------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 22 sequences from file BIOTIN PATTERN CONSERVATION: CM: min Nr of Seqs to Match 22 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 44 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename BIOTIN.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: ACCA_MYCLE 598 ACCA_MYCTU 654 BCCP_ANASP 181 BCCP_ECOLI 156 BCCP_HAEIN 155 BCCP_PROFR 123 BCCP_PSEAE 156 BCCP_STRMU 130 BIOB_LYCES 70 COAC_CHICK 2324 COAC_RAT 2345 COAC_YEAST 2237 DCOA_KLEPN 595 DCOA_SALTY 590 DUR1_YEAST 1835 HFA1_YEAST 825 PCCA_HUMAN 702 PCCA_RAT 704 PYC1_YEAST 1178 PYC2_YEAST 1180 PYC_HUMAN 96 PYC_MOUSE 1178 Pratt run started at Thu Feb 6 18:59:54 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 12.5102 35( 22) V-x(2)-G-x(2)-V 2: 12.0102 38( 22) G-x(1,2)-V-x(4)-V 3: 11.5102 49( 22) V-x(1,2)-G-x(2,3)-L 4: 11.5102 45( 22) V-x(1,3)-G-x(2)-L 5: 11.5102 41( 22) V-x(0,2)-G-x(2)-L 6: 11.5102 44( 22) G-x(2)-V-x(2,4)-G 7: 11.5102 54( 22) G-x(1,2)-V-x(2,3)-G 8: 11.5102 50( 22) G-x(2,4)-V-x(2)-G 9: 11.5102 56( 22) G-x(1,3)-V-x(2)-G 10: 11.5102 54( 22) V-x(0,2)-G-x(2)-V 11: 11.5102 49( 22) V-x(3,4)-V-x(2,3)-G 12: 11.5102 40( 22) V-x(3,4)-V-x(1,2)-G 13: 11.5102 62( 22) V-x(3,5)-V-x(2)-G 14: 11.5102 54( 22) V-x(2,4)-V-x(2)-G 15: 11.5102 47( 22) V-x(0,2)-G-x(5)-G 16: 11.5102 81( 22) A-x(3,4)-G-x(1,2)-V 17: 11.5102 26( 22) M-K-x(0,2)-M 18: 11.5102 59( 22) G-x(1,2)-V-x(3,4)-V 19: 11.0102 64( 22) I-x(2,4)-G-x(2,3)-V 20: 11.0102 62( 22) I-x(2,4)-G-x(1,2)-V Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 22.2050 26( 22) V-x(0,2)-G-x(2)-[IV]-x(2)-G-[DEQT]-x(4)-[ILV]-[AES] B 2: 15.8108 32( 22) V-x(3,4)-V-x(1,2)-G-[ADEQST]-x-[ILV] C 3: 15.6053 34( 22) G-x(2,4)-V-x(2)-G-[DEQT]-x(4)-[AGILV] D 4: 15.5962 37( 22) V-x(3,4)-V-x(2,3)-G-[ADEGQST]-x-[ILV] E 5: 15.1037 27( 22) V-x(2)-G-x(2)-V-x(3)-[DEQ] F 6: 14.8157 29( 22) G-[ADEGNQS]-x-V-x(2,4)-G-[DENQT] G 7: 14.1037 35( 22) V-x(0,2)-G-x(2)-V-x(3)-[DEQ] H 8: 13.9293 35( 22) G-x(1,2)-V-x(2)-[AGIPV]-x-V I 9: 13.7153 50( 22) V-x(3,5)-V-x(2)-G-[DEQS] J 10: 13.6965 34( 22) V-x(2,4)-V-x(2)-G-[DEQT] K 11: 13.4276 53( 22) A-x(3,4)-G-x(1,2)-V-x(2)-[GILPV] L 12: 12.4232 35( 22) I-x(2,4)-G-x(1,2)-V-x(2)-[ADGNSTV] M 13: 12.0102 38( 22) G-x(1,2)-V-x(4)-V N 14: 11.5102 49( 22) V-x(1,2)-G-x(2,3)-L O 15: 11.5102 45( 22) V-x(1,3)-G-x(2)-L P 16: 11.5102 41( 22) V-x(0,2)-G-x(2)-L Q 17: 11.5102 54( 22) G-x(1,2)-V-x(2,3)-G R 18: 11.5102 56( 22) G-x(1,3)-V-x(2)-G S 19: 11.5102 47( 22) V-x(0,2)-G-x(5)-G T 20: 11.5102 81( 22) A-x(3,4)-G-x(1,2)-V Best patterns with alignements: fitness hits(seqs) Pattern A 1: 22.2050 26( 22) V-x(0,2)-G-x(2)-[IV]-x(2)-G-[DEQT]-x(4)-[ILV]-[AES] Occurences: 26(22) ACCA_MYCLE : 545- 561: vvkva VaeGqtVmtGDlvvvLE amkme ACCA_MYCTU : 601- 617: viavq VesGsqIsaGDvvvvVE amkme BCCP_ANASP : 126- 142: geavf VevGdrIrqGQtvciIE amklm BCCP_ANASP : 128- 142: avfve V--GdrIrqGQtvciIE amklm BCCP_ECOLI : 105- 119: kafie V--GqkVnvGDtlciVE amkmm BCCP_HAEIN : 102- 118: eakaf VevGqsVkvGDalciVE amkmm BCCP_HAEIN : 104- 118: kafve V--GqsVkvGDalciVE amkmm BCCP_PROFR : 70- 86: vskil VkeGdtVkaGQtvlvLE amkme BCCP_PSEAE : 103- 119: tsanf VevGqsVkkGDilciVE amkmm BCCP_PSEAE : 105- 119: anfve V--GqsVkkGDilciVE amkmm BCCP_STRMU : 114- 130: vsaih VssGqtVdaGDnlitIA BIOB_LYCES : 16- 32: evkvl VkdGekVqeGQpvlvLE amkme COAC_CHICK : 767- 783: liqyv VedGghVfaGQcfaeIE vmkmv COAC_RAT : 766- 782: liqyi VedGghVfaGQcyaeIE vmkmv COAC_YEAST : 716- 732: lvkfl VenGehIikGQpyaeIE vmkmq DCOA_KLEPN : 579- 595: vrgia VkaGdaVavGDtlmtLA DCOA_SALTY : 574- 590: vrgia VksGdaVsvGDtlmtLA DUR1_YEAST : 1781- 1795: ksias V--GdvIeaGQglliIE amkae HFA1_YEAST : 661- 677: lvkyl VrsGdhVfaGQqyaeIE imkmq PCCA_HUMAN : 649- 665: vvavs VkpGdaVaeGQeicvIE amkmq PCCA_RAT : 651- 667: vvavs VkpGdmVaeGQeicvIE amkmq PYC1_YEAST : 1116- 1132: ivevk VhkGslIkkGQpvavLS amkme PYC2_YEAST : 1117- 1133: iievk VhkGslVkkGEsiavLS amkme PYC_HUMAN : 43- 59: vidik VvaGakVakGQplcvLS amkme PYC_HUMAN : 44- 59: idikv Va-GakVakGQplcvLS amkme PYC_MOUSE : 1125- 1141: vidik VaaGdkVakGQplcvLS amkme B 2: 15.8108 32( 22) V-x(3,4)-V-x(1,2)-G-[ADEQST]-x-[ILV] Occurences: 32(22) ACCA_MYCLE : 540- 551: pmqgt VvkvaVaeGQtV mtgdl ACCA_MYCLE : 541- 551: mqgtv Vkva-VaeGQtV mtgdl ACCA_MYCTU : 596- 607: pmpgs ViavqVesGSqI sagdv ACCA_MYCTU : 633- 643: pvsgr Vqvl-VsvGDqV kveqv BCCP_ANASP : 158- 169: dvsgq VieilVqnGEpV eynqp BCCP_ECOLI : 105- 115: kafie Vgqk-VnvGDtL civea BCCP_ECOLI : 135- 146: dksgt VkailVesGQpV efdep BCCP_HAEIN : 104- 114: kafve Vgqs-VkvGDaL civea BCCP_PROFR : 65- 76: plagt VskilVkeGDtV kagqt BCCP_PSEAE : 105- 115: anfve Vgqs-VkkGDiL civea BCCP_STRMU : 109- 120: gmagt VsaihVssGQtV dagdn BIOB_LYCES : 12- 22: mvgle Vkvl-VkdGEkV qegqp COAC_CHICK : 337- 346: nlfrq Vqae-Vp-GSpI fvmrl COAC_RAT : 336- 345: nlfrq Vqae-Vp-GSpI fvmrl COAC_YEAST : 712- 722: spgkl Vkfl-VenGEhI ikgqp COAC_YEAST : 1728- 1739: ftitl VtcrsVgiGAyL vrlgq DCOA_KLEPN : 574- 585: aqagt VrgiaVkaGDaV avgdt DCOA_SALTY : 569- 580: aqagt VrgiaVksGDaV svgdt DUR1_YEAST : 997- 1007: pdwar Vdtw-VkkGTnI speyd HFA1_YEAST : 657- 667: tpgkl Vkyl-VrsGDhV fagqq PCCA_HUMAN : 554- 564: snngs VfsveVd-GSkL nvtst PCCA_HUMAN : 644- 655: pmpgv VvavsVkpGDaV aegqe PCCA_HUMAN : 645- 655: mpgvv Vavs-VkpGDaV aegqe PCCA_RAT : 646- 657: pkpgv VvavsVkpGDmV aegqe PCCA_RAT : 647- 657: kpgvv Vavs-VkpGDmV aegqe PYC1_YEAST : 1112- 1122: magvi Vevk-VhkGSlI kkgqp PYC1_YEAST : 1148- 1159: psdgq VkevfVsdGEnV dssdl PYC2_YEAST : 720- 731: dyyle VvekiVqmGThI lgikd PYC2_YEAST : 721- 731: yylev Veki-VqmGThI lgikd PYC_HUMAN : 38- 49: pmpgk VidikVvaGAkV akgqp PYC_HUMAN : 44- 55: idikv VagakVakGQpL cvlsa PYC_MOUSE : 1120- 1131: pmpgk VidikVaaGDkV akgqp C 3: 15.6053 34( 22) G-x(2,4)-V-x(2)-G-[DEQT]-x(4)-[AGILV] Occurences: 34(22) ACCA_MYCLE : 226- 238: iadqh Gni--VvaGTrdcsL qrrfq ACCA_MYCLE : 548- 560: vavae Gqt--VmtGDlvvvL eamkm ACCA_MYCLE : 579- 591: dgiit Gla--VeaGTaitqG tvlae ACCA_MYCTU : 219- 231: ladah Gnv--VhlGErecsL qrrhq BCCP_ANASP : 121- 135: rapap GeavfVevGDrirqG qtvci BCCP_ECOLI : 106- 118: afiev Gqk--VnvGDtlciV eamkm BCCP_HAEIN : 105- 117: afvev Gqs--VkvGDalciV eamkm BCCP_PROFR : 73- 85: ilvke Gdt--VkaGQtvlvL eamkm BCCP_PSEAE : 106- 118: nfvev Gqs--VkkGDilciV eamkm BCCP_STRMU : 117- 129: ihvss Gqt--VdaGDnlitI a BIOB_LYCES : 19- 31: vlvkd Gek--VqeGQpvlvL eamkm COAC_CHICK : 770- 782: yvved Ggh--VfaGQcfaeI evmkm COAC_CHICK : 1805- 1818: raigi Gayl-VrlGQrtiqV enshi COAC_RAT : 769- 781: yived Ggh--VfaGQcyaeI evmkm COAC_RAT : 1827- 1840: raigi Gayl-VrlGQrtiqV enshl COAC_YEAST : 1736- 1749: rsvgi Gayl-VrlGQraiqV egqpi DCOA_KLEPN : 545- 557: vlase Gqt--VaaGEvlliL eamkm DCOA_KLEPN : 576- 588: agtvr Gia--VkaGDavavG dtlmt DCOA_KLEPN : 582- 594: iavka Gda--VavGDtlmtL a DCOA_SALTY : 540- 552: viate Gqt--VaeGDvlliL eamkm DCOA_SALTY : 571- 583: agtvr Gia--VksGDavsvG dtlmt DCOA_SALTY : 577- 589: iavks Gda--VsvGDtlmtL a DUR1_YEAST : 1817- 1831: ikich GngdmVdsGDivavI etla DUR1_YEAST : 1819- 1831: ichgn Gdm--VdsGDivavI etla HFA1_YEAST : 664- 676: ylvrs Gdh--VfaGQqyaeI eimkm PCCA_HUMAN : 652- 664: vsvkp Gda--VaeGQeicvI eamkm PCCA_HUMAN : 689- 701: vhcqa Gdt--VgeGDllveL e PCCA_RAT : 654- 666: vsvkp Gdm--VaeGQeicvI eamkm PCCA_RAT : 691- 703: vhcka Gdt--VgeGDllveL e PYC1_YEAST : 187- 200: ggggr Gmrv-VreGDdvadA fqrat PYC2_YEAST : 188- 201: ggggr Gmrv-VreGDdvadA fqrat PYC2_YEAST : 1120- 1132: vkvhk Gsl--VkkGEsiavL samkm PYC_HUMAN : 46- 58: ikvva Gak--VakGQplcvL samkm PYC_MOUSE : 1128- 1140: ikvaa Gdk--VakGQplcvL samkm D 4: 15.5962 37( 22) V-x(3,4)-V-x(2,3)-G-[ADEGQST]-x-[ILV] Occurences: 37(22) ACCA_MYCLE : 540- 551: pmqgt VvkvaVae-GQtV mtgdl ACCA_MYCLE : 541- 551: mqgtv Vkva-Vae-GQtV mtgdl ACCA_MYCTU : 596- 607: pmpgs ViavqVes-GSqI sagdv ACCA_MYCTU : 633- 643: pvsgr Vqvl-Vsv-GDqV kveqv BCCP_ANASP : 158- 169: dvsgq VieilVqn-GEpV eynqp BCCP_ECOLI : 105- 115: kafie Vgqk-Vnv-GDtL civea BCCP_ECOLI : 135- 146: dksgt VkailVes-GQpV efdep BCCP_HAEIN : 104- 114: kafve Vgqs-Vkv-GDaL civea BCCP_PROFR : 65- 76: plagt VskilVke-GDtV kagqt BCCP_PSEAE : 105- 115: anfve Vgqs-Vkk-GDiL civea BCCP_STRMU : 109- 120: gmagt VsaihVss-GQtV dagdn BIOB_LYCES : 12- 22: mvgle Vkvl-Vkd-GEkV qegqp COAC_CHICK : 1469- 1480: kiees Vrsm-VmryGSrL wklrv COAC_RAT : 1491- 1502: kiees Vrsm-VmryGSrL wklrv COAC_YEAST : 712- 722: spgkl Vkfl-Ven-GEhI ikgqp COAC_YEAST : 1728- 1739: ftitl VtcrsVgi-GAyL vrlgq DCOA_KLEPN : 574- 585: aqagt VrgiaVka-GDaV avgdt DCOA_SALTY : 569- 580: aqagt VrgiaVks-GDaV svgdt DUR1_YEAST : 997- 1007: pdwar Vdtw-Vkk-GTnI speyd HFA1_YEAST : 657- 667: tpgkl Vkyl-Vrs-GDhV fagqq PCCA_HUMAN : 644- 655: pmpgv VvavsVkp-GDaV aegqe PCCA_HUMAN : 645- 655: mpgvv Vavs-Vkp-GDaV aegqe PCCA_RAT : 646- 657: pkpgv VvavsVkp-GDmV aegqe PCCA_RAT : 647- 657: kpgvv Vavs-Vkp-GDmV aegqe PYC1_YEAST : 682- 694: leqlk VgvdaVkkaGGvV eatvc PYC1_YEAST : 693- 705: kkagg VveatVcfsGDmL qpgkk PYC1_YEAST : 694- 705: kaggv Veat-VcfsGDmL qpgkk PYC1_YEAST : 1112- 1122: magvi Vevk-Vhk-GSlI kkgqp PYC1_YEAST : 1148- 1159: psdgq VkevfVsd-GEnV dssdl PYC2_YEAST : 683- 695: leqlk VgvnaVkkaGGvV eatvc PYC2_YEAST : 694- 706: kkagg VveatVcysGDmL qpgkk PYC2_YEAST : 695- 706: kaggv Veat-VcysGDmL qpgkk PYC2_YEAST : 720- 731: dyyle VvekiVqm-GThI lgikd PYC2_YEAST : 721- 731: yylev Veki-Vqm-GThI lgikd PYC_HUMAN : 38- 49: pmpgk VidikVva-GAkV akgqp PYC_HUMAN : 44- 55: idikv VagakVak-GQpL cvlsa PYC_MOUSE : 1120- 1131: pmpgk VidikVaa-GDkV akgqp E 5: 15.1037 27( 22) V-x(2)-G-x(2)-V-x(3)-[DEQ] Occurences: 27(22) ACCA_MYCLE : 545- 555: vvkva VaeGqtVmtgD lvvvl ACCA_MYCLE : 551- 561: aegqt VmtGdlVvvlE amkme ACCA_MYCTU : 637- 647: rvqvl VsvGdqVkveQ vlari BCCP_ANASP : 163- 173: vieil VqnGepVeynQ plmri BCCP_ECOLI : 140- 150: vkail VesGqpVefdE plvvi BCCP_HAEIN : 102- 112: eakaf VevGqsVkvgD alciv BCCP_PROFR : 70- 80: vskil VkeGdtVkagQ tvlvl BCCP_PROFR : 76- 86: kegdt VkaGqtVlvlE amkme BCCP_PSEAE : 103- 113: tsanf VevGqsVkkgD ilciv BCCP_PSEAE : 140- 150: iesil VenGqpVefdQ plfti BCCP_STRMU : 77- 87: ilkvl VnvGdtVsenQ plmil BCCP_STRMU : 114- 124: vsaih VssGqtVdagD nliti BIOB_LYCES : 16- 26: evkvl VkdGekVqegQ pvlvl BIOB_LYCES : 22- 32: kdgek VqeGqpVlvlE amkme COAC_CHICK : 767- 777: liqyv VedGghVfagQ cfaei COAC_RAT : 766- 776: liqyi VedGghVfagQ cyaei COAC_YEAST : 1120- 1130: igdir VheGvtVpivE wkfql DCOA_KLEPN : 579- 589: vrgia VkaGdaVavgD tlmtl DCOA_SALTY : 574- 584: vrgia VksGdaVsvgD tlmtl DUR1_YEAST : 1822- 1832: gngdm VdsGdiVaviE tla HFA1_YEAST : 661- 671: lvkyl VrsGdhVfagQ qyaei PCCA_HUMAN : 649- 659: vvavs VkpGdaVaegQ eicvi PCCA_RAT : 651- 661: vvavs VkpGdmVaegQ eicvi PYC1_YEAST : 1153- 1163: vkevf VsdGenVdssD llvll PYC2_YEAST : 1117- 1127: iievk VhkGslVkkgE siavl PYC_HUMAN : 43- 53: vidik VvaGakVakgQ plcvl PYC_MOUSE : 1125- 1135: vidik VaaGdkVakgQ plcvl F 6: 14.8157 29( 22) G-[ADEGNQS]-x-V-x(2,4)-G-[DENQT] Occurences: 29(22) ACCA_MYCLE : 226- 233: iadqh GNiVva--GT rdcsl ACCA_MYCLE : 548- 555: vavae GQtVmt--GD lvvvl ACCA_MYCTU : 219- 