------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 8 sequences from file CALSEQUESTRIN_2 PATTERN CONSERVATION: CM: min Nr of Seqs to Match 8 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 50 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename CALSEQUESTRIN_2.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: CAQC_CANFA 410 CAQC_RABIT 409 CAQS_CANFA 56 CAQS_CHICK 406 CAQS_HUMAN 390 CAQS_RABIT 395 CAQS_RANES 420 CAQS_RAT 20 Pratt run started at Thu Feb 6 19:04:01 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 45.3706 13( 8) E-x(0,1)-G-L-x-F-P-x-Y-D-G-x-D-R-V 2: 41.7005 8( 8) G-L-x-F-P-x-Y-D-G-x-D-R-V 3: 37.5305 8( 8) L-x-F-P-x-Y-D-G-x-D-R-V 4: 33.3604 8( 8) F-P-x-Y-D-G-x-D-R-V 5: 29.1904 8( 8) P-x-Y-D-G-x-D-R-V 6: 25.0203 8( 8) Y-D-G-x-D-R-V 7: 20.8503 8( 8) D-G-x-D-R-V 8: 20.3503 10( 8) L-D-x(2)-E-x(0,1)-D-x-V 9: 19.8503 10( 8) E-x(1,2)-G-x(2)-F-x(3)-D-x(2,3)-D 10: 18.8503 10( 8) E-x-D-x(0,2)-G-x(3)-V-x(2,4)-A 11: 18.8503 10( 8) D-x-P-x(0,2)-E-x(1,3)-D-x(4)-V 12: 16.6802 8( 8) G-x-D-R-V 13: 15.6802 8( 8) E-x-D-G-x(3,5)-V 14: 15.1802 16( 8) V-x(0,1)-N-V-x(0,2)-A 15: 12.5102 9( 8) D-R-V 16: 12.5102 11( 8) D-F-P 17: 12.5102 11( 8) D-G-x-D 18: 12.0102 11( 8) P-E-x(0,1)-D 19: 12.0102 13( 8) E-x(0,1)-D-G 20: 12.0102 25( 8) E-x(0,1)-D-x(2)-D Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 59.8284 13( 8) E-x(0,1)-G-L-[DN]-F-P-[ET]-Y-D-G-x-D-R-V-[IV]-x-[ILV]-[ANST] B 2: 56.1584 8( 8) G-L-[DN]-F-P-[ET]-Y-D-G-x-D-R-V-[IV]-x-[ILV]-[ANST] C 3: 51.9883 8( 8) L-[DN]-F-P-[ET]-Y-D-G-x-D-R-V-[IV]-x-[ILV]-[ANST] D 4: 44.6443 8( 8) F-P-[ET]-Y-D-G-x-D-R-V-[IV]-x-[ILV]-[ANST] E 5: 40.5926 10( 8) L-D-[FLV]-[ILP]-E-x(0,1)-D-[GP]-V-[DE]-x-[IV]-x-[GNS]-x(2)-[ADE] F 6: 40.4742 8( 8) P-[ET]-Y-D-G-x-D-R-V-[IV]-x-[ILV]-[ANST] G 7: 37.5811 9( 8) E-x(1,2)-G-[LV]-[DGN]-F-[GP]-x(2)-D-x(2,3)-D-x-[AV]-[IV]-[ADNS] H 8: 35.4864 8( 8) E-x(0,1)-D-[DG]-[DV]-D-[DR]-[DNV]-x-[DN]-[DNV]-[ADNS]-[AD] I 9: 33.7927 10( 8) D-[FL]-P-x(0,2)-E-x(1,3)-D-x(2)-[DE]-[DR]-V-[ILV]-x-[GIV] J 10: 33.1291 8( 8) Y-D-G-x-D-R-V-[IV]-x-[ILV]-[ANST] K 11: 28.9591 8( 8) D-G-x-D-R-V-[IV]-x-[ILV]-[ANST] L 12: 27.8960 10( 8) E-x-D-x(0,2)-G-[IV]-[DH]-x-V-x(2,4)-A-[DEK] M 13: 25.3036 