------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 16 sequences from file BIOPTERIN_HYDROXYL PATTERN CONSERVATION: CM: min Nr of Seqs to Match 16 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 50 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename BIOPTERIN_HYDROXYL.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: PH4H_CHRVO 281 PH4H_DROME 453 PH4H_HUMAN 452 PH4H_MOUSE 453 PH4H_PSEAE 262 PH4H_RAT 453 TR5H_HUMAN 444 TR5H_MOUSE 447 TR5H_RABIT 444 TR5H_RAT 444 TY3H_BOVIN 491 TY3H_DROME 508 TY3H_HUMAN 528 TY3H_MOUSE 498 TY3H_PHASP 491 TY3H_RAT 498 Pratt run started at Thu Feb 6 18:59:45 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 32.8604 16( 16) E-P-D-x(2)-H-x(3)-G-H-x-P-x(0,1)-L 2: 28.6904 16( 16) P-D-x(2)-H-x(3)-G-H-x-P-x(0,1)-L 3: 25.0203 16( 16) G-x-G-x-L-S-S-x(2)-E 4: 24.5203 17( 16) G-x(0,1)-G-x-L-S-S-x(2)-E 5: 24.0203 17( 16) G-x(0,1)-G-x(1,2)-L-S-S-x(2)-E 6: 24.0203 16( 16) F-x(3)-L-A-x(3)-F-x(2,3)-T-x(2,3)-R 7: 20.8503 16( 16) G-x-L-S-S-x(2)-E 8: 20.3503 16( 16) H-x(3)-G-H-x-P-x(0,1)-L 9: 19.8503 28( 16) G-x(3)-L-x(1,2)-S-x(1,2)-E-x(4)-L 10: 19.8503 16( 16) L-A-x(3)-F-x(2,3)-T-x(2,3)-R 11: 19.8503 18( 16) F-x(2,3)-L-A-x(3)-F-x(2,3)-T 12: 16.6802 16( 16) P-x(4)-L-x(5)-L-x(2)-L 13: 16.6802 16( 16) L-S-S-x(2)-E 14: 16.6802 16( 16) T-x-E-x-G-L 15: 16.6802 30( 16) G-x(3)-L-x(4)-E-x(4)-L 16: 16.6802 16( 16) R-x(5)-L-x(5)-L-x(5)-R 17: 16.1802 16( 16) L-x(2)-H-x-P-x(0,1)-L 18: 16.1802 16( 16) L-x(3)-A-x(2,3)-F-x(3)-Q 19: 16.1802 17( 16) L-A-x(0,1)-R-x(4)-T 20: 16.1802 16( 16) G-H-x-P-x(0,1)-L Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 103.4045 16( 16) F-[FL]-[AEGS]-x-L-A-x-[QR]-x-F-x(2,3)-T-x(2,3)-R-x(4)-[LP]-x-[HY]-x-[PQ]-E-P-D-x(2)-H-[DE]-[IL]-[FLM]-G-H-x-P-[LM]-[FL]-x-[DEN]-x(2)-[FL]-A-[DEQ]-[FY] B 2: 95.9785 16( 16) L-A-x-[QR]-x-F-x(2,3)-T-x(2,3)-R-x(4)-[LP]-x-[HY]-x-[PQ]-E-P-D-x(2)-H-[DE]-[IL]-[FLM]-G-H-x-P-[LM]-[FL]-x-[DEN]-x(2)-[FL]-A-[DEQ]-[FY]-x(2)-[ADET] C 3: 78.8091 16( 16) T-[IV]-E-[FY]-G-L-x(2)-[EQT]-x-[ADGQ]-x(3)-[AIV]-[FY]-G-[AG]-G-[IL]-L-S-S-x(2)-E-x(2)-[HY]-[ACSV]-[IL]-[DST]-[DEGS] D 4: 61.2336 16( 16) E-P-D-x(2)-H-[DE]-[IL]-[FLM]-G-H-x-P-x(0,1)-L-x-[ADENS]-x(4)-[ADEQ]-x(3)-[ADEQT]-x-[GI]-x-[AGL]-[AGS]-x(2)-[AGV]-x(3)-[ADEGT] E 5: 57.0635 16( 16) P-D-x(2)-H-[DE]-[IL]-[FLM]-G-H-x-P-x(0,1)-L-x-[ADENS]-x(4)-[ADEQ]-x(3)-[ADEQT]-x-[GI]-x-[AGL]-[AGS]-x(2)-[AGV]-x(3)-[ADEGT] F 6: 48.7234 16( 16) H-[DE]-[IL]-[FLM]-G-H-x-P-x(0,1)-L-x-[ADENS]-x(4)-[ADEQ]-x(3)-[ADEQT]-x-[GI]-x-[AGL]-[AGS]-x(2)-[AGV]-x(3)-[ADEGT] G 7: 47.2070 16( 16) R-[AP]-[ACV]-x-[EG]-x-L-[DEST]-[AGPS]-x-[DE]-x-L-[AEGS]-x(4)-R-[IV]-x(3)-[DNT]-x(3)-[ER]-x(4)-[APT] H 8: 45.0019 16( 16) G-[AG]-G-[IL]-L-S-S-x(2)-E-x(2)-[HY]-[ACSV]-[IL]-[DST]-[DEGS] I 9: 41.3318 17( 16) G-x(0,1)-G-[IL]-L-S-S-x(2)-E-x(2)-[HY]-[ACSV]-[IL]-[DST]-[DEGS] J 10: 37.6618 16( 16) G-[IL]-L-S-S-x(2)-E-x(2)-[HY]-[ACSV]-[IL]-[DST]-[DEGS] K 11: 37.5452 17( 16) G-x(0,1)-G-x(1,2)-L-S-S-x(2)-E-x(2)-[HY]-[ACSV]-[IL]-[DST]-[DEGS] L 12: 35.2190 16( 16) G-H-x-P-x(0,1)-L-x-[ADENS]-x(4)-[ADEQ]-x(3)-[ADEQT]-x-[GI]-x-[AGL]-[AGS]-x(2)-[AGV]-x(3)-[ADEGT] M 13: 30.4534 16( 16) L-A-x(0,1)-R-[ILV]-[FY]-x(2)-T-x(2)-[FIV]-x(3)-[ENS]-x-[DP] N 14: 30.2051 16( 16) L-S-S-x(2)-E-x(2)-[HY]-[ACSV]-[IL]-[DST]-[DEGS] O 15: 29.7017 24( 16) G-[AGL]-[AG]-x-L-x(1,2)-S-x(1,2)-E-x(4)-L-[ADST]-[DEGST] P 16: 29.2615 28( 16) G-[AIL]-[AEG]-x-L-[GS]-x(3)-E-x(4)-L-[ADST]-[DEGST] Q 17: 27.8712 16( 16) P-x(4)-L-x(3)-[DHK]-x-L-x(2)-L-[AQ]-x(3)-[FIV]-x(4)-[FHY] R 18: 23.0211 18( 16) F-x(2,3)-L-A-x-[QR]-x-F-x(2,3)-T S 19: 21.4356 24( 16) G-[AGL]-[AG]-x-L-x(1,2)-S-x(1,2)-E T 20: 