226: ladah GNvVhl--GE recsl BCCP_ANASP : 121- 130: rapap GEaVfvevGD rirqg BCCP_ECOLI : 106- 113: afiev GQkVnv--GD tlciv BCCP_HAEIN : 105- 112: afvev GQsVkv--GD alciv BCCP_PROFR : 73- 80: ilvke GDtVka--GQ tvlvl BCCP_PSEAE : 106- 113: nfvev GQsVkk--GD ilciv BCCP_STRMU : 117- 124: ihvss GQtVda--GD nliti BIOB_LYCES : 19- 26: vlvkd GEkVqe--GQ pvlvl COAC_CHICK : 770- 777: yvved GGhVfa--GQ cfaei COAC_RAT : 769- 776: yived GGhVfa--GQ cyaei COAC_YEAST : 789- 796: mlpdf GSpVie--GT kpayk DCOA_KLEPN : 545- 552: vlase GQtVaa--GE vllil DCOA_KLEPN : 582- 589: iavka GDaVav--GD tlmtl DCOA_SALTY : 540- 547: viate GQtVae--GD vllil DCOA_SALTY : 577- 584: iavks GDaVsv--GD tlmtl DUR1_YEAST : 1819- 1826: ichgn GDmVds--GD ivavi HFA1_YEAST : 664- 671: ylvrs GDhVfa--GQ qyaei PCCA_HUMAN : 652- 659: vsvkp GDaVae--GQ eicvi PCCA_HUMAN : 689- 696: vhcqa GDtVge--GD llvel PCCA_RAT : 654- 661: vsvkp GDmVae--GQ eicvi PCCA_RAT : 691- 698: vhcka GDtVge--GD llvel PYC1_YEAST : 386- 395: yrsag GNgVrldgGN ayagt PYC2_YEAST : 387- 396: yrsag GNgVrldgGN ayaga PYC2_YEAST : 1120- 1127: vkvhk GSlVkk--GE siavl PYC_HUMAN : 46- 53: ikvva GAkVak--GQ plcvl PYC_MOUSE : 811- 820: sqpsm GAlVactkGT pldte PYC_MOUSE : 1128- 1135: ikvaa GDkVak--GQ plcvl G 7: 14.1037 35( 22) V-x(0,2)-G-x(2)-V-x(3)-[DEQ] Occurences: 35(22) ACCA_MYCLE : 545- 555: vvkva VaeGqtVmtgD lvvvl ACCA_MYCLE : 551- 561: aegqt VmtGdlVvvlE amkme ACCA_MYCTU : 637- 647: rvqvl VsvGdqVkveQ vlari ACCA_MYCTU : 639- 647: qvlvs V--GdqVkveQ vlari BCCP_ANASP : 163- 173: vieil VqnGepVeynQ plmri BCCP_ECOLI : 105- 113: kafie V--GqkVnvgD tlciv BCCP_ECOLI : 140- 150: vkail VesGqpVefdE plvvi BCCP_HAEIN : 102- 112: eakaf VevGqsVkvgD alciv BCCP_HAEIN : 104- 112: kafve V--GqsVkvgD alciv BCCP_PROFR : 70- 80: vskil VkeGdtVkagQ tvlvl BCCP_PROFR : 76- 86: kegdt VkaGqtVlvlE amkme BCCP_PSEAE : 103- 113: tsanf VevGqsVkkgD ilciv BCCP_PSEAE : 105- 113: anfve V--GqsVkkgD ilciv BCCP_PSEAE : 140- 150: iesil VenGqpVefdQ plfti BCCP_STRMU : 77- 87: ilkvl VnvGdtVsenQ plmil BCCP_STRMU : 79- 87: kvlvn V--GdtVsenQ plmil BCCP_STRMU : 114- 124: vsaih VssGqtVdagD nliti BIOB_LYCES : 16- 26: evkvl VkdGekVqegQ pvlvl BIOB_LYCES : 22- 32: kdgek VqeGqpVlvlE amkme COAC_CHICK : 767- 777: liqyv VedGghVfagQ cfaei COAC_RAT : 766- 776: liqyi VedGghVfagQ cyaei COAC_YEAST : 1120- 1130: igdir VheGvtVpivE wkfql DCOA_KLEPN : 574- 583: aqagt Vr-GiaVkagD avavg DCOA_KLEPN : 579- 589: vrgia VkaGdaVavgD tlmtl DCOA_SALTY : 569- 578: aqagt Vr-GiaVksgD avsvg DCOA_SALTY : 574- 584: vrgia VksGdaVsvgD tlmtl DUR1_YEAST : 1822- 1832: gngdm VdsGdiVaviE tla HFA1_YEAST : 661- 671: lvkyl VrsGdhVfagQ qyaei PCCA_HUMAN : 649- 659: vvavs VkpGdaVaegQ eicvi PCCA_RAT : 651- 661: vvavs VkpGdmVaegQ eicvi PYC1_YEAST : 1153- 1163: vkevf VsdGenVdssD llvll PYC2_YEAST : 1117- 1127: iievk VhkGslVkkgE siavl PYC_HUMAN : 43- 53: vidik VvaGakVakgQ plcvl PYC_HUMAN : 44- 53: idikv Va-GakVakgQ plcvl PYC_MOUSE : 1125- 1135: vidik VaaGdkVakgQ plcvl H 8: 13.9293 35( 22) G-x(1,2)-V-x(2)-[AGIPV]-x-V Occurences: 35(22) ACCA_MYCLE : 538- 545: tapmq Gt-VvkVaV aegqt ACCA_MYCTU : 594- 601: vspmp Gs-ViaVqV esgsq BCCP_ANASP : 156- 163: eadvs Gq-VieIlV qngep BCCP_ECOLI : 80- 88: aaeis GhiVrsPmV gtfyr BCCP_ECOLI : 133- 140: eadks Gt-VkaIlV esgqp BCCP_HAEIN : 79- 87: sdels GhlVrsPmV gtfyr BCCP_PROFR : 63- 70: papla Gt-VskIlV kegdt BCCP_PROFR : 100- 107: naptd Gk-VekVlV kerda BCCP_PSEAE : 80- 88: apkln GnvVrsPmV gtfyr BCCP_STRMU : 107- 114: vagma Gt-VsaIhV ssgqt BIOB_LYCES : 1- 8: Gt-VvaPmV glevk COAC_CHICK : 416- 423: lakmv Gy-VsaGtV eylys COAC_CHICK : 1202- 1209: nlnhy Gm-VhvAsV sdvll COAC_CHICK : 1957- 1965: rarlg GipVgvVaV etrtv COAC_RAT : 415- 422: lakmv Gy-VsaGtV eylys COAC_RAT : 1979- 1987: rarlg GipVgvVaV etrtv COAC_YEAST : 205- 213: cipws GtgVdtVhV dektg COAC_YEAST : 357- 364: lgklv Gy-VsaGtV eylys DCOA_KLEPN : 545- 553: vlase GqtVaaGeV llile DCOA_KLEPN : 572- 579: raaqa Gt-VrgIaV kagda DCOA_SALTY : 540- 548: viate GqtVaeGdV llile DCOA_SALTY : 567- 574: raaqa Gt-VrgIaV ksgda DUR1_YEAST : 1352- 1360: dgpsl GgfVcqAvV peael DUR1_YEAST : 1353- 1360: gpslg Gf-VcqAvV peael HFA1_YEAST : 309- 316: lgelv Gy-VsaGtV eylys PCCA_HUMAN : 552- 559: vasnn Gs-VfsVeV dgskl PCCA_HUMAN : 642- 649: rspmp Gv-VvaVsV kpgda PCCA_RAT : 644- 651: rspkp Gv-VvaVsV kpgdm PYC1_YEAST : 691- 698: avkka Gg-VveAtV cfsgd PYC1_YEAST : 1146- 1153: sspsd Gq-VkeVfV sdgen PYC2_YEAST : 692- 699: avkka Gg-VveAtV cysgd PYC_HUMAN : 36- 43: gapmp Gk-VidIkV vagak PYC_HUMAN : 73- 80: tspme Gt-VrkVhV tkdmt PYC_MOUSE : 790- 798: acaqa GadVvdVaV dsmsg PYC_MOUSE : 1118- 1125: gapmp Gk-VidIkV aagdk I 9: 13.7153 50( 22) V-x(3,5)-V-x(2)-G-[DEQS] Occurences: 50(22) ACCA_MYCLE : 372- 382: ptgpg VrldsgVetGS viggq ACCA_MYCLE : 378- 387: rldsg Vetgs-VigGQ fdsml ACCA_MYCLE : 540- 549: pmqgt Vvkva-VaeGQ tvmtg ACCA_MYCLE : 541- 549: mqgtv Vkva--VaeGQ tvmtg ACCA_MYCLE : 545- 555: vvkva VaegqtVmtGD lvvvl ACCA_MYCTU : 311- 321: tgldl VewqlrVgaGE klgfa ACCA_MYCTU : 596- 605: pmpgs Viavq-VesGS qisag ACCA_MYCTU : 633- 641: pvsgr Vqvl--VsvGD qvkve BCCP_ANASP : 158- 167: dvsgq Vieil-VqnGE pveyn BCCP_ECOLI : 105- 113: kafie Vgqk--VnvGD tlciv BCCP_ECOLI : 135- 144: dksgt Vkail-VesGQ pvefd BCCP_HAEIN : 102- 112: eakaf VevgqsVkvGD alciv BCCP_HAEIN : 104- 112: kafve Vgqs--VkvGD alciv BCCP_PROFR : 65- 74: plagt Vskil-VkeGD tvkag BCCP_PROFR : 70- 80: vskil VkegdtVkaGQ tvlvl BCCP_PROFR : 107- 117: vekvl VkerdaVqgGQ gliki BCCP_PSEAE : 103- 113: tsanf VevgqsVkkGD ilciv BCCP_PSEAE : 105- 113: anfve Vgqs--VkkGD ilciv BCCP_STRMU : 109- 118: gmagt Vsaih-VssGQ tvdag BCCP_STRMU : 114- 124: vsaih VssgqtVdaGD nliti BIOB_LYCES : 12- 20: mvgle Vkvl--VkdGE kvqeg BIOB_LYCES : 16- 26: evkvl VkdgekVqeGQ pvlvl COAC_CHICK : 767- 777: liqyv VedgghVfaGQ cfaei COAC_RAT : 766- 776: liqyi VedgghVfaGQ cyaei COAC_YEAST : 712- 720: spgkl Vkfl--VenGE hiikg COAC_YEAST : 1675- 1685: dkens VltertVinGE erfvi DCOA_KLEPN : 574- 583: aqagt Vrgia-VkaGD avavg DCOA_KLEPN : 579- 589: vrgia VkagdaVavGD tlmtl DCOA_SALTY : 569- 578: aqagt Vrgia-VksGD avsvg DCOA_SALTY : 574- 584: vrgia VksgdaVsvGD tlmtl DUR1_YEAST : 1584- 1594: sarfm VlglgdVflGS pcavp HFA1_YEAST : 657- 665: tpgkl Vkyl--VrsGD hvfag HFA1_YEAST : 661- 671: lvkyl VrsgdhVfaGQ qyaei PCCA_HUMAN : 643- 653: spmpg VvvavsVkpGD avaeg PCCA_HUMAN : 644- 653: pmpgv Vvavs-VkpGD avaeg PCCA_HUMAN : 645- 653: mpgvv Vavs--VkpGD avaeg PCCA_HUMAN : 649- 659: vvavs VkpgdaVaeGQ eicvi PCCA_RAT : 645- 655: spkpg VvvavsVkpGD mvaeg PCCA_RAT : 646- 655: pkpgv Vvavs-VkpGD mvaeg PCCA_RAT : 647- 655: kpgvv Vavs--VkpGD mvaeg PCCA_RAT : 651- 661: vvavs VkpgdmVaeGQ eicvi PYC1_YEAST : 1110- 1120: apmag VivevkVhkGS likkg PYC1_YEAST : 1112- 1120: magvi Vevk--VhkGS likkg PYC1_YEAST : 1148- 1157: psdgq Vkevf-VsdGE nvdss PYC2_YEAST : 1111- 1121: apmag ViievkVhkGS lvkkg PYC2_YEAST : 1117- 1127: iievk VhkgslVkkGE siavl PYC_HUMAN : 43- 53: vidik VvagakVakGQ plcvl PYC_HUMAN : 44- 53: idikv Vagak-VakGQ plcvl PYC_MOUSE : 1120- 1129: pmpgk Vidik-VaaGD kvakg PYC_MOUSE : 1125- 1135: vidik VaagdkVakGQ plcvl J 10: 13.6965 34( 22) V-x(2,4)-V-x(2)-G-[DEQT] Occurences: 34(22) ACCA_MYCLE : 378- 387: rldsg VetgsVigGQ fdsml ACCA_MYCLE : 540- 549: pmqgt VvkvaVaeGQ tvmtg ACCA_MYCLE : 541- 549: mqgtv Vkva-VaeGQ tvmtg ACCA_MYCTU : 266- 273: ntarc Vdy--VgaGT vefiv ACCA_MYCTU : 633- 641: pvsgr Vqvl-VsvGD qvkve BCCP_ANASP : 158- 167: dvsgq VieilVqnGE pveyn BCCP_ECOLI : 105- 113: kafie Vgqk-VnvGD tlciv BCCP_ECOLI : 135- 144: dksgt VkailVesGQ pvefd BCCP_HAEIN : 104- 112: kafve Vgqs-VkvGD alciv BCCP_PROFR : 65- 74: plagt VskilVkeGD tvkag BCCP_PSEAE : 105- 113: anfve Vgqs-VkkGD ilciv BCCP_STRMU : 109- 118: gmagt VsaihVssGQ tvdag BIOB_LYCES : 12- 20: mvgle Vkvl-VkdGE kvqeg COAC_CHICK : 415- 422: klakm Vgy--VsaGT veyly COAC_RAT : 414- 421: klakm Vgy--VsaGT veyly COAC_YEAST : 356- 363: rlgkl Vgy--VsaGT veyly COAC_YEAST : 712- 720: spgkl Vkfl-VenGE hiikg DCOA_KLEPN : 347- 354: vgtqa Vln--VltGE rykti DCOA_KLEPN : 574- 583: aqagt VrgiaVkaGD avavg DCOA_SALTY : 347- 354: vgtqa Vln--VltGE rykti DCOA_SALTY : 569- 578: aqagt VrgiaVksGD avsvg DUR1_YEAST : 997- 1005: pdwar Vdtw-VkkGT nispe DUR1_YEAST : 1368- 1375: aelwk Vgq--VkpGD siqfv HFA1_YEAST : 308- 315: rlgel Vgy--VsaGT veyly HFA1_YEAST : 657- 665: tpgkl Vkyl-VrsGD hvfag PCCA_HUMAN : 644- 653: pmpgv VvavsVkpGD avaeg PCCA_HUMAN : 645- 653: mpgvv Vavs-VkpGD avaeg PCCA_RAT : 646- 655: pkpgv VvavsVkpGD mvaeg PCCA_RAT : 647- 655: kpgvv Vavs-VkpGD mvaeg PYC1_YEAST : 1148- 1157: psdgq VkevfVsdGE nvdss PYC2_YEAST : 720- 729: dyyle VvekiVqmGT hilgi PYC2_YEAST : 721- 729: yylev Veki-VqmGT hilgi PYC_HUMAN : 44- 53: idikv VagakVakGQ plcvl PYC_MOUSE : 1120- 1129: pmpgk VidikVaaGD kvakg K 11: 13.4276 53( 22) A-x(3,4)-G-x(1,2)-V-x(2)-[GILPV] Occurences: 53(22) ACCA_MYCLE : 222- 232: eaqvi Adqh-GniVvaG trdcs ACCA_MYCLE : 525- 535: gghtg Aats-GdaVtaP mqgtv ACCA_MYCLE : 534- 543: gdavt Apmq-Gt-VvkV avaeg ACCA_MYCLE : 544- 554: tvvkv Avae-GqtVmtG dlvvv ACCA_MYCTU : 215- 224: evqvl Adah-Gn-VvhL gerec ACCA_MYCTU : 215- 225: evqvl Adah-GnvVhlG erecs ACCA_MYCTU : 627- 636: ehsle Apvs-Gr-VqvL vsvgd BCCP_ANASP : 49- 58: vpvvt Apls-Gv-VgsG lpsai BCCP_ANASP : 152- 161: mneie Advs-Gq-VieI lvqng BCCP_ECOLI : 75- 86: meapa AaeisGhiVrsP mvgtf BCCP_ECOLI : 76- 86: eapaa Aeis-GhiVrsP mvgtf BCCP_ECOLI : 101- 112: spdak AfievGqkVnvG dtlci BCCP_ECOLI : 129- 138: mnqie Adks-Gt-VkaI lvesg BCCP_HAEIN : 100- 111: speak AfvevGqsVkvG dalci BCCP_HAEIN : 128- 137: mnrie Adka-Gv-VkaI lindg BCCP_PROFR : 59- 68: egeip Apla-Gt-VskI lvkeg BCCP_PROFR : 96- 105: etein Aptd-Gk-VekV lvker BCCP_PSEAE : 75- 86: esapa ApklnGnvVrsP mvgtf BCCP_STRMU : 103- 112: eneiv Agma-Gt-VsaI hvssg BIOB_LYCES : 5- 15: gtvv Apmv-GleVkvL vkdge BIOB_LYCES : 42- 51: ehvvk Apan-Gy-VsgL eikvg COAC_CHICK : 412- 421: cavkl Akmv-Gy-VsaG tveyl COAC_CHICK : 1953- 1963: vvvgr Arlg-GipVgvV avetr COAC_RAT : 411- 420: cavkl Akmv-Gy-VsaG tveyl COAC_RAT : 1975- 1985: vvvgr Arlg-GipVgvV avetr COAC_YEAST : 348- 359: hemek AavrlGklVgyV sagtv COAC_YEAST : 349- 359: emeka Avrl-GklVgyV sagtv DCOA_KLEPN : 103- 113: rfver Avkn-GmdVfrV fdamn DCOA_KLEPN : 521- 532: apaaa ApagaGtpVtaP lagti DCOA_KLEPN : 568- 577: eteir Aaqa-Gt-VrgI avkag DCOA_KLEPN : 571- 582: iraaq AgtvrGiaVkaG davav DCOA_KLEPN : 578- 588: tvrgi Avka-GdaVavG dtlmt DCOA_SALTY : 103- 113: rfver Avkn-GmdVfrV fdamn DCOA_SALTY : 516- 527: pvqaa ApagaGtpVtaP lagni DCOA_SALTY : 563- 572: eteir Aaqa-Gt-VrgI avksg DCOA_SALTY : 566- 577: iraaq AgtvrGiaVksG davsv DCOA_SALTY : 573- 583: tvrgi Avks-GdaVsvG dtlmt DUR1_YEAST : 532- 542: ayqlf AlpknGp-VlkP glrrv HFA1_YEAST : 300- 311: qrmer AairlGelVgyV sagtv HFA1_YEAST : 301- 311: rmera Airl-GelVgyV sagtv PCCA_HUMAN : 548- 557: vhtvv Asnn-Gs-VfsV evdgs PCCA_HUMAN : 675- 684: qnsmt Agkt-Gt-VksV hcqag PCCA_RAT : 677- 686: qnsmt Agkm-Gk-VklV hckag PYC1_YEAST : 235- 244: evqll Adnh-Gn-VvhL ferdc PYC1_YEAST : 778- 789: vasmt AcalaGadVvdV ainsm PYC2_YEAST : 236- 245: evqll