------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 14 sequences from file BROMODOMAIN_2 PATTERN CONSERVATION: CM: min Nr of Seqs to Match 14 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 36 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename BROMODOMAIN_2.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: BDF1_YEAST 687 BRM_DROME 1638 CBP_MOUSE 2441 CCG1_HUMAN 1872 FSH_DROME 2038 GCN5_YEAST 439 HRX_HUMAN 3969 RNG3_HUMAN 754 SNF2_YEAST 1703 SPT7_YEAST 1332 STH1_YEAST 1359 TBP7_YEAST 1206 YKY8_YEAST 625 YNJ1_CAEEL 2027 Pratt run started at Thu Feb 6 19:00:51 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 14.6802 21( 14) L-x(0,2)-L-x(5)-K-x(2,4)-K 2: 12.5102 38( 14) K-x(4)-K-x(2)-K 3: 12.5102 27( 14) L-x(5)-K-L 4: 12.0102 37( 14) K-x(0,1)-K-x(3)-E 5: 12.0102 61( 14) K-x(4)-K-x(1,2)-K 6: 12.0102 47( 14) K-x(4)-K-x(0,1)-K 7: 12.0102 55( 14) K-x(4,5)-K-x-K 8: 12.0102 26( 14) K-x(3,4)-L-E 9: 12.0102 24( 14) N-x(3,4)-Y-N 10: 12.0102 31( 14) E-x(2,3)-K-x(2)-K 11: 12.0102 35( 14) E-x(1,2)-K-x(4)-K 12: 12.0102 35( 14) E-x(2,3)-E-x(2)-K 13: 12.0102 33( 14) S-x(2)-E-x(3,4)-E 14: 12.0102 30( 14) S-x(4)-K-x(3,4)-K 15: 12.0102 31( 14) S-x(4,5)-K-x(4)-K 16: 12.0102 39( 14) D-x(3,4)-E-x(3)-E 17: 12.0102 37( 14) E-x(3,4)-L-x(5)-K 18: 12.0102 24( 14) K-x(4)-L-x(0,1)-S 19: 12.0102 22( 14) K-x(4)-L-x(1,2)-T 20: 12.0102 31( 14) K-x(4,5)-L-S Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 14.6802 21( 14) L-x(0,2)-L-x(5)-K-x(2,4)-K B 2: 13.6442 17( 14) K-x-[ADNPST]-x(2)-L-x(1,2)-T C 3: 12.5102 38( 14) K-x(4)-K-x(2)-K D 4: 12.5102 27( 14) L-x(5)-K-L E 5: 12.0102 37( 14) K-x(0,1)-K-x(3)-E F 6: 12.0102 61( 14) K-x(4)-K-x(1,2)-K G 7: 12.0102 47( 14) K-x(4)-K-x(0,1)-K H 8: 12.0102 55( 14) K-x(4,5)-K-x-K I 9: 12.0102 26( 14) K-x(3,4)-L-E J 10: 12.0102 24( 14) N-x(3,4)-Y-N K 11: 12.0102 31( 14) E-x(2,3)-K-x(2)-K L 12: 12.0102 35( 14) E-x(1,2)-K-x(4)-K M 13: 12.0102 35( 14) E-x(2,3)-E-x(2)-K N 14: 12.0102 33( 14) S-x(2)-E-x(3,4)-E O 15: 12.0102 30( 14) S-x(4)-K-x(3,4)-K P 16: 12.0102 31( 14) S-x(4,5)-K-x(4)-K Q 17: 12.0102 39( 14) D-x(3,4)-E-x(3)-E R 18: 12.0102 37( 14) E-x(3,4)-L-x(5)-K S 19: 12.0102 24( 14) K-x(4)-L-x(0,1)-S T 20: 12.0102 22( 14) K-x(4)-L-x(1,2)-T Best patterns with alignements: fitness hits(seqs) Pattern A 1: 14.6802 21( 14) L-x(0,2)-L-x(5)-K-x(2,4)-K Occurences: 21(14) BDF1_YEAST : 159- 169: qqkha L--LaikavKrl--K darpf BRM_DROME : 1036- 1048: qskgv L--LtdgseKgkhgK ggaka CBP_MOUSE : 652- 662: deyyh L--LaekiyKiq--K eleek CCG1_HUMAN : 995- 1009: gtdad LrrLslknaKqllrK fgvpe CCG1_HUMAN : 1231- 1244: riqeq LrrLkrnqeKekl-K gppek CCG1_HUMAN : 1474- 1487: isqsm Ld-LcdeklKekedK larle FSH_DROME : 39- 52: rntnq LqyLiktvmKviw-K hhfsw FSH_DROME : 145- 156: mpkee Le-LepvtaKgg--K kkqra FSH_DROME : 145- 157: mpkee Le-LepvtaKggk-K kqrap FSH_DROME : 145- 158: mpkee Le-LepvtaKggkkK qrapa FSH_DROME : 1687- 1698: kerdr Lk-LleaaeKek--K nqkea GCN5_YEAST : 117- 130: enmmv LtgLknifqKqlp-K mpkey HRX_HUMAN : 3545- 3556: tkrfq Lp-LdkgngKkh--K vshlr RNG3_HUMAN : 32- 45: rvtnq LqyLhkvvmKalw-K hqfaw RNG3_HUMAN : 657- 671: leryv LscLrkkprKpytiK kpvgk SNF2_YEAST : 992- 1006: lrpfl LrrLkkdveKelpdK vekvv SPT7_YEAST : 278- 291: dderr Lv-LnisisKetlsK lktnn SPT7_YEAST : 420- 433: isdye LkhLimdvrKnrs-K wtsde STH1_YEAST : 695- 709: lrpfl LrrLkkeveKdlpdK vekvi TBP7_YEAST : 985- 998: iklsg LmdLfknryKrfr-K ppidd YKY8_YEAST : 194- 206: kinqa L--LgasspKnlddK vklse YNJ1_CAEEL : 632- 644: mndnr LkdLiayarKve--K emfes YNJ1_CAEEL : 659- 669: eeyyh L--LaekiyKiq--K elqek B 2: 13.6442 17( 14) K-x-[ADNPST]-x(2)-L-x(1,2)-T Occurences: 17(14) BDF1_YEAST : 193- 200: yfnyi KrPmdLs-T ierkl BDF1_YEAST : 360- 367: yfdyv KePmdLg-T iakkl BRM_DROME : 871- 878: qmrat KfNvlLt-T yeyvi BRM_DROME : 911- 918: knhhc KlTqvLn-T hyiap CBP_MOUSE : 1131- 1138: yfdiv KnPmdLs-T ikrkl CCG1_HUMAN : 865- 872: nwwvl KsDfrLp-T eeeir FSH_DROME : 522- 529: yhdii KkPmdLg-T vkrkm GCN5_YEAST : 369- 376: yydfi KePmdLs-T meikl HRX_HUMAN : 971- 979: rgnle KtNldLgpT apsle RNG3_HUMAN : 344- 351: yhdii KhPmdLs-T vkrkm SNF2_YEAST : 837- 844: ssefa KwAptLr-T isfkg SNF2_YEAST : 905- 912: knaqs KlSltLn-T hyhad SPT7_YEAST : 483- 490: yhqii KkSmdLn-T vlkkl STH1_YEAST : 540- 547: tlefe KwApsLn-T iiykg TBP7_YEAST : 600- 607: qiqtr KwSspLs-T nfidk YKY8_YEAST : 520- 527: ltssl KdTetLl-T inkep YNJ1_CAEEL : 908- 915: yheii KrPmdLe-T vhkkl C 3: 12.5102 38( 14) K-x(4)-K-x(2)-K