------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 36 sequences from file AMINO_ACID_PERMEASE PATTERN CONSERVATION: CM: min Nr of Seqs to Match 36 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 43 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename AMINO_ACID_PERMEASE.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: ALP1_YEAST 574 ANSP_SALTY 497 AROP_ECOLI 456 CAN1_CANAL 571 CAN1_YEAST 590 CTR1_YEAST 563 CYCA_ECOLI 470 GABP_BACSU 469 GABP_ECOLI 466 GAP1_YEAST 602 HIP1_YEAST 603 HUTM_BACSU 475 INA1_TRIHA 573 ISP5_SCHPO 543 LYP1_YEAST 611 LYSP_ECOLI 488 PAP1_YEAST 566 PHEP_ECOLI 458 PROY_SALTY 292 PUT4_YEAST 627 PUTX_EMENI 570 ROCC_BACSU 470 ROCE_BACSU 467 TAT2_YEAST 592 UGA4_YEAST 571 VAL1_YEAST 619 YBR8_YEAST 609 YBY2_YEAST 596 YCC5_YEAST 633 YEEF_ECOLI 454 YEEF_KLEPN 197 YFF5_YEAST 558 YIFK_ECOLI 461 YIFK_SALTY 461 YKR4_YEAST 618 YPEV_LACDL 175 Pratt run started at Thu Feb 6 18:35:59 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 11.5102 96( 36) G-x(3,4)-G-x(2,3)-G 2: 11.5102 83( 36) I-x(0,2)-G-L 3: 11.5102 82( 36) G-x(2,3)-G-x(2,3)-L 4: 11.5102 62( 36) G-x(3)-G-x(1,3)-L 5: 11.0102 106( 36) L-x(1,2)-V-x(1,3)-G 6: 11.0102 111( 36) I-x(1,2)-L-x(0,2)-V 7: 11.0102 107( 36) I-x(0,1)-L-x(0,2)-V 8: 11.0102 105( 36) I-x(0,1)-L-x(1,3)-V 9: 11.0102 118( 36) I-x(0,2)-L-x(1,2)-V 10: 11.0102 115( 36) I-x(2,3)-L-x(0,2)-V 11: 11.0102 104( 36) A-x(0,1)-I-x(1,3)-L 12: 11.0102 103( 36) A-x(0,2)-I-x(2,3)-L 13: 11.0102 124( 36) I-x(2,3)-I-x(1,3)-L 14: 11.0102 121( 36) I-x(2,4)-I-x(2,3)-L 15: 11.0102 110( 36) I-x(3,4)-I-x(0,2)-L 16: 11.0102 118( 36) I-x(3,5)-I-x(0,1)-L 17: 11.0102 105( 36) A-x(0,2)-I-x(3,4)-I 18: 11.0102 82( 36) F-x(4,5)-I-x(2,4)-I 19: 11.0102 108( 36) L-x(2,4)-A-x(2,3)-G 20: 11.0102 114( 36) L-x(1,2)-L-x(0,2)-A Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 11.5102 96( 36) G-x(3,4)-G-x(2,3)-G B 2: 11.5102 83( 36) I-x(0,2)-G-L C 3: 11.5102 82( 36) G-x(2,3)-G-x(2,3)-L D 4: 11.5102 62( 36) G-x(3)-G-x(1,3)-L E 5: 11.0102 106( 36) L-x(1,2)-V-x(1,3)-G F 6: 11.0102 111( 36) I-x(1,2)-L-x(0,2)-V G 7: 11.0102 107( 36) I-x(0,1)-L-x(0,2)-V H 8: 11.0102 105( 36) I-x(0,1)-L-x(1,3)-V I 9: 11.0102 118( 36) I-x(0,2)-L-x(1,2)-V J 10: 11.0102 115( 36) I-x(2,3)-L-x(0,2)-V K 11: 11.0102 104( 36) A-x(0,1)-I-x(1,3)-L L 12: 11.0102 103( 36) A-x(0,2)-I-x(2,3)-L