21.0128 16( 16) L-[AGS]-x(2)-A-x(2,3)-F-x(3)-Q-x-[AILV] Best patterns with alignements: fitness hits(seqs) Pattern A 1: 103.4045 16( 16) F-[FL]-[AEGS]-x-L-A-x-[QR]-x-F-x(2,3)-T-x(2,3)-R-x(4)-[LP]-x-[HY]-x-[PQ]-E-P-D-x(2)-H-[DE]-[IL]-[FLM]-G-H-x-P-[LM]-[FL]-x-[DEN]-x(2)-[FL]-A-[DEQ]-[FY] Occurences: 16(16) PH4H_CHRVO : 107- 155: ipddv FFEhLAnRrFpv-TwwlRephqLdYlQEPDvfHDLFGHvPLLiNpvFADY leayg PH4H_DROME : 253- 301: lssrd FLAgLAfRvFhs-TqyiRhpskPmYtPEPDvcHELMGHvPLFaDpaFAQF sqeig PH4H_HUMAN : 254- 302: lssrd FLGgLAfRvFhc-TqyiRhgskPmYtPEPDicHELLGHvPLFsDrsFAQF sqeig PH4H_MOUSE : 254- 302: lssrd FLGgLAfRvFhc-TqyiRhgskPmYtPEPDicHELLGHvPLFsDrsFAQF sqeig PH4H_PSEAE : 90- 138: ipfqt FFElLAsQqFpvaTfi-RtpeeLdYlQEPDifHEIFGHcPLLtNpwLAEF thtyg PH4H_RAT : 254- 302: lssrd FLGgLAfRvFhc-TqyiRhgskPmYtPEPDicHELLGHvPLFsDrsFAQF sqeig TR5H_HUMAN : 241- 289: lsprd FLSgLAfRvFhc-TqyvRhssdPfYtPEPDtcHELLGHvPLLaEpsFAQF sqeig TR5H_MOUSE : 244- 292: lsprd FLSgLAfRvFhc-TqyvRhssdPlYtPEPDtcHELLGHvPLLaEpsFAQF sqeig TR5H_RABIT : 241- 289: lsprd FLSgLAfRvFhc-TqyvRhssdPfYtPEPDtcHELLGHvPLLaEpsFAQF sqeig TR5H_RAT : 241- 289: lsprd FLSgLAfRvFhc-TqyvRhssdPlYtPEPDtcHELLGHvPLLaEpsFAQF sqeig TY3H_BOVIN : 293- 341: lsard FLAsLAfRvFqc-TqyiRhassPmHsPEPDccHELLGHvPMLaDrtFAQF sqdig TY3H_DROME : 307- 355: ltard FLAsLAfRiFqs-TqyvRhvnsPyHtPEPDsiHELLGHmPLLaDpsFAQF sqeig TY3H_HUMAN : 330- 378: lsard FLAsLAfRvFqc-TqyiRhassPmHsPEPDccHELLGHvPMLaDrtFAQF sqdig TY3H_MOUSE : 300- 348: lsard FLAsLAfRvFqc-TqyiRhassPmHsPEPDccHELLGHvPMLaDrtFAQF sqdig TY3H_PHASP : 293- 341: lsard FLAsLAfRvFqc-TqyiRhassPmHsPEPDccHELLGHvPMLaDktFAQF sqdig TY3H_RAT : 300- 348: lsard FLAsLAfRvFqc-TqyiRhassPmHsPEPDccHELLGHvPMLaDrtFAQF sqdig B 2: 95.9785 16( 16) L-A-x-[QR]-x-F-x(2,3)-T-x(2,3)-R-x(4)-[LP]-x-[HY]-x-[PQ]-E-P-D-x(2)-H-[DE]-[IL]-[FLM]-G-H-x-P-[LM]-[FL]-x-[DEN]-x(2)-[FL]-A-[DEQ]-[FY]-x(2)-[ADET] Occurences: 16(16) PH4H_CHRVO : 111- 158: vffeh LAnRrFpv-TwwlRephqLdYlQEPDvfHDLFGHvPLLiNpvFADYleA ygkgg PH4H_DROME : 257- 304: dflag LAfRvFhs-TqyiRhpskPmYtPEPDvcHELMGHvPLFaDpaFAQFsqE iglas PH4H_HUMAN : 258- 305: dflgg LAfRvFhc-TqyiRhgskPmYtPEPDicHELLGHvPLFsDrsFAQFsqE iglas PH4H_MOUSE : 258- 305: dflgg LAfRvFhc-TqyiRhgskPmYtPEPDicHELLGHvPLFsDrsFAQFsqE iglas PH4H_PSEAE : 94- 141: tffel LAsQqFpvaTfi-RtpeeLdYlQEPDifHEIFGHcPLLtNpwLAEFthT ygklg PH4H_RAT : 258- 305: dflgg LAfRvFhc-TqyiRhgskPmYtPEPDicHELLGHvPLFsDrsFAQFsqE iglas TR5H_HUMAN : 245- 292: dflsg LAfRvFhc-TqyvRhssdPfYtPEPDtcHELLGHvPLLaEpsFAQFsqE iglas TR5H_MOUSE : 248- 295: dflsg LAfRvFhc-TqyvRhssdPlYtPEPDtcHELLGHvPLLaEpsFAQFsqE iglas TR5H_RABIT : 245- 292: dflsg LAfRvFhc-TqyvRhssdPfYtPEPDtcHELLGHvPLLaEpsFAQFsqE iglas TR5H_RAT : 245- 292: dflsg LAfRvFhc-TqyvRhssdPlYtPEPDtcHELLGHvPLLaEpsFAQFsqE iglas TY3H_BOVIN : 297- 344: dflas LAfRvFqc-TqyiRhassPmHsPEPDccHELLGHvPMLaDrtFAQFsqD iglas TY3H_DROME : 311- 358: dflas LAfRiFqs-TqyvRhvnsPyHtPEPDsiHELLGHmPLLaDpsFAQFsqE iglas TY3H_HUMAN : 334- 381: dflas LAfRvFqc-TqyiRhassPmHsPEPDccHELLGHvPMLaDrtFAQFsqD iglas TY3H_MOUSE : 304- 351: dflas LAfRvFqc-TqyiRhassPmHsPEPDccHELLGHvPMLaDrtFAQFsqD iglas TY3H_PHASP : 297- 344: dflas LAfRvFqc-TqyiRhassPmHsPEPDccHELLGHvPMLaDktFAQFsqD iglas TY3H_RAT : 304- 351: dflas LAfRvFqc-TqyiRhassPmHsPEPDccHELLGHvPMLaDrtFAQFsqD iglas C 3: 78.8091 16( 16) T-[IV]-E-[FY]-G-L-x(2)-[EQT]-x-[ADGQ]-x(3)-[AIV]-[FY]-G-[AG]-G-[IL]-L-S-S-x(2)-E-x(2)-[HY]-[ACSV]-[IL]-[DST]-[DEGS] Occurences: 16(16) PH4H_CHRVO : 181- 213: rlywy TVEFGLinTpAgmrIYGAGILSSksEsiYCLDS aspnr PH4H_DROME : 327- 359: tifwf TVEYGLcrQeGelkAYGAGLLSSygEleYCLTD kpqlk PH4H_HUMAN : 328- 360: tiywf TVEFGLckQgDsikAYGAGLLSSfgElqYCLSE kpkll