Occurences: 38(14) BDF1_YEAST : 481- 489: lqqlk KqeleKirK errla BDF1_YEAST : 516- 524: knass KgrrdKknK lktvv BRM_DROME : 581- 589: eegyr KlidqKkdK rlafl BRM_DROME : 1396- 1404: ddskr KrrkrKnrK eesdd CBP_MOUSE : 1584- 1592: sqgds KnakkKnnK ktnkn CBP_MOUSE : 1588- 1596: sknak KknnkKtnK nkssi CBP_MOUSE : 1737- 1745: ncynt KshthKmvK wglgl CCG1_HUMAN : 971- 979: vkipn KptqqKddK epqpv CCG1_HUMAN : 1244- 1252: ekekl KgppeKkpK kmker CCG1_HUMAN : 1339- 1347: devrr KslvlKfpK qqlpp FSH_DROME : 681- 689: eeasa KkkakKklK ekkks FSH_DROME : 1706- 1714: keaae KeqqrKhhK sssss GCN5_YEAST : 48- 56: qegtd KenkgKfeK eteri GCN5_YEAST : 380- 388: stmei KlesnKyqK medfi HRX_HUMAN : 249- 257: lpkgn KedslKkiK rtpsa HRX_HUMAN : 381- 389: lqrak KgaqkKieK eaaql HRX_HUMAN : 1031- 1039: llkka KaqlcKieK skslk HRX_HUMAN : 1036- 1044: kaqlc KieksKslK qtdqp HRX_HUMAN : 1185- 1193: ggrni KkqccKmrK cqnlq HRX_HUMAN : 1203- 1211: qwmps KaylqKqaK avkkk HRX_HUMAN : 1211- 1219: lqkqa KavkkKekK sktse HRX_HUMAN : 1221- 1229: kekks KtsekKdsK essvv HRX_HUMAN : 2299- 2307: sdlvs KssslKgeK tkvls RNG3_HUMAN : 146- 154: vvtip KnshkKgaK laalq RNG3_HUMAN : 499- 507: piskp KrkreKkeK kkkrk RNG3_HUMAN : 504- 512: krkre KkekkKkrK aekhr RNG3_HUMAN : 507- 515: rekke KkkkrKaeK hrgra SNF2_YEAST : 1001- 1009: kkdve KelpdKveK vvkck SNF2_YEAST : 1386- 1394: dkqar KqrtkKedK seaid SPT7_YEAST : 315- 323: sfeyd KetmiKrlK leesd SPT7_YEAST : 1199- 1207: dyers KayiaKqsK ssand STH1_YEAST : 704- 712: kkeve KdlpdKveK vikck STH1_YEAST : 992- 1000: rsade KilfdKidK ermnq STH1_YEAST : 1235- 1243: skspa KktaaKktK tksks TBP7_YEAST : 385- 393: tpktk KentqKkkK kkpei YKY8_YEAST : 20- 28: sderp KylpgKhpK nqekt YNJ1_CAEEL : 1377- 1385: ggdsg KkkssKnkK nnlkk YNJ1_CAEEL : 1385- 1393: ssknk KnnlkKnaK mnkkk D 4: 12.5102 27( 14) L-x(5)-K-L Occurences: 27(14) BDF1_YEAST : 198- 205: krpmd LstierKL nvgay BDF1_YEAST : 365- 372: kepmd LgtiakKL ndwqy BRM_DROME : 1103- 1110: gkfel LdrilpKL katnh BRM_DROME : 1233- 1240: veeri LaaaryKL nmdek BRM_DROME : 1447- 1454: qdgrt LsepfmKL psrqr CBP_MOUSE : 1136- 1143: knpmd LstikrKL dtgqy CCG1_HUMAN : 1474- 1481: isqsm LdlcdeKL keked CCG1_HUMAN : 1481- 1488: lcdek LkekedKL arlek FSH_DROME : 657- 664: ersar LkmlesKL lglqe FSH_DROME : 667- 674: skllg LqeeirKL seeas FSH_DROME : 960- 967: dekrq LsldinKL pgdkl GCN5_YEAST : 374- 381: kepmd LstmeiKL esnky HRX_HUMAN : 1555- 1562: shdfs LchdcaKL fakgn HRX_HUMAN : 2037- 2044: gilnd LsdcedKL fpigy HRX_HUMAN : 2200- 2207: hstss LspqrsKL rimsp HRX_HUMAN : 3071- 3078: ttpph LkpateKL ivvnq RNG3_HUMAN : 603- 610: dekrq LsldinKL pgekl SNF2_YEAST : 1092- 1099: gkfel LdrilpKL katgh SNF2_YEAST : 1222- 1229: veevi LeraykKL didgk SPT7_YEAST : 18- 25: tnaka LlklteKL fnknf SPT7_YEAST : 488- 495: kksmd LntvlkKL ksfqy SPT7_YEAST : 1070- 1077: kktkk LqdikqKL esflr STH1_YEAST : 926- 933: veevi LeramqKL didgk TBP7_YEAST : 699- 706: lladq LnnlknKL dymln YKY8_YEAST : 175- 182: evkak LlhylnKL vdate YNJ1_CAEEL : 873- 880: dlikf LlpvweKL dksed YNJ1_CAEEL : 913- 920: krpmd LetvhkKL yagqy E 5: 12.0102 37( 14) K-x(0,1)-K-x(3)-E Occurences: 37(14) BDF1_YEAST : 480- 485: elqql K-KqelE kirke BRM_DROME : 618- 623: kddqm K-KkeeE gkrli BRM_DROME : 1310- 1315: mdaer K-KedeE ihpgr BRM_DROME : 1399- 1405: krkrr KrKnrkE esddd CBP_MOUSE : 65- 71: pdaas KhKqlsE llrgg CBP_MOUSE : 1496- 1502: dqkip KpKrlqE wykkm CCG1_HUMAN : 263- 268: arrkr K-KkhrE liqee CCG1_HUMAN : 943- 949: fiaam KgKcllE vtgva CCG1_HUMAN : 1242- 1248: nqeke KlKgppE kkpkk CCG1_HUMAN : 1250- 1256: gppek KpKkmkE rpdlk FSH_DROME : 685- 690: akkka K-KklkE kkksi FSH_DROME : 1037- 1042: eqmae K-KqelE krlqd FSH_DROME : 1697- 1702: aaeke K-KnqkE aaeke GCN5_YEAST : 51- 57: tdken KgKfekE terig GCN5_YEAST : 427- 433: kffnn KvKeipE yshli HRX_HUMAN : 385- 390: kkgaq K-KiekE aaqlq HRX_HUMAN : 851- 857: ergrn KdKapeE lskdr HRX_HUMAN : 892- 898: esrke KrKkgsE iqsss HRX_HUMAN : 913- 919: vgrvs KeKvvgE dvats HRX_HUMAN : 1225- 1230: sktse K-KdskE ssvvk HRX_HUMAN : 1255- 1260: edpap K-KsssE ppprk HRX_HUMAN : 1828- 1834: iipap KpKgpgE pdspt HRX_HUMAN : 2430- 2435: rrqkg K-KsckE tfkek HRX_HUMAN : 3824- 3829: rfrhl K-KtskE avgvy RNG3_HUMAN : 497- 503: qgpis KpKrkrE kkekk RNG3_HUMAN : 508- 514: ekkek KkKrkaE khrgr RNG3_HUMAN : 509- 514: kkekk K-KrkaE khrgr RNG3_HUMAN : 685- 690: elale K-KrelE krlqd SNF2_YEAST : 391- 396: tqtes K-KeenE tisnv SNF2_YEAST : 1453- 1458: prgrp K-KvklE gsens SPT7_YEAST : 