------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 21 sequences from file ATPASE_NA_K_BETA_2 PATTERN CONSERVATION: CM: min Nr of Seqs to Match 21 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 50 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename ATPASE_NA_K_BETA_2.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: ATHB_CANFA 290 ATHB_PIG 290 ATHB_RABIT 291 ATHB_RAT 294 ATNB_ARTSA 315 ATNB_BUFMA 303 ATNB_CANFA 303 ATNB_CHICK 305 ATNB_HUMAN 303 ATNB_MOUSE 304 ATNB_PIG 303 ATNB_RAT 304 ATNB_SHEEP 303 ATNB_TORCA 305 ATNC_BUFMA 299 ATNC_CHICK 280 ATNC_HUMAN 290 ATNC_MOUSE 290 ATNC_RAT 290 ATND_BUFMA 279 ATND_XENLA 277 Pratt run started at Thu Feb 6 18:57:19 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 33.3604 21( 21) G-R-T-x(3)-W-x(2)-I-x(3)-Y-x(2)-F-Y 2: 29.1904 21( 21) R-T-x(3)-W-x(2)-I-x(3)-Y-x(2)-F-Y 3: 25.0203 21( 21) T-x(3)-W-x(2)-I-x(3)-Y-x(2)-F-Y 4: 20.8503 21( 21) G-x(3)-G-x-P-C-x(3)-K 5: 20.8503 21( 21) W-x(2)-I-x(3)-Y-x(2)-F-Y 6: 19.8503 22( 21) G-x(1,3)-G-x-P-C-x(3)-K 7: 18.8503 22( 21) G-x(1,3)-G-x(1,3)-P-C-x(3)-K 8: 16.6802 21( 21) G-x-P-C-x(3)-K 9: 16.6802 21( 21) I-x(3)-Y-x(2)-F-Y 10: 16.1802 22( 21) G-x(5)-Y-x(0,1)-P-Y 11: 15.1802 27( 21) I-x(3)-Y-x(0,2)-F-x(0,1)-Y 12: 15.1802 22( 21) G-x(3,4)-G-x-P-x(1,3)-I 13: 15.1802 22( 21) L-x(1,3)-T-x(5)-P-x(1,2)-Y 14: 14.6802 28( 21) P-G-x(0,2)-L-x(1,3)-P 15: 12.5102 26( 21) Y-x-P-Y 16: 12.5102 31( 21) Y-x-P-x(2)-G 17: 12.5102 21( 21) P-C-x(3)-K 18: 12.5102 21( 21) T-x(5)-P-x-Y 19: 12.5102 21( 21) Y-x(2)-F-Y 20: 12.0102 22( 21) G-R-x(0,1)-T Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 93.7422 21( 21) G-R-T-[AGLP]-x-[RS]-W-x(2)-I-x-[ILV]-[FY]-Y-[ALV]-[AIV]-F-Y-[AGTV]-x(2)-[AST]-[AG]-[FILMV]-F-x(3)-[ILM]-x(2)-[FLM]-x(2)-T-[ILV]-[DS]-x(3)-P-x-[WY]-x-[DN]-x(4)-[IP] B 2: 93.7422 21( 21) R-T-[AGLP]-x-[RS]-W-x(2)-I-x-[ILV]-[FY]-Y-[ALV]-[AIV]-F-Y-[AGTV]-x(2)-[AST]-[AG]-[FILMV]-F-x(3)-[ILM]-x(2)-[FLM]-x(2)-T-[ILV]-[DS]-x(3)-P-x-[WY]-x-[DN]-x(4)-[IP]-G C 3: 92.1696 21( 21) T-[AGLP]-x-[RS]-W-x(2)-I-x-[ILV]-[FY]-Y-[ALV]-[AIV]-F-Y-[AGTV]-x(2)-[AST]-[AG]-[FILMV]-F-x(3)-[ILM]-x(2)-[FLM]-x(2)-T-[ILV]-[DS]-x(3)-P-x-[WY]-x-[DN]-x(4)-[IP]-G-[ALV] D 4: 90.5542 21( 21) G-R-T-[AGLP]-x-[RS]-W-x(2)-I-x-[ILV]-[FY]-Y-[ALV]-[AIV]-F-Y-[AGTV]-x(2)-[AST]-[AG]-[FILMV]-F-x(3)-[ILM]-x(2)-[FLM]-x(2)-T-[ILV]-[DS]-x(3)-P-x-[WY]-x-[DN] E 5: 85.7953 21( 21) W-x(2)-I-x-[ILV]-[FY]-Y-[ALV]-[AIV]-F-Y-[AGTV]-x(2)-[AST]-[AG]-[FILMV]-F-x(3)-[ILM]-x(2)-[FLM]-x(2)-T-[ILV]-[DS]-x(3)-P-x-[WY]-x-[DN]-x(4)-[IP]-G-[ALV]-x(3)-[LP] F 6: 81.6252 21( 21) I-x-[ILV]-[FY]-Y-[ALV]-[AIV]-F-Y-[AGTV]-x(2)-[AST]-[AG]-[FILMV]-F-x(3)-[ILM]-x(2)-[FLM]-x(2)-T-[ILV]-[DS]-x(3)-P-x-[WY]-x-[DN]-x(4)-[IP]-G-[ALV]-x(3)-[LP] G 7: 72.1778 21( 21) I-x-[ILV]-x-Y-x(0,2)-F-Y-[AGTV]-x(2)-[AST]-[AG]-[FILMV]-F-x(3)-[ILM]-x(2)-[FLM]-x(2)-T-[ILV]-[DS]-x(3)-P-x-[WY]-x-[DN]-x(4)-[IP]-G-[ALV]-x(3)-[LP] H 8: 71.6088 21( 21) Y-[ALV]-[AIV]-F-Y-[AGTV]-x(2)-[AST]-[AG]-[FILMV]-F-x(3)-[ILM]-x(2)-[FLM]-x(2)-T-[ILV]-[DS]-x(3)-P-x-[WY]-x-[DN]-x(4)-[IP]-G-[ALV]-x(3)-[LP] I 9: 45.7871 21( 21) G-[FY]-x(2)-G-x-P-C-[FILV]-[FIL]-[AIV]-K-[ILM]-[NT]-[DR]-[FIV]-[GILV] J 10: 41.6025 22( 21) G-x(1,3)-G-x-P-C-[FILV]-[FIL]-[AIV]-K-[ILM]-[NT]-[DR]-[FIV]-[GILV] K 11: 40.6025 22( 21) G-x(1,3)-G-x(1,3)-P-C-[FILV]-[FIL]-[AIV]-K-[ILM]-[NT]-[DR]-[FIV]-[GILV] L 12: 38.4325 21( 21) G-x-P-C-[FILV]-[FIL]-[AIV]-K-[ILM]-[NT]-[DR]-[FIV]-[GILV] M 13: 34.2624 21( 21) P-C-[FILV]-[FIL]-[AIV]-K-[ILM]-[NT]-[DR]-[FIV]-[GILV] N 14: 33.8281 22( 21) L-x(1,3)-T-x(5)-P-x(1,2)-Y-x-[DS]-[QRS]-[AILV]-x(2)-P-[EG]-x(4)-[DP] O 15: 19.4533 22( 21) G-x(5)-Y-x(0,1)-P-Y-x-[GN] P 16: 18.9678 21( 21) Y-[FY]-P-Y-x-[GN] Q 17: 15.6947 21( 21) Y-x-P-[FY]-x-G R 18: 15.1802 22( 21) G-x(3,4)-G-x-P-x(1,3)-I S 19: 14.7460 21( 21) T-[ILPV]-x(4)-P-x-Y T 20: 14.6802 28( 21) P-G-x(0,2)-L-x(1,3)-P Best patterns with alignements: fitness hits(seqs) Pattern A 1: 93.7422 21( 21) G-R-T-[AGLP]-x-[RS]-W-x(2)-I-x-[ILV]-[FY]-Y-[ALV]-[AIV]-F-Y-[AGTV]-x(2)-[AST]-[AG]-[FILMV]-F-x(3)-[ILM]-x(2)-[FLM]-x(2)-T-[ILV]-[DS]-x(3)-P-x-[WY]-x-[DN]-x(4)-[IP] Occurences: 21(21) ATHB_CANFA : 31- 80: tgqml GRTLsRWvwIsLYYVAFYVvmTGIFalcIytLmcTLDpytPdYqDqlksP gvtlr ATHB_PIG : 31- 80: tgqml