PH4H_MOUSE : 328- 360: tiywf TVEFGLckEgDsikAYGAGLLSSfgElqYCLSD kpkll PH4H_PSEAE : 164- 196: rlywm TIEFGLveTdQgkrIYGGGILSSpkEtvYSLSD eplhq PH4H_RAT : 328- 360: tiywf TVEFGLckEgDsikAYGAGLLSSfgElqYCLSD kpkll TR5H_HUMAN : 315- 347: tcyff TVEFGLckQdGqlrVFGAGLLSSisElkHALSG hakvk TR5H_MOUSE : 318- 350: tcyff TVEFGLckQdGqlrVFGAGLLSSisElkHALSG hakvk TR5H_RABIT : 315- 347: tcyff TVEFGLckQdGqlrVFGAGLLSSisElkHVLSG hakvk TR5H_RAT : 315- 347: tcyff TVEFGLckQdGqlrVFGAGLLSSisElrHALSG hakvk TY3H_BOVIN : 367- 399: tlywf TVEFGLckQnGevnAYGAGLLSSygEllHSLSE epeir TY3H_DROME : 381- 413: tvywf TVEFGLckEhGqikAYGAGLLSSygEllHAISD kcehr TY3H_HUMAN : 404- 436: tlswf TVEFGLckQnGevkAYGAGLLSSygEllHCLSE epeir TY3H_MOUSE : 374- 406: tvywf TVEFGLckQnGelkAYGAGLLSSygEllHSLSE epevr TY3H_PHASP : 367- 399: tlywf TVEFGLcrQnGivkAYGAGLLSSygEliHSLSD epevr TY3H_RAT : 374- 406: tvywf TVEFGLckQnGelkAYGAGLLSSygEllHSLSE epevr D 4: 61.2336 16( 16) E-P-D-x(2)-H-[DE]-[IL]-[FLM]-G-H-x-P-x(0,1)-L-x-[ADENS]-x(4)-[ADEQ]-x(3)-[ADEQT]-x-[GI]-x-[AGL]-[AGS]-x(2)-[AGV]-x(3)-[ADEGT] Occurences: 16(16) PH4H_CHRVO : 133- 170: ldylq EPDvfHDLFGHvPlLiNpvfaDyleAyGkGGvkAkalG aadla PH4H_DROME : 279- 315: pmytp EPDvcHELMGHvP-LfAdpafAqfsQeIgLAslGapdD yiekl PH4H_HUMAN : 280- 316: pmytp EPDicHELLGHvP-LfSdrsfAqfsQeIgLAslGapdE yiekl PH4H_MOUSE : 280- 316: pmytp EPDicHELLGHvP-LfSdrsfAqfsQeIgLAslGapdE yiekl PH4H_PSEAE : 116- 153: ldylq EPDifHEIFGHcPlLtNpwlaEfthTyGkLGlkAskeE rvfla PH4H_RAT : 280- 316: pmytp EPDicHELLGHvP-LfSdrsfAqfsQeIgLAslGapdE yiekl TR5H_HUMAN : 267- 303: pfytp EPDtcHELLGHvP-LlAepsfAqfsQeIgLAslGaseE avqkl TR5H_HUMAN : 267- 304: pfytp EPDtcHELLGHvPlLaEpsfaQfsqEiGlASlgAseeA vqkla TR5H_MOUSE : 270- 306: plytp EPDtcHELLGHvP-LlAepsfAqfsQeIgLAslGaseE tvqkl TR5H_MOUSE : 270- 307: plytp EPDtcHELLGHvPlLaEpsfaQfsqEiGlASlgAseeT vqkla TR5H_RABIT : 267- 303: pfytp EPDtcHELLGHvP-LlAepsfAqfsQeIgLAslGaseE avqkl TR5H_RABIT : 267- 304: pfytp EPDtcHELLGHvPlLaEpsfaQfsqEiGlASlgAseeA vqkla TR5H_RAT : 267- 303: plytp EPDtcHELLGHvP-LlAepsfAqfsQeIgLAslGaseE tvqkl TR5H_RAT : 267- 304: plytp EPDtcHELLGHvPlLaEpsfaQfsqEiGlASlgAseeT vqkla TY3H_BOVIN : 319- 356: pmhsp EPDccHELLGHvPmLaDrtfaQfsqDiGlASlgVsdeE iekls TY3H_DROME : 333- 369: pyhtp EPDsiHELLGHmP-LlAdpsfAqfsQeIgLAslGasdE eiekl TY3H_DROME : 333- 370: pyhtp EPDsiHELLGHmPlLaDpsfaQfsqEiGlASlgAsdeE iekls TY3H_HUMAN : 356- 393: pmhsp EPDccHELLGHvPmLaDrtfaQfsqDiGlASlgAsdeE iekls TY3H_MOUSE : 326- 363: pmhsp EPDccHELLGHvPmLaDrtfaQfsqDiGlASlgAsdeE iekls TY3H_PHASP : 319- 356: pmhsp EPDccHELLGHvPmLaDktfaQfsqDiGlASlgAtdeE iekla TY3H_RAT : 326- 363: pmhsp EPDccHELLGHvPmLaDrtfaQfsqDiGlASlgAsdeE iekls E 5: 57.0635 16( 16) P-D-x(2)-H-[DE]-[IL]-[FLM]-G-H-x-P-x(0,1)-L-x-[ADENS]-x(4)-[ADEQ]-x(3)-[ADEQT]-x-[GI]-x-[AGL]-[AGS]-x(2)-[AGV]-x(3)-[ADEGT] Occurences: 16(16) PH4H_CHRVO : 134- 170: dylqe PDvfHDLFGHvPlLiNpvfaDyleAyGkGGvkAkalG aadla PH4H_DROME : 280- 315: mytpe PDvcHELMGHvP-LfAdpafAqfsQeIgLAslGapdD yiekl PH4H_HUMAN : 281- 316: mytpe PDicHELLGHvP-LfSdrsfAqfsQeIgLAslGapdE yiekl PH4H_MOUSE : 281- 316: mytpe PDicHELLGHvP-LfSdrsfAqfsQeIgLAslGapdE yiekl PH4H_PSEAE : 117- 153: dylqe PDifHEIFGHcPlLtNpwlaEfthTyGkLGlkAskeE rvfla PH4H_RAT : 281- 316: mytpe PDicHELLGHvP-LfSdrsfAqfsQeIgLAslGapdE yiekl TR5H_HUMAN : 268- 303: fytpe PDtcHELLGHvP-LlAepsfAqfsQeIgLAslGaseE avqkl TR5H_HUMAN : 268- 304: fytpe PDtcHELLGHvPlLaEpsfaQfsqEiGlASlgAseeA vqkla TR5H_MOUSE : 271- 306: lytpe PDtcHELLGHvP-LlAepsfAqfsQeIgLAslGaseE tvqkl TR5H_MOUSE : 271- 307: lytpe PDtcHELLGHvPlLaEpsfaQfsqEiGlASlgAseeT vqkla TR5H_RABIT : 268- 303: fytpe PDtcHELLGHvP-LlAepsfAqfsQeIgLAslGaseE avqkl TR5H_RABIT : 268- 