M 13: 11.0102 124( 36) I-x(2,3)-I-x(1,3)-L N 14: 11.0102 121( 36) I-x(2,4)-I-x(2,3)-L O 15: 11.0102 110( 36) I-x(3,4)-I-x(0,2)-L P 16: 11.0102 118( 36) I-x(3,5)-I-x(0,1)-L Q 17: 11.0102 105( 36) A-x(0,2)-I-x(3,4)-I R 18: 11.0102 82( 36) F-x(4,5)-I-x(2,4)-I S 19: 11.0102 108( 36) L-x(2,4)-A-x(2,3)-G T 20: 11.0102 114( 36) L-x(1,2)-L-x(0,2)-A Best patterns with alignements: fitness hits(seqs) Pattern A 1: 11.5102 96( 36) G-x(3,4)-G-x(2,3)-G Occurences: 96(36) ALP1_YEAST : 77- 86: kqrhi GmialGgtiG tglii ALP1_YEAST : 83- 92: mialg GtigtGliiG igppl ALP1_YEAST : 236- 243: vvcga Gqsd-Gpi-G frywr ALP1_YEAST : 283- 292: aftyq GtelvGitaG eaanp ANSP_SALTY : 42- 51: miaig GaigtGlflG agarl ANSP_SALTY : 195- 204: iflgt GqpleGnatG fhlit AROP_ECOLI : 27- 36: lialg GsigtGlflG sasvi AROP_ECOLI : 88- 96: aykyw Gsfa-GfasG wnywv CAN1_CANAL : 227- 235: fimvc GagktGpv-G frywr CAN1_YEAST : 94- 103: kqrhi GmialGgtiG tglfi CAN1_YEAST : 100- 109: mialg GtigtGlfiG lstpl CAN1_YEAST : 251- 259: fcmvc GagvtGpv-G frywr CAN1_YEAST : 299- 308: aftfq GtelvGitaG eaanp CTR1_YEAST : 453- 461: rniah GpfwlGkf-G ffsni CYCA_ECOLI : 35- 44: liaig GaigtGlfmG sgkti CYCA_ECOLI : 96- 104: asdll Gpwa-GyftG wtywf CYCA_ECOLI : 205- 213: lwndg GwfpkGls-G ffagf GABP_BACSU : 24- 33: misia GvigaGlfvG sgsvi GABP_BACSU : 85- 93: ahdai Gpwa-GftiG wlywf GABP_ECOLI : 87- 95: adkai Grwa-GytiG wlyww GAP1_YEAST : 102- 111: miaig GaigtGllvG sgtal GAP1_YEAST : 254- 263: iilnc GggptGgyiG gkywh GAP1_YEAST : 255- 263: ilncg GgptgGyi-G gkywh GAP1_YEAST : 255- 263: ilncg Ggpt-GgyiG gkywh GAP1_YEAST : 255- 264: ilncg GgptgGyigG kywhd GAP1_YEAST : 256- 263: lncgg Gptg-Gyi-G gkywh GAP1_YEAST : 256- 264: lncgg Gptg-GyigG kywhd GAP1_YEAST : 271- 279: ywhdp Gafa-GdtpG akfkg HIP1_YEAST : 253- 262: ivlsc GggphGgyiG gkywh HIP1_YEAST : 254- 262: vlscg GgphgGyi-G gkywh HIP1_YEAST : 254- 262: vlscg Ggph-GgyiG gkywh HIP1_YEAST : 254- 263: vlscg GgphgGyigG kywhd HIP1_YEAST : 255- 262: lscgg Gphg-Gyi-G gkywh HIP1_YEAST : 255- 263: lscgg Gphg-GyigG kywhd HIP1_YEAST : 270- 278: ywhdp Gafv-GhssG tqfkg HUTM_BACSU : 89- 97: attfi Gpst-GfmvG imywi HUTM_BACSU : 221- 230: sfafs GteliGvtaG esanp INA1_TRIHA : 77- 86: miaig GsigaGffvG sggal INA1_TRIHA : 82- 89: gsiga Gffv-Gsg-G alakg INA1_TRIHA : 89- 97: fvgsg GalakGgp-G slfvd INA1_TRIHA : 249- 257: ywydp