GRTLsRWvwIsLYYVAFYVvmSGIFalcIyvLmrTIDpytPdYqDqlksP gvtlr ATHB_RABIT : 31- 80: tgqml GRTLsRWvwIsLYYVAFYVvmTGLFalcIyvLmqTIDpytPdYqDqlksP gvtlr ATHB_RAT : 31- 80: tgqml GRTPaRWvwIsLYYAAFYVvmTGLFalcIyvLmqTIDpytPdYqDqlksP gvtlr ATNB_ARTSA : 37- 86: tsqfm GRTAgSWakItIFYVIFYTllAGFFagmLmiFyqTLDfkiPkWqNkdslI ganpg ATNB_BUFMA : 27- 76: kkefm GRTGsSWfkIlLFYLVFYGclAGIFigtIqvLllTLSiyePkYqDrvapP gltqv ATNB_CANFA : 26- 75: kkefl GRTGgSWfkIlLFYVIFYGclAGIFigtIqvMllTISefkPtYqDrvapP gltqi ATNB_CHICK : 27- 76: kkell GRTGgSWfkIlLFYVIFYGclAGIFigtIqvMllTVSefePkYqDrvapP gltqv ATNB_HUMAN : 26- 75: kkefl GRTGgSWfkIlLFYVIFYGclAGIFigtIqvMllTISefkPtYqDrvapP gltqi ATNB_MOUSE : 26- 75: kkefl GRTGgSWfkIlLFYVIFYGclAGIFigtIqvMllTISelkPtYqDrvapP gltqi ATNB_PIG : 26- 75: kkefl GRTGgSWfkIlLFYVIFYGclAGIFigtIqvMllTISefkPtYqDrvapP gltqi ATNB_RAT : 26- 75: kkefl GRTGgSWfkIlLFYVIFYGclAGIFigtIqvMllTISelkPtYqDrvapP gltqi ATNB_SHEEP : 26- 75: kkefl GRTGgSWfkIlLFYVIFYGclAGIFigtIqvMllTISefkPtYqDrvapP gltqi ATNB_TORCA : 27- 76: kkqvl GRTGtSWfkIfVFYLIFYGclAGIFigtIqvMllTISdfePkYqDrvapP glshs ATNC_BUFMA : 31- 80: trefm GRTGsSWalIlLFYVVFYAflTAVFslsLwvMlqTIDeytPkYaDrlanP glmir ATNC_CHICK : 30- 79: sgefl GRTAkSWglIlLFYLVFYGflAALFtftMwvMlqTLSndiPkYrDrissP glmis ATNC_HUMAN : 31- 80: thqfm GRTGtSWafIlLFYLVFYGfpTAMFtltMwvMlqTVSdhtPkYqDrlatP glmir ATNC_MOUSE : 31- 80: thqfm GRTGtSWafIlLFYLVFYGflTAMFsltMwvMlqTVSdhtPkYqDrlatP glmir ATNC_RAT : 31- 80: thqfm GRTGtSWafIlLFYLVFYGflTAMFtltMwvMlqTVSdhtPkYqDrlatP glmir ATND_BUFMA : 30- 79: sgeil GRTAsSWalIlLFYLVFYGflAGLFtltMwvMlqTLDdsvPkYrDrvsfP glmis ATND_XENLA : 30- 79: kgefm GRTAsSWalIlLFYLVFYGflAGLFtltMwvMlqTLDdsvPkYrDrvssP glmis B 2: 93.7422 21( 21) R-T-[AGLP]-x-[RS]-W-x(2)-I-x-[ILV]-[FY]-Y-[ALV]-[AIV]-F-Y-[AGTV]-x(2)-[AST]-[AG]-[FILMV]-F-x(3)-[ILM]-x(2)-[FLM]-x(2)-T-[ILV]-[DS]-x(3)-P-x-[WY]-x-[DN]-x(4)-[IP]-G Occurences: 21(21) ATHB_CANFA : 32- 81: gqmlg RTLsRWvwIsLYYVAFYVvmTGIFalcIytLmcTLDpytPdYqDqlksPG vtlrp ATHB_PIG : 32- 81: gqmlg RTLsRWvwIsLYYVAFYVvmSGIFalcIyvLmrTIDpytPdYqDqlksPG vtlrp ATHB_RABIT : 32- 81: gqmlg RTLsRWvwIsLYYVAFYVvmTGLFalcIyvLmqTIDpytPdYqDqlksPG vtlrp ATHB_RAT : 32- 81: gqmlg RTPaRWvwIsLYYAAFYVvmTGLFalcIyvLmqTIDpytPdYqDqlksPG vtlrp ATNB_ARTSA : 38- 87: sqfmg RTAgSWakItIFYVIFYTllAGFFagmLmiFyqTLDfkiPkWqNkdslIG anpgl ATNB_BUFMA : 28- 77: kefmg RTGsSWfkIlLFYLVFYGclAGIFigtIqvLllTLSiyePkYqDrvapPG ltqvp ATNB_CANFA : 27- 76: keflg RTGgSWfkIlLFYVIFYGclAGIFigtIqvMllTISefkPtYqDrvapPG ltqip ATNB_CHICK : 28- 77: kellg RTGgSWfkIlLFYVIFYGclAGIFigtIqvMllTVSefePkYqDrvapPG ltqvp ATNB_HUMAN : 27- 76: keflg RTGgSWfkIlLFYVIFYGclAGIFigtIqvMllTISefkPtYqDrvapPG ltqip ATNB_MOUSE : 27- 76: keflg RTGgSWfkIlLFYVIFYGclAGIFigtIqvMllTISelkPtYqDrvapPG ltqip ATNB_PIG : 27- 76: keflg RTGgSWfkIlLFYVIFYGclAGIFigtIqvMllTISefkPtYqDrvapPG ltqip ATNB_RAT : 27- 76: keflg RTGgSWfkIlLFYVIFYGclAGIFigtIqvMllTISelkPtYqDrvapPG ltqip ATNB_SHEEP : 27- 76: keflg RTGgSWfkIlLFYVIFYGclAGIFigtIqvMllTISefkPtYqDrvapPG ltqip ATNB_TORCA : 28- 77: kqvlg RTGtSWfkIfVFYLIFYGclAGIFigtIqvMllTISdfePkYqDrvapPG lshsp ATNC_BUFMA : 32- 81: refmg RTGsSWalIlLFYVVFYAflTAVFslsLwvMlqTIDeytPkYaDrlanPG lmirp ATNC_CHICK : 31- 80: geflg RTAkSWglIlLFYLVFYGflAALFtftMwvMlqTLSndiPkYrDrissPG lmisp ATNC_HUMAN : 32- 81: hqfmg RTGtSWafIlLFYLVFYGfpTAMFtltMwvMlqTVSdhtPkYqDrlatPG lmirp ATNC_MOUSE : 32- 81: hqfmg RTGtSWafIlLFYLVFYGflTAMFsltMwvMlqTVSdhtPkYqDrlatPG lmirp ATNC_RAT : 32- 81: hqfmg RTGtSWafIlLFYLVFYGflTAMFtltMwvMlqTVSdhtPkYqDrlatPG lmirp ATND_BUFMA : 31- 80: geilg RTAsSWalIlLFYLVFYGflAGLFtltMwvMlqTLDdsvPkYrDrvsfPG lmisp ATND_XENLA : 31- 80: gefmg RTAsSWalIlLFYLVFYGflAGLFtltMwvMlqTLDdsvPkYrDrvssPG lmisp C 3: 92.1696 21( 21) T-[AGLP]-x-[RS]-W-x(2)-I-x-[ILV]-[FY]-Y-[ALV]-[AIV]-F-Y-[AGTV]-x(2)-[AST]-[AG]-[FILMV]-F-x(3)-[ILM]-x(2)-[FLM]-x(2)-T-[ILV]-[DS]-x(3)-P-x-[WY]-x-[DN]-x(4)-[IP]-G-[ALV] Occurences: 21(21) ATHB_CANFA : 33- 82: qmlgr TLsRWvwIsLYYVAFYVvmTGIFalcIytLmcTLDpytPdYqDqlksPGV tlrpd ATHB_PIG : 33- 82: qmlgr TLsRWvwIsLYYVAFYVvmSGIFalcIyvLmrTIDpytPdYqDqlksPGV tlrpd ATHB_RABIT : 33- 82: qmlgr TLsRWvwIsLYYVAFYVvmTGLFalcIyvLmqTIDpytPdYqDqlksPGV tlrpd ATHB_RAT : 33- 82: qmlgr TPaRWvwIsLYYAAFYVvmTGLFalcIyvLmqTIDpytPdYqDqlksPGV tlrpd ATNB_ARTSA : 39- 88: qfmgr TAgSWakItIFYVIFYTllAGFFagmLmiFyqTLDfkiPkWqNkdslIGA