Adnh-Gn-VvhL ferdc PYC2_YEAST : 779- 790: vasmt AcalaGadVvdV ainsm PYC_HUMAN : 32- 41: kgqig Apmp-Gk-VidI kvvag PYC_MOUSE : 159- 169: earai Aiaa-GvpVvpG tdspi PYC_MOUSE : 410- 420: irldn AsafqGa-VisP hydsl PYC_MOUSE : 666- 676: kfcev Aken-GmdVfrV fdsln PYC_MOUSE : 703- 713: gvvea AisytGd-VadP srtky PYC_MOUSE : 785- 796: vaaml AcaqaGadVvdV avdsm PYC_MOUSE : 1114- 1123: kgqig Apmp-Gk-VidI kvaag L 12: 12.4232 35( 22) I-x(2,4)-G-x(1,2)-V-x(2)-[ADGNSTV] Occurences: 35(22) ACCA_MYCLE : 221- 232: veaqv IadqhGniVvaG trdcs ACCA_MYCLE : 576- 585: ahkdg Iit--GlaVeaG taitq ACCA_MYCTU : 607- 615: esgsq Isa--Gd-VvvV veamk ACCA_MYCTU : 607- 616: esgsq Isa--GdvVvvV eamkm BCCP_ANASP : 161- 172: gqvie IlvqnGepVeyN qplmr BCCP_ECOLI : 103- 112: dakaf Iev--GqkVnvG dtlci BCCP_ECOLI : 138- 149: gtvka IlvesGqpVefD eplvv BCCP_HAEIN : 137- 148: gvvka IlindGnaVefD epliv BCCP_HAEIN : 139- 148: vkail Ind--GnaVefD epliv BCCP_PROFR : 68- 79: gtvsk IlvkeGdtVkaG qtvlv BCCP_PSEAE : 138- 149: gties IlvenGqpVefD qplft BCCP_STRMU : 112- 123: gtvsa IhvssGqtVdaG dnlit BIOB_LYCES : 53- 62: vsgle Ikv--GqsVqdG iklfa COAC_CHICK : 1285- 1294: ilnva Iktd-Gd-VddD glaam COAC_RAT : 695- 704: nsyvv Imn--GscVevD vhrls COAC_RAT : 765- 775: kliqy IvedgGh-VfaG qcyae COAC_RAT : 765- 775: kliqy Ived-GghVfaG qcyae COAC_YEAST : 201- 211: akvpc Ipws-GtgVdtV hvdek COAC_YEAST : 1118- 1129: ytigd IrvheGvtVpiV ewkfq COAC_YEAST : 1444- 1454: plral InnvsGy-VikT emyte DCOA_KLEPN : 577- 588: gtvrg IavkaGdaVavG dtlmt DCOA_SALTY : 536- 546: niwkv Iate-GqtVaeG dvlli DCOA_SALTY : 572- 583: gtvrg IavksGdaVsvG dtlmt DUR1_YEAST : 1778- 1787: rfwks Iasv-Gd-VieA gqgll DUR1_YEAST : 1814- 1825: gkiik IchgnGdmVdsG divav HFA1_YEAST : 302- 311: meraa Irl--GelVgyV sagtv PCCA_HUMAN : 167- 177: aevnt IpgfdGv-VkdA eeavr PCCA_HUMAN : 601- 610: ggnms Iqfl-Gt-VykV niltr PCCA_RAT : 400- 410: qyqep Ihlp-GvrVdsG iqpgs PCCA_RAT : 603- 612: ggnms Iqfl-Gt-VykV hiltk PYC1_YEAST : 814- 823: slegn Idt--GinVehV relda PYC2_YEAST : 815- 824: slegn Idt--GinVehV relda PYC2_YEAST : 1154- 1163: vkdvf Ikd--GesVdaS dllvv PYC_HUMAN : 41- 52: gkvid IkvvaGakVakG qplcv PYC_MOUSE : 158- 169: veara IaiaaGvpVvpG tdspi PYC_MOUSE : 160- 169: araia Iaa--GvpVvpG tdspi PYC_MOUSE : 1123- 1134: gkvid IkvaaGdkVakG qplcv M 13: 12.0102 38( 22) G-x(1,2)-V-x(4)-V Occurences: 38(22) ACCA_MYCLE : 538- 545: tapmq Gt-VvkvaV aegqt ACCA_MYCTU : 594- 601: vspmp Gs-ViavqV esgsq ACCA_MYCTU : 640- 648: vlvsv GdqVkveqV larik BCCP_ANASP : 156- 163: eadvs Gq-VieilV qngep BCCP_ECOLI : 80- 88: aaeis GhiVrspmV gtfyr BCCP_ECOLI : 133- 140: eadks Gt-VkailV esgqp BCCP_HAEIN : 79- 87: sdels GhlVrspmV gtfyr BCCP_PROFR : 63- 70: papla Gt-VskilV kegdt BCCP_PROFR : 100- 107: naptd Gk-VekvlV kerda BCCP_PSEAE : 80- 88: apkln GnvVrspmV gtfyr BCCP_STRMU : 107- 114: vagma Gt-VsaihV ssgqt BIOB_LYCES : 1- 8: Gt-VvapmV glevk COAC_CHICK : 416- 423: lakmv Gy-VsagtV eylys COAC_CHICK : 1202- 1209: nlnhy Gm-VhvasV sdvll COAC_CHICK : 1957- 1965: rarlg GipVgvvaV etrtv COAC_RAT : 415- 422: lakmv Gy-VsagtV eylys COAC_RAT : 1979- 1987: rarlg GipVgvvaV etrtv COAC_YEAST : 205- 213: cipws GtgVdtvhV dektg COAC_YEAST : 357- 364: lgklv Gy-VsagtV eylys DCOA_KLEPN : 545- 553: vlase GqtVaageV llile DCOA_KLEPN : 572- 579: raaqa Gt-VrgiaV kagda DCOA_SALTY : 540- 548: viate GqtVaegdV llile DCOA_SALTY : 567- 574: raaqa Gt-VrgiaV ksgda DUR1_YEAST : 1352- 1360: dgpsl GgfVcqavV peael DUR1_YEAST : 1353- 1360: gpslg Gf-VcqavV peael HFA1_YEAST : 309- 316: lgelv Gy-VsagtV eylys PCCA_HUMAN : 552- 559: vasnn Gs-VfsveV dgskl PCCA_HUMAN : 642- 649: rspmp Gv-VvavsV kpgda PCCA_RAT : 644- 651: rspkp Gv-VvavsV kpgdm PYC1_YEAST : 691- 698: avkka Gg-VveatV cfsgd PYC1_YEAST : 990- 997: lqnrf Gd-VdecdV asynm PYC1_YEAST : 1146- 1153: sspsd Gq-VkevfV sdgen PYC2_YEAST : 692- 699: avkka Gg-VveatV cysgd PYC_HUMAN : 36- 43: gapmp Gk-VidikV vagak PYC_HUMAN : 73- 80: tspme Gt-VrkvhV tkdmt PYC_MOUSE : 790- 798: acaqa GadVvdvaV dsmsg PYC_MOUSE : 999- 1007: lidrh GeeVtpedV lsaam PYC_MOUSE : 1118- 1125: gapmp Gk-VidikV aagdk N 14: 11.5102 49( 22) V-x(1,2)-G-x(2,3)-L Occurences: 49(22) ACCA_MYCLE : 483- 488: tvive Vd-Grr-L evslp ACCA_MYCTU : 317- 323: ewqlr VgaGek-L gfaqn BCCP_ANASP : 54- 59: aplsg Vv-Gsg-L psaip BCCP_ECOLI : 109- 115: evgqk VnvGdt-L civea BCCP_HAEIN : 108- 114: evgqs VkvGda-L civea BCCP_PROFR : 76- 83: kegdt VkaGqtvL vleam BCCP_PROFR : 113- 119: kerda VqgGqg-L ikig BCCP_PROFR : 113- 119: kerda Vq-GgqgL ikig BCCP_PSEAE : 109- 115: evgqs VkkGdi-L civea BCCP_STRMU : 120- 126: ssgqt VdaGdn-L itia BIOB_LYCES : 22- 29: kdgek VqeGqpvL vleam BIOB_LYCES : 59- 65: kvgqs VqdGik-L falkd COAC_CHICK : 863- 869: dnlvn VmnGyc-L pepyf COAC_CHICK : 1948- 1955: pwaqt VvvGrarL ggipv COAC_CHICK : 1949- 1955: waqtv Vv-GrarL ggipv COAC_RAT : 862- 868: dnlvn VmnGyc-L pdpff COAC_RAT : 905- 911: dimts Vs-GripL nveks COAC_RAT : 1319- 1326: nkatl VehGirrL tflva COAC_RAT : 1970- 1977: pwaqt VvvGrarL ggipv COAC_RAT : 1971- 1977: waqtv Vv-GrarL ggipv COAC_YEAST : 394- 399: pttem Vs-Gvn-L paaql COAC_YEAST : 1733- 1739: vtcrs VgiGay-L vrlgq COAC_YEAST : 1881- 1888: gwakg VvvGrarL ggipl COAC_YEAST : 1882- 1888: wakgv Vv-GrarL ggipl DCOA_KLEPN : 294- 299: ilvaq Vp-Ggm-L tnleg DCOA_KLEPN : 548- 554: segqt VaaGev-L lilea DCOA_KLEPN : 548- 555: segqt VaaGevlL ileam DCOA_KLEPN : 585- 591: kagda VavGdt-L mtla DCOA_SALTY : 294- 299: ilvaq Vp-Ggm-L tnles DCOA_SALTY : 543- 549: tegqt VaeGdv-L lilea DCOA_SALTY : 543- 550: tegqt VaeGdvlL ileam