GafknGfk-G fcsvf INA1_TRIHA : 340- 347: pfvlv Gkya-Glk-G fdhfm INA1_TRIHA : 468- 476: pfkaa Ggvy-GsylG lficv ISP5_SCHPO : 58- 67: migig GaigtGvwvG skntl LYP1_YEAST : 116- 125: kqrhi GmialGgtiG tglfv LYP1_YEAST : 122- 131: mialg GtigtGlfvG istpl LYP1_YEAST : 273- 281: liivc GgshqGpi-G frywr LYP1_YEAST : 274- 281: iivcg Gshq-Gpi-G frywr LYP1_YEAST : 321- 330: aftyq GtelvGitaG eaanp LYSP_ECOLI : 219- 228: gfsfq GteliGiaaG esedp PAP1_YEAST : 245- 253: vincg GagvdGyi-G gkywr PAP1_YEAST : 245- 254: vincg GagvdGyigG kywrd PHEP_ECOLI : 35- 44: lialg GaigtGlflG igpai PHEP_ECOLI : 96- 104: aykyw Gpfa-GflsG wnywv PHEP_ECOLI : 202- 210: lwryg GffatGwn-G lilsl PROY_SALTY : 105- 113: aqenl Gpla-GyitG wtycf PROY_SALTY : 190- 199: ivagi GiivwGignG gqptg PROY_SALTY : 195- 204: giivw GigngGqptG ihnlw PROY_SALTY : 213- 221: lwsng GffsnGwl-G mimsl PROY_SALTY : 235- 244: mfayg GieiiGitaG eakdp PUT4_YEAST : 122- 131: lialg GaigtGllvG tsstl PUTX_EMENI : 53- 62: llaig GcigtGlfvG tstvl PUTX_EMENI : 311- 318: ptlea Gves-Ggs-G agasp PUTX_EMENI : 311- 320: ptlea GvesgGsgaG aspfv ROCC_BACSU : 24- 33: mialg GvigtGlflG sgfti ROCC_BACSU : 86- 94: atkfl Gqst-GfmiG wlywf ROCC_BACSU : 218- 227: nfsfq GtelvGiaaG esesp ROCE_BACSU : 27- 36: mislg GvigtGfflG tgfti ROCE_BACSU : 220- 229: nfafq GteliGvaaG esedp TAT2_YEAST : 94- 103: miaig GsigtGlfvG sgkai TAT2_YEAST : 111- 119: kaiae Ggpl-GvviG waiag TAT2_YEAST : 124- 133: gwaia GsqiiGtihG lgeit TAT2_YEAST : 262- 270: ywhdp GclanGfp-G vlsvl UGA4_YEAST : 199- 207: fevts Gkly-GifaG avvvm VAL1_YEAST : 107- 115: islgt Gigt-GllvG ngqvl VAL1_YEAST : 117- 124: llvgn Gqvl-Gta-G paglv VAL1_YEAST : 150- 158: aagel GlcyaGlt-G nytry VAL1_YEAST : 274- 282: ywhnp GpfahGfk-G vctvf YBR8_YEAST : 260- 268: vincg GagndGyi-G atywh YBY2_YEAST : 276- 284: kyfpd Gndv-GkssG yfqgf YBY2_YEAST : 280- 288: dgndv Gkss-GyfqG flacl YCC5_YEAST : 133- 141: ialgt Gigt-GllvG ngtal YCC5_YEAST : 285- 293: iidvg GagndGfi-G gkywh YCC5_YEAST : 285- 294: iidvg GagndGfigG kywhd YCC5_YEAST : 512- 519: amkvq Grsl-Gel-G fksqt YEEF_ECOLI : 43- 51: lfdtf Givs-GltdG hvpta YEEF_ECOLI : 174- 183: iavil GmvvyGvfeG egagt YEEF_ECOLI : 179- 187: gmvvy Gvfe-GegaG tlast YEEF_KLEPN : 168- 175: ssmvl Gliw-Ggi-G lvyxa YFF5_YEAST : 65- 74: llalg GvigpGclvG agnal YFF5_YEAST : 233- 241: ywnsp GalshGfk-G iaivf YIFK_ECOLI : 24- 33: lialg GtigvGlfmG aastl YIFK_ECOLI : 170- 179: ivigl GviffGfgnG gqsig YIFK_ECOLI : 175- 184: gviff GfgngGqsiG fsnlt YIFK_ECOLI : 192- 201: nlteh GxffaGgwkG fltal YIFK_ECOLI : 215- 224: vasyq GveliGitaG eaknp YIFK_SALTY : 24- 33: lialg GtigvGlfmG aastl YIFK_SALTY : 170- 179: iiigl GviffGfgnG gqaig YIFK_SALTY : 175- 184: gviff GfgngGqaiG fgnlt YIFK_SALTY : 192- 201: nlteh GgffaGgweG fltal YIFK_SALTY : 193- 201: ltehg GffagGwe-G fltal YIFK_SALTY : 193- 201: ltehg Gffa-GgweG fltal YIFK_SALTY : 215- 224: vasyq GveliGitaG eaknp YKR4_YEAST : 59- 67: sllsr Gsiv-GlglG lmspv YPEV_LACDL : 30- 39: miaig GtigtGlflG agtti YPEV_LACDL : 91- 99: itryl Geaa-GrfaG wtywi B 2: 11.5102 83( 36) I-x(0,2)-G-L Occurences: 83(36) ALP1_YEAST : 85- 89: alggt IgtGL iigig ALP1_YEAST : 323- 325: lslff I--GL lvpyn ANSP_SALTY : 44- 48: aigga IgtGL flgag ANSP_SALTY : 264- 266: sviwr I--GL fyvgs AROP_ECOLI : 29- 33: alggs IgtGL flgsa CAN1_CANAL : 78- 82: aiggt IgtGL fistg CAN1_CANAL : 373- 377: ysgsr IlyGL aqagv CAN1_YEAST : 102- 106: alggt IgtGL figls CAN1_YEAST : 108- 110: gtglf I--GL stplt CAN1_YEAST : 339- 341: gsllf I--GL lvpyn CAN1_YEAST : 400- 404: yvgsr IlfGL sknkl CTR1_YEAST : 260- 263: ggiaf Iv-GL inpaw CTR1_YEAST : 410- 412: awitl I--GL lylas CYCA_ECOLI : 37- 41: aigga IgtGL fmgsg CYCA_ECOLI : 176- 180: aivsl IvvGL vmvam CYCA_ECOLI : 451- 455: tplwf IalGL gwlfi GABP_BACSU : 26- 30: siagv IgaGL fvgsg GABP_ECOLI : 432- 436: qqlev IstGL laigi GAP1_YEAST : 104- 108: aigga IgtGL lvgsg GAP1_YEAST : 338- 340: lsllm I--GL lvpyn GAP1_YEAST : 371- 374: ikthg Ik-GL psvvn HIP1_YEAST : 104- 108: avgga IgtGL yvntg HIP1_YEAST : 371- 374: iengg Ik-GL pslmn HUTM_BACSU : 29- 33: slggv IgtGL flstg HUTM_BACSU : 55- 58: ilayv Ig-GL mmylv HUTM_BACSU : 260- 264: igavf IlsGL iswkd HUTM_BACSU : 426- 428: csasc I--GL afdpn INA1_TRIHA : 305- 308: itify Il-GL ffvgl INA1_TRIHA : 429- 432: dwlla Is-GL aalft ISP5_SCHPO : 319- 322: lmdak Ir-GL phvln LYP1_YEAST : 124- 128: alggt IgtGL fvgis LYP1_YEAST : 361- 363: mslff I--GL lvpyn LYSP_ECOLI : 30- 34: aiggs IgtGL fvasg LYSP_ECOLI : 57- 59: lsyml I--GL mvyfl LYSP_ECOLI : 354- 357: yattv Ia-GL cflts PAP1_YEAST : 94- 98: slgtg IgtGL lvana PAP1_YEAST : 445- 448: twlaa Ia-GL selft PHEP_ECOLI : 37- 41: algga IgtGL flgig PHEP_ECOLI : 176- 180: aiigm IgfGL wllfs PROY_SALTY : 46- 50: algsa IgtGL fygsa PUT4_YEAST : 124- 128: algga IgtGL lvgts PUT4_YEAST : 265- 268: ikilc Iv-GL iilsf PUTX_EMENI : 55- 59: aiggc IgtGL fvgts PUTX_EMENI : 196- 199: lkila Ii-GL iilgv PUTX_EMENI : 197- 199: kilai I--GL iilgv PUTX_EMENI : 395- 397: latwt I--GL lsfln ROCC_BACSU : 26- 30: alggv IgtGL flgsg ROCC_BACSU : 433- 435: ipdqr I--GL ycgvp ROCE_BACSU : 415- 417: pvlpl I--GL tlntv TAT2_YEAST : 96- 100: aiggs IgtGL fvgsg TAT2_YEAST : 131- 134: qiigt Ih-GL geitv TAT2_YEAST : 437- 440: nwlma Ia-GL atciv UGA4_YEAST : 86- 89: giafs Im-GL lpsia UGA4_YEAST : 174- 178: agvcs IdyGL aeeia UGA4_YEAST : 429- 432: cvgsl Il-GL lclid VAL1_YEAST : 108- 112: slgtg IgtGL lvgng YBR8_YEAST : 109- 113: slgtg IgtGL lvana YBR8_YEAST : 460- 463: twlaa Ia-GL selft YBY2_YEAST : 507- 510: qpyta Ii-GL vscsa YBY2_YEAST : 508- 510: pytai I--GL vscsa YCC5_YEAST : 134- 138: algtg IgtGL lvgng YCC5_YEAST : 485- 488: twlla Is-GL sqlft YEEF_ECOLI : 44- 48: fdtfg IvsGL tdghv YEEF_ECOLI : 431- 433: liwaa I--GL iylac YEEF_KLEPN : 174- 176: liwgg I--GL vyxac YFF5_YEAST : 200- 203: lawlk Iv-GL vayyi YIFK_ECOLI : 26- 30: alggt IgvGL fmgaa YIFK_ECOLI : 50- 54: vllay IiaGL fvffi YIFK_ECOLI : 51- 54: llayi Ia-GL fvffi YIFK_ECOLI : 165- 169: tiivm IviGL gviff YIFK_ECOLI : 167- 169: ivmiv I--GL gviff YIFK_SALTY : 26- 30: alggt IgvGL fmgaa YIFK_SALTY : 50- 54: vllay IiaGL fvffi YIFK_SALTY : 51- 54: llayi Ia-GL fvffi YIFK_SALTY : 130- 134: wipal IavGL valan YIFK_SALTY : 165- 169: tiivm IiiGL gviff YIFK_SALTY : 166- 169: iivmi Ii-GL gviff YIFK_SALTY : 167- 169: ivmii I--GL gviff YKR4_YEAST : 61- 64: lsrgs Iv-GL glglm YKR4_YEAST : 81- 83: ctsma I--GL inggp YKR4_YEAST : 511- 514: fcilv It-GL yfkwg YPEV_LACDL : 32- 36: aiggt IgtGL flgag YPEV_LACDL : 57- 60: ifiya Im-GL ffffl C 3: 11.5102 82( 36) G-x(2,3)-G-x(2,3)-L Occurences: 82(36) ALP1_YEAST : 82- 89: gmial GgtiGtg-L iigig ALP1_YEAST : 83- 89: mialg Gti-Gtg-L iigig ANSP_SALTY : 41- 48: qmiai GgaiGtg-L flgag ANSP_SALTY : 42- 48: miaig Gai-Gtg-L flgag ANSP_SALTY : 200- 207: gqple GnatGfh-L itdng AROP_ECOLI : 4- 11: mme GqqhGeq-L krglk AROP_ECOLI : 26- 33: qlial GgsiGtg-L flgsa AROP_ECOLI : 27- 33: lialg Gsi-Gtg-L flgsa CAN1_CANAL : 75- 82: smiai GgtiGtg-L fistg CAN1_CANAL : 76- 82: miaig Gti-Gtg-L fistg CAN1_CANAL : 242- 250: rywrn GyawGdgiL vnnng CAN1_YEAST : 