npglg ATNB_BUFMA : 29- 78: efmgr TGsSWfkIlLFYLVFYGclAGIFigtIqvLllTLSiyePkYqDrvapPGL tqvpr ATNB_CANFA : 28- 77: eflgr TGgSWfkIlLFYVIFYGclAGIFigtIqvMllTISefkPtYqDrvapPGL tqipq ATNB_CHICK : 29- 78: ellgr TGgSWfkIlLFYVIFYGclAGIFigtIqvMllTVSefePkYqDrvapPGL tqvpq ATNB_HUMAN : 28- 77: eflgr TGgSWfkIlLFYVIFYGclAGIFigtIqvMllTISefkPtYqDrvapPGL tqipq ATNB_MOUSE : 28- 77: eflgr TGgSWfkIlLFYVIFYGclAGIFigtIqvMllTISelkPtYqDrvapPGL tqipq ATNB_PIG : 28- 77: eflgr TGgSWfkIlLFYVIFYGclAGIFigtIqvMllTISefkPtYqDrvapPGL tqipq ATNB_RAT : 28- 77: eflgr TGgSWfkIlLFYVIFYGclAGIFigtIqvMllTISelkPtYqDrvapPGL tqipq ATNB_SHEEP : 28- 77: eflgr TGgSWfkIlLFYVIFYGclAGIFigtIqvMllTISefkPtYqDrvapPGL tqipq ATNB_TORCA : 29- 78: qvlgr TGtSWfkIfVFYLIFYGclAGIFigtIqvMllTISdfePkYqDrvapPGL shspy ATNC_BUFMA : 33- 82: efmgr TGsSWalIlLFYVVFYAflTAVFslsLwvMlqTIDeytPkYaDrlanPGL mirpk ATNC_CHICK : 32- 81: eflgr TAkSWglIlLFYLVFYGflAALFtftMwvMlqTLSndiPkYrDrissPGL mispk ATNC_HUMAN : 33- 82: qfmgr TGtSWafIlLFYLVFYGfpTAMFtltMwvMlqTVSdhtPkYqDrlatPGL mirpk ATNC_MOUSE : 33- 82: qfmgr TGtSWafIlLFYLVFYGflTAMFsltMwvMlqTVSdhtPkYqDrlatPGL mirpk ATNC_RAT : 33- 82: qfmgr TGtSWafIlLFYLVFYGflTAMFtltMwvMlqTVSdhtPkYqDrlatPGL mirpk ATND_BUFMA : 32- 81: eilgr TAsSWalIlLFYLVFYGflAGLFtltMwvMlqTLDdsvPkYrDrvsfPGL mispk ATND_XENLA : 32- 81: efmgr TAsSWalIlLFYLVFYGflAGLFtltMwvMlqTLDdsvPkYrDrvssPGL mispk D 4: 90.5542 21( 21) G-R-T-[AGLP]-x-[RS]-W-x(2)-I-x-[ILV]-[FY]-Y-[ALV]-[AIV]-F-Y-[AGTV]-x(2)-[AST]-[AG]-[FILMV]-F-x(3)-[ILM]-x(2)-[FLM]-x(2)-T-[ILV]-[DS]-x(3)-P-x-[WY]-x-[DN] Occurences: 21(21) ATHB_CANFA : 31- 75: tgqml GRTLsRWvwIsLYYVAFYVvmTGIFalcIytLmcTLDpytPdYqD qlksp ATHB_PIG : 31- 75: tgqml GRTLsRWvwIsLYYVAFYVvmSGIFalcIyvLmrTIDpytPdYqD qlksp ATHB_RABIT : 31- 75: tgqml GRTLsRWvwIsLYYVAFYVvmTGLFalcIyvLmqTIDpytPdYqD qlksp ATHB_RAT : 31- 75: tgqml GRTPaRWvwIsLYYAAFYVvmTGLFalcIyvLmqTIDpytPdYqD qlksp ATNB_ARTSA : 37- 81: tsqfm GRTAgSWakItIFYVIFYTllAGFFagmLmiFyqTLDfkiPkWqN kdsli ATNB_BUFMA : 27- 71: kkefm GRTGsSWfkIlLFYLVFYGclAGIFigtIqvLllTLSiyePkYqD rvapp ATNB_CANFA : 26- 70: kkefl GRTGgSWfkIlLFYVIFYGclAGIFigtIqvMllTISefkPtYqD rvapp ATNB_CHICK : 27- 71: kkell GRTGgSWfkIlLFYVIFYGclAGIFigtIqvMllTVSefePkYqD rvapp ATNB_HUMAN : 26- 70: kkefl GRTGgSWfkIlLFYVIFYGclAGIFigtIqvMllTISefkPtYqD rvapp ATNB_MOUSE : 26- 70: kkefl GRTGgSWfkIlLFYVIFYGclAGIFigtIqvMllTISelkPtYqD rvapp ATNB_PIG : 26- 70: kkefl GRTGgSWfkIlLFYVIFYGclAGIFigtIqvMllTISefkPtYqD rvapp ATNB_RAT : 26- 70: kkefl GRTGgSWfkIlLFYVIFYGclAGIFigtIqvMllTISelkPtYqD rvapp ATNB_SHEEP : 26- 70: kkefl GRTGgSWfkIlLFYVIFYGclAGIFigtIqvMllTISefkPtYqD rvapp ATNB_TORCA : 27- 71: kkqvl GRTGtSWfkIfVFYLIFYGclAGIFigtIqvMllTISdfePkYqD rvapp ATNC_BUFMA : 31- 75: trefm GRTGsSWalIlLFYVVFYAflTAVFslsLwvMlqTIDeytPkYaD rlanp ATNC_CHICK : 30- 74: sgefl GRTAkSWglIlLFYLVFYGflAALFtftMwvMlqTLSndiPkYrD rissp ATNC_HUMAN : 31- 75: thqfm GRTGtSWafIlLFYLVFYGfpTAMFtltMwvMlqTVSdhtPkYqD rlatp ATNC_MOUSE : 31- 75: thqfm GRTGtSWafIlLFYLVFYGflTAMFsltMwvMlqTVSdhtPkYqD rlatp ATNC_RAT : 31- 75: thqfm GRTGtSWafIlLFYLVFYGflTAMFtltMwvMlqTVSdhtPkYqD rlatp ATND_BUFMA : 30- 74: sgeil GRTAsSWalIlLFYLVFYGflAGLFtltMwvMlqTLDdsvPkYrD rvsfp ATND_XENLA : 30- 74: kgefm GRTAsSWalIlLFYLVFYGflAGLFtltMwvMlqTLDdsvPkYrD rvssp E 5: 85.7953 21( 21) W-x(2)-I-x-[ILV]-[FY]-Y-[ALV]-[AIV]-F-Y-[AGTV]-x(2)-[AST]-[AG]-[FILMV]-F-x(3)-[ILM]-x(2)-[FLM]-x(2)-T-[ILV]-[DS]-x(3)-P-x-[WY]-x-[DN]-x(4)-[IP]-G-[ALV]-x(3)-[LP] Occurences: 21(21) ATHB_CANFA : 37- 86: rtlsr WvwIsLYYVAFYVvmTGIFalcIytLmcTLDpytPdYqDqlksPGVtlrP dvyge ATHB_PIG : 37- 86: rtlsr WvwIsLYYVAFYVvmSGIFalcIyvLmrTIDpytPdYqDqlksPGVtlrP dvyge ATHB_RABIT : 37- 86: rtlsr WvwIsLYYVAFYVvmTGLFalcIyvLmqTIDpytPdYqDqlksPGVtlrP dvyge ATHB_RAT : 37- 86: rtpar WvwIsLYYAAFYVvmTGLFalcIyvLmqTIDpytPdYqDqlksPGVtlrP dvyge ATNB_ARTSA : 43- 92: rtags WakItIFYVIFYTllAGFFagmLmiFyqTLDfkiPkWqNkdslIGAnpgL gfrpm ATNB_BUFMA : 33- 82: rtgss WfkIlLFYLVFYGclAGIFigtIqvLllTLSiyePkYqDrvapPGLtqvP ravka ATNB_CANFA : 32- 81: rtggs WfkIlLFYVIFYGclAGIFigtIqvMllTISefkPtYqDrvapPGLtqiP qiqkt ATNB_CHICK : 33- 82: rtggs WfkIlLFYVIFYGclAGIFigtIqvMllTVSefePkYqDrvapPGLtqvP qvqkt ATNB_HUMAN : 32- 81: rtggs WfkIlLFYVIFYGclAGIFigtIqvMllTISefkPtYqDrvapPGLtqiP qiqkt ATNB_MOUSE : 32- 81: rtggs