9( 8) E-x(0,1)-D-G-x(3)-[APTV]-x-[NTV]-[LV]-[ANV]-[ADE] N 14: 24.7890 8( 8) G-x-D-R-V-[IV]-x-[ILV]-[ANST] O 15: 21.5266 8( 8) E-[FY]-D-G-x(3,5)-V-[ILV] P 16: 21.5029 10( 8) L-D-[FLV]-[ILP]-E-x(0,1)-D Q 17: 20.6190 8( 8) D-R-V-[IV]-x-[ILV]-[ANST] R 18: 18.4011 16( 8) V-x(0,1)-N-V-x(0,2)-A-[DK] S 19: 17.9483 10( 8) D-[FL]-P-x(0,2)-E-x(1,3)-D T 20: 17.8980 11( 8) D-F-P-x(3)-[AGPT]-x(2)-[ER] Best patterns with alignements: fitness hits(seqs) Pattern A 1: 59.8284 13( 8) E-x(0,1)-G-L-[DN]-F-P-[ET]-Y-D-G-x-D-R-V-[IV]-x-[ILV]-[ANST] Occurences: 13(8) CAQC_CANFA : 20- 38: ascra EeGLNFPTYDGkDRVVsLT eknfk CAQC_CANFA : 21- 38: scrae E-GLNFPTYDGkDRVVsLT eknfk CAQC_RABIT : 20- 38: sscra EeGLNFPTYDGkDRVVsLS eknfk CAQC_RABIT : 21- 38: scrae E-GLNFPTYDGkDRVVsLS eknfk CAQS_CANFA : 1- 19: EeGLDFPEYDGvDRVVnVN aknyk CAQS_CANFA : 2- 19: e E-GLDFPEYDGvDRVVnVN aknyk CAQS_CHICK : 20- 38: fccka EeGLNFPTYDGkDRVIdLN eknyk CAQS_CHICK : 21- 38: cckae E-GLNFPTYDGkDRVIdLN eknyk CAQS_HUMAN : 30- 47: gvqgq E-GLDFPEYDGvDRVInVN aknyk CAQS_RABIT : 29- 47: sgvhg EeGLDFPEYDGvDRVInVN aknyk CAQS_RABIT : 30- 47: gvhge E-GLDFPEYDGvDRVInVN aknyk CAQS_RANES : 23- 41: lgprg EdGLDFPEYDGeDRVIhIS lknyk CAQS_RAT : 1- 19: EdGLDFPEYDGvDRVInVA d B 2: 56.1584 8( 8) G-L-[DN]-F-P-[ET]-Y-D-G-x-D-R-V-[IV]-x-[ILV]-[ANST] Occurences: 8(8) CAQC_CANFA : 22- 38: craee GLNFPTYDGkDRVVsLT eknfk CAQC_RABIT : 22- 38: craee GLNFPTYDGkDRVVsLS eknfk CAQS_CANFA : 3- 19: ee GLDFPEYDGvDRVVnVN aknyk CAQS_CHICK : 22- 38: ckaee GLNFPTYDGkDRVIdLN eknyk CAQS_HUMAN : 31- 47: vqgqe GLDFPEYDGvDRVInVN aknyk CAQS_RABIT : 31- 47: vhgee GLDFPEYDGvDRVInVN aknyk CAQS_RANES : 25- 41: prged GLDFPEYDGeDRVIhIS lknyk CAQS_RAT : 3- 19: ed GLDFPEYDGvDRVInVA d C 3: 51.9883 8( 8) L-[DN]-F-P-[ET]-Y-D-G-x-D-R-V-[IV]-x-[ILV]-[ANST] Occurences: 8(8) CAQC_CANFA : 23- 38: raeeg LNFPTYDGkDRVVsLT eknfk CAQC_RABIT : 23- 38: raeeg LNFPTYDGkDRVVsLS eknfk CAQS_CANFA : 4- 19: eeg LDFPEYDGvDRVVnVN aknyk CAQS_CHICK : 23- 38: kaeeg LNFPTYDGkDRVIdLN eknyk CAQS_HUMAN : 32- 47: qgqeg LDFPEYDGvDRVInVN aknyk CAQS_RABIT : 32- 47: hgeeg LDFPEYDGvDRVInVN aknyk CAQS_RANES : 26- 41: rgedg LDFPEYDGeDRVIhIS lknyk CAQS_RAT : 4- 19: edg LDFPEYDGvDRVInVA d D 4: 44.6443 8( 