304: fytpe PDtcHELLGHvPlLaEpsfaQfsqEiGlASlgAseeA vqkla TR5H_RAT : 268- 303: lytpe PDtcHELLGHvP-LlAepsfAqfsQeIgLAslGaseE tvqkl TR5H_RAT : 268- 304: lytpe PDtcHELLGHvPlLaEpsfaQfsqEiGlASlgAseeT vqkla TY3H_BOVIN : 320- 356: mhspe PDccHELLGHvPmLaDrtfaQfsqDiGlASlgVsdeE iekls TY3H_DROME : 334- 369: yhtpe PDsiHELLGHmP-LlAdpsfAqfsQeIgLAslGasdE eiekl TY3H_DROME : 334- 370: yhtpe PDsiHELLGHmPlLaDpsfaQfsqEiGlASlgAsdeE iekls TY3H_HUMAN : 357- 393: mhspe PDccHELLGHvPmLaDrtfaQfsqDiGlASlgAsdeE iekls TY3H_MOUSE : 327- 363: mhspe PDccHELLGHvPmLaDrtfaQfsqDiGlASlgAsdeE iekls TY3H_PHASP : 320- 356: mhspe PDccHELLGHvPmLaDktfaQfsqDiGlASlgAtdeE iekla TY3H_RAT : 327- 363: mhspe PDccHELLGHvPmLaDrtfaQfsqDiGlASlgAsdeE iekls F 6: 48.7234 16( 16) H-[DE]-[IL]-[FLM]-G-H-x-P-x(0,1)-L-x-[ADENS]-x(4)-[ADEQ]-x(3)-[ADEQT]-x-[GI]-x-[AGL]-[AGS]-x(2)-[AGV]-x(3)-[ADEGT] Occurences: 16(16) PH4H_CHRVO : 138- 170: epdvf HDLFGHvPlLiNpvfaDyleAyGkGGvkAkalG aadla PH4H_DROME : 284- 315: epdvc HELMGHvP-LfAdpafAqfsQeIgLAslGapdD yiekl PH4H_HUMAN : 285- 316: epdic HELLGHvP-LfSdrsfAqfsQeIgLAslGapdE yiekl PH4H_MOUSE : 285- 316: epdic HELLGHvP-LfSdrsfAqfsQeIgLAslGapdE yiekl PH4H_PSEAE : 121- 153: epdif HEIFGHcPlLtNpwlaEfthTyGkLGlkAskeE rvfla PH4H_RAT : 285- 316: epdic HELLGHvP-LfSdrsfAqfsQeIgLAslGapdE yiekl TR5H_HUMAN : 272- 303: epdtc HELLGHvP-LlAepsfAqfsQeIgLAslGaseE avqkl TR5H_HUMAN : 272- 304: epdtc HELLGHvPlLaEpsfaQfsqEiGlASlgAseeA vqkla TR5H_MOUSE : 275- 306: epdtc HELLGHvP-LlAepsfAqfsQeIgLAslGaseE tvqkl TR5H_MOUSE : 275- 307: epdtc HELLGHvPlLaEpsfaQfsqEiGlASlgAseeT vqkla TR5H_RABIT : 272- 303: epdtc HELLGHvP-LlAepsfAqfsQeIgLAslGaseE avqkl TR5H_RABIT : 272- 304: epdtc HELLGHvPlLaEpsfaQfsqEiGlASlgAseeA vqkla TR5H_RAT : 272- 303: epdtc HELLGHvP-LlAepsfAqfsQeIgLAslGaseE tvqkl TR5H_RAT : 272- 304: epdtc HELLGHvPlLaEpsfaQfsqEiGlASlgAseeT vqkla TY3H_BOVIN : 324- 356: epdcc HELLGHvPmLaDrtfaQfsqDiGlASlgVsdeE iekls TY3H_DROME : 338- 369: epdsi HELLGHmP-LlAdpsfAqfsQeIgLAslGasdE eiekl TY3H_DROME : 338- 370: epdsi HELLGHmPlLaDpsfaQfsqEiGlASlgAsdeE iekls TY3H_HUMAN : 361- 393: epdcc HELLGHvPmLaDrtfaQfsqDiGlASlgAsdeE iekls TY3H_MOUSE : 331- 363: epdcc HELLGHvPmLaDrtfaQfsqDiGlASlgAsdeE iekls TY3H_PHASP : 324- 356: epdcc HELLGHvPmLaDktfaQfsqDiGlASlgAtdeE iekla TY3H_RAT : 331- 363: epdcc HELLGHvPmLaDrtfaQfsqDiGlASlgAsdeE iekls G 7: 47.2070 16( 16) R-[AP]-[ACV]-x-[EG]-x-L-[DEST]-[AGPS]-x-[DE]-x-L-[AEGS]-x(4)-R-[IV]-x(3)-[DNT]-x(3)-[ER]-x(4)-[APT] Occurences: 16(16) PH4H_CHRVO : 58- 90: kllpg RACdEfLEGlErLEvdadRVpdfNklnEklmaA tgwki PH4H_DROME : 242- 274: tgftl RPVaGlLSSrDfLAglafRVfhsTqyiRhpskP mytpe PH4H_HUMAN : 243- 275: tgfrl RPVaGlLSSrDfLGglafRVfhcTqyiRhgskP mytpe PH4H_MOUSE : 243- 275: tgfrl RPVaGlLSSrDfLGglafRVfhcTqyiRhgskP mytpe PH4H_PSEAE : 41- 73: kvieg RACqEyLDGiEqLGlpheRIpqlDeinRvlqaT tgwrv PH4H_RAT : 243- 275: tgfrl RPVaGlLSSrDfLGglafRVfhcTqyiRhgskP mytpe TR5H_HUMAN : 230- 262: tgfsi RPVaGyLSPrDfLSglafRVfhcTqyvRhssdP fytpe TR5H_MOUSE : 233- 265: tgfsi RPVaGyLSPrDfLSglafRVfhcTqyvRhssdP lytpe TR5H_RABIT : 230- 262: tgfsi RPVaGyLSPrDfLSglafRVfhcTqyvRhssdP fytpe TR5H_RAT : 230- 262: tgfsi RPVaGyLSPrDfLSglafRVfhcTqyvRhssdP lytpe TY3H_BOVIN : 282- 314: tgfql RPVaGlLSArDfLAslafRVfqcTqyiRhassP mhspe TY3H_DROME : 296- 328: tgfsl RPAaGlLTArDfLAslafRIfqsTqyvRhvnsP yhtpe TY3H_HUMAN : 319- 351: tgfql RPVaGlLSArDfLAslafRVfqcTqyiRhassP mhspe TY3H_MOUSE : 289- 321: tgfql RPVaGlLSArDfLAslafRVfqcTqyiRhassP mhspe TY3H_PHASP : 282- 314: tgfql RPVrGlLSArDfLAslafRVfqcTqyiRhassP mhspe TY3H_RAT : 289- 321: tgfql RPVaGlLSArDfLAslafRVfqcTqyiRhassP mhspe H 8: 45.0019 16( 