WfkIlLFYVIFYGclAGIFigtIqvMllTISelkPtYqDrvapPGLtqiP qiqkt ATNB_PIG : 32- 81: rtggs WfkIlLFYVIFYGclAGIFigtIqvMllTISefkPtYqDrvapPGLtqiP qsqkt ATNB_RAT : 32- 81: rtggs WfkIlLFYVIFYGclAGIFigtIqvMllTISelkPtYqDrvapPGLtqiP qiqkt ATNB_SHEEP : 32- 81: rtggs WfkIlLFYVIFYGclAGIFigtIqvMllTISefkPtYqDrvapPGLtqiP qiqkt ATNB_TORCA : 33- 82: rtgts WfkIfVFYLIFYGclAGIFigtIqvMllTISdfePkYqDrvapPGLshsP yavkt ATNC_BUFMA : 37- 86: rtgss WalIlLFYVVFYAflTAVFslsLwvMlqTIDeytPkYaDrlanPGLmirP kmdtt ATNC_CHICK : 36- 85: rtaks WglIlLFYLVFYGflAALFtftMwvMlqTLSndiPkYrDrissPGLmisP kpdta ATNC_HUMAN : 37- 86: rtgts WafIlLFYLVFYGfpTAMFtltMwvMlqTVSdhtPkYqDrlatPGLmirP ktenl ATNC_MOUSE : 37- 86: rtgts WafIlLFYLVFYGflTAMFsltMwvMlqTVSdhtPkYqDrlatPGLmirP ktenl ATNC_RAT : 37- 86: rtgts WafIlLFYLVFYGflTAMFtltMwvMlqTVSdhtPkYqDrlatPGLmirP ktenl ATND_BUFMA : 36- 85: rtass WalIlLFYLVFYGflAGLFtltMwvMlqTLDdsvPkYrDrvsfPGLmisP ksagl ATND_XENLA : 36- 85: rtass WalIlLFYLVFYGflAGLFtltMwvMlqTLDdsvPkYrDrvssPGLmisP ksagl F 6: 81.6252 21( 21) I-x-[ILV]-[FY]-Y-[ALV]-[AIV]-F-Y-[AGTV]-x(2)-[AST]-[AG]-[FILMV]-F-x(3)-[ILM]-x(2)-[FLM]-x(2)-T-[ILV]-[DS]-x(3)-P-x-[WY]-x-[DN]-x(4)-[IP]-G-[ALV]-x(3)-[LP] Occurences: 21(21) ATHB_CANFA : 40- 86: srwvw IsLYYVAFYVvmTGIFalcIytLmcTLDpytPdYqDqlksPGVtlrP dvyge ATHB_PIG : 40- 86: srwvw IsLYYVAFYVvmSGIFalcIyvLmrTIDpytPdYqDqlksPGVtlrP dvyge ATHB_RABIT : 40- 86: srwvw IsLYYVAFYVvmTGLFalcIyvLmqTIDpytPdYqDqlksPGVtlrP dvyge ATHB_RAT : 40- 86: arwvw IsLYYAAFYVvmTGLFalcIyvLmqTIDpytPdYqDqlksPGVtlrP dvyge ATNB_ARTSA : 46- 92: gswak ItIFYVIFYTllAGFFagmLmiFyqTLDfkiPkWqNkdslIGAnpgL gfrpm ATNB_BUFMA : 36- 82: sswfk IlLFYLVFYGclAGIFigtIqvLllTLSiyePkYqDrvapPGLtqvP ravka ATNB_CANFA : 35- 81: gswfk IlLFYVIFYGclAGIFigtIqvMllTISefkPtYqDrvapPGLtqiP qiqkt ATNB_CHICK : 36- 82: gswfk IlLFYVIFYGclAGIFigtIqvMllTVSefePkYqDrvapPGLtqvP qvqkt ATNB_HUMAN : 35- 81: gswfk IlLFYVIFYGclAGIFigtIqvMllTISefkPtYqDrvapPGLtqiP qiqkt ATNB_MOUSE : 35- 81: gswfk IlLFYVIFYGclAGIFigtIqvMllTISelkPtYqDrvapPGLtqiP qiqkt ATNB_PIG : 35- 81: gswfk IlLFYVIFYGclAGIFigtIqvMllTISefkPtYqDrvapPGLtqiP qsqkt ATNB_RAT : 35- 81: gswfk IlLFYVIFYGclAGIFigtIqvMllTISelkPtYqDrvapPGLtqiP qiqkt ATNB_SHEEP : 35- 81: gswfk IlLFYVIFYGclAGIFigtIqvMllTISefkPtYqDrvapPGLtqiP qiqkt ATNB_TORCA : 36- 82: tswfk IfVFYLIFYGclAGIFigtIqvMllTISdfePkYqDrvapPGLshsP yavkt ATNC_BUFMA : 40- 86: sswal IlLFYVVFYAflTAVFslsLwvMlqTIDeytPkYaDrlanPGLmirP kmdtt ATNC_CHICK : 39- 85: kswgl IlLFYLVFYGflAALFtftMwvMlqTLSndiPkYrDrissPGLmisP kpdta ATNC_HUMAN : 40- 86: tswaf IlLFYLVFYGfpTAMFtltMwvMlqTVSdhtPkYqDrlatPGLmirP ktenl ATNC_MOUSE : 40- 86: tswaf IlLFYLVFYGflTAMFsltMwvMlqTVSdhtPkYqDrlatPGLmirP ktenl ATNC_RAT : 40- 86: tswaf IlLFYLVFYGflTAMFtltMwvMlqTVSdhtPkYqDrlatPGLmirP ktenl ATND_BUFMA : 39- 85: sswal IlLFYLVFYGflAGLFtltMwvMlqTLDdsvPkYrDrvsfPGLmisP ksagl ATND_XENLA : 39- 85: sswal IlLFYLVFYGflAGLFtltMwvMlqTLDdsvPkYrDrvssPGLmisP ksagl G 7: 72.1778 21( 21) I-x-[ILV]-x-Y-x(0,2)-F-Y-[AGTV]-x(2)-[AST]-[AG]-[FILMV]-F-x(3)-[ILM]-x(2)-[FLM]-x(2)-T-[ILV]-[DS]-x(3)-P-x-[WY]-x-[DN]-x(4)-[IP]-G-[ALV]-x(3)-[LP] Occurences: 21(21) ATHB_CANFA : 40- 86: srwvw IsLyYvaFYVvmTGIFalcIytLmcTLDpytPdYqDqlksPGVtlrP dvyge ATHB_PIG : 40- 86: srwvw IsLyYvaFYVvmSGIFalcIyvLmrTIDpytPdYqDqlksPGVtlrP dvyge ATHB_RABIT : 40- 86: srwvw IsLyYvaFYVvmTGLFalcIyvLmqTIDpytPdYqDqlksPGVtlrP dvyge ATHB_RAT : 40- 86: arwvw IsLyYaaFYVvmTGLFalcIyvLmqTIDpytPdYqDqlksPGVtlrP dvyge ATNB_ARTSA : 46- 92: gswak ItIfYviFYTllAGFFagmLmiFyqTLDfkiPkWqNkdslIGAnpgL gfrpm ATNB_BUFMA : 36- 82: sswfk IlLfYlvFYGclAGIFigtIqvLllTLSiyePkYqDrvapPGLtqvP ravka ATNB_CANFA : 35- 81: gswfk IlLfYviFYGclAGIFigtIqvMllTISefkPtYqDrvapPGLtqiP qiqkt ATNB_CHICK : 36- 82: gswfk IlLfYviFYGclAGIFigtIqvMllTVSefePkYqDrvapPGLtqvP qvqkt ATNB_HUMAN : 35- 81: gswfk IlLfYviFYGclAGIFigtIqvMllTISefkPtYqDrvapPGLtqiP qiqkt ATNB_MOUSE : 35- 81: gswfk IlLfYviFYGclAGIFigtIqvMllTISelkPtYqDrvapPGLtqiP qiqkt ATNB_PIG : 35- 81: gswfk IlLfYviFYGclAGIFigtIqvMllTISefkPtYqDrvapPGLtqiP qsqkt ATNB_RAT : 35- 81: gswfk IlLfYviFYGclAGIFigtIqvMllTISelkPtYqDrvapPGLtqiP qiqkt ATNB_SHEEP : 35- 81: gswfk IlLfYviFYGclAGIFigtIqvMllTISefkPtYqDrvapPGLtqiP qiqkt ATNB_TORCA : 36- 82: tswfk IfVfYliFYGclAGIFigtIqvMllTISdfePkYqDrvapPGLshsP yavkt ATNC_BUFMA : 40- 86: sswal