8) F-P-[ET]-Y-D-G-x-D-R-V-[IV]-x-[ILV]-[ANST] Occurences: 8(8) CAQC_CANFA : 25- 38: eegln FPTYDGkDRVVsLT eknfk CAQC_RABIT : 25- 38: eegln FPTYDGkDRVVsLS eknfk CAQS_CANFA : 6- 19: eegld FPEYDGvDRVVnVN aknyk CAQS_CHICK : 25- 38: eegln FPTYDGkDRVIdLN eknyk CAQS_HUMAN : 34- 47: qegld FPEYDGvDRVInVN aknyk CAQS_RABIT : 34- 47: eegld FPEYDGvDRVInVN aknyk CAQS_RANES : 28- 41: edgld FPEYDGeDRVIhIS lknyk CAQS_RAT : 6- 19: edgld FPEYDGvDRVInVA d E 5: 40.5926 10( 8) L-D-[FLV]-[ILP]-E-x(0,1)-D-[GP]-V-[DE]-x-[IV]-x-[GNS]-x(2)-[ADE] Occurences: 10(8) CAQC_CANFA : 139- 154: lvefl LDLIE-DPVEiInSklE vqafe CAQC_RABIT : 139- 154: lvefl LDLIE-DPVEiInSklE vqafe CAQS_CANFA : 4- 20: eeg LDFPEyDGVDrVvNvnA knykn CAQS_CHICK : 139- 154: lvefl LDLLE-DPVEvInSklE lqafd CAQS_HUMAN : 32- 48: qgqeg LDFPEyDGVDrViNvnA knykn CAQS_HUMAN : 148- 163: ivefl LDVLE-DPVElIeGerE lqafe CAQS_RABIT : 32- 48: hgeeg LDFPEyDGVDrViNvnA knykn CAQS_RABIT : 148- 163: lvefl LDVLE-DPVElIeGerE lqafe CAQS_RANES : 142- 157: lvefl LDVLE-DPVEfIdGshE laafe CAQS_RAT : 4- 20: edg LDFPEyDGVDrViNvaD F 6: 40.4742 8( 8) P-[ET]-Y-D-G-x-D-R-V-[IV]-x-[ILV]-[ANST] Occurences: 8(8) CAQC_CANFA : 26- 38: eglnf PTYDGkDRVVsLT eknfk CAQC_RABIT : 26- 38: eglnf PTYDGkDRVVsLS eknfk CAQS_CANFA : 7- 19: egldf PEYDGvDRVVnVN aknyk CAQS_CHICK : 26- 38: eglnf PTYDGkDRVIdLN eknyk CAQS_HUMAN : 35- 47: egldf PEYDGvDRVInVN aknyk CAQS_RABIT : 35- 47: egldf PEYDGvDRVInVN aknyk CAQS_RANES : 29- 41: dgldf PEYDGeDRVIhIS lknyk CAQS_RAT : 7- 19: dgldf PEYDGvDRVInVA d G 7: 37.5811 9( 8) E-x(1,2)-G-[LV]-[DGN]-F-[GP]-x(2)-D-x(2,3)-D-x-[AV]-[IV]-[ADNS] Occurences: 9(8) CAQC_CANFA : 20- 36: ascra Ee-GLNFPtyDgk-DrVVS ltekn CAQC_RABIT : 20- 36: sscra Ee-GLNFPtyDgk-DrVVS lsekn CAQS_CANFA : 1- 17: Ee-GLDFPeyDgv-DrVVN vnakn CAQS_CHICK : 20- 36: fccka Ee-GLNFPtyDgk-DrVID lnekn CAQS_HUMAN : 94- 112: aaqvl EdkGVGFGlvDsekDaAVA kklgl CAQS_RABIT : 29- 45: sgvhg Ee-GLDFPeyDgv-DrVIN vnakn CAQS_RABIT : 94- 112: aaqvl EdkGVGFGlvDsekDaAVA kklgl CAQS_RANES : 88- 106: aaqvl EdkGVGFGlvDsedDaAVA kklgl CAQS_RAT : 1- 17: Ed-GLDFPeyDgv-DrVIN vad H 8: 35.4864 8( 8) E-x(0,1)-D-[DG]-[DV]-D-[DR]-[DNV]-x-[DN]-[DNV]-[ADNS]-[AD] Occurences: 8(8) CAQC_CANFA : 387- 398: dgddd E-DDDDDDgNNSD