P aiivp CATA_SOYBN : 425- 431: cmiek Enn-Fkq-P geryr CATA_YEAST : 327- 333: ffaqv EqaaFa--P sttvp CATB_BACFR : 309- 315: yfaev EqsaFn--P mnive CATB_BACFR : 320- 326: pmniv EgigFs--P dkmlq CATB_BACSU : 337- 343: vfaet EqvaFh--P gnvvp CATE_ECOLI : 335- 342: dfpey Elg-FqliP eedef CATE_ECOLI : 387- 393: ffaen EqaaFh--P ghivp CATF_PSESY : 290- 298: vlkpe ElakFdfdP ldatk CATT_YEAST : 322- 328: yfqei EqvaFs--P tntci CATV_BACSU : 309- 315: yfaev EqatFs--P gtlvp CATV_BACSU : 383- 390: gsvyy EpnsFgg-P kespe CAT_BACFI : 334- 340: vfaet EqvaFh--P ghvvp M 13: 11.0102 66( 36) E-x(3,5)-V-x(2,3)-A Occurences: 66(36) BCA_STRVL : 46- 55: ahfnr EriperVvh-A rgaga CAT1_GOSHI : 43- 52: gqyll Edyhl-VeklA nfdre CAT1_GOSHI : 57- 66: anfdr EriperVvh-A rgasa CAT1_GOSHI : 237- 246: vkcll EdeaikVgg-A nhsha CAT1_GOSHI : 239- 246: clled Eaik--Vgg-A nhsha CAT1_LYCES : 57- 66: atfdr EkiperVvh-A rgasa CAT1_MAIZE : 57- 66: aqfdr EriperVvh-A rgasa CAT2_GOSHI : 43- 52: gpill Edyhl-VeklA nfdre CAT2_GOSHI : 57- 66: anfdr EriperVvh-A rgasa CAT2_GOSHI : 237- 246: vksll EdeairVgg-A nhsha CAT2_GOSHI : 239- 246: slled Eair--Vgg-A nhsha CAT2_MAIZE : 56- 65: anfdr EriperVvh-A rgasa CAT3_MAIZE : 59- 68: ahfdr EriperVvh-A rgasa CATA_ARATH : 43- 52: glill Edyhl-VeklA nfdre CATA_ARATH : 57- 66: anfdr EriperVvh-A rgasa CATA_BOVIN : 66- 75: ahfdr EriperVvh-A kgaga CATA_CANTR : 44- 53: ahfdr EriperVvh-A kgsga CATA_CANTR : 398- 406: qfslq Edqe--VwhgA atpfh CATA_CANTR : 437- 447: ypnqq EhlahnVavhA saada CATA_DROME : 65- 74: shfdr EriperVvh-A kgaga CATA_HAEIN : 311- 321: lnrnp EnffadVeqsA fapsn CATA_HANPO : 57- 66: shfdr EriperVvh-A kgaga CATA_HANPO : 218- 228: ynskg EwvyvqVhfiA nqgvh CATA_HANPO : 452- 461: grtpg Eqesl-VknvA nhvsa CATA_HELAN : 43- 52: gpill Edyhl-VeklA nfdre CATA_HELAN : 57- 66: anfdr EriperVvh-A rgasa CATA_HUMAN : 67- 76: ahfdr EriperVvh-A kgaga CATA_IPOBA : 57- 66: qnftr EriperVvh-A rgasa CATA_LACSK : 45- 54: ahfnr EriperVvh-A kgagr CATA_LISSE : 47- 56: ahfdr ErvperVvh-A rgaga CATA_MICLU : 435- 445: evfsn EernnfVqtvA galkg CATA_MICLU : 436- 445: vfsne Ernnf-VqtvA galkg CATA_MOUSE : 67- 76: ahfdr EriperVvh-A kgaga CATA_ORYSA : 57- 66: ahfar EriperVvh-A rgasa CATA_ORYSA : 475- 482: lsqcd Eslg--Vki-A nrlnv CATA_PEA : 43- 52: gpill Edyhl-VeklA qfdre CATA_PEA : 57- 66: aqfdr EriperVvh-A rgasa CATA_PENJA : 318- 327: mfaev EqvfmdVaa-A skgad CATA_PENJA : 472- 479: vdvtv Efsf--Vaa-A aaari CATA_PENJA : 472- 480: vdvtv Efsf--VaaaA aaria CATA_PENJA : 525- 535: qknal EsssqaVavdA kaaaq CATA_PENJA : 588- 595: sfpam Evis--Vaa-A agava CATA_PENJA : 588- 596: sfpam Evis--VaaaA gavae CATA_PHAAU : 43- 52: gpill Edyhl-VeklA nfdre CATA_PHAAU : 57- 66: anfdr EriperVvh-A rgasa CATA_PHAAU : 237- 246: vkcll EeeaikVgg-A nhsha CATA_PHAAU : 238- 246: kclle Eeaik-Vgg-A nhsha CATA_PHAAU : 239- 246: cllee Eaik--Vgg-A nhsha CATA_PROMI : 466- 474: tkvhp Eygag-Vek-A ikvle CATA_RAT : 67- 76: ahfdr EriperVvh-A kgaga CATA_RICCO : 2- 9: r Esfp--Vps-A icsgk CATA_SOYBN : 43- 52: gpill Edyhl-VeklA nfdre CATA_SOYBN : 57- 66: anfdr EriperVvh-A rgasa CATA_YEAST : 341- 350: tvpyq EasadpVlq-A rlfsy CATA_YEAST : 495- 503: dkgls Eaikk-Vae-A khase CATB_BACFR : 302- 312: lnrnp EnyfaeVeqsA fnpmn CATB_BACSU : 70- 79: thfdh EriperVvh-A rgfgv CATB_BACSU : 504- 513: dadla EeiakgVgv-A apakr CATB_BACSU : 504- 514: dadla EeiakgVgvaA pakrk CATB_BACSU : 505- 513: adlae Eiakg-Vgv-A apakr CATB_BACSU : 505- 514: adlae Eiakg-VgvaA pakrk CATB_BACSU : 554- 563: gngfh EkelqtVle-A lkqeg CATB_BACSU : 556- 563: gfhek Elqt--Vle-A lkqeg CATE_ECOLI : 248- 256: vslqp Etlhn-Vmw-A msdrg CATF_PSESY : 70- 79: qrfdr EriperVvh-A rgtgv CATF_PSESY : 328- 335: dnffq Eteq--Vam-A panlv CATT_YEAST : 56- 65: asfdr ErvperVvh-A kgggc CATV_BACSU : 46- 55: ahfnr ErvperVvh-A kgaga CATV_BACSU : 302- 311: ldrnp EnyfaeVeq-A tfspg CAT_BACFI : 195- 203: iannq Esahm-Vmw-A msdrs N 14: 10.5102 107( 36) L-x(0,2)-N-x(0,2)-P Occurences: 107(36) BCA_STRVL : 124- 