IlLfYvvFYAflTAVFslsLwvMlqTIDeytPkYaDrlanPGLmirP kmdtt ATNC_CHICK : 39- 85: kswgl IlLfYlvFYGflAALFtftMwvMlqTLSndiPkYrDrissPGLmisP kpdta ATNC_HUMAN : 40- 86: tswaf IlLfYlvFYGfpTAMFtltMwvMlqTVSdhtPkYqDrlatPGLmirP ktenl ATNC_MOUSE : 40- 86: tswaf IlLfYlvFYGflTAMFsltMwvMlqTVSdhtPkYqDrlatPGLmirP ktenl ATNC_RAT : 40- 86: tswaf IlLfYlvFYGflTAMFtltMwvMlqTVSdhtPkYqDrlatPGLmirP ktenl ATND_BUFMA : 39- 85: sswal IlLfYlvFYGflAGLFtltMwvMlqTLDdsvPkYrDrvsfPGLmisP ksagl ATND_XENLA : 39- 85: sswal IlLfYlvFYGflAGLFtltMwvMlqTLDdsvPkYrDrvssPGLmisP ksagl H 8: 71.6088 21( 21) Y-[ALV]-[AIV]-F-Y-[AGTV]-x(2)-[AST]-[AG]-[FILMV]-F-x(3)-[ILM]-x(2)-[FLM]-x(2)-T-[ILV]-[DS]-x(3)-P-x-[WY]-x-[DN]-x(4)-[IP]-G-[ALV]-x(3)-[LP] Occurences: 21(21) ATHB_CANFA : 44- 86: wisly YVAFYVvmTGIFalcIytLmcTLDpytPdYqDqlksPGVtlrP dvyge ATHB_PIG : 44- 86: wisly YVAFYVvmSGIFalcIyvLmrTIDpytPdYqDqlksPGVtlrP dvyge ATHB_RABIT : 44- 86: wisly YVAFYVvmTGLFalcIyvLmqTIDpytPdYqDqlksPGVtlrP dvyge ATHB_RAT : 44- 86: wisly YAAFYVvmTGLFalcIyvLmqTIDpytPdYqDqlksPGVtlrP dvyge ATNB_ARTSA : 50- 92: kitif YVIFYTllAGFFagmLmiFyqTLDfkiPkWqNkdslIGAnpgL gfrpm ATNB_BUFMA : 40- 82: killf YLVFYGclAGIFigtIqvLllTLSiyePkYqDrvapPGLtqvP ravka ATNB_CANFA : 39- 81: killf YVIFYGclAGIFigtIqvMllTISefkPtYqDrvapPGLtqiP qiqkt ATNB_CHICK : 40- 82: killf YVIFYGclAGIFigtIqvMllTVSefePkYqDrvapPGLtqvP qvqkt ATNB_HUMAN : 39- 81: killf YVIFYGclAGIFigtIqvMllTISefkPtYqDrvapPGLtqiP qiqkt ATNB_MOUSE : 39- 81: killf YVIFYGclAGIFigtIqvMllTISelkPtYqDrvapPGLtqiP qiqkt ATNB_PIG : 39- 81: killf YVIFYGclAGIFigtIqvMllTISefkPtYqDrvapPGLtqiP qsqkt ATNB_RAT : 39- 81: killf YVIFYGclAGIFigtIqvMllTISelkPtYqDrvapPGLtqiP qiqkt ATNB_SHEEP : 39- 81: killf YVIFYGclAGIFigtIqvMllTISefkPtYqDrvapPGLtqiP qiqkt ATNB_TORCA : 40- 82: kifvf YLIFYGclAGIFigtIqvMllTISdfePkYqDrvapPGLshsP yavkt ATNC_BUFMA : 44- 86: lillf YVVFYAflTAVFslsLwvMlqTIDeytPkYaDrlanPGLmirP kmdtt ATNC_CHICK : 43- 85: lillf YLVFYGflAALFtftMwvMlqTLSndiPkYrDrissPGLmisP kpdta ATNC_HUMAN : 44- 86: fillf YLVFYGfpTAMFtltMwvMlqTVSdhtPkYqDrlatPGLmirP ktenl ATNC_MOUSE : 44- 86: fillf YLVFYGflTAMFsltMwvMlqTVSdhtPkYqDrlatPGLmirP ktenl ATNC_RAT : 44- 86: fillf YLVFYGflTAMFtltMwvMlqTVSdhtPkYqDrlatPGLmirP ktenl ATND_BUFMA : 43- 85: lillf YLVFYGflAGLFtltMwvMlqTLDdsvPkYrDrvsfPGLmisP ksagl ATND_XENLA : 43- 85: lillf YLVFYGflAGLFtltMwvMlqTLDdsvPkYrDrvssPGLmisP ksagl I 9: 45.7871 21( 21) G-[FY]-x(2)-G-x-P-C-[FILV]-[FIL]-[AIV]-K-[ILM]-[NT]-[DR]-[FIV]-[GILV] Occurences: 21(21) ATHB_CANFA : 171- 187: tdpnf GFaeGkPCFIIKMNRIV nflps ATHB_PIG : 171- 187: pdptf GFaeGkPCFIIKMNRIV kflpg ATHB_RABIT : 171- 187: tdpsf GFkeGkPCFIIKMNRIV rflps ATHB_RAT : 171- 187: vdpsf GFeeGkPCFIIKMNRIV kflps ATNB_ARTSA : 175- 191: kennf GYelGkPCVLIKLTDFG wrpev ATNB_BUFMA : 169- 185: ndttf GFneGkPCLIVKLNRIV gfkpr ATNB_CANFA : 168- 184: ndety GYrdGkPCVLIKLNRVL gfkpk ATNB_CHICK : 169- 185: qdntf GYkdGkPCILVKLNRII gfkpk ATNB_HUMAN : 168- 184: ndety GYkeGkPCIIIKLNRVL gfkpk ATNB_MOUSE : 168- 184: nddsy GYreGkPCIIIKLNRVL gfkpk ATNB_PIG : 168- 184: ndety GYkdGkPCVIIKLNRVL gfkpk ATNB_RAT : 168- 184: ndesy GYkeGkPCIIIKLNRVL gfkpk ATNB_SHEEP : 168- 184: ndety GYkeGkPCVIIKLNRVL gfkpk ATNB_TORCA : 169- 185: ddpsy GYseGkPCIIAKLNRIL gfypk ATNC_BUFMA : 171- 187: sdtty GYqdGkPCVLIKMNRVI nflpv ATNC_CHICK : 164- 180: edktf GYskGtPCVLVKMNRII glkpe ATNC_HUMAN : 170- 186: dsthy GYstGqPCVFIKMNRVI nfyag ATNC_MOUSE : 170- 186: dpthy GYstGqPCVFIKMNRVI nfyag ATNC_RAT : 170- 186: dpthy GYstGqPCVFIKMNRVI nfyag ATND_BUFMA : 164- 180: gneyf GYndGsPCVLVKMNRII glkpd ATND_XENLA : 163- 179: edpmf GYgeGkPCVIVKINRII glkpe J 10: 41.6025 22( 21) G-x(1,3)-G-x-P-C-[FILV]-[FIL]-[AIV]-K-[ILM]-[NT]-[DR]-[FIV]-[GILV] Occurences: 22(21) ATHB_CANFA : 171- 187: tdpnf GfaeGkPCFIIKMNRIV nflps ATHB_PIG : 171- 187: pdptf GfaeGkPCFIIKMNRIV kflpg ATHB_RABIT : 171- 187: tdpsf GfkeGkPCFIIKMNRIV rflps ATHB_RAT : 171- 187: vdpsf GfeeGkPCFIIKMNRIV kflps ATNB_ARTSA : 175- 191: kennf GyelGkPCVLIKLTDFG wrpev ATNB_BUFMA : 169- 185: ndttf GfneGkPCLIVKLNRIV gfkpr ATNB_CANFA : 168- 184: ndety GyrdGkPCVLIKLNRVL gfkpk ATNB_CHICK : 169- 185: qdntf GykdGkPCILVKLNRII gfkpk ATNB_HUMAN : 168- 184: ndety GykeGkPCIIIKLNRVL gfkpk ATNB_MOUSE : 168- 184: nddsy GyreGkPCIIIKLNRVL gfkpk ATNB_PIG : 168- 184: ndety GykdGkPCVIIKLNRVL