eesnd CAQC_RABIT : 380- 391: ddned E-DDDDDNdDDDD dngns CAQS_CANFA : 8- 20: gldfp EyDGVDRVvNVNA knykn CAQS_CHICK : 373- 384: gkint E-DDDDDDdDDDD ddddd CAQS_CHICK : 373- 385: gkint EdDDDDDDdDDDD ddddd CAQS_HUMAN : 36- 48: gldfp EyDGVDRViNVNA knykn CAQS_RABIT : 36- 48: gldfp EyDGVDRViNVNA knykn CAQS_RANES : 376- 387: gevnt E-DDDDDDdDDDD ddddd CAQS_RANES : 376- 388: gevnt EdDDDDDDdDDDD ddddd CAQS_RAT : 8- 20: gldfp EyDGVDRViNVAD I 9: 33.7927 10( 8) D-[FL]-P-x(0,2)-E-x(1,3)-D-x(2)-[DE]-[DR]-V-[ILV]-x-[GIV] Occurences: 10(8) CAQC_CANFA : 351- 368: ipddd DLPtaEeleDwiEDVLsG kinte CAQC_RABIT : 351- 368: ipddd DLPtaEeleDwiEDVLsG kinte CAQS_CANFA : 5- 18: eegl DFP--Ey--DgvDRVVnV nakny CAQS_CHICK : 351- 368: irddd DLPtaEeleDwiEDVLsG kinte CAQS_HUMAN : 33- 46: gqegl DFP--Ey--DgvDRVInV nakny CAQS_HUMAN : 360- 377: mddee DLPsaEeleDwlEDVLeG einte CAQS_RABIT : 33- 46: geegl DFP--Ey--DgvDRVInV nakny CAQS_RABIT : 360- 377: mddee DLPsaEeleDwlEDVLeG einte CAQS_RANES : 27- 40: gedgl DFP--Ey--DgeDRVIhI slkny CAQS_RAT : 5- 18: edgl DFP--Ey--DgvDRVInV ad J 10: 33.1291 8( 8) Y-D-G-x-D-R-V-[IV]-x-[ILV]-[ANST] Occurences: 8(8) CAQC_CANFA : 28- 38: lnfpt YDGkDRVVsLT eknfk CAQC_RABIT : 28- 38: lnfpt YDGkDRVVsLS eknfk CAQS_CANFA : 9- 19: ldfpe YDGvDRVVnVN aknyk CAQS_CHICK : 28- 38: lnfpt YDGkDRVIdLN eknyk CAQS_HUMAN : 37- 47: ldfpe YDGvDRVInVN aknyk CAQS_RABIT : 37- 47: ldfpe YDGvDRVInVN aknyk CAQS_RANES : 31- 41: ldfpe YDGeDRVIhIS lknyk CAQS_RAT : 9- 19: ldfpe YDGvDRVInVA d K 11: 28.9591 8( 8) D-G-x-D-R-V-[IV]-x-[ILV]-[ANST] Occurences: 8(8) CAQC_CANFA : 29- 38: nfpty DGkDRVVsLT eknfk CAQC_RABIT : 29- 38: nfpty DGkDRVVsLS eknfk CAQS_CANFA : 10- 19: dfpey DGvDRVVnVN aknyk CAQS_CHICK : 29- 38: nfpty DGkDRVIdLN eknyk CAQS_HUMAN : 38- 47: dfpey DGvDRVInVN aknyk CAQS_RABIT : 38- 47: dfpey DGvDRVInVN aknyk CAQS_RANES : 32- 41: dfpey DGeDRVIhIS lknyk CAQS_RAT : 10- 19: dfpey DGvDRVInVA d L 12: 27.8960 10( 8) E-x-D-x(0,2)-G-[IV]-[DH]-x-V-x(2,4)-A-[DEK] Occurences: 10(8) CAQC_CANFA : 262- 275: mfetw EdDlnGIHiVaf--AE rsdpd CAQC_RABIT : 262- 275: mfetw EdDlnGIHiVpf--AE ksdpd CAQS_CANFA : 8- 21: gldfp EyD--GVDrVvnvnAK nyknv CAQS_CHICK : 262- 275: mfetw EdDmeGIHiVaf--AE eddpd CAQS_HUMAN : 