130: egnyd LvgNntP vffik BCA_STRVL : 295- 301: veigt LelNrnP enifa BCA_STRVL : 297- 301: igtle LnrN--P enifa BCA_STRVL : 297- 301: igtle L--NrnP enifa BCA_STRVL : 352- 357: inadh LpvNr-P hatea CAT1_GOSHI : 135- 141: egnfd LvgNnfP vffir CAT1_GOSHI : 158- 162: dmvha LkpN--P kshiq CAT1_GOSHI : 363- 368: qtylq LpaNa-P kcahh CAT1_GOSHI : 485- 490: qklas Ll-NvrP si CAT1_GOSHI : 486- 490: klasl L--NvrP si CAT1_LYCES : 135- 141: egnfd LvgNnvP vffnr CAT1_LYCES : 158- 162: dtira LkpN--P kshiq CAT1_LYCES : 322- 326: aeneq LafN--P ghivp CAT1_LYCES : 363- 368: pnymq LpvNa-P kcghh CAT1_MAIZE : 135- 141: egnfd LvgNnmP vffir CAT1_MAIZE : 363- 368: pnylm LpvNa-P kcahh CAT1_MAIZE : 486- 490: klpsr L--NlkP sm CAT2_GOSHI : 135- 141: egnfd LvgNnfP vffir CAT2_GOSHI : 158- 162: dmvha LkpN--P kshiq CAT2_GOSHI : 363- 368: pnylq LpaNa-P kcahh CAT2_GOSHI : 486- 490: kiasr L--NvrP si CAT2_MAIZE : 134- 140: egnwd LvgNnfP vffir CAT2_MAIZE : 157- 161: dmvha LkpN--P rthiq CAT2_MAIZE : 362- 367: pnyll LpaNa-P kcahh CAT3_MAIZE : 137- 143: egnwd LlgNnfP vffir CAT3_MAIZE : 138- 143: gnwdl LgnNf-P vffir CAT3_MAIZE : 138- 143: gnwdl Lg-NnfP vffir CAT3_MAIZE : 365- 370: pnylm LpvNa-P rcgth CATA_ARATH : 135- 141: egnfd LvgNnfP vffir CATA_ARATH : 158- 162: divha LkpN--P kshiq CATA_ARATH : 363- 368: pnylq LpvNa-P kcahh CATA_ARATH : 486- 490: klasr L--NvrP si CATA_BOVIN : 144- 150: dgnwd LvgNntP iffir CATA_BOVIN : 315- 321: ipvgk LvlNrnP vnyfa CATA_BOVIN : 317- 321: vgklv LnrN--P vnyfa CATA_BOVIN : 317- 321: vgklv L--NrnP vnyfa CATA_CANTR : 122- 128: egnld LvyNntP vffir CATA_CANTR : 295- 299: fgkft LneN--P knyfa CATA_CANTR : 295- 299: fgkft L--NenP knyfa CATA_CANTR : 376- 380: nvngn Lg-Nh-P nylas CATA_DROME : 143- 149: dgvwd LvgNntP vffir CATA_DROME : 316- 320: vgkmv LdrN--P knyfa CATA_HAEIN : 133- 139: egnwd LvgNntP vfflr CATA_HAEIN : 306- 310: vgefe LnrN--P enffa CATA_HAEIN : 306- 310: vgefe L--NrnP enffa CATA_HANPO : 135- 141: dgnld LvyNntP iffir CATA_HANPO : 308- 312: fgrft LneN--P knyya CATA_HANPO : 308- 312: fgrft L--NenP knyya CATA_HELAN : 135- 141: egnfd LvgNnfP vffir CATA_HELAN : 158- 162: dmvhs LkpN--P kshiq CATA_HELAN : 363- 368: pnylq LpaNa-P kcahh CATA_HELAN : 486- 490: kiasr L--NvkP ny CATA_HUMAN : 145- 151: dgnwd LvgNntP iffir CATA_HUMAN : 316- 322: ipvgk LvlNrnP vnyfa CATA_HUMAN : 318- 322: vgklv LnrN--P vnyfa CATA_HUMAN : 318- 322: vgklv L--NrnP vnyfa CATA_IPOBA : 135- 141: ggnwd LvgNnfP vffir CATA_IPOBA : 363- 368: pnyml LpvNa-P kcahh CATA_IPOBA : 486- 490: kvasr L--NirP tm CATA_LACSK : 296- 300: igqmv LdeN--P tnnfe CATA_LACSK : 351- 356: anyeq LpvNr-P kvpvh CATA_LISSE : 298- 302: vgtmt LnrN--P dnifa CATA_LISSE : 298- 302: vgtmt L--NrnP dnifa CATA_LISSE : 353- 358: pnylq LpiNs-P ktpvd CATA_MICLU : 124- 130: egnyd LvgNntP ifflr CATA_MICLU : 297- 301: vgvnt LnrN--P knffa CATA_MICLU : 297- 301: vgvnt L--NrnP knffa CATA_MICLU : 352- 357: ahvnq LpvNs-P ddath CATA_MOUSE : 145- 151: dgnwd LvgNntP iffir CATA_MOUSE : 316- 322: ipvgk LvlNknP vnyfa CATA_MOUSE : 318- 322: vgklv LnkN--P vnyfa CATA_MOUSE : 318- 322: vgklv L--NknP vnyfa CATA_ORYSA : 135- 141: egnwd LlgNnfP vffir CATA_ORYSA : 136- 141: gnwdl LgnNf-P vffir CATA_ORYSA : 136- 141: gnwdl Lg-NnfP vffir CATA_ORYSA : 363- 368: pnylm LpvNa-P kcahh CATA_ORYSA : 485- 489: kianr L--NvkP sm CATA_PEA : 135- 141: egnyd LvgNnfP vffvh CATA_PEA : 158- 162: dmvha LkpN--P qthiq CATA_PEA : 363- 368: pnylq LpvNa-P kwshh CATA_PEA : 488- 492: klash L--NmrP si CATA_PENJA : 129- 135: aalqe LvgNnsP isffi CATA_PENJA : 304- 310: ivdae LllNrnP lnmfa CATA_PENJA : 305- 310: vdael Ll-NrnP lnmfa CATA_PENJA : 306- 310: daell LnrN--P lnmfa CATA_PENJA : 306- 310: daell L--NrnP lnmfa CATA_PHAAU : 135- 141: egnfd LvgNnlP vffvr CATA_PHAAU : 158- 162: dmvha LkpN--P knhiq CATA_PHAAU : 363- 368: pnyll LpaNa-P ksahh CATA_PHAAU : 486- 490: kiash L--NmrP ni CATA_PROMI : 297- 301: vgyfe LnrN--P dnyfs CATA_PROMI : 297- 301: vgyfe L--NrnP dnyfs