16) G-[AG]-G-[IL]-L-S-S-x(2)-E-x(2)-[HY]-[ACSV]-[IL]-[DST]-[DEGS] Occurences: 16(16) PH4H_CHRVO : 197- 213: gmriy GAGILSSksEsiYCLDS aspnr PH4H_DROME : 343- 359: elkay GAGLLSSygEleYCLTD kpqlk PH4H_HUMAN : 344- 360: sikay GAGLLSSfgElqYCLSE kpkll PH4H_MOUSE : 344- 360: sikay GAGLLSSfgElqYCLSD kpkll PH4H_PSEAE : 180- 196: gkriy GGGILSSpkEtvYSLSD eplhq PH4H_RAT : 344- 360: sikay GAGLLSSfgElqYCLSD kpkll TR5H_HUMAN : 331- 347: qlrvf GAGLLSSisElkHALSG hakvk TR5H_MOUSE : 334- 350: qlrvf GAGLLSSisElkHALSG hakvk TR5H_RABIT : 331- 347: qlrvf GAGLLSSisElkHVLSG hakvk TR5H_RAT : 331- 347: qlrvf GAGLLSSisElrHALSG hakvk TY3H_BOVIN : 383- 399: evnay GAGLLSSygEllHSLSE epeir TY3H_DROME : 397- 413: qikay GAGLLSSygEllHAISD kcehr TY3H_HUMAN : 420- 436: evkay GAGLLSSygEllHCLSE epeir TY3H_MOUSE : 390- 406: elkay GAGLLSSygEllHSLSE epevr TY3H_PHASP : 383- 399: ivkay GAGLLSSygEliHSLSD epevr TY3H_RAT : 390- 406: elkay GAGLLSSygEllHSLSE epevr I 9: 41.3318 17( 16) G-x(0,1)-G-[IL]-L-S-S-x(2)-E-x(2)-[HY]-[ACSV]-[IL]-[DST]-[DEGS] Occurences: 17(16) PH4H_CHRVO : 197- 213: gmriy GaGILSSksEsiYCLDS aspnr PH4H_DROME : 343- 359: elkay GaGLLSSygEleYCLTD kpqlk PH4H_HUMAN : 344- 360: sikay GaGLLSSfgElqYCLSE kpkll PH4H_MOUSE : 344- 360: sikay GaGLLSSfgElqYCLSD kpkll PH4H_PSEAE : 180- 196: gkriy GgGILSSpkEtvYSLSD eplhq PH4H_PSEAE : 181- 196: kriyg G-GILSSpkEtvYSLSD eplhq PH4H_RAT : 344- 360: sikay GaGLLSSfgElqYCLSD kpkll TR5H_HUMAN : 331- 347: qlrvf GaGLLSSisElkHALSG hakvk TR5H_MOUSE : 334- 350: qlrvf GaGLLSSisElkHALSG hakvk TR5H_RABIT : 331- 347: qlrvf GaGLLSSisElkHVLSG hakvk TR5H_RAT : 331- 347: qlrvf GaGLLSSisElrHALSG hakvk TY3H_BOVIN : 383- 399: evnay GaGLLSSygEllHSLSE epeir TY3H_DROME : 397- 413: qikay GaGLLSSygEllHAISD kcehr TY3H_HUMAN : 420- 436: evkay GaGLLSSygEllHCLSE epeir TY3H_MOUSE : 390- 406: elkay GaGLLSSygEllHSLSE epevr TY3H_PHASP : 383- 399: ivkay GaGLLSSygEliHSLSD epevr TY3H_RAT : 390- 406: elkay GaGLLSSygEllHSLSE epevr J 10: 37.6618 16( 16) G-[IL]-L-S-S-x(2)-E-x(2)-[HY]-[ACSV]-[IL]-[DST]-[DEGS] Occurences: 16(16) PH4H_CHRVO : 199- 213: riyga GILSSksEsiYCLDS aspnr PH4H_DROME : 345- 359: kayga GLLSSygEleYCLTD kpqlk PH4H_HUMAN : 346- 360: kayga GLLSSfgElqYCLSE kpkll PH4H_MOUSE : 346- 360: kayga GLLSSfgElqYCLSD kpkll PH4H_PSEAE : 182- 196: riygg GILSSpkEtvYSLSD eplhq PH4H_RAT : 346- 360: kayga GLLSSfgElqYCLSD kpkll TR5H_HUMAN : 333- 347: rvfga GLLSSisElkHALSG hakvk TR5H_MOUSE : 336- 350: rvfga GLLSSisElkHALSG hakvk TR5H_RABIT : 333- 347: rvfga GLLSSisElkHVLSG hakvk TR5H_RAT : 333- 347: rvfga GLLSSisElrHALSG hakvk TY3H_BOVIN : 385- 399: nayga GLLSSygEllHSLSE epeir TY3H_DROME : 399- 413: kayga GLLSSygEllHAISD kcehr TY3H_HUMAN : 422- 436: kayga GLLSSygEllHCLSE epeir TY3H_MOUSE : 392- 406: kayga GLLSSygEllHSLSE epevr TY3H_PHASP : 385- 399: kayga GLLSSygEliHSLSD epevr TY3H_RAT : 392- 406: kayga GLLSSygEllHSLSE epevr K 11: 37.5452 17( 16) G-x(0,1)-G-x(1,2)-L-S-S-x(2)-E-x(2)-[HY]-[ACSV]-[IL]-[DST]-[DEGS] Occurences: 17(16) PH4H_CHRVO : 197- 213: gmriy GaGi-LSSksEsiYCLDS aspnr PH4H_DROME : 343- 359: elkay GaGl-LSSygEleYCLTD kpqlk PH4H_HUMAN : 344- 360: sikay GaGl-LSSfgElqYCLSE kpkll PH4H_MOUSE : 344- 360: sikay GaGl-LSSfgElqYCLSD kpkll PH4H_PSEAE : 180- 196: gkriy GgGi-LSSpkEtvYSLSD eplhq PH4H_PSEAE : 180- 196: gkriy G-GgiLSSpkEtvYSLSD eplhq PH4H_PSEAE : 181- 196: kriyg G-Gi-LSSpkEtvYSLSD eplhq PH4H_RAT : 344- 360: sikay GaGl-LSSfgElqYCLSD kpkll TR5H_HUMAN : 331- 347: qlrvf GaGl-LSSisElkHALSG hakvk TR5H_MOUSE : 334- 350: qlrvf GaGl-LSSisElkHALSG hakvk TR5H_RABIT : 331- 347: qlrvf GaGl-LSSisElkHVLSG hakvk TR5H_RAT : 331- 347: qlrvf GaGl-LSSisElrHALSG hakvk TY3H_BOVIN : 383- 399: evnay