36- 49: gldfp EyD--GVDrVinvnAK nyknv CAQS_HUMAN : 271- 284: myetw EdDmdGIHiVaf--AE eadpd CAQS_RABIT : 36- 49: gldfp EyD--GVDrVinvnAK nyknv CAQS_RABIT : 271- 284: myetw EdDmdGIHiVaf--AE eadpd CAQS_RANES : 265- 278: myetw EdDlnGIHiVaf--AE eddpd CAQS_RAT : 8- 20: gldfp EyD--GVDrVinv-AD M 13: 25.3036 9( 8) E-x(0,1)-D-G-x(3)-[APTV]-x-[NTV]-[LV]-[ANV]-[ADE] Occurences: 9(8) CAQC_CANFA : 124- 136: gdrti EfDGefaAdVLVE flldl CAQC_RABIT : 124- 136: gdrti EfDGefaAdVLVE flldl CAQS_CANFA : 8- 20: gldfp EyDGvdrVvNVNA knykn CAQS_CHICK : 124- 136: eerli EfDGelaTdVLVE flldl CAQS_HUMAN : 36- 48: gldfp EyDGvdrViNVNA knykn CAQS_RABIT : 36- 48: gldfp EyDGvdrViNVNA knykn CAQS_RABIT : 133- 145: edevi EyDGefsAdTLVE flldv CAQS_RANES : 127- 139: ddemi EyDGefsAdTLVE flldv CAQS_RAT : 8- 20: gldfp EyDGvdrViNVAD N 14: 24.7890 8( 8) G-x-D-R-V-[IV]-x-[ILV]-[ANST] Occurences: 8(8) CAQC_CANFA : 30- 38: fptyd GkDRVVsLT eknfk CAQC_RABIT : 30- 38: fptyd GkDRVVsLS eknfk CAQS_CANFA : 11- 19: fpeyd GvDRVVnVN aknyk CAQS_CHICK : 30- 38: fptyd GkDRVIdLN eknyk CAQS_HUMAN : 39- 47: fpeyd GvDRVInVN aknyk CAQS_RABIT : 39- 47: fpeyd GvDRVInVN aknyk CAQS_RANES : 33- 41: fpeyd GeDRVIhIS lknyk CAQS_RAT : 11- 19: fpeyd GvDRVInVA d O 15: 21.5266 8( 8) E-[FY]-D-G-x(3,5)-V-[ILV] Occurences: 8(8) CAQC_CANFA : 124- 134: gdrti EFDGefaadVL vefll CAQC_RABIT : 124- 134: gdrti EFDGefaadVL vefll CAQS_CANFA : 8- 16: gldfp EYDGvdr--VV nvnak CAQS_CHICK : 124- 134: eerli EFDGelatdVL vefll CAQS_HUMAN : 36- 44: gldfp EYDGvdr--VI nvnak CAQS_RABIT : 36- 44: gldfp EYDGvdr--VI nvnak CAQS_RANES : 30- 38: gldfp EYDGedr--VI hislk CAQS_RAT : 8- 16: gldfp EYDGvdr--VI nvad P 16: 21.5029 10( 8) L-D-[FLV]-[ILP]-E-x(0,1)-D Occurences: 10(8) CAQC_CANFA : 139- 144: lvefl LDLIE-D pveii CAQC_RABIT : 139- 144: lvefl LDLIE-D pveii CAQS_CANFA : 4- 10: eeg LDFPEyD gvdrv CAQS_CHICK : 139- 144: lvefl LDLLE-D pvevi CAQS_HUMAN : 32- 38: qgqeg LDFPEyD gvdrv CAQS_HUMAN : 148- 153: ivefl LDVLE-D pveli CAQS_RABIT : 32- 38: hgeeg LDFPEyD gvdrv CAQS_RABIT : 148- 153: lvefl LDVLE-D pveli CAQS_RANES : 142- 147: lvefl LDVLE-D pvefi CAQS_RAT : 4- 10: edg LDFPEyD gvdrv Q 17: 20.6190 8( 8) D-R-V-[IV]-x-[ILV]-[ANST] Occurences: 8(8) CAQC_CANFA : 32- 38: tydgk