1158- 1163: tkvqa K-KiqpE esdsi STH1_YEAST : 238- 244: rmdtf KiKalvE lkslk STH1_YEAST : 1041- 1046: ieehf K-KedsE plgri TBP7_YEAST : 391- 397: entqk KkKkkpE iadld TBP7_YEAST : 392- 397: ntqkk K-KkkpE iadld YKY8_YEAST : 5- 11: mvvk KrKlatE aggsd YNJ1_CAEEL : 1088- 1093: calhd K-KvypE gfice F 6: 12.0102 61( 14) K-x(4)-K-x(1,2)-K Occurences: 61(14) BDF1_YEAST : 481- 489: lqqlk KqeleKirK errla BDF1_YEAST : 516- 524: knass KgrrdKknK lktvv BRM_DROME : 581- 589: eegyr KlidqKkdK rlafl BRM_DROME : 613- 620: mvkqh KddqmKk-K eeegk BRM_DROME : 730- 737: ndeda KdlitKa-K vedde BRM_DROME : 1394- 1401: eedds KrkrrKr-K nrkee BRM_DROME : 1396- 1404: ddskr KrrkrKnrK eesdd CBP_MOUSE : 1265- 1272: qttis KdqfeKk-K ndtld CBP_MOUSE : 1584- 1592: sqgds KnakkKnnK ktnkn CBP_MOUSE : 1588- 1596: sknak KknnkKtnK nkssi CBP_MOUSE : 1737- 1745: ncynt KshthKmvK wglgl CCG1_HUMAN : 641- 648: vqpll KhikkKa-K mreqe CCG1_HUMAN : 971- 979: vkipn KptqqKddK epqpv CCG1_HUMAN : 1235- 1242: qlrrl KrnqeKe-K lkgpp CCG1_HUMAN : 1244- 1252: ekekl KgppeKkpK kmker CCG1_HUMAN : 1339- 1347: devrr KslvlKfpK qqlpp FSH_DROME : 681- 689: eeasa KkkakKklK ekkks FSH_DROME : 682- 689: easak KkakkKl-K ekkks FSH_DROME : 686- 693: kkkak KklkeKk-K siggg FSH_DROME : 1023- 1030: rkkth KkpsgKs-K deqma FSH_DROME : 1706- 1714: keaae KeqqrKhhK sssss GCN5_YEAST : 48- 56: qegtd KenkgKfeK eteri GCN5_YEAST : 380- 388: stmei KlesnKyqK medfi GCN5_YEAST : 422- 429: anrle KffnnKv-K eipey HRX_HUMAN : 249- 257: lpkgn KedslKkiK rtpsa HRX_HUMAN : 277- 284: klrag KlsplKs-K fktgk HRX_HUMAN : 381- 389: lqrak KgaqkKieK eaaql HRX_HUMAN : 885- 892: reken KresrKe-K rkkgs HRX_HUMAN : 1031- 1039: llkka KaqlcKieK skslk HRX_HUMAN : 1036- 1044: kaqlc KieksKslK qtdqp HRX_HUMAN : 1185- 1193: ggrni KkqccKmrK cqnlq HRX_HUMAN : 1203- 1211: qwmps KaylqKqaK avkkk HRX_HUMAN : 1211- 1218: lqkqa KavkkKe-K kskts HRX_HUMAN : 1211- 1219: lqkqa KavkkKekK sktse HRX_HUMAN : 1214- 1221: qakav KkkekKs-K tsekk HRX_HUMAN : 1221- 1229: kekks KtsekKdsK essvv HRX_HUMAN : 2299- 2307: sdlvs KssslKgeK tkvls HRX_HUMAN : 3549- 3556: qlpld KgngkKh-K vshlr RNG3_HUMAN : 146- 154: vvtip KnshkKgaK laalq RNG3_HUMAN : 228- 235: aqpla KkkgvKr-K adttt RNG3_HUMAN : 499- 507: piskp KrkreKkeK kkkrk RNG3_HUMAN : 504- 512: krkre KkekkKkrK aekhr RNG3_HUMAN : 505- 512: rkrek KekkkKr-K aekhr RNG3_HUMAN : 507- 515: rekke KkkkrKaeK hrgra RNG3_HUMAN : 671- 678: kpyti KkpvgKt-K eelal SNF2_YEAST : 646- 653: erdeq KraekKa-K erlqa SNF2_YEAST : 1001- 1009: kkdve KelpdKveK vvkck SNF2_YEAST : 1386- 1394: dkqar KqrtkKedK seaid SPT7_YEAST : 286- 293: nisis KetlsKl-K tnnve SPT7_YEAST : 315- 323: sfeyd KetmiKrlK leesd SPT7_YEAST : 1069- 1076: gkktk KlqdiKq-K lesfl SPT7_YEAST : 1199- 1207: dyers KayiaKqsK ssand STH1_YEAST : 704- 712: kkeve KdlpdKveK vikck STH1_YEAST : 992- 1000: rsade KilfdKidK ermnq STH1_YEAST : 1235- 1243: skspa KktaaKktK tksks STH1_YEAST : 1236- 1243: kspak KtaakKt-K tksks STH1_YEAST : 1240- 1247: kktaa KktktKs-K slgif TBP7_YEAST : 385- 392: tpktk KentqKk-K kkkpe TBP7_YEAST : 385- 393: tpktk KentqKkkK kkpei YKY8_YEAST : 20- 28: sderp KylpgKhpK nqekt YKY8_YEAST : 201- 208: gassp KnlddKv-K lsepf YNJ1_CAEEL : 1377- 1384: ggdsg KkkssKn-K knnlk YNJ1_CAEEL : 1377- 1385: ggdsg KkkssKnkK nnlkk YNJ1_CAEEL : 1385- 1393: ssknk KnnlkKnaK mnkkk G 7: 12.0102 47( 14) K-x(4)-K-x(0,1)-K Occurences: 47(14) BDF1_YEAST : 327- 333: cqsvl KelmaK-K hasyn BDF1_YEAST : 516- 522: knass KgrrdK-K nklkt BRM_DROME : 581- 587: eegyr KlidqK-K dkrla BRM_DROME : 613- 619: mvkqh KddqmK-K keeeg BRM_DROME : 613- 620: mvkqh KddqmKkK eeegk BRM_DROME : 730- 737: ndeda KdlitKaK vedde BRM_DROME : 1394- 1401: eedds KrkrrKrK nrkee CBP_MOUSE : 1265- 1271: qttis KdqfeK-K kndtl CBP_MOUSE : 1265- 1272: qttis KdqfeKkK ndtld CBP_MOUSE : 1587- 1593: dskna KkknnK-K tnknk CCG1_HUMAN : 531- 537: skesk KesslK-K srill CCG1_HUMAN : 641- 648: vqpll KhikkKaK mreqe CCG1_HUMAN : 1235- 1242: qlrrl KrnqeKeK lkgpp CCG1_HUMAN : 1244- 1250: ekekl KgppeK-K pkkmk FSH_DROME : 489- 495: cneil KelfsK-K hsgya FSH_DROME : 681- 687: eeasa KkkakK-K lkekk FSH_DROME : 682- 689: easak KkakkKlK ekkks FSH_DROME : 686- 692: kkkak KklkeK-K ksigg FSH_DROME : 686- 693: kkkak KklkeKkK siggg FSH_DROME : 687- 693: kkakk KlkekK-K siggg FSH_DROME : 1023- 1030: rkkth KkpsgKsK deqma GCN5_YEAST : 422- 429: anrle KffnnKvK eipey HRX_HUMAN : 249- 255: lpkgn KedslK-K ikrtp HRX_HUMAN : 277- 284: klrag KlsplKsK fktgk