CATA_RAT : 145- 151: dgnwd LvgNntP iffir CATA_RAT : 316- 322: ipvgk LvlNrnP anyfa CATA_RAT : 318- 322: vgklv LnrN--P anyfa CATA_RAT : 318- 322: vgklv L--NrnP anyfa CATA_RICCO : 84- 88: klatr L--NvkP si CATA_SOYBN : 135- 141: egnfd LvgNnfP vffvr CATA_SOYBN : 158- 162: dmvha LkpN--P kshiq CATA_SOYBN : 363- 368: pnylq LpaNa-P kcahh CATA_SOYBN : 486- 490: kiash L--NlkP si CATA_YEAST : 315- 319: vgkiv LneN--P lnffa CATA_YEAST : 315- 319: vgkiv L--NenP lnffa CATB_BACFR : 124- 130: egnwd LvgNntP vfflr CATB_BACFR : 295- 301: qdvgi LelNrnP enyfa CATB_BACFR : 297- 301: vgile LnrN--P enyfa CATB_BACFR : 297- 301: vgile L--NrnP enyfa CATB_BACSU : 148- 154: egnyd LvgNniP vffiq CATB_BACSU : 415- 420: yhkns LqnNd-P spata CATB_BACSU : 415- 420: yhkns Lq-NndP spata CATE_ECOLI : 198- 204: egifd LvgNntP iffiq CATE_ECOLI : 375- 379: vgkmv LnrN--P dnffa CATE_ECOLI : 375- 379: vgkmv L--NrnP dnffa CATE_ECOLI : 571- 575: ltddq L--NitP ppdvn CATF_PSESY : 147- 153: dgnwd LvgNnfP tffir CATF_PSESY : 373- 378: aigls LpvNq-P kvavn CATT_YEAST : 17- 22: ekvys Lq-NgfP yshhp CATT_YEAST : 178- 182: iywdy LtlN--P esihq CATT_YEAST : 180- 182: wdylt L--N--P esihq CATT_YEAST : 366- 371: anyqq LpvNr-P rnlgc CATV_BACSU : 155- 158: dpkth Lk-N--P tavwd CATV_BACSU : 297- 301: vgrmv LdrN--P enyfa CAT_BACFI : 145- 151: egnyd LvgNniP vffiq CAT_BACFI : 378- 383: pnfhe LpiNr-P vcpfh CAT_BACFI : 412- 417: yhkns LaaNt-P qpase O 15: 10.5102 79( 36) D-x(1,3)-G-x(1,3)-A Occurences: 79(36) BCA_STRVL : 107- 112: adavr Dpr-Gw--A lkfyt BCA_STRVL : 150- 158: htqkr DpytGsqeA dnvwd BCA_STRVL : 181- 186: twlfg Dr--Gip-A syrhm BCA_STRVL : 441- 448: kgrli DnlsGfi-A kvsrd CAT1_GOSHI : 118- 123: petlr Dpr-Gf--A vkfyt CAT1_GOSHI : 475- 483: ywsqa DksvGqklA sllnv CAT1_LYCES : 118- 123: pesir Dir-Gf--A vkfyt CAT1_LYCES : 475- 483: ylsqa DkscGqkvA srltv CAT1_MAIZE : 118- 123: petlr Dpr-Gf--A vkfyt CAT2_GOSHI : 118- 123: petlr Dpr-Gf--A vkfyt CAT2_GOSHI : 475- 483: ywsqa DkslGqkiA srlnv CAT2_MAIZE : 117- 122: petlr Dpr-Gf--A vkfyt CAT2_MAIZE : 190- 196: fsflf Ddv-Gip-A dyrhm CAT2_MAIZE : 191- 196: sflfd Dv--Gip-A dyrhm CAT2_MAIZE : 474- 482: nwsqa DrslGqklA srlsa CAT3_MAIZE : 120- 125: grtir Dar-Gf--A vkfyt CAT3_MAIZE : 478- 486: llakv DaslGmkiA trlnm CATA_ARATH : 118- 123: petlr Dpr-Gf--A vkfyt CATA_ARATH : 475- 483: ywsqa DkslGqklA srlnv CATA_BOVIN : 127- 132: adtvr Dpr-Gf--A vkfyt CATA_BOVIN : 395- 400: pmcmm Dnq-Gg--A pnyyp CATA_CANTR : 105- 110: adtar Dpr-Gf--A tkfyt CATA_CANTR : 179- 184: mvlfs Dr--Gtp-A syrem CATA_DROME : 126- 131: adtar Dpr-Gf--A vkfyt CATA_HAEIN : 116- 121: adaer Dir-Gf--A lkfyt CATA_HAEIN : 190- 195: tvvms Dr--Gip-A syrhm CATA_HAEIN : 474- 482: nchwc DaayGegvA kalgl CATA_HANPO : 27- 34: qripl Dst-GykyA ppigp CATA_HANPO : 118- 123: adtar Dpr-Gf--A tkfyt CATA_HANPO : 237- 244: vhnll DeeaGrl-A gedpd CATA_HELAN : 118- 123: petlr Dpr-Gf--A vkfyt CATA_HELAN : 475- 483: ywsqa DkslGqkiA srlnv CATA_HUMAN : 128- 133: adtvr Dpr-Gf--A vkfyt CATA_HUMAN : 396- 401: pmcmq Dnq-Gg--A pnyyp CATA_IPOBA : 118- 123: petir Dpr-Gf--A vkmyt CATA_IPOBA : 475- 483: yltqa DrslGqkvA srlni CATA_LACSK : 106- 111: pdtyr Dvr-Gf--A vkfyt CATA_LACSK : 180- 185: tilms Dr--Gip-A syrmm CATA_LACSK : 460- 468: qfyqa DpeyGrrvA tsvkl CATA_LISSE : 182- 187: tylfs De--Gtp-A syrei CATA_LISSE : 407- 414: qeirg Dis-GrlvA ekpnn CATA_MICLU : 107- 112: pdtwr Dtr-Gf--A lrfyt CATA_MICLU : 418- 424: alran DnnfGe--A gtltr CATA_MOUSE : 128- 133: adtvr Dpr-Gf--A vkfyt CATA_MOUSE : 396- 401: pmcmh Dnq-Gg--A pnyyp CATA_ORYSA : 118- 123: qetir Dpr-Gf--A vkfyt CATA_ORYSA : 474- 482: ylsqc DeslGvkiA nrlnv CATA_PEA : 118- 123: petlr Dpr-Gf--A vkfyt CATA_PEA : 477- 485: ywsqa DrslGqklA shlnm CATA_PENJA : 227- 231: fwyka Dq--Gq--A aevwk CATA_PENJA : 227- 232: fwyka Dq--Gqa-A evwkd CATA_PHAAU : 118- 123: petlr Dpr-Gf--A vkfyt CATA_PHAAU : 475- 483: ywsqa DrslGqkiA shlnm CATA_PROMI : 107- 112: adaer Dir-Gf--A lkfyt CATA_RAT : 128- 133: adtvr Dpr-Gf--A vkfyt CATA_RAT : 396- 401: pmcmh Dnq-Gg--A pnyyp CATA_RICCO : 73- 81: ywiqc DkslGqklA trlnv CATA_SOYBN : 118- 123: petlr Dpr-Gf--A vkfyt CATA_SOYBN : 475- 483: ywsqa DrslGqkiA shlnl CATA_YEAST : 88- 93: tddit Dic-Gs--A mfski CATA_YEAST : 114- 118: stvgg Dk--Gs--A dtvrd CATA_YEAST : 123- 128: adtvr Dpr-Gf--A tkfyt CATA_YEAST : 199- 204: milfs Dr--Gtp-A nyrsm CATA_YEAST : 490- 496: mfarv Dk--GlseA ikkva CATB_BACFR : 107- 112: adaer Dir-Gf--A mkfyt CATB_BACFR : 373- 379: gamrv DgnyGs--A kgyep CATB_BACFR : 465- 473: ncyka DpayGtgvA qalgi CATB_BACSU : 131- 136: adtvr Dar-Gf--A tkfyt CATE_ECOLI : 181- 186: adtvr Dir-Gf--A tkfyt CATE_ECOLI : 597- 604: aipdg Dvk-GrvvA illnd CATE_ECOLI : 677- 681: iadia Dn--Gd--A nyylm CATF_PSESY : 130- 135: petlr Dph-Gf--A tkfyt CATF_PSESY : 215- 221: syrfm Dgn-Gvh-A yklvn CATT_YEAST : 194- 199: tymfg Dr--Gtp-A swasm CATT_YEAST : 531- 537: gllne Dl--GkviA eglgv CATT_YEAST : 548- 553: pwepv Dle-Gy--A ktwsi CATV_BACSU : 107- 112: adtvr Dpr-Gf--A vkfyt CATV_BACSU : 181- 186: tilms Dr--Gip-A tlrhm CATV_BACSU : 464- 472: hfyka DpeyGkrvA eglgl CAT_BACFI : 128- 133: aetvr Dar-Gf--A tkfyt P 16: 10.5102 51( 36) F-x(0,2)-E-x(0,2)-P Occurences: 51(36) BCA_STRVL : 43- 49: eklah FnrEriP ervvh CAT1_GOSHI : 54- 60: eklan FdrEriP ervvh CAT1_LYCES : 54- 60: eklat FdrEkiP ervvh CAT1_MAIZE : 54- 60: eklaq FdrEriP ervvh CAT2_GOSHI : 54- 60: eklan FdrEriP ervvh CAT2_MAIZE : 53- 59: eklan FdrEriP ervvh CAT3_MAIZE : 56- 62: ekvah FdrEriP ervvh CATA_ARATH : 54- 60: eklan FdrEriP ervvh CATA_ARATH : 428- 431: ekenn Fk-E--P geryr CATA_BOVIN : 63- 69: demah FdrEriP ervvh CATA_CANTR : 41- 47: dslah FdrEriP ervvh CATA_DROME : 62- 68: demsh FdrEriP ervvh CATA_HAEIN : 52- 58: eklad FvrEviP errmh CATA_HAEIN : 405- 408: qqqpd Fa-E--P plrin CATA_HAEIN : 405- 409: qqqpd Fa-Ep-P lring CATA_HANPO : 54- 60: dtlsh FdrEriP ervvh CATA_HELAN : 54- 60: eklan FdrEriP ervvh CATA_HUMAN : 64- 70: demah FdrEriP ervvh CATA_HUMAN : 482- 487: kavkn Ft-EvhP dygsh CATA_IPOBA : 54- 60: ekiqn FtrEriP ervvh CATA_LACSK : 42- 48: eklah FnrEriP ervvh CATA_LISSE : 44- 50: eklah FdrErvP ervvh CATA_LISSE : 180- 186: mityl FsdEgtP asyre CATA_MICLU : 80- 82: tkalv F--E--P gvete CATA_MOUSE : 64- 70: demah FdrEriP ervvh CATA_ORYSA : 54- 60: ekvah FarEriP ervvh CATA_PEA : 54- 60: eklaq FdrEriP ervvh CATA_PEA : 282- 286: ahedr F--EfdP ldvtk CATA_PENJA : 277- 281: mtfsd F--EidP fneni CATA_PENJA : 282- 287: feidp Fn-EniP tkvvp CATA_PHAAU : 54- 60: eklan FdrEriP ervvh CATA_PROMI : 43- 49: eklah FdrEviP errmh CATA_PROMI : 390- 394: nsggv Fq-Eq-P dfkep CATA_PROMI : 396- 399: qeqpd Fk-E--P plsie CATA_PROMI : 396- 400: qeqpd Fk-Ep-P lsieg CATA_RAT : 64- 70: demah FdrEriP ervvh CATA_RICCO : 52- 55: rlvgg Fs-E--P ritqe CATA_SOYBN : 54- 60: eklan FdrEriP ervvh CATA_YEAST : 59- 65: dslah FnrEniP qrnph CATA_YEAST : 396- 400: nvngn FgsE--P tylan CATB_BACFR : 43- 49: eklah FdrEviP errmh CATB_BACSU : 67- 73: ekmth FdhEriP ervvh CATB_BACSU : 171- 175: dlvha FkpE--P hnemp CATB_BACSU : 378- 382: lggpn Fh-Ei-P inrpv CATE_ECOLI : 117- 123: ekith FdhEriP erivh CATE_ECOLI : 428- 432: lggpn Fh-Ei-P inrpt CATF_PSESY : 67- 73: qklqr FdrEriP ervvh CATT_YEAST : 53- 59: enias FdrErvP ervvh CATT_YEAST : 408- 412: msyyn FgpE--P nyiss CATT_YEAST : 482- 485: ispld F--Eq-P ralye CATV_BACSU : 43- 49: eklah FnrErvP ervvh CAT_BACFI : 64- 70: ekmth FdhEriP erivh CAT_BACFI : 375- 379: lggpn Fh-El-P inrpv Q 17: 10.5102 91( 36) L-x(2,4)-G-x(1,3)-P Occurences: 91(36) BCA_STRVL : 6- 13: mtqgp LtteaGa--P vadnq BCA_STRVL : 178- 185: hqvtw LfgdrGi--P asyrh CAT1_GOSHI : 90- 98: tcadf Lrap-GvqtP vivrf CAT1_GOSHI : 189- 196: hmftf LfddlGv--P qdyrh CAT1_LYCES : 17- 24: ydtpf LttnaGg--P vynnv CAT1_LYCES : 32- 39: nnvss Ltv--GprgP vlled CAT1_LYCES : 90- 98: tcadf Lrap-GaqtP vicrf CAT1_LYCES : 322- 331: aeneq LafnpGhivP giyys CAT1_MAIZE : 32- 39: nnnsa Ltv--GqrgP illed CAT1_MAIZE : 90- 98: tcadf