DCOA_SALTY : 580- 586: ksgda VsvGdt-L mtla DUR1_YEAST : 497- 502: sikla Vv-Gah-L kglpl DUR1_YEAST : 762- 767: agvpl Vp-Gsl-L itsve DUR1_YEAST : 934- 939: pitem Vt-Gld-L vewmi DUR1_YEAST : 1173- 1179: hkpve VkrGst-L sigkl HFA1_YEAST : 732- 737: rgelp Vl-Gpp-L iegsr PCCA_HUMAN : 114- 121: traqa VhpGygfL senke PCCA_HUMAN : 559- 564: vfsve Vd-Gsk-L nvtst PCCA_HUMAN : 692- 698: qagdt VgeGdl-L vele PCCA_RAT : 115- 122: tgaqa VhpGygfL senke PCCA_RAT : 352- 358: qemil VakGyp-L rhkqe PCCA_RAT : 561- 566: tfnve Vd-Gsk-L nvtst PCCA_RAT : 694- 700: kagdt VgeGdl-L vele PYC1_YEAST : 724- 731: iaeki VqmGthiL gikdm PYC2_YEAST : 725- 732: vveki VqmGthiL gikdm PYC_HUMAN : 49- 55: vagak VakGqp-L cvlsa PYC_MOUSE : 7- 13: lkfqt VrgGlr-L lgvrr PYC_MOUSE : 7- 13: lkfqt Vr-GglrL lgvrr PYC_MOUSE : 7- 14: lkfqt VrgGlrlL gvrrs PYC_MOUSE : 114- 121: ngvda VhpGygfL serad PYC_MOUSE : 351- 357: haqih VseGrs-L pdlgl PYC_MOUSE : 731- 738: laeel VraGthiL cikdm PYC_MOUSE : 1131- 1137: aagdk VakGqp-L cvlsa O 15: 11.5102 45( 22) V-x(1,3)-G-x(2)-L Occurences: 45(22) ACCA_MYCLE : 481- 488: qqtvi VevdGrrL evslp ACCA_MYCLE : 483- 488: tvive Vd--GrrL evslp ACCA_MYCTU : 317- 323: ewqlr Vga-GekL gfaqn BCCP_ANASP : 54- 59: aplsg Vv--GsgL psaip BCCP_ECOLI : 109- 115: evgqk Vnv-GdtL civea BCCP_HAEIN : 108- 114: evgqs Vkv-GdaL civea BCCP_PROFR : 113- 119: kerda Vqg-GqgL ikig BCCP_PSEAE : 109- 115: evgqs Vkk-GdiL civea BCCP_STRMU : 120- 126: ssgqt Vda-GdnL itia BIOB_LYCES : 59- 65: kvgqs Vqd-GikL falkd COAC_CHICK : 802- 809: gcihy VkrpGavL dpgcv COAC_CHICK : 863- 869: dnlvn Vmn-GycL pepyf COAC_CHICK : 1473- 1480: svrsm VmryGsrL wklrv COAC_RAT : 801- 808: gcihy VkrpGaaL dpgcv COAC_RAT : 862- 868: dnlvn Vmn-GycL pdpff COAC_RAT : 1495- 1502: svrsm VmryGsrL wklrv COAC_YEAST : 394- 399: pttem Vs--GvnL paaql COAC_YEAST : 1733- 1739: vtcrs Vgi-GayL vrlgq DCOA_KLEPN : 294- 299: ilvaq Vp--GgmL tnleg DCOA_KLEPN : 548- 554: segqt Vaa-GevL lilea DCOA_KLEPN : 585- 591: kagda Vav-GdtL mtla DCOA_SALTY : 294- 299: ilvaq Vp--GgmL tnles DCOA_SALTY : 543- 549: tegqt Vae-GdvL lilea DCOA_SALTY : 580- 586: ksgda Vsv-GdtL mtla DUR1_YEAST : 497- 502: sikla Vv--GahL kglpl DUR1_YEAST : 762- 767: agvpl Vp--GslL itsve DUR1_YEAST : 934- 939: pitem Vt--GldL vewmi DUR1_YEAST : 1173- 1179: hkpve Vkr-GstL sigkl DUR1_YEAST : 1222- 1229: gyngr VlklGdvL flpsn DUR1_YEAST : 1784- 1791: asvgd VieaGqgL liiea HFA1_YEAST : 732- 737: rgelp Vl--GppL iegsr PCCA_HUMAN : 557- 564: gsvfs VevdGskL nvtst PCCA_HUMAN : 559- 564: vfsve Vd--GskL nvtst PCCA_HUMAN : 692- 698: qagdt Vge-GdlL vele PCCA_RAT : 352- 358: qemil Vak-GypL rhkqe PCCA_RAT : 559- 566: gptfn VevdGskL nvtst PCCA_RAT : 561- 566: tfnve Vd--GskL nvtst PCCA_RAT : 694- 700: kagdt Vge-GdlL vele PYC1_YEAST : 698- 705: vveat VcfsGdmL qpgkk PYC1_YEAST : 1041- 1048: eeiev VieqGktL iiklq PYC2_YEAST : 699- 706: vveat VcysGdmL qpgkk PYC_HUMAN : 49- 55: vagak Vak-GqpL cvlsa PYC_MOUSE : 7- 13: lkfqt Vrg-GlrL lgvrr PYC_MOUSE : 351- 357: haqih Vse-GrsL pdlgl PYC_MOUSE : 1131- 1137: aagdk Vak-GqpL cvlsa P 16: 11.5102 41( 22) V-x(0,2)-G-x(2)-L Occurences: 41(22) ACCA_MYCLE : 483- 488: tvive Vd-GrrL evslp ACCA_MYCTU : 317- 323: ewqlr VgaGekL gfaqn BCCP_ANASP : 54- 59: aplsg Vv-GsgL psaip BCCP_ANASP : 55- 59: plsgv V--GsgL psaip BCCP_ECOLI : 109- 115: evgqk VnvGdtL civea BCCP_ECOLI : 111- 115: gqkvn V--GdtL civea BCCP_HAEIN : 108- 114: evgqs VkvGdaL civea BCCP_HAEIN : 110- 114: gqsvk V--GdaL civea BCCP_PROFR : 113- 119: kerda VqgGqgL ikig BCCP_PSEAE : 109- 115: evgqs VkkGdiL civea BCCP_STRMU : 120- 126: ssgqt VdaGdnL itia BIOB_LYCES : 59- 65: kvgqs VqdGikL falkd COAC_CHICK : 863- 869: dnlvn VmnGycL pepyf COAC_RAT : 862- 868: dnlvn VmnGycL pdpff COAC_YEAST : 394- 399: pttem Vs-GvnL paaql COAC_YEAST : 1733- 1739: vtcrs VgiGayL vrlgq DCOA_KLEPN : 294- 299: ilvaq Vp-GgmL tnleg DCOA_KLEPN : 548- 554: segqt VaaGevL lilea DCOA_KLEPN : 585- 591: kagda VavGdtL mtla DCOA_KLEPN : 587- 591: gdava V--GdtL mtla DCOA_SALTY : 294- 299: ilvaq Vp-GgmL tnles DCOA_SALTY : 543- 549: tegqt VaeGdvL lilea DCOA_SALTY : 580- 586: ksgda VsvGdtL mtla DCOA_SALTY : 582- 586: gdavs V--GdtL mtla DUR1_YEAST : 497- 502: sikla Vv-GahL kglpl DUR1_YEAST : 498- 502: iklav V--GahL kglpl DUR1_YEAST : 762- 767: agvpl Vp-GslL itsve DUR1_YEAST : 934- 939: pitem Vt-GldL vewmi DUR1_YEAST : 1173- 1179: hkpve VkrGstL sigkl HFA1_YEAST : 732- 737: rgelp Vl-GppL iegsr PCCA_HUMAN : 559- 564: vfsve Vd-GskL nvtst PCCA_HUMAN : 692- 698: qagdt VgeGdlL vele PCCA_RAT : 352- 358: qemil VakGypL rhkqe PCCA_RAT : 561- 566: tfnve Vd-GskL nvtst PCCA_RAT : 694- 700: kagdt VgeGdlL vele PYC1_YEAST : 77- 81: gqytp V--GayL aidei PYC2_YEAST : 78- 82: gqytp V--GayL amdei PYC_HUMAN : 49- 55: vagak VakGqpL cvlsa PYC_MOUSE : 7- 13: lkfqt VrgGlrL lgvrr PYC_MOUSE : 351- 357: haqih VseGrsL pdlgl PYC_MOUSE : 1131- 1137: aagdk VakGqpL cvlsa Q 17: 11.5102 54( 22) G-x(1,2)-V-x(2,3)-G Occurences: 54(22) ACCA_MYCLE : 226- 232: iadqh GniVva-G trdcs ACCA_MYCLE : 381- 386: sgvet Gs-Vig-G qfdsm ACCA_MYCLE : 548- 554: vavae GqtVmt-G dlvvv ACCA_MYCLE : 579- 585: dgiit GlaVea-G taitq ACCA_MYCTU : 219- 225: ladah GnvVhl-G erecs ACCA_MYCTU : 219- 225: ladah Gn-VvhlG erecs BCCP_ANASP : 53- 58: tapls Gv-Vgs-G lpsai BCCP_ECOLI : 106- 112: afiev GqkVnv-G dtlci BCCP_HAEIN : 105- 111: afvev GqsVkv-G dalci BCCP_PROFR : 73- 79: ilvke GdtVka-G qtvlv BCCP_PSEAE : 106- 112: nfvev GqsVkk-G dilci BCCP_STRMU : 117- 123: ihvss GqtVda-G dnlit BIOB_LYCES : 19- 25: vlvkd