HRX_HUMAN : 380- 386: llqra KkgaqK-K iekea HRX_HUMAN : 885- 892: reken KresrKeK rkkgs HRX_HUMAN : 929- 935: sssak KatgrK-K ssshd HRX_HUMAN : 1211- 1218: lqkqa KavkkKeK kskts HRX_HUMAN : 1214- 1221: qakav KkkekKsK tsekk HRX_HUMAN : 1517- 1523: pnypt KptkkK-K vwict HRX_HUMAN : 3549- 3556: qlpld KgngkKhK vshlr RNG3_HUMAN : 228- 235: aqpla KkkgvKrK adttt RNG3_HUMAN : 311- 317: cngil KellsK-K haaya RNG3_HUMAN : 499- 505: piskp KrkreK-K ekkkk RNG3_HUMAN : 504- 510: krkre KkekkK-K rkaek RNG3_HUMAN : 505- 512: rkrek KekkkKrK aekhr RNG3_HUMAN : 666- 672: rkkpr KpytiK-K pvgkt RNG3_HUMAN : 671- 678: kpyti KkpvgKtK eelal SNF2_YEAST : 646- 653: erdeq KraekKaK erlqa SPT7_YEAST : 286- 293: nisis KetlsKlK tnnve SPT7_YEAST : 1069- 1076: gkktk KlqdiKqK lesfl STH1_YEAST : 1235- 1241: skspa KktaaK-K tktks STH1_YEAST : 1236- 1243: kspak KtaakKtK tksks STH1_YEAST : 1240- 1247: kktaa KktktKsK slgif TBP7_YEAST : 385- 391: tpktk KentqK-K kkkkp TBP7_YEAST : 385- 392: tpktk KentqKkK kkkpe YKY8_YEAST : 201- 208: gassp KnlddKvK lsepf YNJ1_CAEEL : 669- 675: iykiq KelqeK-K nsrln YNJ1_CAEEL : 1377- 1384: ggdsg KkkssKnK knnlk YNJ1_CAEEL : 1379- 1385: dsgkk KssknK-K nnlkk YNJ1_CAEEL : 1384- 1390: ksskn KknnlK-K nakmn H 8: 12.0102 55( 14) K-x(4,5)-K-x-K Occurences: 55(14) BDF1_YEAST : 516- 524: knass KgrrdkKnK lktvv BRM_DROME : 581- 589: eegyr KlidqkKdK rlafl BRM_DROME : 613- 620: mvkqh Kddqm-KkK eeegk BRM_DROME : 730- 737: ndeda Kdlit-KaK vedde BRM_DROME : 1394- 1401: eedds Krkrr-KrK nrkee CBP_MOUSE : 1265- 1272: qttis Kdqfe-KkK ndtld CCG1_HUMAN : 641- 648: vqpll Khikk-KaK mreqe CCG1_HUMAN : 699- 707: vgmat KiknyyKrK pgkdp CCG1_HUMAN : 1235- 1242: qlrrl Krnqe-KeK lkgpp CCG1_HUMAN : 1244- 1252: ekekl KgppekKpK kmker CCG1_HUMAN : 1255- 1263: kpkkm KerpdlKlK cgacg CCG1_HUMAN : 1347- 1355: vlkfp KqqlppKkK rrvgt FSH_DROME : 393- 401: pqqpa KikkgvKrK adttt FSH_DROME : 681- 689: eeasa KkkakkKlK ekkks FSH_DROME : 682- 689: easak Kkakk-KlK ekkks FSH_DROME : 683- 691: asakk KakkklKeK kksig FSH_DROME : 685- 693: akkka KkklkeKkK siggg FSH_DROME : 686- 693: kkkak Kklke-KkK siggg FSH_DROME : 1023- 1030: rkkth Kkpsg-KsK deqma GCN5_YEAST : 422- 429: anrle Kffnn-KvK eipey HRX_HUMAN : 205- 213: nkset KsgdkiKkK dsksi HRX_HUMAN : 249- 257: lpkgn KedslkKiK rtpsa HRX_HUMAN : 277- 284: klrag Klspl-KsK fktgk HRX_HUMAN : 326- 334: nsele KpqkvrKdK egtpp HRX_HUMAN : 885- 892: reken Kresr-KeK rkkgs HRX_HUMAN : 1208- 1216: kaylq KqakavKkK ekksk HRX_HUMAN : 1211- 1218: lqkqa Kavkk-KeK kskts HRX_HUMAN : 1214- 1221: qakav Kkkek-KsK tsekk HRX_HUMAN : 1356- 1364: psipv KqkpkeKeK pppvn HRX_HUMAN : 1822- 1830: pplmk KiipapKpK gpgep HRX_HUMAN : 3549- 3556: qlpld Kgngk-KhK vshlr RNG3_HUMAN : 228- 235: aqpla Kkkgv-KrK adttt RNG3_HUMAN : 499- 507: piskp KrkrekKeK kkkrk RNG3_HUMAN : 501- 509: skpkr KrekkeKkK krkae RNG3_HUMAN : 504- 512: krkre KkekkkKrK aekhr RNG3_HUMAN : 505- 512: rkrek Kekkk-KrK aekhr RNG3_HUMAN : 671- 678: kpyti Kkpvg-KtK eelal SNF2_YEAST : 646- 653: erdeq Kraek-KaK erlqa SNF2_YEAST : 1006- 1014: kelpd KvekvvKcK msalq SPT7_YEAST : 286- 293: nisis Ketls-KlK tnnve SPT7_YEAST : 329- 337: leesd KmiekgKkK rsrsd SPT7_YEAST : 1068- 1076: fgkkt KklqdiKqK lesfl SPT7_YEAST : 1069- 1076: gkktk Klqdi-KqK lesfl SPT7_YEAST : 1248- 1256: lpptg KisttyKkK piasa STH1_YEAST : 709- 717: kdlpd KvekviKcK lsglq STH1_YEAST : 1201- 1209: eskkk KpkltvKiK lnktt STH1_YEAST : 1235- 1243: skspa KktaakKtK tksks STH1_YEAST : 1236- 1243: kspak Ktaak-KtK tksks STH1_YEAST : 1240- 1247: kktaa Kktkt-KsK slgif TBP7_YEAST : 384- 392: vtpkt KkentqKkK kkkpe TBP7_YEAST : 385- 392: tpktk Kentq-KkK kkkpe TBP7_YEAST : 385- 393: tpktk KentqkKkK kkpei TBP7_YEAST : 957- 965: eplse KvvlrrKlK sfqhq YKY8_YEAST : 201- 208: gassp Knldd-KvK lsepf YNJ1_CAEEL : 1377- 1384: ggdsg Kkkss-KnK knnlk YNJ1_CAEEL : 1390- 1398: knnlk KnakmnKkK agsit I 9: 12.0102 26( 14) K-x(3,4)-L-E Occurences: 26(14) BDF1_YEAST : 480- 485: elqql Kkqe-LE kirke BRM_DROME : 499- 504: tekle Kqqk-LE aerkr CBP_MOUSE : 659- 665: aekiy KiqkeLE ekrrt CCG1_HUMAN : 943- 949: fiaam KgkclLE vtgva CCG1_HUMAN : 1487- 1492: keked Klar-LE kainp CCG1_HUMAN : 1622- 1627: dicta Keaa-LE eaele FSH_DROME : 142- 148: iesmp KeeleLE pvtak FSH_DROME : 1037- 1042: eqmae Kkqe-LE krlqd GCN5_YEAST : 22- 27: tdpev Krvk-LE nnvee GCN5_YEAST : 415- 421: ntsyy KyanrLE kffnn HRX_HUMAN : 439- 444: ydppi Kiar-LE stpns HRX_HUMAN : 964- 970: kilik KgrgnLE ktnld HRX_HUMAN : 2009- 2015: islrr KflngLE penih RNG3_HUMAN : 678- 684: pvgkt KeelaLE kkrel RNG3_HUMAN : 685- 690: elale Kkre-LE krlqd SNF2_YEAST : 1314- 1319: eelgv Ksrl-LE kselp SNF2_YEAST : 1453- 1458: prgrp Kkvk-LE gsens SPT7_YEAST : 320- 325: ketmi Krlk-LE esdkm SPT7_YEAST : 786- 792: lfley KeqkaLE syrqk STH1_YEAST : 70- 75: iqnhp Kenk-LE ikaie STH1_YEAST : 170- 175: fnaka Kslg-LE skfsn STH1_YEAST : 1212- 1217: kikln Kttv-LE nndgk TBP7_YEAST : 51- 57: yaeie KvfdfLE ddqvm YKY8_YEAST : 410- 415: tsdie Ktns-LE sehlk YNJ1_CAEEL : 908- 914: yheii KrpmdLE tvhkk YNJ1_CAEEL : 1122- 1128: klphn KlstfLE drvng J 10: 12.0102 24( 14) N-x(3,4)-Y-N Occurences: 24(14) BDF1_YEAST : 83- 89: atlaa NgengYN atgsg BRM_DROME : 1501- 1506: mqlcq Naqi-YN eeasl CBP_MOUSE : 1163- 1169: vrlmf NnawlYN rktsr CBP_MOUSE : 1164- 1169: rlmfn Nawl-YN rktsr CCG1_HUMAN : 444- 449: ssmtr Nama-YN vqqgf CCG1_HUMAN : 1455- 1460: elivk Nsat-YN gpkhs CCG1_HUMAN : 1578- 1583: nlila Nsvk-YN gpesq FSH_DROME : 110- 116: fntmf NncyvYN kpged FSH_DROME : 111- 116: ntmfn Ncyv-YN kpged FSH_DROME : 555- 560: rlift Ncyk-YN ppdhd GCN5_YEAST : 401- 407: arlvf NncrmYN gents GCN5_YEAST : 402- 407: rlvfn Ncrm-YN gents HRX_HUMAN : 2819- 2825: tpsdk NlldtYN tellk RNG3_HUMAN : 104- 109: ntmft Ncyi-YN kptdd RNG3_HUMAN : 377- 382: rlmfs Ncyk-YN ppdhd SNF2_YEAST : 741- 746: dddns Nvdy-YN vahri SNF2_YEAST : 1626- 1631: hlifs Nari-YN tegsv SPT7_YEAST : 516- 521: mliwk Nclt-YN sdpsh SPT7_YEAST : 946- 951: pnafl Nnhi-YN ytiid STH1_YEAST : 1328- 1333: qtmfe Narf-YN eegsw TBP7_YEAST : 344- 349: tifgk Ntnf-YN qvpsa YKY8_YEAST : 129- 134: elltk Ncqa-YN eydsl YNJ1_CAEEL : 941- 946: wlmld Nawl-YN rknsk YNJ1_CAEEL : 1958- 1963: ggmqq Nanp-YN qfqnr K 11: 12.0102 31( 14) E-x(2,3)-K-x(2)-K Occurences: 31(14) BDF1_YEAST : 483- 489: qlkkq Ele-KirK errla BRM_DROME : 495- 502: earat EkleKqqK leaer BRM_DROME : 1042- 1048: ltdgs Ekg-KhgK ggaka CBP_MOUSE : 655- 662: yhlla EkiyKiqK eleek CCG1_HUMAN : 1248- 1255: lkgpp EkkpKkmK erpdl FSH_DROME : 1691- 1698: rlkll EaaeKekK nqkea FSH_DROME : 1694- 1701: lleaa EkekKnqK eaaek FSH_DROME : 1707- 1714: eaaek EqqrKhhK sssss GCN5_YEAST : 44- 51: etnkq EgtdKenK gkfek GCN5_YEAST : 49- 56: egtdk EnkgKfeK eteri GCN5_YEAST : 382- 388: meikl Esn-KyqK medfi HRX_HUMAN : 243- 249: gkdis Elp-KgnK edslk HRX_HUMAN : 250- 257: pkgnk EdslKkiK rtpsa HRX_HUMAN : 323- 329: llins Ele-KpqK vrkdk HRX_HUMAN : 325- 332: insel EkpqKvrK dkegt HRX_HUMAN : 879- 885: rerdr Ere-KenK resrk HRX_HUMAN : 1038- 1044: qlcki Eks-KslK qtdqp HRX_HUMAN : 1340- 1346: pesgp Eqs-KqkK vaprp RNG3_HUMAN : 503- 510: pkrkr EkkeKkkK rkaek RNG3_HUMAN : 506- 512: krekk Ekk-KkrK aekhr SNF2_YEAST : 853- 860: kgspn ErkaKqaK irage SNF2_YEAST : 1002- 1009: kdvek ElpdKveK vvkck SPT7_YEAST : 215- 222: eekee EeigKneK pqnke SPT7_YEAST : 216- 222: ekeee Eig-KneK pqnke SPT7_YEAST : 316- 323: feydk EtmiKrlK leesd SPT7_YEAST : 754- 760: clkrt Eyf-KngK lnsds SPT7_YEAST : 1062- 1068: syves Efg-KktK klqdi SPT7_YEAST : 1062- 1069: syves EfgkKtkK lqdik STH1_YEAST : 1196- 1203: iings EskkKkpK ltvki TBP7_YEAST : 386- 393: pktkk EntqKkkK kkpei YKY8_YEAST : 417- 423: nsles Ehl-KipK ynvik YNJ1_CAEEL : 662- 669: yhlla EkiyKiqK elqek L 12: 12.0102 35( 14) E-x(1,2)-K-x(4)-K Occurences: 35(14) BDF1_YEAST : 306- 313: diypy Es-KkpksK rlqqa BRM_DROME : 727- 735: atgnd EdaKdlitK akved CBP_MOUSE : 1050- 1057: epmev Ee-KkpevK veake CBP_MOUSE : 1502- 1510: pkrlq EwyKkmldK afaer CCG1_HUMAN : 419- 427: iiwdg EdvKhkgtK pqras CCG1_HUMAN : 528- 536: nspsk EskKesslK ksril CCG1_HUMAN : 1241- 1249: rnqek EklKgppeK kpkkm CCG1_HUMAN : 1248- 1255: lkgpp Ek-KpkkmK erpdl CCG1_HUMAN : 1314- 1322: hndne EliKvegtK ivlgk CCG1_HUMAN : 1319- 1327: elikv EgtKivlgK qlies CCG1_HUMAN : 1479- 1487: ldlcd EklKekedK larle FSH_DROME : 486- 494: lkscn EilKelfsK khsgy FSH_DROME : 1036- 1043: deqma Ek-KqeleK rlqdv GCN5_YEAST : 49- 56: egtdk En-KgkfeK eteri GCN5_YEAST : 378- 385: dlstm Ei-KlesnK yqkme HRX_HUMAN : 883- 890: rerek En-KresrK ekrkk HRX_HUMAN : 887- 895: kenkr EsrKekrkK gseiq HRX_HUMAN : 2306- 2314: sslkg EktKvlssK ssegs RNG3_HUMAN : 503- 510: pkrkr Ek-KekkkK rkaek RNG3_HUMAN : 684- 691: eelal Ek-KreleK rlqdv SNF2_YEAST : 590- 598: lyknh EllKlerkK teava SNF2_YEAST : 644- 651: nlerd Eq-KraekK akerl SNF2_YEAST : 853- 860: kgspn Er-KakqaK irage SNF2_YEAST : 1643- 1651: yedsl EleKvvtkK yceim SPT7_YEAST : 312- 320: iyhsf EydKetmiK rlkle SPT7_YEAST : 