Lrap-GvqtP vivrf CAT1_MAIZE : 189- 196: hmftf LfddvGi--P lnyrh CAT1_MAIZE : 212- 219: vntys LinrdGk--P hlvkf CAT2_GOSHI : 32- 39: nnnss Ltv--GargP illed CAT2_GOSHI : 90- 98: tcadf Lrap-GvqtP livrf CAT2_GOSHI : 189- 196: hmftf LfddiGv--P qdyrh CAT2_MAIZE : 32- 39: nndss Ltv--GargP illed CAT2_MAIZE : 89- 97: tcadf Lrap-GvqtP vivrf CAT2_MAIZE : 188- 195: hmfsf LfddvGi--P adyrh CAT2_MAIZE : 321- 330: aeneq LafcpGlivP giyys CAT3_MAIZE : 34- 41: ndnea Ltv--GprgP illed CAT3_MAIZE : 92- 100: tcadf Lrap-GvrtP vivrf CAT3_MAIZE : 191- 198: htfff LfdhvGv--P sdyrh CAT3_MAIZE : 324- 333: neneq LafgpGlvvP giyys CATA_ARATH : 90- 98: tcadf Lrap-GvqtP vivrf CATA_ARATH : 189- 196: nmftf LfddiGi--P qdyrh CATA_BOVIN : 26- 33: qkpdv LttggGn--P vgdkl CATA_BOVIN : 26- 33: qkpdv Lttg-Ggn-P vgdkl CATA_BOVIN : 26- 33: qkpdv Ltt--GggnP vgdkl CATA_BOVIN : 41- 48: dklns Ltv--GprgP llvqd CATA_BOVIN : 198- 205: hqvsf LfsdrGi--P dghrh CATA_CANTR : 176- 183: hqvmv LfsdrGt--P asyre CATA_DROME : 197- 204: hqvci LfsdrGt--P dgych CATA_DROME : 220- 227: shtfk LinakGe--P iyakf CATA_DROME : 337- 343: fspah Lvp--Gve-P spdkm CATA_HAEIN : 15- 22: laatn LtmgnGa--P vadnq CATA_HAEIN : 15- 22: laatn Ltm--GngaP vadnq CATA_HAEIN : 30- 37: dnqns Lta--GprgP llaqd CATA_HAEIN : 327- 335: fapsn LvpgiGas-P drmlq CATA_HANPO : 189- 196: hqvmy LfsnrGt--P asyrt CATA_HANPO : 369- 376: pvncp Lks--GsfnP inrdg CATA_HELAN : 32- 39: nnnns Ltv--GsrgP illed CATA_HELAN : 90- 98: tcadf Lrap-GvqtP vivrf CATA_HELAN : 189- 196: hmftf LlddiGv--P qdyrh CATA_HELAN : 190- 196: mftfl Lddi-Gv--P qdyrh CATA_HUMAN : 27- 34: qkadv LttgaGn--P vgdkl CATA_HUMAN : 27- 34: qkadv Ltt--GagnP vgdkl CATA_HUMAN : 199- 206: hqvsf LfsdrGi--P dghrh CATA_IPOBA : 32- 39: nntca Ltv--GsrgP illed CATA_IPOBA : 90- 98: tcadf Lrap-GvqtP livrf CATA_LACSK : 5- 12: mtnq LttneGq--P wadnq CATA_LACSK : 177- 184: hqvti LmsdrGi--P asyrm CATA_LISSE : 7- 14: tdrrn LttnqGv--P igdnq CATA_LISSE : 179- 186: tmity LfsdeGt--P asyre CATA_LISSE : 319- 325: fnpgv Lvp--Gml-P sedrv CATA_MICLU : 22- 29: sdres Ltv--GsegP ivlhd CATA_MICLU : 178- 185: hqvty LmgprGl--P rtwre CATA_MOUSE : 27- 34: qrpdv LttggGn--P igdkl CATA_MOUSE : 27- 34: qrpdv Lttg-Ggn-P igdkl CATA_MOUSE : 27- 34: qrpdv Ltt--GggnP igdkl CATA_MOUSE : 199- 206: hqvsf LfsdrGi--P dghrh CATA_ORYSA : 32- 39: ndnea Ltv--GprgP illed CATA_ORYSA : 90- 98: tcadf Lrsp-GaqtP vivrf CATA_ORYSA : 189- 196: htfff LfddvGi--P tdyrh CATA_ORYSA : 322- 331: neneq LafgpGlvvP giyys CATA_PEA : 32- 39: nnnss Ltv--GsrgP illed CATA_PEA : 90- 98: tcadf Lrap-GvqtP vivrf CATA_PEA : 189- 196: hmfsf LfddvGv--P qdyrh CATA_PENJA : 126- 135: asaaa LqelvGnnsP isffi CATA_PENJA : 353- 360: thlse LtasyGi--P vcrpy CATA_PHAAU : 32- 39: nnnns Ltv--GtrgP illed CATA_PHAAU : 90- 98: tcadf Lrap-GvqtP vivrf CATA_PHAAU : 189- 196: hmfsf LfddlGv--P qdyrh CATA_PROMI : 6- 13: mekkk LttaaGa--P vvdnn CATA_RAT : 27- 34: qkpdv LttggGn--P igdkl CATA_RAT : 27- 34: qkpdv Lttg-Ggn-P igdkl CATA_RAT : 27- 34: qkpdv Ltt--GggnP igdkl CATA_RAT : 199- 206: hqvtf LfsdrGi--P dghrh CATA_RICCO : 48- 55: rslnr Lvg--GfseP ritqe CATA_SOYBN : 32- 39: nnnss Ltv--GsrgP illed CATA_SOYBN : 90- 98: tcadf Lrap-GvqtP livrf CATA_SOYBN : 189- 196: hmfsf LfddvGi--P qdyrh CATA_YEAST : 196- 203: hqvmi LfsdrGt--P anyrs CATA_YEAST : 449- 457: vqarn LyrvlGkq-P gqqkn CATB_BACFR : 6- 13: menkk LtaanGr--P iadnq CATB_BACSU : 45- 52: edehs Lka--GvrgP tlmed CATB_BACSU : 357- 364: ftndp Llq--GrlfP ytdtq CATB_BACSU : 370- 376: ytdtq Lirl-Gg--P nfhei CATE_ECOLI : 29- 38: pgmds LapedGshrP aaept CATE_ECOLI : 95- 102: ddqns Lra--GsrgP tlled CATF_PSESY : 189- 196: rfdfv Lprt-Gsh-P yadpv CATF_PSESY : 339- 345: mapan Lvp--Gie-P sedrl CATF_PSESY : 366- 374: tqmyr Lgai-GlslP vnqpk CATT_YEAST : 17- 22: ekvys Lqn--Gf--P yshhp CATT_YEAST : 261- 267: klftq Lqn--Gek-P kfncy CATV_BACSU : 6- 13: mssnk LttswGa--P vgdnq CATV_BACSU : 79- 87: tkaaf Lsev-GkrtP lfirf CATV_BACSU : 178- 185: hqvti LmsdrGi--P