DRVVsLT eknfk CAQC_RABIT : 32- 38: tydgk DRVVsLS eknfk CAQS_CANFA : 13- 19: eydgv DRVVnVN aknyk CAQS_CHICK : 32- 38: tydgk DRVIdLN eknyk CAQS_HUMAN : 41- 47: eydgv DRVInVN aknyk CAQS_RABIT : 41- 47: eydgv DRVInVN aknyk CAQS_RANES : 35- 41: eydge DRVIhIS lknyk CAQS_RAT : 13- 19: eydgv DRVInVA d R 18: 18.4011 16( 8) V-x(0,1)-N-V-x(0,2)-A-[DK] Occurences: 16(8) CAQC_CANFA : 333- 340: kpqig VvNVtdAD svwme CAQC_CANFA : 334- 340: pqigv V-NVtdAD svwme CAQC_RABIT : 333- 340: kpqig VvNVtdAD svwme CAQC_RABIT : 334- 340: pqigv V-NVtdAD svwme CAQS_CANFA : 15- 21: dgvdr VvNVn-AK nyknv CAQS_CANFA : 16- 21: gvdrv V-NVn-AK nyknv CAQS_CHICK : 334- 340: pqigi V-NVtdAD svwme CAQS_HUMAN : 43- 49: dgvdr ViNVn-AK nyknv CAQS_HUMAN : 342- 349: apqig VvNVtdAD rlwme CAQS_HUMAN : 343- 349: pqigv V-NVtdAD rlwme CAQS_RABIT : 43- 49: dgvdr ViNVn-AK nyknv CAQS_RABIT : 342- 349: apqig VvNVtdAD svwme CAQS_RABIT : 343- 349: pqigv V-NVtdAD svwme CAQS_RANES : 336- 343: rphig VvNVtdAD svwmd CAQS_RANES : 337- 343: phigv V-NVtdAD svwmd CAQS_RAT : 15- 20: dgvdr ViNV--AD S 19: 17.9483 10( 8) D-[FL]-P-x(0,2)-E-x(1,3)-D Occurences: 10(8) CAQC_CANFA : 351- 360: ipddd DLPtaEeleD wiedv CAQC_RABIT : 351- 360: ipddd DLPtaEeleD wiedv CAQS_CANFA : 5- 10: eegl DFP--Ey--D gvdrv CAQS_CHICK : 351- 360: irddd DLPtaEeleD wiedv CAQS_HUMAN : 33- 38: gqegl DFP--Ey--D gvdrv CAQS_HUMAN : 360- 369: mddee DLPsaEeleD wledv CAQS_RABIT : 33- 38: geegl DFP--Ey--D gvdrv CAQS_RABIT : 360- 369: mddee DLPsaEeleD wledv CAQS_RANES : 27- 32: gedgl DFP--Ey--D gedrv CAQS_RAT : 5- 10: edgl DFP--Ey--D gvdrv T 20: 17.8980 11( 8) D-F-P-x(3)-[AGPT]-x(2)-[ER] Occurences: 11(8) CAQC_CANFA : 310- 319: widpd DFPllvAywE ktfki CAQC_RABIT : 310- 319: widpd DFPllvAywE ktfki CAQS_CANFA : 5- 14: eegl DFPeydGvdR vvnvn CAQS_CHICK : 310- 319: widpd DFPlliTywE ktfki CAQS_HUMAN : 33- 42: gqegl DFPeydGvdR vinvn CAQS_HUMAN : 319- 328: widpd DFPllvPywE ktfdi CAQS_RABIT : 33- 42: geegl DFPeydGvdR vinvn CAQS_RABIT : 319- 328: widpd DFPllvPywE ktfdi CAQS_RANES : 27- 36: gedgl DFPeydGedR vihis CAQS_RANES : 313- 322: widpe DFPlliPywE ekfgi CAQS_RAT : 5- 14: edgl DFPeydGvdR vinva Number of patterns evaluated by Pratt:1257 Total running time: 1 seconds