GekVqe-G qpvlv BIOB_LYCES : 56- 62: leikv GqsVqd-G iklfa COAC_CHICK : 416- 421: lakmv Gy-Vsa-G tveyl COAC_CHICK : 770- 776: yvved GghVfa-G qcfae COAC_CHICK : 771- 776: vvedg Gh-Vfa-G qcfae COAC_CHICK : 806- 812: yvkrp Ga-VldpG cviak COAC_CHICK : 1289- 1295: aiktd Gd-VdddG laamf COAC_RAT : 415- 420: lakmv Gy-Vsa-G tveyl COAC_RAT : 769- 775: yived GghVfa-G qcyae COAC_RAT : 770- 775: ivedg Gh-Vfa-G qcyae COAC_RAT : 1673- 1680: peypd GrdViviG ndity COAC_YEAST : 357- 362: lgklv Gy-Vsa-G tveyl COAC_YEAST : 789- 795: mlpdf GspVie-G tkpay DCOA_KLEPN : 545- 551: vlase GqtVaa-G evlli DCOA_KLEPN : 576- 582: agtvr GiaVka-G davav DCOA_KLEPN : 582- 588: iavka GdaVav-G dtlmt DCOA_SALTY : 540- 546: viate GqtVae-G dvlli DCOA_SALTY : 571- 577: agtvr GiaVks-G davsv DCOA_SALTY : 577- 583: iavks GdaVsv-G dtlmt DUR1_YEAST : 537- 543: alpkn Gp-VlkpG lrrvq DUR1_YEAST : 1220- 1226: vggyn Gr-VlklG dvlfl DUR1_YEAST : 1369- 1374: elwkv Gq-Vkp-G dsiqf DUR1_YEAST : 1588- 1593: mvlgl Gd-Vfl-G spcav DUR1_YEAST : 1621- 1626: tyter Ga-Vgi-G gmymc DUR1_YEAST : 1621- 1627: tyter Ga-VgigG mymci DUR1_YEAST : 1782- 1788: siasv Gd-VieaG qglli DUR1_YEAST : 1819- 1825: ichgn GdmVds-G divav HFA1_YEAST : 309- 314: lgelv Gy-Vsa-G tveyl HFA1_YEAST : 664- 670: ylvrs GdhVfa-G qqyae PCCA_HUMAN : 402- 408: plhlp GvrVds-G iqpgs PCCA_HUMAN : 652- 658: vsvkp GdaVae-G qeicv PCCA_HUMAN : 689- 695: vhcqa GdtVge-G dllve PCCA_RAT : 404- 410: pihlp GvrVds-G iqpgs PCCA_RAT : 654- 660: vsvkp GdmVae-G qeicv PCCA_RAT : 691- 697: vhcka GdtVge-G dllve PYC1_YEAST : 187- 194: ggggr GmrVvreG ddvad PYC1_YEAST : 386- 393: yrsag GngVrldG gnaya PYC2_YEAST : 188- 195: ggggr GmrVvreG ddvad PYC2_YEAST : 387- 394: yrsag GngVrldG gnaya PYC2_YEAST : 1120- 1126: vkvhk GslVkk-G esiav PYC_HUMAN : 46- 52: ikvva GakVak-G qplcv PYC_MOUSE : 163- 169: iaiaa GvpVvp-G tdspi PYC_MOUSE : 505- 511: llhyl Gh-VmvnG pttpi PYC_MOUSE : 1128- 1134: ikvaa GdkVak-G qplcv R 18: 11.5102 56( 22) G-x(1,3)-V-x(2)-G Occurences: 56(22) ACCA_MYCLE : 226- 232: iadqh Gni-VvaG trdcs ACCA_MYCLE : 381- 386: sgvet Gs--VigG qfdsm ACCA_MYCLE : 548- 554: vavae Gqt-VmtG dlvvv ACCA_MYCLE : 579- 585: dgiit Gla-VeaG taitq ACCA_MYCTU : 219- 225: ladah Gnv-VhlG erecs BCCP_ANASP : 53- 58: tapls Gv--VgsG lpsai BCCP_ECOLI : 106- 112: afiev Gqk-VnvG dtlci BCCP_HAEIN : 105- 111: afvev Gqs-VkvG dalci BCCP_PROFR : 73- 79: ilvke Gdt-VkaG qtvlv BCCP_PSEAE : 106- 112: nfvev Gqs-VkkG dilci BCCP_STRMU : 117- 123: ihvss Gqt-VdaG dnlit BIOB_LYCES : 19- 25: vlvkd Gek-VqeG qpvlv BIOB_LYCES : 56- 62: leikv Gqs-VqdG iklfa COAC_CHICK : 81- 88: rpsms GlhlVkqG rdrkk COAC_CHICK : 416- 421: lakmv Gy--VsaG tveyl COAC_CHICK : 770- 776: yvved Ggh-VfaG qcfae COAC_CHICK : 771- 776: vvedg Gh--VfaG qcfae COAC_CHICK : 1383- 1390: mhlyl GaakVevG tevtd COAC_CHICK : 1805- 1812: raigi GaylVrlG qrtiq COAC_RAT : 80- 87: rssms GlhlVkqG rdrkk COAC_RAT : 415- 420: lakmv Gy--VsaG tveyl COAC_RAT : 769- 775: yived Ggh-VfaG qcyae COAC_RAT : 770- 775: ivedg Gh--VfaG qcyae COAC_RAT : 1405- 1412: mhlyl GaakVevG tevtd COAC_RAT : 1827- 1834: raigi GaylVrlG qrtiq COAC_YEAST : 357- 362: lgklv Gy--VsaG tveyl COAC_YEAST : 789- 795: mlpdf Gsp-VieG tkpay COAC_YEAST : 1116- 1123: rayti GdirVheG vtvpi COAC_YEAST : 1736- 1743: rsvgi GaylVrlG qraiq DCOA_KLEPN : 545- 551: vlase Gqt-VaaG evlli DCOA_KLEPN : 576- 582: agtvr Gia-VkaG davav DCOA_KLEPN : 582- 588: iavka Gda-VavG dtlmt DCOA_SALTY : 540- 546: viate Gqt-VaeG dvlli DCOA_SALTY : 571- 577: agtvr Gia-VksG davsv DCOA_SALTY : 577- 583: iavks Gda-VsvG dtlmt DUR1_YEAST : 1369- 1374: elwkv Gq--VkpG dsiqf DUR1_YEAST : 1586- 1593: rfmvl GlgdVflG spcav DUR1_YEAST : 1588- 1593: mvlgl Gd--VflG spcav DUR1_YEAST : 1621- 1626: tyter Ga--VgiG gmymc DUR1_YEAST : 1819- 1825: ichgn Gdm-VdsG divav HFA1_YEAST : 309- 314: lgelv Gy--VsaG tveyl HFA1_YEAST : 664- 670: ylvrs Gdh-VfaG qqyae PCCA_HUMAN : 402- 408: plhlp Gvr-VdsG iqpgs PCCA_HUMAN : 652- 658: vsvkp Gda-VaeG qeicv PCCA_HUMAN : 689- 695: vhcqa Gdt-VgeG dllve PCCA_RAT : 111- 118: aikkt GaqaVhpG ygfls PCCA_RAT : 404- 410: pihlp Gvr-VdsG iqpgs PCCA_RAT : 654- 660: vsvkp Gdm-VaeG qeicv PCCA_RAT : 691- 697: vhcka Gdt-VgeG dllve PYC1_YEAST : 187- 194: ggggr GmrvVreG ddvad PYC2_YEAST : 188- 195: ggggr GmrvVreG ddvad PYC2_YEAST : 1120- 1126: vkvhk Gsl-VkkG esiav PYC_HUMAN : 46- 52: ikvva Gak-VakG qplcv PYC_MOUSE : 110- 117: vaken GvdaVhpG ygfls PYC_MOUSE : 163- 169: iaiaa Gvp-VvpG tdspi PYC_MOUSE : 1128- 1134: ikvaa Gdk-VakG qplcv S 19: 11.5102 47( 22) V-x(0,2)-G-x(5)-G Occurences: 47(22) ACCA_MYCLE : 545- 554: vvkva VaeGqtvmtG dlvvv ACCA_MYCLE : 582- 591: itgla VeaGtaitqG tvlae ACCA_MYCTU : 317- 324: ewqlr V--GageklG faqnd ACCA_MYCTU : 601- 610: viavq VesGsqisaG dvvvv BCCP_ANASP : 126- 135: geavf VevGdrirqG qtvci BCCP_ANASP : 128- 135: avfve V--GdrirqG qtvci BCCP_ECOLI : 105- 112: kafie V--GqkvnvG dtlci BCCP_HAEIN : 102- 111: eakaf VevGqsvkvG dalci BCCP_HAEIN : 104- 111: kafve V--GqsvkvG dalci BCCP_PROFR : 70- 79: vskil VkeGdtvkaG qtvlv BCCP_PSEAE : 103- 112: tsanf VevGqsvkkG dilci BCCP_PSEAE : 105- 112: anfve V--GqsvkkG dilci BCCP_STRMU : 114- 123: vsaih VssGqtvdaG dnlit BIOB_LYCES : 16- 25: evkvl VkdGekvqeG qpvlv BIOB_LYCES : 48- 56: pangy Vs-GleikvG qsvqd BIOB_LYCES : 55- 62: gleik V--GqsvqdG iklfa COAC_CHICK : 767- 776: liqyv VedGghvfaG qcfae COAC_CHICK : 1948- 1957: pwaqt VvvGrarlgG ipvgv COAC_CHICK : 1949- 1957: waqtv Vv-GrarlgG ipvgv COAC_CHICK : 1950- 1957: aqtvv V--GrarlgG ipvgv COAC_RAT : 766- 