atlrh CAT_BACFI : 42- 49: edefs Lka--GergP tlmed CAT_BACFI : 367- 373: ytdtq Lirl-Gg--P nfhel R 18: 10.5102 66( 36) R-x(1,3)-V-x(1,3)-G Occurences: 66(36) BCA_STRVL : 51- 57: eripe Rv--VharG agayg BCA_STRVL : 91- 97: tetfl RfstVa--G slgaa CAT1_GOSHI : 62- 68: eripe Rv--VharG asakg CAT1_LYCES : 62- 68: ekipe Rv--VharG asakg CAT1_MAIZE : 62- 68: eripe Rv--VharG asakg CAT2_GOSHI : 62- 68: eripe Rv--VharG asakg CAT2_MAIZE : 61- 67: eripe Rv--VharG asakg CAT3_MAIZE : 64- 70: eripe Rv--VharG asakg CAT3_MAIZE : 414- 418: tplpp Rp--Va--G rreka CATA_ARATH : 62- 68: eripe Rv--VharG asakg CATA_BOVIN : 71- 77: eripe Rv--VhakG agafg CATA_BOVIN : 111- 117: tpiav RfstVa--G esgsa CATA_CANTR : 49- 55: eripe Rv--VhakG sgayg CATA_CANTR : 89- 95: trift RfstVg--G elgsa CATA_DROME : 70- 76: eripe Rv--VhakG agafg CATA_DROME : 110- 116: tplav RfstVg--G esgsa CATA_HAEIN : 100- 106: temfa RfttVa--G ergaa CATA_HANPO : 62- 68: eripe Rv--VhakG agayg CATA_HANPO : 102- 108: trift RfstVg--G ekgsa CATA_HELAN : 62- 68: eripe Rv--VharG asakg CATA_HELAN : 449- 453: erfin Rv--Vg--G lsdpr CATA_HUMAN : 72- 78: eripe Rv--VhakG agafg CATA_HUMAN : 112- 118: tpiav RfstVa--G esgsa CATA_IPOBA : 62- 68: eripe Rv--VharG asakg CATA_IPOBA : 411- 415: fptpl Ri--Vt--G qrdkc CATA_LACSK : 50- 56: eripe Rv--VhakG agrkg CATA_LACSK : 90- 96: tplit RfsqVa--G eagyp CATA_LACSK : 105- 109: ypdty Rd--Vr--G favkf CATA_LISSE : 52- 58: ervpe Rv--VharG agahg CATA_LISSE : 92- 99: tevfa RfstVih-G qhspe CATA_LISSE : 215- 221: vyvkl Rw--VpkaG ivnls CATA_MICLU : 91- 97: tevll RfstVa--G engsp CATA_MOUSE : 23- 30: qrasq Rpd-VlttG ggnpi CATA_MOUSE : 72- 78: eripe Rv--VhakG agafg CATA_MOUSE : 112- 118: tpiav RfstVa--G esgsa CATA_ORYSA : 62- 68: eripe Rv--VharG asakg CATA_ORYSA : 411- 415: tpitp Rp--Vv--G rrqka CATA_PEA : 62- 68: eripe Rv--VharG asakg CATA_PENJA : 617- 623: amffs Ri--VasrG aaana CATA_PHAAU : 62- 68: eripe Rv--VharG asakg CATA_PROMI : 91- 97: temfa RfstVa--G ergaa CATA_PROMI : 189- 193: lplsy Rf--Vh--G fgsht CATA_PROMI : 189- 195: lplsy Rf--VhgfG shtys CATA_RAT : 72- 78: eripe Rv--VhakG agafg CATA_RAT : 112- 118: tpiav RfstVa--G esgsa CATA_RICCO : 47- 51: ersln Rl--Vg--G fsepr CATA_SOYBN : 62- 68: eripe Rv--VharG asakg CATA_YEAST : 107- 113: tkclt RfstVg--G dkgsa CATB_BACFR : 91- 97: tecfv RfstVa--G ergaa CATB_BACSU : 75- 81: eripe Rv--VharG fgvhg CATB_BACSU : 80- 86: rvvha RgfgVh--G ffqvy CATB_BACSU : 115- 121: tpvfv RfstVa--G skgsa CATB_BACSU : 228- 234: gvhtf Rf--VneqG karfv CATB_BACSU : 542- 549: ktast RkvaVla-G ngfhe CATE_ECOLI : 125- 131: eripe Ri--VharG saahg CATE_ECOLI : 165- 171: tpvfv RfstVq--G gagsa CATE_ECOLI : 165- 172: tpvfv RfstVqg-G agsad CATE_ECOLI : 521- 526: tpfeq Rhi-Vd--G fsfel CATF_PSESY : 75- 81: eripe Rv--VharG tgvkg CATF_PSESY : 80- 86: rvvha RgtgVk--G eftas CATF_PSESY : 114- 121: tpvfv RfssVvh-G nhspe CATT_YEAST : 61- 67: ervpe Rv--VhakG ggcrl CATT_YEAST : 101- 107: cpglv RfstVg--G esgtp CATV_BACSU : 51- 57: ervpe Rv--VhakG agahg CATV_BACSU : 91- 97: tplfi RfstVa--G elgsa CAT_BACFI : 72- 78: eripe Ri--VharG faahg CAT_BACFI : 112- 118: tpvfv RfstVa--G skgsa CAT_BACFI : 225- 231: gvhtf Rf--VneeG kahfv S 19: 10.5102 66( 36) R-x(2,4)-R-x(0,2)-G Occurences: 66(36) BCA_STRVL : 51- 57: eripe RvvhaR--G agayg BCA_STRVL : 51- 59: eripe RvvhaRgaG aygtf BCA_STRVL : 106- 110: aadav Rdp--R--G walkf BCA_STRVL : 245- 251: hqrdl ReaieR--G dfptw BCA_STRVL : 363- 369: hatea Rths-Rd-G flydg CAT1_GOSHI : 62- 68: eripe RvvhaR--G asakg CAT1_GOSHI : 117- 121: spetl Rdp--R--G favkf CAT1_LYCES : 62- 68: ekipe RvvhaR--G asakg CAT1_LYCES : 117- 121: spesi Rdi--R--G favkf CAT1_MAIZE : 62- 68: eripe RvvhaR--G asakg CAT1_MAIZE : 117- 121: spetl Rdp--R--G favkf CAT2_GOSHI : 62- 68: eripe RvvhaR--G asakg CAT2_GOSHI : 117- 121: spetl Rdp--R--G favkf CAT2_MAIZE : 61- 67: eripe RvvhaR--G asakg CAT2_MAIZE : 116- 120: spetl Rdp--R--G favkf CAT3_MAIZE : 64- 70: eripe RvvhaR--G asakg CAT3_MAIZE : 119- 123: sgrti Rda--R--G favkf CAT3_MAIZE : 398- 404: dyyps Rhar-Rc-G raapt CAT3_MAIZE : 398- 404: dyyps Rha--RrcG raapt CATA_ARATH : 62- 68: eripe RvvhaR--G asakg CATA_ARATH : 117- 121: spetl Rdp--R--G favkf CATA_BOVIN : 126- 130: sadtv Rdp--R--G favkf CATA_CANTR : 104- 108: sadta Rdp--R--G fatkf CATA_DROME : 125- 129: sadta Rdp--R--G favkf CATA_HAEIN : 115- 119: aadae Rdi--R--G falkf CATA_HAEIN : 375- 383: vhsnq RdgqgRvdG nygsl CATA_HANPO : 117- 121: sadta Rdp--R--G fatkf CATA_HELAN : 62- 68: eripe RvvhaR--G asakg CATA_HELAN : 117- 121: spetl Rdp--R--G favkf CATA_HELAN : 445- 452: pdrqe Rfin-RvvG glsdp CATA_HUMAN : 127- 131: sadtv Rdp--R--G favkf CATA_IPOBA : 62- 68: eripe RvvhaR--G asakg CATA_IPOBA : 117- 121: speti Rdp--R--G favkm CATA_LACSK : 105- 109: ypdty Rdv--R--G favkf CATA_LISSE : 52- 58: ervpe RvvhaR--G agahg CATA_LISSE : 52- 60: ervpe RvvhaRgaG ahgkf CATA_LISSE : 107- 111: spetl Rdp--R--G fsvkf CATA_LISSE : 190- 194: tpasy Rei--R--G ssvha CATA_MICLU : 106- 110: spdtw Rdt--R--G falrf CATA_MOUSE : 127- 131: sadtv Rdp--R--G favkf CATA_ORYSA : 62- 68: eripe RvvhaR--G asakg CATA_ORYSA : 117- 121: sqeti Rdp--R--G favkf CATA_PEA : 62- 68: eripe RvvhaR--G asakg CATA_PEA : 117- 121: spetl Rdp--R--G favkf CATA_PENJA : 617- 623: amffs RivasR--G aaana CATA_PHAAU : 62- 68: eripe RvvhaR--G asakg CATA_PHAAU : 117- 121: spetl Rdp--R--G favkf CATA_PROMI : 106- 110: aadae Rdi--R--G falkf CATA_PROMI : 366- 374: fhnyh RdgamRvdG nsgng CATA_PROMI : 436- 443: ddehq Rmfa-RiaG elsqa CATA_RAT : 127- 131: sadtv Rdp--R--G favkf CATA_RICCO : 43- 50: pdrqe Rsln-RlvG gfsep CATA_SOYBN : 62- 68: eripe RvvhaR--G asakg CATA_SOYBN : 117- 121: spetl Rdp--R--G favkf CATA_YEAST : 122- 126: sadtv Rdp--R--G fatkf CATA_YEAST : 447- 454: dfvqa Rnly-RvlG kqpgq CATB_BACFR : 106- 110: aadae Rdi--R--G famkf CATB_BACFR : 366- 374: fhafh RdgamRvdG nygsa CATB_BACSU : 75- 81: eripe RvvhaR--G fgvhg CATB_BACSU : 75- 83: eripe RvvhaRgfG vhgff CATB_BACSU : 130- 134: sadtv Rda--R--G fatkf CATE_ECOLI : 96- 101: dqnsl Rags-R--G ptlle CATE_ECOLI : 125- 131: eripe RivhaR--G saahg CATE_ECOLI : 180- 184: sadtv Rdi--R--G fatkf CATE_ECOLI : 445- 452: yhnfq RdgmhRm-G idtnp CATF_PSESY : 75- 81: eripe RvvhaR--G tgvkg CATF_PSESY : 75- 83: eripe RvvhaRgtG vkgef CATT_YEAST : 116- 120: tpdta Rdp--R--G vsfkf CATV_BACSU : 106- 110: sadtv Rdp--R--G favkf CAT_BACFI : 72- 78: eripe RivhaR--G faahg CAT_BACFI : 127- 131: saetv Rda--R--G fatkf T 20: 10.5102 107( 36) S-x(1,3)-D-x(3,5)-R Occurences: 107(36) BCA_STRVL : 325- 333: pgigp Sp--DkmlqgR lfayg BCA_STRVL : 432- 438: lyrlm Se--Dekg--R lidnl BCA_STRVL : 451- 458: fiakv Srd-Diae--R aignf BCA_STRVL : 451- 458: fiakv Sr--Ddiae-R aignf CAT1_GOSHI : 336- 344: pgiyy Sd--DkllqtR ifsys CAT1_GOSHI : 347- 355: qtrif Sys-Dtqrh-R lgqty CAT1_GOSHI : 437- 445: geryr SwaaDrqe--R ficrw CAT1_LYCES : 336- 344: pgiyy Se--DkllqtR ifaya CAT1_LYCES : 437- 445: geryr SwepDrqd--R yinkw CAT1_MAIZE : 336- 344: paihy Sd--DkllqtR ifsya CAT1_MAIZE : 347- 355: qtrif Sya-Dtqrh-R lgpny CAT1_MAIZE : 437- 445: geryr Sf--DparqdR fiqrw CAT2_GOSHI : 234- 242: tcgvk SlleDeai--R vggan CAT2_GOSHI : 336- 344: pgiyy Sd--DkllqtR ifsys CAT2_GOSHI : 347- 355: qtrif Sys-Dtqrh-R lgpny CAT2_GOSHI : 437- 445: geryr SfsaDrqe--R finrw CAT2_GOSHI : 439- 445: ryrsf Sa--Drqe--R finrw CAT2_MAIZE : 233- 241: tcgvr SlmdDeav--R cganh CAT2_MAIZE : 233- 241: tcgvr Slm-Ddeav-R cganh CAT2_MAIZE : 335- 343: pgiyy Sd--DkllqtR ifsys CAT2_MAIZE : 346- 354: qtrif Sys-Dtqrh-R lgpny CAT3_MAIZE : 236- 244: tcger SiltDeea--R vggrn CAT3_MAIZE : 338- 346: pgiyy Sd--DkmlqcR vfaya CAT3_MAIZE : 440- 448: geryr SwdaDrqd--R fvkai CAT3_MAIZE : 440- 448: geryr Sw--DadrqdR fvkai CATA_ARATH : 336- 344: pgihy Sd--DkllqtR vfsya CATA_ARATH : 347- 355: qtrvf Sya-Dtqrh-R lgpny CATA_BOVIN : 119- 129: tvage SgsaDtvrdpR gfavk CATA_BOVIN : 121- 129: agesg Sa--DtvrdpR gfavk CATA_BOVIN : 345- 353: pgiep Sp--DkmlqgR lfayp