gfkpk ATNB_RAT : 168- 184: ndesy GykeGkPCIIIKLNRVL gfkpk ATNB_SHEEP : 168- 184: ndety GykeGkPCVIIKLNRVL gfkpk ATNB_TORCA : 169- 185: ddpsy GyseGkPCIIAKLNRIL gfypk ATNC_BUFMA : 171- 187: sdtty GyqdGkPCVLIKMNRVI nflpv ATNC_CHICK : 164- 180: edktf GyskGtPCVLVKMNRII glkpe ATNC_HUMAN : 170- 186: dsthy GystGqPCVFIKMNRVI nfyag ATNC_MOUSE : 170- 186: dpthy GystGqPCVFIKMNRVI nfyag ATNC_RAT : 170- 186: dpthy GystGqPCVFIKMNRVI nfyag ATND_BUFMA : 164- 180: gneyf GyndGsPCVLVKMNRII glkpd ATND_XENLA : 163- 179: edpmf GygeGkPCVIVKINRII glkpe ATND_XENLA : 165- 179: pmfgy Ge--GkPCVIVKINRII glkpe K 11: 40.6025 22( 21) G-x(1,3)-G-x(1,3)-P-C-[FILV]-[FIL]-[AIV]-K-[ILM]-[NT]-[DR]-[FIV]-[GILV] Occurences: 22(21) ATHB_CANFA : 171- 187: tdpnf GfaeGk--PCFIIKMNRIV nflps ATHB_PIG : 171- 187: pdptf GfaeGk--PCFIIKMNRIV kflpg ATHB_RABIT : 171- 187: tdpsf GfkeGk--PCFIIKMNRIV rflps ATHB_RAT : 171- 187: vdpsf GfeeGk--PCFIIKMNRIV kflps ATNB_ARTSA : 175- 191: kennf GyelGk--PCVLIKLTDFG wrpev ATNB_BUFMA : 169- 185: ndttf GfneGk--PCLIVKLNRIV gfkpr ATNB_CANFA : 168- 184: ndety GyrdGk--PCVLIKLNRVL gfkpk ATNB_CHICK : 169- 185: qdntf GykdGk--PCILVKLNRII gfkpk ATNB_HUMAN : 168- 184: ndety GykeGk--PCIIIKLNRVL gfkpk ATNB_MOUSE : 168- 184: nddsy GyreGk--PCIIIKLNRVL gfkpk ATNB_PIG : 168- 184: ndety GykdGk--PCVIIKLNRVL gfkpk ATNB_RAT : 168- 184: ndesy GykeGk--PCIIIKLNRVL gfkpk ATNB_SHEEP : 168- 184: ndety GykeGk--PCVIIKLNRVL gfkpk ATNB_TORCA : 169- 185: ddpsy GyseGk--PCIIAKLNRIL gfypk ATNC_BUFMA : 171- 187: sdtty GyqdGk--PCVLIKMNRVI nflpv ATNC_CHICK : 164- 180: edktf GyskGt--PCVLVKMNRII glkpe ATNC_HUMAN : 170- 186: dsthy GystGq--PCVFIKMNRVI nfyag ATNC_MOUSE : 170- 186: dpthy GystGq--PCVFIKMNRVI nfyag ATNC_RAT : 170- 186: dpthy GystGq--PCVFIKMNRVI nfyag ATND_BUFMA : 164- 180: gneyf GyndGs--PCVLVKMNRII glkpd ATND_XENLA : 163- 179: edpmf GygeGk--PCVIVKINRII glkpe ATND_XENLA : 163- 179: edpmf Gy--GegkPCVIVKINRII glkpe ATND_XENLA : 165- 179: pmfgy Ge--Gk--PCVIVKINRII glkpe L 12: 38.4325 21( 21) G-x-P-C-[FILV]-[FIL]-[AIV]-K-[ILM]-[NT]-[DR]-[FIV]-[GILV] Occurences: 21(21) ATHB_CANFA : 175- 187: fgfae GkPCFIIKMNRIV nflps ATHB_PIG : 175- 187: fgfae GkPCFIIKMNRIV kflpg ATHB_RABIT : 175- 187: fgfke GkPCFIIKMNRIV rflps ATHB_RAT : 175- 187: fgfee GkPCFIIKMNRIV kflps ATNB_ARTSA : 179- 191: fgyel GkPCVLIKLTDFG wrpev ATNB_BUFMA : 173- 185: fgfne GkPCLIVKLNRIV gfkpr ATNB_CANFA : 172- 184: ygyrd GkPCVLIKLNRVL gfkpk ATNB_CHICK : 173- 185: fgykd GkPCILVKLNRII gfkpk ATNB_HUMAN : 172- 184: ygyke GkPCIIIKLNRVL gfkpk ATNB_MOUSE : 172- 184: ygyre GkPCIIIKLNRVL gfkpk ATNB_PIG : 172- 184: ygykd GkPCVIIKLNRVL gfkpk ATNB_RAT : 172- 184: ygyke GkPCIIIKLNRVL gfkpk ATNB_SHEEP : 172- 184: ygyke GkPCVIIKLNRVL gfkpk ATNB_TORCA : 173- 185: ygyse GkPCIIAKLNRIL gfypk ATNC_BUFMA : 175- 187: ygyqd GkPCVLIKMNRVI nflpv ATNC_CHICK : 168- 180: fgysk GtPCVLVKMNRII glkpe ATNC_HUMAN : 174- 186: ygyst GqPCVFIKMNRVI nfyag ATNC_MOUSE : 174- 186: ygyst GqPCVFIKMNRVI nfyag ATNC_RAT : 174- 186: ygyst GqPCVFIKMNRVI nfyag ATND_BUFMA : 168- 180: fgynd GsPCVLVKMNRII glkpd ATND_XENLA : 167- 179: fgyge GkPCVIVKINRII glkpe M 13: 34.2624 21( 21) P-C-[FILV]-[FIL]-[AIV]-K-[ILM]-[NT]-[DR]-[FIV]-[GILV] Occurences: 21(21) ATHB_CANFA : 177- 187: faegk PCFIIKMNRIV nflps ATHB_PIG : 177- 187: faegk PCFIIKMNRIV kflpg ATHB_RABIT : 177- 187: fkegk PCFIIKMNRIV rflps ATHB_RAT : 177- 187: feegk PCFIIKMNRIV kflps ATNB_ARTSA : 181- 191: yelgk PCVLIKLTDFG wrpev ATNB_BUFMA : 175- 185: fnegk PCLIVKLNRIV gfkpr ATNB_CANFA : 174- 184: yrdgk PCVLIKLNRVL gfkpk ATNB_CHICK : 175- 185: ykdgk PCILVKLNRII gfkpk ATNB_HUMAN : 174- 184: ykegk PCIIIKLNRVL gfkpk ATNB_MOUSE : 174- 184: yregk PCIIIKLNRVL gfkpk ATNB_PIG : 174- 184: ykdgk PCVIIKLNRVL gfkpk ATNB_RAT : 174- 184: ykegk PCIIIKLNRVL gfkpk ATNB_SHEEP : 174- 184: ykegk PCVIIKLNRVL gfkpk ATNB_TORCA : 175- 185: ysegk PCIIAKLNRIL gfypk ATNC_BUFMA : 177- 187: yqdgk PCVLIKMNRVI nflpv ATNC_CHICK : 170- 180: yskgt PCVLVKMNRII glkpe ATNC_HUMAN : 176- 186: ystgq PCVFIKMNRVI nfyag ATNC_MOUSE : 176- 186: ystgq PCVFIKMNRVI nfyag ATNC_RAT : 176- 186: ystgq PCVFIKMNRVI nfyag ATND_BUFMA : 170- 180: yndgs PCVLVKMNRII glkpd ATND_XENLA : 169- 179: ygegk PCVIVKINRII glkpe N 14: 33.8281 22( 