GaGl-LSSygEllHSLSE epeir TY3H_DROME : 397- 413: qikay GaGl-LSSygEllHAISD kcehr TY3H_HUMAN : 420- 436: evkay GaGl-LSSygEllHCLSE epeir TY3H_MOUSE : 390- 406: elkay GaGl-LSSygEllHSLSE epevr TY3H_PHASP : 383- 399: ivkay GaGl-LSSygEliHSLSD epevr TY3H_RAT : 390- 406: elkay GaGl-LSSygEllHSLSE epevr L 12: 35.2190 16( 16) G-H-x-P-x(0,1)-L-x-[ADENS]-x(4)-[ADEQ]-x(3)-[ADEQT]-x-[GI]-x-[AGL]-[AGS]-x(2)-[AGV]-x(3)-[ADEGT] Occurences: 16(16) PH4H_CHRVO : 142- 170: fhdlf GHvPlLiNpvfaDyleAyGkGGvkAkalG aadla PH4H_DROME : 288- 315: chelm GHvP-LfAdpafAqfsQeIgLAslGapdD yiekl PH4H_HUMAN : 289- 316: chell GHvP-LfSdrsfAqfsQeIgLAslGapdE yiekl PH4H_MOUSE : 289- 316: chell GHvP-LfSdrsfAqfsQeIgLAslGapdE yiekl PH4H_PSEAE : 125- 153: fheif GHcPlLtNpwlaEfthTyGkLGlkAskeE rvfla PH4H_RAT : 289- 316: chell GHvP-LfSdrsfAqfsQeIgLAslGapdE yiekl TR5H_HUMAN : 276- 303: chell GHvP-LlAepsfAqfsQeIgLAslGaseE avqkl TR5H_HUMAN : 276- 304: chell GHvPlLaEpsfaQfsqEiGlASlgAseeA vqkla TR5H_MOUSE : 279- 306: chell GHvP-LlAepsfAqfsQeIgLAslGaseE tvqkl TR5H_MOUSE : 279- 307: chell GHvPlLaEpsfaQfsqEiGlASlgAseeT vqkla TR5H_RABIT : 276- 303: chell GHvP-LlAepsfAqfsQeIgLAslGaseE avqkl TR5H_RABIT : 276- 304: chell GHvPlLaEpsfaQfsqEiGlASlgAseeA vqkla TR5H_RAT : 276- 303: chell GHvP-LlAepsfAqfsQeIgLAslGaseE tvqkl TR5H_RAT : 276- 304: chell GHvPlLaEpsfaQfsqEiGlASlgAseeT vqkla TY3H_BOVIN : 328- 356: chell GHvPmLaDrtfaQfsqDiGlASlgVsdeE iekls TY3H_DROME : 342- 369: ihell GHmP-LlAdpsfAqfsQeIgLAslGasdE eiekl TY3H_DROME : 342- 370: ihell GHmPlLaDpsfaQfsqEiGlASlgAsdeE iekls TY3H_HUMAN : 365- 393: chell GHvPmLaDrtfaQfsqDiGlASlgAsdeE iekls TY3H_MOUSE : 335- 363: chell GHvPmLaDrtfaQfsqDiGlASlgAsdeE iekls TY3H_PHASP : 328- 356: chell GHvPmLaDktfaQfsqDiGlASlgAtdeE iekla TY3H_RAT : 335- 363: chell GHvPmLaDrtfaQfsqDiGlASlgAsdeE iekls M 13: 30.4534 16( 16) L-A-x(0,1)-R-[ILV]-[FY]-x(2)-T-x(2)-[FIV]-x(3)-[ENS]-x-[DP] Occurences: 16(16) PH4H_CHRVO : 174- 190: lgaad LA-RLYwyTveFgliNtP agmri PH4H_DROME : 257- 274: dflag LAfRVFhsTqyIrhpSkP mytpe PH4H_HUMAN : 258- 275: dflgg LAfRVFhcTqyIrhgSkP mytpe PH4H_MOUSE : 258- 275: dflgg LAfRVFhcTqyIrhgSkP mytpe PH4H_PSEAE : 157- 173: eervf LA-RLYwmTieFglvEtD qgkri PH4H_RAT : 258- 275: dflgg LAfRVFhcTqyIrhgSkP mytpe TR5H_HUMAN : 245- 262: dflsg LAfRVFhcTqyVrhsSdP fytpe TR5H_MOUSE : 248- 265: dflsg LAfRVFhcTqyVrhsSdP lytpe TR5H_RABIT : 245- 262: dflsg LAfRVFhcTqyVrhsSdP fytpe TR5H_RAT : 245- 262: dflsg LAfRVFhcTqyVrhsSdP lytpe TY3H_BOVIN : 297- 314: dflas LAfRVFqcTqyIrhaSsP mhspe TY3H_DROME : 311- 328: dflas LAfRIFqsTqyVrhvNsP yhtpe TY3H_HUMAN : 334- 351: dflas LAfRVFqcTqyIrhaSsP mhspe TY3H_MOUSE : 304- 321: dflas LAfRVFqcTqyIrhaSsP mhspe TY3H_PHASP : 297- 314: dflas LAfRVFqcTqyIrhaSsP mhspe TY3H_RAT : 304- 321: dflas LAfRVFqcTqyIrhaSsP mhspe N 14: 30.2051 16( 16) L-S-S-x(2)-E-x(2)-[HY]-[ACSV]-[IL]-[DST]-[DEGS] Occurences: 16(16) PH4H_CHRVO : 201- 213: ygagi LSSksEsiYCLDS aspnr PH4H_DROME : 347- 359: ygagl LSSygEleYCLTD kpqlk PH4H_HUMAN : 348- 360: ygagl LSSfgElqYCLSE kpkll PH4H_MOUSE : 348- 360: ygagl LSSfgElqYCLSD kpkll PH4H_PSEAE : 184- 196: ygggi LSSpkEtvYSLSD eplhq PH4H_RAT : 348- 360: ygagl LSSfgElqYCLSD kpkll TR5H_HUMAN : 335- 347: fgagl LSSisElkHALSG hakvk TR5H_MOUSE : 338- 350: fgagl LSSisElkHALSG hakvk TR5H_RABIT : 335- 347: fgagl LSSisElkHVLSG hakvk TR5H_RAT : 335- 347: fgagl LSSisElrHALSG hakvk TY3H_BOVIN : 387- 399: ygagl LSSygEllHSLSE epeir TY3H_DROME : 401- 413: ygagl LSSygEllHAISD kcehr TY3H_HUMAN : 424- 436: ygagl LSSygEllHCLSE epeir TY3H_MOUSE : 394- 406: ygagl LSSygEllHSLSE epevr TY3H_PHASP : 387- 399: ygagl LSSygEliHSLSD epevr TY3H_RAT : 