1152- 1159: qtvdg Et-KvqakK iqpee SPT7_YEAST : 1196- 1204: lqkdy ErsKayiaK qskss STH1_YEAST : 701- 709: rrlkk EveKdlpdK vekvi STH1_YEAST : 1196- 1203: iings Es-KkkkpK ltvki STH1_YEAST : 1229- 1236: aeekp Es-KspakK taakk TBP7_YEAST : 269- 277: krflr ErtKpvnyK lpppl YKY8_YEAST : 17- 25: aggsd ErpKylpgK hpknq YKY8_YEAST : 154- 162: mlief EvlKaknlK rnyli YNJ1_CAEEL : 1070- 1078: dyepf ErcKycmrK whric YNJ1_CAEEL : 1281- 1288: hchpp Eq-KipkpK rlqdw M 13: 12.0102 35( 14) E-x(2,3)-E-x(2)-K Occurences: 35(14) BDF1_YEAST : 114- 121: qgtkq EdldEnsK qelpm BDF1_YEAST : 123- 130: enskq ElpmEvpK epapa BRM_DROME : 1296- 1303: miars EeeiEifK rmdae BRM_DROME : 1297- 1303: iarse Eei-EifK rmdae CBP_MOUSE : 1558- 1565: sikel EqeeEerK keest CBP_MOUSE : 1560- 1566: keleq Eee-ErkK eesta CCG1_HUMAN : 1057- 1063: rfsva Ehq-EryK eecqr CCG1_HUMAN : 1298- 1305: vamte EqeeEleK tvihn FSH_DROME : 995- 1002: npdei EidfEtlK pstlr FSH_DROME : 1036- 1043: deqma EkkqEleK rlqdv FSH_DROME : 1691- 1697: rlkll Eaa-EkeK knqke GCN5_YEAST : 36- 42: eeiqp Eqa-EtnK qegtd GCN5_YEAST : 378- 385: dlstm EiklEsnK yqkme HRX_HUMAN : 875- 882: kdksr ErdrEreK enkre HRX_HUMAN : 883- 890: rerek EnkrEsrK ekrkk HRX_HUMAN : 887- 894: kenkr EsrkEkrK kgsei HRX_HUMAN : 1336- 1343: qpppp EsgpEqsK qkkva HRX_HUMAN : 2747- 2754: krngk EngtEnlK idrpe RNG3_HUMAN : 503- 509: pkrkr Ekk-EkkK krkae RNG3_HUMAN : 638- 645: npeei EidfEtlK pstlr RNG3_HUMAN : 684- 691: eelal EkkrEleK rlqdv SNF2_YEAST : 251- 257: tmfta Eqs-EllK aqits SNF2_YEAST : 1273- 1279: resgv Eee-EelK dsein SNF2_YEAST : 1639- 1646: gsvvy EdslEleK vvtkk SPT7_YEAST : 213- 219: dveek Eee-EigK nekpq SPT7_YEAST : 562- 568: lekei Edm-EkdK dyeld SPT7_YEAST : 626- 633: tsvip EgekEkdK tasst SPT7_YEAST : 649- 655: nvnkn Eik-EngK neeqd STH1_YEAST : 1034- 1041: pkvfr EdieEhfK kedse STH1_YEAST : 1348- 1355: adkln EftdEwfK ehss TBP7_YEAST : 146- 153: defed EyldEdsK dnnrr TBP7_YEAST : 736- 742: eeysg Eee-EhdK yggne TBP7_YEAST : 1148- 1155: enilq EpdlEdnK anefg YKY8_YEAST : 305- 312: lnerg EinlEfdK fefen YNJ1_CAEEL : 1067- 1073: svidy Epf-ErcK ycmrk N 14: 12.0102 33( 14) S-x(2)-E-x(3,4)-E Occurences: 33(14) BDF1_YEAST : 120- 127: dlden SkqElpm-E vpkep BRM_DROME : 147- 155: qraid SmeEkglqE dprys CBP_MOUSE : 1014- 1021: pepte SkgEprs-E mmeed CBP_MOUSE : 1534- 1542: edrlt SakElpyfE gdfwp CBP_MOUSE : 1553- 1560: nvlee SikEleq-E eeerk CBP_MOUSE : 1553- 1561: nvlee SikEleqeE eerkk CCG1_HUMAN : 188- 196: ssssd SesEmgpqE atqae CCG1_HUMAN : 225- 232: tkllp SvtElfp-E frpgk CCG1_HUMAN : 1090- 1098: tdtds SsaEdsdfE emgkn CCG1_HUMAN : 1719- 1726: edllm SegEdde-E dagsd CCG1_HUMAN : 1826- 1833: ggyev SeeEede-E eeeqr CCG1_HUMAN : 1826- 1834: ggyev SeeEedeeE eeqrs CCG1_HUMAN : 1850- 1857: sqvhl SedEeds-E dfhsi FSH_DROME : 483- 490: sdalk ScnEilk-E lfskk FSH_DROME : 1029- 1036: kpsgk SkdEqma-E kkqel GCN5_YEAST : 375- 382: epmdl StmEikl-E snkyq HRX_HUMAN : 1597- 1605: drwvh SkcEnlsdE myeil HRX_HUMAN : 2101- 2109: ahspt SftEssskE sqnta HRX_HUMAN : 2432- 2439: qkgkk SckEtfk-E khssk RNG3_HUMAN : 429- 436: pglak SssEsss-E essse RNG3_HUMAN : 429- 437: pglak SssEssseE ssses RNG3_HUMAN : 433- 441: kssse SssEesssE sssee RNG3_HUMAN : 434- 441: ssses SseEsss-E sssee RNG3_HUMAN : 438- 445: sssee SssEsss-E eeeee RNG3_HUMAN : 438- 446: sssee SssEssseE eeeed RNG3_HUMAN : 442- 449: essse SssEeee-E edeed RNG3_HUMAN : 442- 450: essse SssEeeeeE deede RNG3_HUMAN : 443- 450: ssses SseEeee-E deede RNG3_HUMAN : 444- 452: ssess SeeEeeedE edeee SNF2_YEAST : 1216- 1223: littn SveEvil-E raykk SNF2_YEAST : 1270- 1277: rkkre SgvEeee-E lkdse SNF2_YEAST : 1685- 1693: pvvts SvaEsftdE adssm SPT7_YEAST : 268- 275: dsiss SniEidd-E rrlvl SPT7_YEAST : 341- 349: kkrsr SdlEaatdE qdren STH1_YEAST : 920- 927: littd SveEvil-E ramqk TBP7_YEAST : 230- 237: rhsrt SneEndd-E ndnnr YKY8_YEAST : 436- 444: qkemq SlsEqhtmE ykpyk YNJ1_CAEEL : 1413- 1420: adkly SqfEkhk-E vffti O 15: 12.0102 30( 14) S-x(4)-K-x(3,4)-K Occurences: 30(14) BDF1_YEAST : 619- 628: slspt SagsrKrrs-K alsqe BDF1_YEAST : 636- 645: sqeeq SrqieKikn-K laild BRM_DROME : 1578- 1587: eiatt SaaavKmkl-K lnksl CBP_MOUSE : 1579- 1588: etpeg SqgdsKnak-K knnkk CBP_MOUSE : 1579- 1589: etpeg SqgdsKnakkK nnkkt CBP_MOUSE : 1583- 1592: gsqgd SknakKknn-K ktnkn CBP_MOUSE : 1583- 1593: gsqgd SknakKknnkK tnknk CCG1_HUMAN : 522- 531: keeat SnspsKesk-K esslk CCG1_HUMAN : 526- 536: tsnsp SkeskKesslK ksril CCG1_HUMAN : 999- 1009: dlrrl