21) L-x(1,3)-T-x(5)-P-x(1,2)-Y-x-[DS]-[QRS]-[AILV]-x(2)-P-[EG]-x(4)-[DP] Occurences: 22(21) ATHB_CANFA : 62- 86: lciyt Lmc-TldpytPd-YqDQLksPGvtlrP dvyge ATHB_PIG : 62- 86: lciyv Lmr-TidpytPd-YqDQLksPGvtlrP dvyge ATHB_RABIT : 62- 86: lciyv Lmq-TidpytPd-YqDQLksPGvtlrP dvyge ATHB_RAT : 62- 86: lciyv Lmq-TidpytPd-YqDQLksPGvtlrP dvyge ATNB_ARTSA : 184- 210: gkpcv LiklTdfgwrPevYnSSAevPEdmpaD lksyi ATNB_BUFMA : 58- 82: gtiqv Lll-TlsiyePk-YqDRVapPGltqvP ravka ATNB_BUFMA : 59- 82: tiqvl Ll--TlsiyePk-YqDRVapPGltqvP ravka ATNB_CANFA : 58- 81: tiqvm Ll--TisefkPt-YqDRVapPGltqiP qiqkt ATNB_CHICK : 59- 82: tiqvm Ll--TvsefePk-YqDRVapPGltqvP qvqkt ATNB_HUMAN : 58- 81: tiqvm Ll--TisefkPt-YqDRVapPGltqiP qiqkt ATNB_MOUSE : 58- 81: tiqvm Ll--TiselkPt-YqDRVapPGltqiP qiqkt ATNB_PIG : 58- 81: tiqvm Ll--TisefkPt-YqDRVapPGltqiP qsqkt ATNB_RAT : 58- 81: tiqvm Ll--TiselkPt-YqDRVapPGltqiP qiqkt ATNB_SHEEP : 58- 81: tiqvm Ll--TisefkPt-YqDRVapPGltqiP qiqkt ATNB_TORCA : 59- 82: tiqvm Ll--TisdfePk-YqDRVapPGlshsP yavkt ATNC_BUFMA : 63- 86: slwvm Lq--TideytPk-YaDRLanPGlmirP kmdtt ATNC_CHICK : 62- 85: tmwvm Lq--TlsndiPk-YrDRIssPGlmisP kpdta ATNC_HUMAN : 63- 86: tmwvm Lq--TvsdhtPk-YqDRLatPGlmirP ktenl ATNC_MOUSE : 63- 86: tmwvm Lq--TvsdhtPk-YqDRLatPGlmirP ktenl ATNC_RAT : 63- 86: tmwvm Lq--TvsdhtPk-YqDRLatPGlmirP ktenl ATND_BUFMA : 62- 85: tmwvm Lq--TlddsvPk-YrDRVsfPGlmisP ksagl ATND_XENLA : 62- 85: tmwvm Lq--TlddsvPk-YrDRVssPGlmisP ksagl O 15: 19.4533 22( 21) G-x(5)-Y-x(0,1)-P-Y-x-[GN] Occurences: 22(21) ATHB_CANFA : 222- 233: yyppn GtfslrYfPYyG kkaqp ATHB_PIG : 222- 233: yfpan GtyslhYfPYyG kkaqp ATHB_RABIT : 223- 234: yyppn GtfslhYfPYyG kkaqp ATHB_RAT : 226- 237: yyppn GtfslhYfPYyG kkaqp ATNB_ARTSA : 254- 264: ytpfr GfpayyY-PYlN vpgyl ATNB_BUFMA : 236- 246: mggyp GfplnyY-PYyG rllqp ATNB_CANFA : 237- 247: lggyp GfplqyY-PYyG kllqp ATNB_CHICK : 238- 248: mggyp GfalqyY-PYyG rllqp ATNB_HUMAN : 237- 247: lgnsp GfplqyY-PYyG kllqp ATNB_MOUSE : 238- 248: mggyy GfplqyY-PYyG kllqp ATNB_PIG : 237- 247: lggyp GfplqyY-PYyG kllqp ATNB_RAT : 238- 248: mggfy GfplqyY-PYyG kllqp ATNB_SHEEP : 237- 247: lggyp GfplqyY-PYyG kllqp ATNB_TORCA : 238- 249: gmggv GgfplqYyPYyG krlqk ATNB_TORCA : 239- 249: mggvg GfplqyY-PYyG krlqk ATNC_BUFMA : 230- 241: nnqsl GaidlmYfPYyG nraqq ATNC_CHICK : 209- 220: yfpsg GlidlmYfPYyG ktlha ATNC_HUMAN : 221- 232: mfpan GnidlmYfPYyG kkfhv ATNC_MOUSE : 221- 232: mfpan GsidlmYfPYyG kkfhv ATNC_RAT : 221- 232: mfpan GnidlmYfPYyG kkfhv ATND_BUFMA : 208- 219: yypey GkidlmYyPYyG kkthv ATND_XENLA : 207- 218: yfpdn GkidlmYfPYyG kkthv P 16: 18.9678 21( 21) Y-[FY]-P-Y-x-[GN] Occurences: 21(21) ATHB_CANFA : 228- 233: tfslr YFPYyG kkaqp ATHB_PIG : 228- 233: tyslh YFPYyG kkaqp ATHB_RABIT : 229- 234: tfslh YFPYyG kkaqp ATHB_RAT : 232- 237: tfslh YFPYyG kkaqp ATNB_ARTSA : 259- 264: gfpay YYPYlN vpgyl ATNB_BUFMA : 241- 246: gfpln YYPYyG rllqp ATNB_CANFA : 242- 247: gfplq YYPYyG kllqp ATNB_CHICK : 243- 248: gfalq YYPYyG rllqp ATNB_HUMAN : 242- 247: gfplq YYPYyG kllqp ATNB_MOUSE : 243- 248: gfplq YYPYyG kllqp ATNB_PIG : 242- 247: gfplq YYPYyG kllqp ATNB_RAT : 243- 248: gfplq YYPYyG kllqp ATNB_SHEEP : 242- 247: gfplq YYPYyG kllqp ATNB_TORCA : 244- 249: gfplq YYPYyG krlqk ATNC_BUFMA : 236- 241: aidlm YFPYyG nraqq ATNC_CHICK : 215- 220: lidlm YFPYyG ktlha ATNC_HUMAN : 227- 232: nidlm YFPYyG kkfhv ATNC_MOUSE : 227- 232: sidlm YFPYyG kkfhv ATNC_RAT : 227- 232: nidlm YFPYyG kkfhv ATND_BUFMA : 214- 219: kidlm YYPYyG kkthv ATND_XENLA : 213- 218: kidlm YFPYyG kkthv Q 17: 15.6947 21( 21) Y-x-P-[FY]-x-G Occurences: 21(21) ATHB_CANFA : 228- 233: tfslr YfPYyG kkaqp ATHB_PIG : 228- 233: tyslh YfPYyG kkaqp ATHB_RABIT : 229- 234: tfslh YfPYyG kkaqp ATHB_RAT : 232- 237: tfslh YfPYyG kkaqp ATNB_ARTSA : 249- 254: igtit YtPFrG fpayy ATNB_BUFMA : 241- 246: gfpln YyPYyG rllqp ATNB_CANFA : 242- 247: gfplq YyPYyG kllqp ATNB_CHICK : 243- 248: gfalq YyPYyG rllqp ATNB_HUMAN : 242- 247: gfplq YyPYyG kllqp ATNB_MOUSE : 243- 248: gfplq YyPYyG kllqp ATNB_PIG : 242- 247: gfplq YyPYyG kllqp ATNB_RAT : 243- 248: gfplq YyPYyG kllqp ATNB_SHEEP : 242- 247: gfplq YyPYyG kllqp ATNB_TORCA : 244- 249: gfplq YyPYyG krlqk ATNC_BUFMA : 236- 241: aidlm YfPYyG nraqq ATNC_CHICK : 215- 220: lidlm YfPYyG ktlha ATNC_HUMAN : 227- 232: nidlm YfPYyG