394- 406: ygagl LSSygEllHSLSE epevr O 15: 29.7017 24( 16) G-[AGL]-[AG]-x-L-x(1,2)-S-x(1,2)-E-x(4)-L-[ADST]-[DEGST] Occurences: 24(16) PH4H_CHRVO : 197- 213: gmriy GAGiLs-SksEsiycLDS aspnr PH4H_DROME : 343- 359: elkay GAGlLs-SygEleycLTD kpqlk PH4H_HUMAN : 344- 360: sikay GAGlLs-SfgElqycLSE kpkll PH4H_MOUSE : 344- 360: sikay GAGlLs-SfgElqycLSD kpkll PH4H_PSEAE : 180- 196: gkriy GGGiLs-SpkEtvysLSD eplhq PH4H_RAT : 344- 360: sikay GAGlLs-SfgElqycLSD kpkll TR5H_HUMAN : 294- 310: fsqei GLAsLgaSe-EavqkLAT cyfft TR5H_HUMAN : 331- 347: qlrvf GAGlLs-SisElkhaLSG hakvk TR5H_MOUSE : 297- 313: fsqei GLAsLgaSe-EtvqkLAT cyfft TR5H_MOUSE : 334- 350: qlrvf GAGlLs-SisElkhaLSG hakvk TR5H_RABIT : 294- 310: fsqei GLAsLgaSe-EavqkLAT cyfft TR5H_RABIT : 331- 347: qlrvf GAGlLs-SisElkhvLSG hakvk TR5H_RAT : 294- 310: fsqei GLAsLgaSe-EtvqkLAT cyfft TR5H_RAT : 331- 347: qlrvf GAGlLs-SisElrhaLSG hakvk TY3H_BOVIN : 346- 362: fsqdi GLAsLgvSd-EeiekLST lywft TY3H_BOVIN : 383- 399: evnay GAGlLs-SygEllhsLSE epeir TY3H_DROME : 360- 376: fsqei GLAsLgaSd-EeiekLST vywft TY3H_HUMAN : 383- 399: fsqdi GLAsLgaSd-EeiekLST lswft TY3H_HUMAN : 420- 436: evkay GAGlLs-SygEllhcLSE epeir TY3H_MOUSE : 353- 369: fsqdi GLAsLgaSd-EeiekLST vywft TY3H_MOUSE : 390- 406: elkay GAGlLs-SygEllhsLSE epevr TY3H_PHASP : 383- 399: ivkay GAGlLs-SygElihsLSD epevr TY3H_RAT : 353- 369: fsqdi GLAsLgaSd-EeiekLST vywft TY3H_RAT : 390- 406: elkay GAGlLs-SygEllhsLSE epevr P 16: 29.2615 28( 16) G-[AIL]-[AEG]-x-L-[GS]-x(3)-E-x(4)-L-[ADST]-[DEGST] Occurences: 28(16) PH4H_CHRVO : 197- 213: gmriy GAGiLSsksEsiycLDS aspnr PH4H_DROME : 343- 359: elkay GAGlLSsygEleycLTD kpqlk PH4H_HUMAN : 307- 323: fsqei GLAsLGapdEyiekLAT iywft PH4H_HUMAN : 344- 360: sikay GAGlLSsfgElqycLSE kpkll PH4H_MOUSE : 307- 323: fsqei GLAsLGapdEyiekLAT iywft PH4H_MOUSE : 344- 360: sikay GAGlLSsfgElqycLSD kpkll PH4H_PSEAE : 49- 65: qeyld GIEqLGlphEripqLDE inrvl PH4H_RAT : 307- 323: fsqei GLAsLGapdEyiekLAT iywft PH4H_RAT : 344- 360: sikay GAGlLSsfgElqycLSD kpkll TR5H_HUMAN : 294- 310: fsqei GLAsLGaseEavqkLAT cyfft TR5H_HUMAN : 331- 347: qlrvf GAGlLSsisElkhaLSG hakvk TR5H_MOUSE : 297- 313: fsqei GLAsLGaseEtvqkLAT cyfft TR5H_MOUSE : 334- 350: qlrvf GAGlLSsisElkhaLSG hakvk TR5H_RABIT : 294- 310: fsqei GLAsLGaseEavqkLAT cyfft TR5H_RABIT : 331- 347: qlrvf GAGlLSsisElkhvLSG hakvk TR5H_RAT : 294- 310: fsqei GLAsLGaseEtvqkLAT cyfft TR5H_RAT : 331- 347: qlrvf GAGlLSsisElrhaLSG hakvk TY3H_BOVIN : 346- 362: fsqdi GLAsLGvsdEeiekLST lywft TY3H_BOVIN : 383- 399: evnay GAGlLSsygEllhsLSE epeir TY3H_DROME : 360- 376: fsqei GLAsLGasdEeiekLST vywft TY3H_HUMAN : 383- 399: fsqdi GLAsLGasdEeiekLST lswft TY3H_HUMAN : 420- 436: evkay GAGlLSsygEllhcLSE epeir TY3H_MOUSE : 353- 369: fsqdi GLAsLGasdEeiekLST vywft TY3H_MOUSE : 390- 406: elkay GAGlLSsygEllhsLSE epevr TY3H_PHASP : 346- 362: fsqdi GLAsLGatdEeiekLAT lywft TY3H_PHASP : 383- 399: ivkay GAGlLSsygElihsLSD epevr TY3H_RAT : 353- 369: fsqdi GLAsLGasdEeiekLST vywft TY3H_RAT : 390- 406: elkay GAGlLSsygEllhsLSE epevr Q 17: 27.8712 16( 16) P-x(4)-L-x(3)-[DHK]-x-L-x(2)-L-[AQ]-x(3)-[FIV]-x(4)-[FHY] Occurences: 16(16) PH4H_CHRVO : 117- 141: anrrf PvtwwLrepHqLdyLQepdVfhdlF ghvpl PH4H_DROME : 243- 267: gftlr PvaglLssrDfLagLAfrvFhstqY irhps PH4H_HUMAN : 244- 268: gfrlr PvaglLssrDfLggLAfrvFhctqY irhgs PH4H_MOUSE : 244- 268: gfrlr PvaglLssrDfLggLAfrvFhctqY irhgs PH4H_PSEAE : 220- 244: idilq PlyfvLpdlKrLfqLAqedImalvH eamrl PH4H_RAT : 244- 268: gfrlr PvaglLssrDfLggLAfrvFhctqY irhgs TR5H_HUMAN : 231- 255: gfsir PvagyLsprDfLsgLAfrvFhctqY vrhss TR5H_MOUSE : 234- 258: gfsir PvagyLsprDfLsgLAfrvFhctqY vrhss TR5H_RABIT : 231- 