CATA_BOVIN : 433- 443: vqrfn SandDnvtqvR tfylk CATA_CANTR : 99- 107: ggelg Sa--DtardpR gfatk CATA_CANTR : 323- 331: phmep Sa--DpvlqsR lfsya CATA_CANTR : 334- 342: qsrlf Sya-Dthrh-R lgtny CATA_CANTR : 448- 457: vavha Saa-DapiqdR viayf CATA_DROME : 118- 128: tvgge SgsaDtardpR gfavk CATA_DROME : 120- 128: ggesg Sa--DtardpR gfavk CATA_DROME : 253- 261: adqla StdpDysi--R dlynr CATA_DROME : 253- 261: adqla St--DpdysiR dlynr CATA_DROME : 259- 266: tdpdy Sir-Dlyn--R iktck CATA_DROME : 344- 352: pgvep Sp--DkmlhgR lfsys CATA_DROME : 355- 363: hgrlf Sys-Dthrh-R lgpny CATA_HAEIN : 334- 342: pgiga Sp--DrmlqaR lfnya CATA_HAEIN : 372- 380: rcpvh SnqrDgqg--R vdgny CATA_HANPO : 112- 120: ggekg Sa--DtardpR gfatk CATA_HANPO : 336- 344: pgmep Sn--DpvlqsR lfsyp CATA_HANPO : 347- 355: qsrlf Syp-Dthrh-R lgpny CATA_HANPO : 465- 474: vanhv Saa-DefiqdR vyeyf CATA_HELAN : 336- 344: pgiyy Sd--DkllqtR ifsys CATA_HELAN : 347- 355: qtrif Sys-Dtqrh-R lgpny CATA_HELAN : 437- 445: geryr SfspDrqe--R finrv CATA_HELAN : 439- 445: ryrsf Sp--Drqe--R finrv CATA_HUMAN : 120- 130: tvage SgsaDtvrdpR gfavk CATA_HUMAN : 122- 130: agesg Sa--DtvrdpR gfavk CATA_HUMAN : 254- 263: daarl Sqe-DpdygiR dlfna CATA_HUMAN : 346- 354: pgiea Sp--DkmlqgR lfayp CATA_IPOBA : 336- 344: pgiyf Sd--DkmlqaR vfaya CATA_IPOBA : 437- 445: gdryr SwapDrqd--R finrw CATA_LACSK : 145- 155: pdfih SqkrDprthaR sqdmq CATA_LACSK : 324- 332: pgiea Sp--DkllqgR lfgyk CATA_LACSK : 425- 431: lyrll Sa--Deqt--R lieni CATA_LISSE : 326- 334: pgmlp Se--DrvlqgR lfsys CATA_LISSE : 337- 345: qgrlf Sys-Dtqrh-R vgpny CATA_MICLU : 101- 109: ageng Sp--DtwrdtR gfalr CATA_MICLU : 325- 333: pgigl Sp--DrmllgR afayh CATA_MOUSE : 120- 130: tvage SgsaDtvrdpR gfavk CATA_MOUSE : 122- 130: agesg Sa--DtvrdpR gfavk CATA_MOUSE : 346- 354: pgiep Sp--DkmlqgR lfayp CATA_MOUSE : 434- 444: vkrfn SaneDnvtqvR tfytk CATA_ORYSA : 336- 344: pgiyy Sd--DkmlqcR vfaya CATA_ORYSA : 437- 445: geryr SwapDrqe--R fiavr CATA_PEA : 336- 344: pgiyy Sd--DkmlqtR vfsya CATA_PEA : 347- 355: qtrvf Sya-Dsqrh-R lgpny CATA_PENJA : 42- 49: llqdi Sew-Devf--R fdrle CATA_PHAAU : 336- 344: pgvyy Sd--DkmlqtR ifsya CATA_PHAAU : 347- 355: qtrif Sya-Dsqrh-R lgpny CATA_PHAAU : 437- 445: gerfr SwapDrqd--R firrw CATA_PROMI : 323- 333: ivpgi SfspDkmlqgR lfsyg CATA_PROMI : 325- 333: pgisf Sp--DkmlqgR lfsyg CATA_PROMI : 336- 344: qgrlf Syg-Dahry-R lgvnh CATA_PROMI : 430- 436: lyell Sd--Dehq--R mfari CATA_RAT : 120- 130: tvage SgsaDtvrdpR gfavk CATA_RAT : 122- 130: agesg Sa--DtvrdpR gfavk CATA_RAT : 346- 354: pgiep Sp--DkmlqgR lfayp CATA_RAT : 434- 444: vkrfn SaneDnvtqvR tfytk CATA_RICCO : 35- 43: geryr SwppDrqe--R slnrl CATA_SOYBN : 234- 242: tsgek SlldDeai--R vggsn CATA_SOYBN : 234- 242: tsgek Sll-Ddeai-R vggsn CATA_SOYBN : 336- 344: pgvyy Sd--DkllqtR vfsya CATA_SOYBN : 347- 355: qtrvf Sya-Dtqrh-R lgpny CATA_SOYBN : 437- 445: geryr SwpsDrqe--R fvrrw CATA_YEAST : 117- 125: ggdkg Sa--DtvrdpR gfatk CATA_YEAST : 343- 351: pyqea Sa--DpvlqaR lfsya CATA_YEAST : 354- 362: qarlf Sya-Dahry-R lgpnf CATB_BACFR : 325- 333: egigf Sp--DkmlqgR lfsyg CATB_BACFR : 336- 344: qgrlf Syg-Daqry-R lgvns CATB_BACSU : 2- 8: m Sd--Dqnk--R vnehs CATB_BACSU : 125- 133: agskg Sa--DtvrdaR gfatk CATE_ECOLI : 175- 183: qggag Sa--DtvrdiR gfatk CATE_ECOLI : 414- 422: qgrlf Syt-Dtqis-R lggpn CATE_ECOLI : 464- 471: nyepn Sin-Dnwp--R etppg CATF_PSESY : 182- 191: nldnd SrrfDfvlp-R tgshp CATF_PSESY : 346- 354: pgiep Se--DrllqgR vfsya CATF_PSESY : 357- 365: qgrvf Sya-Dtqmy-R lgaig CATT_YEAST : 109- 119: tvgge SgtpDtardpR gvsfk CATT_YEAST : 339- 347: pgikp Sn--DsvlqaR lfsyp CATT_YEAST : 350- 358: qarlf Syp-Dtqrh-R lgany CATT_YEAST : 478- 486: yvygi Spl-Dfeqp-R alyek CATV_BACSU : 101- 109: agelg Sa--DtvrdpR gfavk CATV_BACSU : 325- 333: pgidv Sp--DkmlqgR lfayh CATV_BACSU : 429- 435: lyrlm Se--Dert--R lveni CAT_BACFI : 361- 369: qgrlf Syt-Dtqli-R lggpn Number of patterns evaluated by Pratt:921 Total running time: 6 seconds