kkfhv ATNC_MOUSE : 227- 232: sidlm YfPYyG kkfhv ATNC_RAT : 227- 232: nidlm YfPYyG kkfhv ATND_BUFMA : 214- 219: kidlm YyPYyG kkthv ATND_XENLA : 213- 218: kidlm YfPYyG kkthv R 18: 15.1802 22( 21) G-x(3,4)-G-x-P-x(1,3)-I Occurences: 22(21) ATHB_CANFA : 171- 180: tdpnf Gfae-GkPcf-I ikmnr ATHB_CANFA : 171- 181: tdpnf Gfae-GkPcfiI kmnri ATHB_PIG : 171- 180: pdptf Gfae-GkPcf-I ikmnr ATHB_PIG : 171- 181: pdptf Gfae-GkPcfiI kmnri ATHB_RABIT : 171- 180: tdpsf Gfke-GkPcf-I ikmnr ATHB_RABIT : 171- 181: tdpsf Gfke-GkPcfiI kmnri ATHB_RAT : 171- 180: vdpsf Gfee-GkPcf-I ikmnr ATHB_RAT : 171- 181: vdpsf Gfee-GkPcfiI kmnri ATNB_ARTSA : 175- 185: kennf Gyel-GkPcvlI kltdf ATNB_BUFMA : 169- 178: ndttf Gfne-GkPcl-I vklnr ATNB_CANFA : 168- 178: ndety Gyrd-GkPcvlI klnrv ATNB_CHICK : 169- 177: qdntf Gykd-GkPc--I lvkln ATNB_HUMAN : 168- 176: ndety Gyke-GkPc--I iikln ATNB_HUMAN : 168- 177: ndety Gyke-GkPci-I iklnr ATNB_HUMAN : 168- 178: ndety Gyke-GkPciiI klnrv ATNB_MOUSE : 168- 176: nddsy Gyre-GkPc--I iikln ATNB_MOUSE : 168- 177: nddsy Gyre-GkPci-I iklnr ATNB_MOUSE : 168- 178: nddsy Gyre-GkPciiI klnrv ATNB_PIG : 168- 177: ndety Gykd-GkPcv-I iklnr ATNB_PIG : 168- 178: ndety Gykd-GkPcviI klnrv ATNB_RAT : 168- 176: ndesy Gyke-GkPc--I iikln ATNB_RAT : 168- 177: ndesy Gyke-GkPci-I iklnr ATNB_RAT : 168- 178: ndesy Gyke-GkPciiI klnrv ATNB_SHEEP : 168- 177: ndety Gyke-GkPcv-I iklnr ATNB_SHEEP : 168- 178: ndety Gyke-GkPcviI klnrv ATNB_TORCA : 169- 177: ddpsy Gyse-GkPc--I iakln ATNB_TORCA : 169- 178: ddpsy Gyse-GkPci-I aklnr ATNC_BUFMA : 171- 181: sdtty Gyqd-GkPcvlI kmnrv ATNC_CHICK : 181- 190: mnrii GlkpeGePy--I qctsk ATNC_HUMAN : 170- 180: dsthy Gyst-GqPcvfI kmnrv ATNC_MOUSE : 170- 180: dpthy Gyst-GqPcvfI kmnrv ATNC_RAT : 170- 180: dpthy Gyst-GqPcvfI kmnrv ATND_BUFMA : 181- 190: mnrii GlkpdGnPh--I nctsk ATND_XENLA : 163- 172: edpmf Gyge-GkPcv-I vkinr ATND_XENLA : 180- 189: inrii GlkpeGnPk--I nctsk S 19: 14.7460 21( 21) T-[ILPV]-x(4)-P-x-Y Occurences: 21(21) ATHB_CANFA : 65- 73: ytlmc TLdpytPdY qdqlk ATHB_PIG : 65- 73: yvlmr TIdpytPdY qdqlk ATHB_RABIT : 65- 73: yvlmq TIdpytPdY qdqlk ATHB_RAT : 65- 73: yvlmq TIdpytPdY qdqlk ATNB_ARTSA : 250- 258: gtity TPfrgfPaY yypyl ATNB_BUFMA : 61- 69: qvlll TLsiyePkY qdrva ATNB_CANFA : 60- 68: qvmll TIsefkPtY qdrva ATNB_CHICK : 61- 69: qvmll TVsefePkY qdrva ATNB_HUMAN : 60- 68: qvmll TIsefkPtY qdrva ATNB_MOUSE : 60- 68: qvmll TIselkPtY qdrva ATNB_PIG : 60- 68: qvmll TIsefkPtY qdrva ATNB_RAT : 60- 68: qvmll TIselkPtY qdrva ATNB_SHEEP : 60- 68: qvmll TIsefkPtY qdrva ATNB_TORCA : 61- 69: qvmll TIsdfePkY qdrva ATNC_BUFMA : 65- 73: wvmlq TIdeytPkY adrla ATNC_CHICK : 64- 72: wvmlq TLsndiPkY rdris ATNC_HUMAN : 65- 73: wvmlq TVsdhtPkY qdrla ATNC_MOUSE : 65- 73: wvmlq TVsdhtPkY qdrla ATNC_RAT : 65- 73: wvmlq TVsdhtPkY qdrla ATND_BUFMA : 64- 72: wvmlq TLddsvPkY rdrvs ATND_XENLA : 64- 72: wvmlq TLddsvPkY rdrvs T 20: 14.6802 28( 21) P-G-x(0,2)-L-x(1,3)-P Occurences: 28(21) ATHB_CANFA : 80- 86: dqlks PGvtLr--P dvyge ATHB_PIG : 80- 86: dqlks PGvtLr--P dvyge ATHB_RABIT : 80- 86: dqlks PGvtLr--P dvyge ATHB_RAT : 80- 86: dqlks PGvtLr--P dvyge ATNB_ARTSA : 90- 96: ligan PG--LgfrP mppea ATNB_ARTSA : 266- 271: pylnv PGy-Lt--P vvalq ATNB_BUFMA : 76- 82: drvap PG--LtqvP ravka ATNB_BUFMA : 235- 243: gmggy PGfpLnyyP yygrl ATNB_CANFA : 75- 81: drvap PG--LtqiP qiqkt ATNB_CANFA : 236- 244: glggy PGfpLqyyP yygkl ATNB_CHICK : 76- 82: drvap PG--LtqvP qvqkt ATNB_CHICK : 237- 245: gmggy PGfaLqyyP yygrl ATNB_HUMAN : 75- 81: drvap PG--LtqiP qiqkt ATNB_HUMAN : 236- 244: glgns PGfpLqyyP yygkl ATNB_MOUSE : 75- 81: drvap PG--LtqiP qiqkt ATNB_PIG : 75- 81: drvap PG--LtqiP qsqkt ATNB_PIG : 236- 244: glggy PGfpLqyyP yygkl ATNB_RAT : 75- 81: drvap PG--LtqiP qiqkt ATNB_SHEEP : 75- 81: drvap PG--LtqiP qiqkt ATNB_SHEEP : 236- 244: glggy PGfpLqyyP yygkl ATNB_TORCA : 76- 82: drvap PG--LshsP yavkt ATNC_BUFMA : 80- 86: drlan PG--LmirP kmdtt ATNC_CHICK : 79- 85: driss PG--LmisP kpdta ATNC_HUMAN : 80- 86: drlat PG--LmirP ktenl ATNC_MOUSE : 80- 86: drlat PG--LmirP ktenl ATNC_RAT : 80- 86: drlat PG--LmirP ktenl ATND_BUFMA : 79- 85: drvsf PG--LmisP ksagl ATND_XENLA : 79- 85: drvss PG--LmisP ksagl Number of patterns evaluated by Pratt:2494 Total running time: 4 seconds