775: liqyi VedGghvfaG qcyae COAC_RAT : 1970- 1979: pwaqt VvvGrarlgG ipvgv COAC_RAT : 1971- 1979: waqtv Vv-GrarlgG ipvgv COAC_RAT : 1972- 1979: aqtvv V--GrarlgG ipvgv COAC_YEAST : 716- 725: lvkfl VenGehiikG qpyae COAC_YEAST : 1881- 1890: gwakg VvvGrarlgG iplgv COAC_YEAST : 1882- 1890: wakgv Vv-GrarlgG iplgv COAC_YEAST : 1883- 1890: akgvv V--GrarlgG iplgv DCOA_KLEPN : 574- 582: aqagt Vr-GiavkaG davav DCOA_KLEPN : 579- 588: vrgia VkaGdavavG dtlmt DCOA_SALTY : 36- 45: aaldd VgyGslecwG gatfd DCOA_SALTY : 569- 577: aqagt Vr-GiavksG davsv DCOA_SALTY : 574- 583: vrgia VksGdavsvG dtlmt DUR1_YEAST : 139- 146: fatgl V--GtrspyG ktpca DUR1_YEAST : 1173- 1182: hkpve VkrGstlsiG kltsg DUR1_YEAST : 1781- 1788: ksias V--GdvieaG qglli HFA1_YEAST : 661- 670: lvkyl VrsGdhvfaG qqyae HFA1_YEAST : 732- 740: rgelp Vl-GpplieG srpnh PCCA_HUMAN : 649- 658: vvavs VkpGdavaeG qeicv PCCA_RAT : 651- 660: vvavs VkpGdmvaeG qeicv PYC1_YEAST : 71- 78: yvige V--GqytpvG aylai PYC1_YEAST : 1116- 1125: ivevk VhkGslikkG qpvav PYC2_YEAST : 1117- 1126: iievk VhkGslvkkG esiav PYC_HUMAN : 43- 52: vidik VvaGakvakG qplcv PYC_HUMAN : 44- 52: idikv Va-GakvakG qplcv PYC_MOUSE : 7- 15: lkfqt Vr-GglrllG vrrss PYC_MOUSE : 1125- 1134: vidik VaaGdkvakG qplcv T 20: 11.5102 81( 22) A-x(3,4)-G-x(1,2)-V Occurences: 81(22) ACCA_MYCLE : 222- 229: eaqvi Adqh-GniV vagtr ACCA_MYCLE : 525- 532: gghtg Aats-GdaV tapmq ACCA_MYCLE : 534- 540: gdavt Apmq-Gt-V vkvav ACCA_MYCLE : 534- 541: gdavt Apmq-GtvV kvava ACCA_MYCLE : 544- 551: tvvkv Avae-GqtV mtgdl ACCA_MYCLE : 587- 593: veagt Aitq-Gt-V laeik ACCA_MYCTU : 147- 155: dalvt AaaevGypV likps ACCA_MYCTU : 148- 155: alvta Aaev-GypV likps ACCA_MYCTU : 215- 221: evqvl Adah-Gn-V vhlge ACCA_MYCTU : 215- 222: evqvl Adah-GnvV hlger ACCA_MYCTU : 627- 633: ehsle Apvs-Gr-V qvlvs BCCP_ANASP : 49- 55: vpvvt Apls-Gv-V gsglp BCCP_ANASP : 117- 124: gtfyr Apap-GeaV fvevg BCCP_ANASP : 152- 158: mneie Advs-Gq-V ieilv BCCP_ECOLI : 75- 83: meapa AaeisGhiV rspmv BCCP_ECOLI : 76- 83: eapaa Aeis-GhiV rspmv BCCP_ECOLI : 101- 109: spdak AfievGqkV nvgdt BCCP_ECOLI : 129- 135: mnqie Adks-Gt-V kailv BCCP_HAEIN : 100- 108: speak AfvevGqsV kvgda BCCP_HAEIN : 128- 134: mnrie Adka-Gv-V kaili BCCP_PROFR : 59- 65: egeip Apla-Gt-V skilv BCCP_PROFR : 96- 102: etein Aptd-Gk-V ekvlv BCCP_PSEAE : 75- 82: esapa ApklnGn-V vrspm BCCP_PSEAE : 75- 83: esapa ApklnGnvV rspmv BCCP_STRMU : 103- 109: eneiv Agma-Gt-V saihv BIOB_LYCES : 5- 12: gtvv Apmv-GleV kvlvk BIOB_LYCES : 42- 48: ehvvk Apan-Gy-V sglei COAC_CHICK : 300- 308: ddglr AaeevGypV mikas COAC_CHICK : 301- 308: dglra Aeev-GypV mikas COAC_CHICK : 412- 418: cavkl Akmv-Gy-V sagtv COAC_CHICK : 807- 814: vkrpg AvldpGc-V iaklq COAC_CHICK : 1284- 1291: hilnv AiktdGd-V dddgl COAC_CHICK : 1385- 1393: lylga AkvevGteV tdyrf COAC_CHICK : 1953- 1960: vvvgr Arlg-GipV gvvav COAC_RAT : 299- 307: ddglk AaeevGypV mikas COAC_RAT : 300- 307: dglka Aeev-GypV mikas COAC_RAT : 411- 417: cavkl Akmv-Gy-V sagtv COAC_RAT : 806- 813: vkrpg AaldpGc-V iakmq COAC_RAT : 807- 813: krpga Aldp-Gc-V iakmq COAC_RAT : 1407- 1415: lylga AkvevGteV tdyrf COAC_RAT : 1975- 1982: vvvgr Arlg-GipV gvvav COAC_RAT : 2085- 2093: yippq AelrgGswV vidpt COAC_YEAST : 242- 249: dglqk Akri-GfpV mikas COAC_YEAST : 348- 356: hemek AavrlGklV gyvsa COAC_YEAST : 349- 356: emeka Avrl-GklV gyvsa COAC_YEAST : 1559- 1565: erepg Anai-Gm-V afkit DCOA_KLEPN : 103- 110: rfver Avkn-GmdV frvfd DCOA_KLEPN : 521- 529: apaaa ApagaGtpV tapla DCOA_KLEPN : 568- 574: eteir Aaqa-Gt-V rgiav DCOA_KLEPN : 571- 579: iraaq AgtvrGiaV kagda DCOA_KLEPN : 578- 585: tvrgi Avka-GdaV avgdt DCOA_SALTY : 103- 110: rfver Avkn-GmdV frvfd DCOA_SALTY : 516- 524: pvqaa ApagaGtpV tapla DCOA_SALTY : 563- 569: eteir Aaqa-Gt-V rgiav DCOA_SALTY : 566- 574: iraaq AgtvrGiaV ksgda DCOA_SALTY : 573- 580: tvrgi Avks-GdaV svgdt DUR1_YEAST : 532- 539: ayqlf AlpknGp-V lkpgl HFA1_YEAST : 194- 201: dalek Akli-GfpV mikas HFA1_YEAST : 300- 308: qrmer AairlGelV gyvsa HFA1_YEAST : 301- 308: rmera Airl-GelV gyvsa PCCA_HUMAN : 184- 191: eavri Arei-GypV mikas PCCA_HUMAN : 548- 554: vhtvv Asnn-Gs-V fsvev PCCA_HUMAN : 675- 681: qnsmt Agkt-Gt-V ksvhc PCCA_RAT : 185- 192: eavri Arei-GypV mikas PCCA_RAT : 677- 683: qnsmt Agkm-Gk-V klvhc PYC1_YEAST : 65- 71: qkade Ayvi-Ge-V gqytp PYC1_YEAST : 235- 241: evqll Adnh-Gn-V vhlfe PYC1_YEAST : 235- 242: evqll Adnh-GnvV hlfer PYC1_YEAST : 686- 693: kvgvd AvkkaGg-V veatv PYC1_YEAST : 686- 694: kvgvd AvkkaGgvV eatvc PYC1_YEAST : 778- 786: vasmt AcalaGadV vdvai PYC1_YEAST : 887- 895: rayre AnyllGdiV kvtpt PYC1_YEAST : 1105- 1112: plhig Apma-GviV evkvh PYC2_YEAST : 236- 242: evqll Adnh-Gn-V vhlfe PYC2_YEAST : 236- 243: evqll Adnh-GnvV hlfer PYC2_YEAST : 687- 694: kvgvn AvkkaGg-V veatv PYC2_YEAST : 687- 695: kvgvn AvkkaGgvV eatvc PYC2_YEAST : 779- 787: vasmt AcalaGadV vdvai PYC2_YEAST : 888- 896: rayre AnyllGdiV kvtpt PYC_HUMAN : 32- 38: kgqig Apmp-Gk-V idikv PYC_MOUSE : 159- 166: earai Aiaa-GvpV vpgtd PYC_MOUSE : 410- 417: irldn AsafqGa-V isphy PYC_MOUSE : 666- 673: kfcev Aken-GmdV frvfd PYC_MOUSE : 692- 699: llgme AagsaGg-V veaai PYC_MOUSE : 692- 700: llgme AagsaGgvV eaais PYC_MOUSE : 693- 699: lgmea Agsa-Gg-V veaai PYC_MOUSE : 693- 700: lgmea AgsagGv-V eaais PYC_MOUSE : 693- 700: lgmea Agsa-GgvV eaais PYC_MOUSE : 703- 710: gvvea AisytGd-V adpsr PYC_MOUSE : 785- 793: vaaml AcaqaGadV vdvav PYC_MOUSE : 1114- 1120: kgqig Apmp-Gk-V idikv Number of patterns evaluated by Pratt:679 Total running time: 3 seconds