SlknaKqllrK fgvpe FSH_DROME : 961- 971: ekrql SldinKlpgdK lgrvv FSH_DROME : 1015- 1024: esyva SclrkKthk-K psgks GCN5_YEAST : 375- 385: epmdl StmeiKlesnK yqkme HRX_HUMAN : 206- 216: ksetk SgdkiKkkdsK siekk HRX_HUMAN : 279- 289: ragkl SplksKfktgK lqigr HRX_HUMAN : 924- 934: edvat SssakKatgrK ksssh HRX_HUMAN : 1220- 1229: kkekk SktseKkds-K essvv HRX_HUMAN : 2294- 2304: kqssa SdlvsKssslK gektk HRX_HUMAN : 2649- 2658: dipfy SsstgKkrg-K rsaeg HRX_HUMAN : 2737- 2746: attrk SsqipKrng-K engte HRX_HUMAN : 2770- 2779: ehvtk SsvghKnep-K mdnch RNG3_HUMAN : 273- 282: pmrre SgrpiKppr-K dlpds RNG3_HUMAN : 496- 505: sqgpi SkpkrKrek-K ekkkk RNG3_HUMAN : 604- 614: ekrql SldinKlpgeK lgrvv SNF2_YEAST : 850- 860: isfkg SpnerKakqaK irage SNF2_YEAST : 1641- 1650: vvyed SleleKvvt-K kycei SNF2_YEAST : 1641- 1651: vvyed SleleKvvtkK yceim SPT7_YEAST : 310- 320: nkiyh SfeydKetmiK rlkle STH1_YEAST : 1230- 1240: eekpe SkspaKktaaK ktktk TBP7_YEAST : 920- 930: lktkp SdipmKkrrvK plpel YKY8_YEAST : 15- 25: teagg SderpKylpgK hpknq YNJ1_CAEEL : 1306- 1315: gvqeg SvvefKdiy-K qardd YNJ1_CAEEL : 1380- 1389: sgkkk SsknkKnnl-K knakm YNJ1_CAEEL : 1380- 1390: sgkkk SsknkKnnlkK nakmn P 16: 12.0102 31( 14) S-x(4,5)-K-x(4)-K Occurences: 31(14) BDF1_YEAST : 510- 521: kgrsg SknassKgrrdK knklk BDF1_YEAST : 515- 526: sknas SkgrrdKknklK tvvty BRM_DROME : 1393- 1404: eeedd SkrkrrKrknrK eesdd CBP_MOUSE : 1579- 1589: etpeg Sqgds-KnakkK nnkkt CBP_MOUSE : 1583- 1593: gsqgd Sknak-KknnkK tnknk CCG1_HUMAN : 324- 335: skfsq StgdidKvtdtK prvae CCG1_HUMAN : 526- 536: tsnsp Skesk-KesslK ksril CCG1_HUMAN : 538- 549: sslkk SrillgKtgviK eepqq CCG1_HUMAN : 635- 646: qpgph SvqpllKhikkK akmre CCG1_HUMAN : 999- 1009: dlrrl Slkna-KqllrK fgvpe FSH_DROME : 483- 494: sdalk ScneilKelfsK khsgy FSH_DROME : 675- 686: eirkl SeeasaKkkakK klkek FSH_DROME : 961- 971: ekrql Sldin-KlpgdK lgrvv GCN5_YEAST : 375- 385: epmdl Stmei-KlesnK yqkme HRX_HUMAN : 206- 216: ksetk Sgdki-KkkdsK siekk HRX_HUMAN : 279- 289: ragkl Splks-KfktgK lqigr HRX_HUMAN : 924- 934: edvat Sssak-KatgrK ksssh HRX_HUMAN : 1025- 1036: dkrva SllkkaKaqlcK ieksk HRX_HUMAN : 1259- 1270: pkkss SeppprKpveeK seegn HRX_HUMAN : 2294- 2304: kqssa Sdlvs-KssslK gektk HRX_HUMAN : 2298- 2309: asdlv SkssslKgektK vlssk HRX_HUMAN : 3685- 3696: qicae SiedawKsltdK vqear RNG3_HUMAN : 604- 614: ekrql Sldin-KlpgeK lgrvv RNG3_HUMAN : 702- 713: sgqln StkkppKkaneK tesss SNF2_YEAST : 850- 860: isfkg Spner-KakqaK irage SNF2_YEAST : 1641- 1651: vvyed Slele-KvvtkK yceim SPT7_YEAST : 310- 320: nkiyh Sfeyd-KetmiK rlkle STH1_YEAST : 1230- 1240: eekpe Skspa-KktaaK ktktk STH1_YEAST : 1230- 1241: eekpe SkspakKtaakK tktks TBP7_YEAST : 920- 930: lktkp Sdipm-KkrrvK plpel YKY8_YEAST : 15- 25: teagg Sderp-KylpgK hpknq YNJ1_CAEEL : 1380- 1390: sgkkk Ssknk-KnnlkK nakmn Q 17: 12.0102 39( 14) D-x(3,4)-E-x(3)-E Occurences: 39(14) BDF1_YEAST : 678- 687: ssssd DdvssEseeE BDF1_YEAST : 679- 687: sssdd Dvss-EseeE BRM_DROME : 1272- 1281: tilhq DdneeEeenE vpdde BRM_DROME : 1273- 1281: ilhqd Dnee-EeenE vpdde BRM_DROME : 1379- 1387: wlkai Ddga-EfdeE eeedd CBP_MOUSE : 992- 1001: qqpgp DvpmlEmktE vqtdd CCG1_HUMAN : 677- 686: tgkdg DlilaEyseE ngplm CCG1_HUMAN : 1475- 1483: sqsml Dlcd-EklkE kedkl FSH_DROME : 1031- 1040: sgksk DeqmaEkkqE lekrl FSH_DROME : 1781- 1789: gdrdr Drdr-ErerE rsgsg GCN5_YEAST : 373- 382: ikepm DlstmEiklE snkyq HRX_HUMAN : 871- 879: ksvek Dksr-ErdrE reken HRX_HUMAN : 1408- 1416: vdfke Dcea-EnvwE mgglg HRX_HUMAN : 1852- 1860: pilst Drsr-EdspE lnppp HRX_HUMAN : 1979- 1988: cqrhr DlikgEvvpE ngfev RNG3_HUMAN : 451- 459: eeeee Deed-EeeeE sessd SNF2_YEAST : 519- 527: dklln Dect-EstrE nalyd SNF2_YEAST : 709- 718: tkemi DshikEaseE vddls SNF2_YEAST : 1330- 1338: diysr Diga-ElkrE esesa SNF2_YEAST : 1399- 1407: kseai Dgng-EikgE nidad SPT7_YEAST : 239- 247: ededy Dded-EnydE dstdv SPT7_YEAST : 567- 575: edmek Dkdy-EldeE eevag SPT7_YEAST : 705- 713: neeee Dddd-EdedE dmvds SPT7_YEAST : 1108- 1116: sfftg Dfas-EltgE dffgf STH1_YEAST : 332- 340: insii Dfik-ErqsE qwsrq STH1_YEAST : 919- 927: rlitt Dsve-EvilE ramqk STH1_YEAST : 1061- 1070: rvyyd DglteEqflE avedd STH1_YEAST : 1220- 1229: vlenn DgkraEekpE skspa STH1_YEAST : 1344- 1352: vyvda Dkln-EftdE wfkeh TBP7_YEAST : 130- 139: sfhee DvdddEeeeE adefe TBP7_YEAST : 133- 142: eedvd DdeeeEeadE fedey TBP7_YEAST : 134- 142: edvdd Deee-EeadE fedey TBP7_YEAST : 141- 150: eeeea DefedEyldE dskdn TBP7_YEAST : 170- 179: kfvvp DpdddEeydE ddeeg TBP7_YEAST : 174- 183: pdpdd DeeydEddeE gdris TBP7_YEAST : 948- 956: aptnf Deng-EplsE kvvlr TBP7_YEAST : 1116- 1125: atrqr DlerqElflE deekr YKY8_YEAST : 340- 348: saldn Diep-EsnrE dlidq YNJ1_CAEEL : 1342- 1350: pnvie Dcir-EasnE eaqrk R 18: 12.0102 37( 14) E-x(3,4)-L-x(5)-K Occurences: 37(14) BDF1_YEAST : 361- 371: fdyvk Epmd-LgtiakK lndwq BRM_DROME : 1229- 1239: tvnsv Eeri-LaaaryK lnmde CBP_MOUSE : 648- 659: ansrd EyyhlLaekiyK iqkel CCG1_HUMAN : 53- 64: gagql EgesvLddeckK hlagl CCG1_HUMAN : 507- 517: ldpnd Enli-LeipdeK eeats CCG1_HUMAN : 1229- 1240: rrriq EqlrrLkrnqeK eklkg CCG1_HUMAN : 1239- 1249: lkrnq Ekek-LkgppeK kpkkm FSH_DROME : 143- 153: esmpk Eele-LepvtaK ggkkk FSH_DROME : 652- 663: snsde ErsarLkmlesK llglq FSH_DROME : 956- 966: pmsyd Ekrq-LsldinK lpgdk GCN5_YEAST : 370- 380: ydfik Epmd-LstmeiK lesnk HRX_HUMAN : 390- 400: kkiek Eaaq-LqgrkvK tqvkn HRX_HUMAN : 2879- 2889: llnlg Eglg-LdsnreK dmglf RNG3_HUMAN : 136- 146: asmpq Eeqe-LvvtipK nshkk RNG3_HUMAN : 599- 609: pmsyd Ekrq-LsldinK lpgek RNG3_HUMAN : 653- 663: tlrel Eryv-LsclrkK prkpy SNF2_YEAST : 933- 944: qnnlp ElwalLnfvlpK ifnsv SNF2_YEAST : 1218- 1228: ttnsv Eevi-LeraykK ldidg SNF2_YEAST : 1639- 1650: gsvvy EdsleLekvvtK kycei SPT7_YEAST : 150- 161: sdnve EdlfkLdledlK qqisg SPT7_YEAST : 275- 286: ieidd ErrlvLnisisK etlsk SPT7_YEAST : 419- 429: gisdy Elkh-LimdvrK nrskw SPT7_YEAST : 787- 797: fleyk Eqka-LesyrqK ieqns STH1_YEAST : 308- 318: laeel Erqq-LlekrkK ernlh STH1_YEAST : 636- 647: qnnlp ElwalLnfvlpK ifnsa STH1_YEAST : 701- 712: rrlkk EvekdLpdkveK vikck STH1_YEAST : 922- 932: ttdsv Eevi-LeramqK ldidg STH1_YEAST : 1043- 1054: ehfkk EdsepLgrirqK krvyy STH1_YEAST : 1091- 1101: rrear Errr-LrqngtK eneie TBP7_YEAST : 496- 507: wvgea ErqlrLlfeeaK khqps YKY8_YEAST : 17- 28: aggsd ErpkyLpgkhpK nqekt YKY8_YEAST : 152- 162: vvmli Efev-LkaknlK rnyli YKY8_YEAST : 170- 181: ylins EvkakLlhylnK lvdat YKY8_YEAST : 375- 385: rsllt Edyl-LnpnnfK kliai YKY8_YEAST : 409- 420: ttsdi EktnsLesehlK ipkyn YNJ1_CAEEL : 655- 666: andre EyyhlLaekiyK iqkel YNJ1_CAEEL : 1406- 1417: sitgn EvadkLysqfeK hkevf S 19: 12.0102 24( 14) K-x(4)-L-x(0,1)-S Occurences: 24(14) BDF1_YEAST : 193- 199: yfnyi KrpmdL-S tierk BRM_DROME : 589- 596: dqkkd KrlafLlS qtdey BRM_DROME : 779- 786: keyqi KglewLvS lynnn BRM_DROME : 1587- 1594: vkmkl KlnksLaS apatp CBP_MOUSE : 1131- 1137: yfdiv KnpmdL-S tikrk CCG1_HUMAN : 562- 568: sqpev KdpwnL-S ndeyy CCG1_HUMAN : 1112- 1118: mlqnk KtssqL-S reree FSH_DROME : 472- 478: gvava KnkekL-S dalks FSH_DROME : 476- 483: aknke KlsdaLkS cneil GCN5_YEAST : 369- 375: yydfi KepmdL-S tmeik HRX_HUMAN : 544- 551: gsrtt KklstLqS apqqq HRX_HUMAN : 853- 859: grnkd KapeeL-S kdrda RNG3_HUMAN : 344- 350: yhdii KhpmdL-S tvkrk SNF2_YEAST : 878- 884: feyii KeralL-S kvkwv SPT7_YEAST : 786- 793: lfley KeqkaLeS yrqki SPT7_YEAST : 1128- 1134: elgle KefgvL-S ssvpl SPT7_YEAST : 1128- 1135: elgle KefgvLsS svplq STH1_YEAST : 240- 247: dtfki KalveLkS lkllt STH1_YEAST : 581- 587: yeyii KdkslL-S khdwa TBP7_YEAST : 293- 299: eefid KnnnaL-S fhnps TBP7_YEAST : 483- 489: tffmr KgadiL-S kwvge TBP7_YEAST : 600- 606: qiqtr KwsspL-S tnfid YKY8_YEAST : 78- 85: ykdif KdfikLpS rkfhp YKY8_YEAST : 432- 438: iksmq KemqsL-S eqhtm YNJ1_CAEEL : 954- 960: nskvy KyglkL-S emfvs T 20: 12.0102 22( 14) K-x(4)-L-x(1,2)-T Occurences: 22(14) BDF1_YEAST : 193- 200: yfnyi KrpmdLs-T ierkl BDF1_YEAST : 360- 367: yfdyv KepmdLg-T iakkl BRM_DROME : 871- 878: qmrat KfnvlLt-T yeyvi BRM_DROME : 911- 918: knhhc KltqvLn-T hyiap CBP_MOUSE : 1131- 1138: yfdiv KnpmdLs-T ikrkl CCG1_HUMAN : 537- 545: esslk KsrilLgkT gvike CCG1_HUMAN : 865- 872: nwwvl KsdfrLp-T eeeir CCG1_HUMAN : 943- 951: fiaam KgkclLevT gvadp FSH_DROME : 522- 529: yhdii KkpmdLg-T vkrkm GCN5_YEAST : 369- 376: yydfi KepmdLs-T meikl HRX_HUMAN : 964- 972: kilik KgrgnLekT nldlg HRX_HUMAN : 971- 979: rgnle KtnldLgpT apsle RNG3_HUMAN : 344- 351: yhdii KhpmdLs-T vkrkm SNF2_YEAST : 628- 636: knkrl KfghrLiaT htnle SNF2_YEAST : 837- 844: ssefa KwaptLr-T isfkg SNF2_YEAST : 905- 912: knaqs KlsltLn-T hyhad SPT7_YEAST : 28- 36: eklfn KnffdLylT sqqlv SPT7_YEAST : 483- 490: yhqii KksmdLn-T vlkkl STH1_YEAST : 540- 547: tlefe KwapsLn-T iiykg TBP7_YEAST : 600- 607: qiqtr KwsspLs-T nfidk YKY8_YEAST : 520- 527: ltssl KdtetLl-T inkep YNJ1_CAEEL : 908- 915: yheii KrpmdLe-T vhkkl Number of patterns evaluated by Pratt:16167 Total running time: 62 seconds