255: gfsir PvagyLsprDfLsgLAfrvFhctqY vrhss TR5H_RAT : 231- 255: gfsir PvagyLsprDfLsgLAfrvFhctqY vrhss TY3H_BOVIN : 283- 307: gfqlr PvaglLsarDfLasLAfrvFqctqY irhas TY3H_DROME : 297- 321: gfslr PaaglLtarDfLasLAfriFqstqY vrhvn TY3H_HUMAN : 320- 344: gfqlr PvaglLsarDfLasLAfrvFqctqY irhas TY3H_MOUSE : 290- 314: gfqlr PvaglLsarDfLasLAfrvFqctqY irhas TY3H_PHASP : 283- 307: gfqlr PvrglLsarDfLasLAfrvFqctqY irhas TY3H_RAT : 290- 314: gfqlr PvaglLsarDfLasLAfrvFqctqY irhas R 18: 23.0211 18( 16) F-x(2,3)-L-A-x-[QR]-x-F-x(2,3)-T Occurences: 18(16) PH4H_CHRVO : 107- 119: ipddv FfehLAnRrFpv-T wwlre PH4H_CHRVO : 108- 119: pddvf Feh-LAnRrFpv-T wwlre PH4H_DROME : 253- 265: lssrd FlagLAfRvFhs-T qyirh PH4H_HUMAN : 254- 266: lssrd FlggLAfRvFhc-T qyirh PH4H_MOUSE : 254- 266: lssrd FlggLAfRvFhc-T qyirh PH4H_PSEAE : 90- 103: ipfqt FfelLAsQqFpvaT firtp PH4H_PSEAE : 91- 103: pfqtf Fel-LAsQqFpvaT firtp PH4H_RAT : 254- 266: lssrd FlggLAfRvFhc-T qyirh TR5H_HUMAN : 241- 253: lsprd FlsgLAfRvFhc-T qyvrh TR5H_MOUSE : 244- 256: lsprd FlsgLAfRvFhc-T qyvrh TR5H_RABIT : 241- 253: lsprd FlsgLAfRvFhc-T qyvrh TR5H_RAT : 241- 253: lsprd FlsgLAfRvFhc-T qyvrh TY3H_BOVIN : 293- 305: lsard FlasLAfRvFqc-T qyirh TY3H_DROME : 307- 319: ltard FlasLAfRiFqs-T qyvrh TY3H_HUMAN : 330- 342: lsard FlasLAfRvFqc-T qyirh TY3H_MOUSE : 300- 312: lsard FlasLAfRvFqc-T qyirh TY3H_PHASP : 293- 305: lsard FlasLAfRvFqc-T qyirh TY3H_RAT : 300- 312: lsard FlasLAfRvFqc-T qyirh S 19: 21.4356 24( 16) G-[AGL]-[AG]-x-L-x(1,2)-S-x(1,2)-E Occurences: 24(16) PH4H_CHRVO : 197- 206: gmriy GAGiLs-SksE siycl PH4H_DROME : 343- 352: elkay GAGlLs-SygE leycl PH4H_HUMAN : 344- 353: sikay GAGlLs-SfgE lqycl PH4H_MOUSE : 344- 353: sikay GAGlLs-SfgE lqycl PH4H_PSEAE : 180- 189: gkriy GGGiLs-SpkE tvysl PH4H_RAT : 344- 353: sikay GAGlLs-SfgE lqycl TR5H_HUMAN : 294- 303: fsqei GLAsLgaSe-E avqkl TR5H_HUMAN : 331- 340: qlrvf GAGlLs-SisE lkhal TR5H_MOUSE : 297- 306: fsqei GLAsLgaSe-E tvqkl TR5H_MOUSE : 334- 343: qlrvf GAGlLs-SisE lkhal TR5H_RABIT : 294- 303: fsqei GLAsLgaSe-E avqkl TR5H_RABIT : 331- 340: qlrvf GAGlLs-SisE lkhvl TR5H_RAT : 294- 303: fsqei GLAsLgaSe-E tvqkl TR5H_RAT : 331- 340: qlrvf GAGlLs-SisE lrhal TY3H_BOVIN : 346- 355: fsqdi GLAsLgvSd-E eiekl TY3H_BOVIN : 383- 392: evnay GAGlLs-SygE llhsl TY3H_DROME : 360- 369: fsqei GLAsLgaSd-E eiekl TY3H_HUMAN : 383- 392: fsqdi GLAsLgaSd-E eiekl TY3H_HUMAN : 420- 429: evkay GAGlLs-SygE llhcl TY3H_MOUSE : 353- 362: fsqdi GLAsLgaSd-E eiekl TY3H_MOUSE : 390- 399: elkay GAGlLs-SygE llhsl TY3H_PHASP : 383- 392: ivkay GAGlLs-SygE lihsl TY3H_RAT : 353- 362: fsqdi GLAsLgaSd-E eiekl TY3H_RAT : 390- 399: elkay GAGlLs-SygE llhsl T 20: 21.0128 16( 16) L-[AGS]-x(2)-A-x(2,3)-F-x(3)-Q-x-[AILV] Occurences: 16(16) PH4H_CHRVO : 20- 33: rknvg LShdAnd-FtlpQpL drysa PH4H_DROME : 254- 268: ssrdf LAglAfrvFhstQyI rhpsk PH4H_HUMAN : 255- 269: ssrdf LGglAfrvFhctQyI rhgsk PH4H_MOUSE : 255- 269: ssrdf LGglAfrvFhctQyI rhgsk PH4H_PSEAE : 249- 262: heamr LGlhApl-FppkQaA PH4H_RAT : 255- 269: ssrdf LGglAfrvFhctQyI rhgsk TR5H_HUMAN : 242- 256: sprdf LSglAfrvFhctQyV rhssd TR5H_MOUSE : 245- 259: sprdf LSglAfrvFhctQyV rhssd TR5H_RABIT : 242- 256: sprdf LSglAfrvFhctQyV rhssd TR5H_RAT : 242- 256: sprdf LSglAfrvFhctQyV rhssd TY3H_BOVIN : 294- 308: sardf LAslAfrvFqctQyI rhass TY3H_DROME : 308- 322: tardf LAslAfriFqstQyV rhvns TY3H_HUMAN : 331- 345: sardf LAslAfrvFqctQyI rhass TY3H_MOUSE : 301- 315: sardf LAslAfrvFqctQyI rhass TY3H_PHASP : 294- 308: sardf LAslAfrvFqctQyI rhass TY3H_RAT : 301- 315: sardf LAslAfrvFqctQyI rhass Number of patterns evaluated by Pratt:6225 Total running time: 9 seconds