99- 106: gmial GgtiGtg-L figls CAN1_YEAST : 100- 106: mialg Gti-Gtg-L figls CTR1_YEAST : 340- 348: ynqal GnksGaifL gclil CYCA_ECOLI : 34- 41: qliai GgaiGtg-L fmgsg CYCA_ECOLI : 35- 41: liaig Gai-Gtg-L fmgsg GABP_BACSU : 24- 30: misia Gvi-Gag-L fvgsg GABP_BACSU : 433- 440: elllt GvitGiv-L isylv GABP_ECOLI : 26- 32: mlsia Gvi-Gas-L fvgss GAP1_YEAST : 101- 108: qmiai GgaiGtg-L lvgsg GAP1_YEAST : 101- 109: qmiai GgaiGtglL vgsgt GAP1_YEAST : 102- 108: miaig Gai-Gtg-L lvgsg GAP1_YEAST : 102- 109: miaig Gai-GtglL vgsgt HIP1_YEAST : 101- 108: ltlav GgaiGtg-L yvntg HIP1_YEAST : 102- 108: tlavg Gai-Gtg-L yvntg HIP1_YEAST : 369- 377: iaien GgikGlpsL mnaii HIP1_YEAST : 370- 377: aieng Gik-GlpsL mnaii HIP1_YEAST : 498- 506: qtgvk GswyGfivL flvli HUTM_BACSU : 26- 33: fmisl GgviGtg-L flstg HUTM_BACSU : 27- 33: mislg Gvi-Gtg-L flstg HUTM_BACSU : 45- 51: tlhqa Gpg-Gti-L ayvig INA1_TRIHA : 367- 375: sigvs GvygGsrtL talaq INA1_TRIHA : 468- 475: pfkaa GgvyGsy-L glfic INA1_TRIHA : 469- 475: fkaag Gvy-Gsy-L glfic ISP5_SCHPO : 124- 132: ihpsw GftlGwnyL asfla LYP1_YEAST : 121- 128: gmial GgtiGtg-L fvgis LYP1_YEAST : 122- 128: mialg Gti-Gtg-L fvgis LYSP_ECOLI : 27- 34: tmiai GgsiGtg-L fvasg LYSP_ECOLI : 28- 34: miaig Gsi-Gtg-L fvasg LYSP_ECOLI : 46- 52: tisqa Gpg-Gal-L symli PAP1_YEAST : 91- 98: vmmsl GtgiGtg-L lvana PAP1_YEAST : 91- 99: vmmsl GtgiGtglL vanak PHEP_ECOLI : 34- 41: qlial GgaiGtg-L flgig PHEP_ECOLI : 35- 41: lialg Gai-Gtg-L flgig PHEP_ECOLI : 174- 180: vlaii Gmi-Gfg-L wllfs PHEP_ECOLI : 207- 213: gffat Gwn-Gli-L slavi PROY_SALTY : 43- 50: rfmal GsaiGtg-L fygsa PROY_SALTY : 200- 208: gigng GqptGihnL wsngg PUT4_YEAST : 121- 128: qlial GgaiGtg-L lvgts PUT4_YEAST : 121- 129: qlial GgaiGtglL vgtss PUT4_YEAST : 122- 128: lialg Gai-Gtg-L lvgts PUT4_YEAST : 122- 129: lialg Gai-GtglL vgtss PUTX_EMENI : 52- 59: qllai GgciGtg-L fvgts PUTX_EMENI : 53- 59: llaig Gci-Gtg-L fvgts PUTX_EMENI : 235- 241: pylvp Gdt-Gkf-L gfwta PUTX_EMENI : 355- 363: hpvth GcyaGsekL yslag ROCC_BACSU : 23- 30: fmial GgviGtg-L flgsg ROCC_BACSU : 24- 30: mialg Gvi-Gtg-L flgsg ROCC_BACSU : 344- 350: llitl Gis-Gcs-L ltsvm ROCC_BACSU : 344- 351: llitl Gis-GcslL tsvma ROCE_BACSU : 45- 51: tinqa Gpl-Gav-L sylvg TAT2_YEAST : 93- 100: imiai GgsiGtg-L fvgsg TAT2_YEAST : 94- 100: miaig Gsi-Gtg-L fvgsg TAT2_YEAST : 542- 550: ykcqt GkwwGvkaL kdidl UGA4_YEAST : 100- 108: svmgg GlggGpatL vwgwf VAL1_YEAST : 105- 112: vmisl GtgiGtg-L lvgng VAL1_YEAST : 105- 113: vmisl GtgiGtglL vgngq VAL1_YEAST : 121- 128: ngqvl Gta-GpagL vlgyg VAL1_YEAST : 124- 130: vlgta Gpa-Glv-L gygia VAL1_YEAST : 494- 500: ykaqt Gyw-Gsw-L avlia YBR8_YEAST : 106- 113: vmmsl GtgiGtg-L lvana YBR8_YEAST : 106- 114: vmmsl GtgiGtglL vanak YBY2_YEAST : 100- 106: liais Gvi-Gta-L fvaig YCC5_YEAST : 131- 138: lmial GtgiGtg-L lvgng YCC5_YEAST : 131- 139: lmial GtgiGtglL vgngt YEEF_ECOLI : 97- 105: isptv GfmvGwssL ldylf YEEF_ECOLI : 218- 225: cfsft Gfd-GisnL seetk YEEF_KLEPN : 168- 176: ssmvl GliwGgigL vyxac YFF5_YEAST : 64- 72: sllal GgviGpgcL vgagn YFF5_YEAST : 65- 72: llalg Gvi-GpgcL vgagn YFF5_YEAST : 325- 332: aisra GwagGah-L vnafi YFF5_YEAST : 325- 332: aisra Gwa-GgahL vnafi YIFK_ECOLI : 23- 30: elial GgtiGvg-L fmgaa YIFK_ECOLI : 24- 30: lialg Gti-Gvg-L fmgaa YIFK_ECOLI : 180- 188: gfgng GqsiGfsnL tehgx YIFK_SALTY : 23- 30: elial GgtiGvg-L fmgaa YIFK_SALTY : 24- 30: lialg Gti-Gvg-L fmgaa YIFK_SALTY : 180- 188: gfgng GqaiGfgnL tehgg YKR4_YEAST : 59- 66: sllsr GsivGlg-L glmsp YKR4_YEAST : 82- 89: tsmai GlinGgp-L timlg YPEV_LACDL : 29- 36: qmiai GgtiGtg-L flgag YPEV_LACDL : 30- 36: miaig Gti-Gtg-L flgag D 4: 11.5102 62( 36) G-x(3)-G-x(1,3)-L Occurences: 62(36) ALP1_YEAST : 82- 89: gmial GgtiGtg-L iigig ANSP_SALTY : 41- 48: qmiai GgaiGtg-L flgag ANSP_SALTY : 200- 207: gqple GnatGfh-L itdng AROP_ECOLI : 4- 11: mme GqqhGeq-L krglk AROP_ECOLI : 26- 33: qlial GgsiGtg-L flgsa CAN1_CANAL : 75- 82: smiai GgtiGtg-L fistg CAN1_CANAL : 142- 148: vsksc GaanGw--L ywfsw CAN1_CANAL : 242- 250: rywrn GyawGdgiL vnnng CAN1_YEAST : 99- 106: gmial GgtiGtg-L figls CTR1_YEAST : 108- 114: isici GtslGe--L ssayp CTR1_YEAST : 340- 348: ynqal GnksGaifL gclil CYCA_ECOLI : 34- 41: qliai GgaiGtg-L fmgsg GABP_BACSU : 89- 95: igpwa GftiGw--L ywffw GABP_BACSU : 433- 440: elllt GvitGiv-L isylv GABP_ECOLI : 91- 97: igrwa GytiGw--L ywwfw GAP1_YEAST : 101- 108: qmiai GgaiGtg-L lvgsg GAP1_YEAST : 101- 109: qmiai GgaiGtglL vgsgt HIP1_YEAST : 101- 108: ltlav GgaiGtg-L yvntg HIP1_YEAST : 369- 377: iaien GgikGlpsL mnaii HIP1_YEAST : 498- 506: qtgvk GswyGfivL flvli HUTM_BACSU : 26- 33: fmisl GgviGtg-L flstg INA1_TRIHA : 367- 375: sigvs GvygGsrtL talaq INA1_TRIHA : 468- 475: pfkaa GgvyGsy-L glfic ISP5_SCHPO : 124- 132: ihpsw GftlGwnyL asfla LYP1_YEAST : 121- 128: gmial GgtiGtg-L fvgis LYSP_ECOLI : 27- 34: tmiai GgsiGtg-L fvasg PAP1_YEAST : 91- 98: vmmsl GtgiGtg-L lvana PAP1_YEAST : 91- 99: vmmsl GtgiGtglL vanak PAP1_YEAST : 93- 99: mslgt GigtGl--L vanak PHEP_ECOLI : 34- 41: qlial GgaiGtg-L flgig PHEP_ECOLI : 96- 102: aykyw GpfaGf--L sgwny PROY_SALTY : 43- 50: rfmal GsaiGtg-L fygsa PROY_SALTY : 200- 208: gigng GqptGihnL wsngg PUT4_YEAST : 121- 128: qlial GgaiGtg-L lvgts PUT4_YEAST : 121- 129: qlial GgaiGtglL vgtss PUTX_EMENI : 52- 59: qllai GgciGtg-L fvgts PUTX_EMENI : 355- 363: hpvth GcyaGsekL yslag ROCC_BACSU : 23- 30: fmial GgviGtg-L flgsg ROCC_BACSU : 90- 96: lgqst GfmiGw--L ywfsw ROCE_BACSU : 93- 99: ispaf GfafGw--L ywlgw TAT2_YEAST : 93- 100: imiai GgsiGtg-L fvgsg TAT2_YEAST : 542- 550: ykcqt GkwwGvkaL kdidl UGA4_YEAST : 100- 108: svmgg GlggGpatL vwgwf VAL1_YEAST : 105- 112: vmisl GtgiGtg-L lvgng VAL1_YEAST : 105- 113: vmisl GtgiGtglL vgngq VAL1_YEAST : 107- 113: islgt GigtGl--L vgngq YBR8_YEAST : 106- 113: vmmsl GtgiGtg-L lvana YBR8_YEAST : 106- 114: vmmsl GtgiGtglL vanak YBR8_YEAST : 108- 114: mslgt GigtGl--L vanak YBY2_YEAST : 284- 290: vgkss GyfqGf--L acliq YCC5_YEAST : 131- 138: lmial GtgiGtg-L lvgng YCC5_YEAST : 131- 139: lmial GtgiGtglL vgngt YCC5_YEAST : 133- 139: ialgt GigtGl--L vgngt YCC5_YEAST : 512- 518: amkvq GrslGe--L gfksq YEEF_ECOLI : 97- 105: isptv GfmvGwssL ldylf YEEF_ECOLI : 183- 189: ygvfe GegaGt--L astrp YEEF_KLEPN : 168- 176: ssmvl GliwGgigL vyxac YFF5_YEAST : 64- 72: sllal GgviGpgcL vgagn YFF5_YEAST : 325- 332: aisra GwagGah-L vnafi YIFK_ECOLI : 23- 30: elial GgtiGvg-L fmgaa YIFK_ECOLI : 180- 188: gfgng GqsiGfsnL tehgx YIFK_ECOLI : 197- 203: gxffa GgwkGf--L talci YIFK_SALTY : 23- 30: elial GgtiGvg-L fmgaa YIFK_SALTY : 180- 188: gfgng GqaiGfgnL tehgg YIFK_SALTY : 197- 203: ggffa GgweGf--L talci YKR4_YEAST : 59- 66: sllsr GsivGlg-L glmsp YKR4_YEAST : 82- 89: tsmai GlinGgp-L timlg YPEV_LACDL : 29- 36: qmiai GgtiGtg-L flgag E 5: 11.0102 106( 36) L-x(1,2)-V-x(1,3)-G Occurences: 106(36) ALP1_YEAST : 168- 172: tfale Ls-Vl--G kviqy ALP1_YEAST : 398- 404: laprf LsnVtr-G gvpyf ALP1_YEAST : 398- 405: laprf LsnVtrgG vpyfs ALP1_YEAST : 423- 428: gflaf Le-Vsa-G sgkaf ALP1_YEAST : 492- 498: sffia Li-VliqG ftafa ANSP_SALTY : 298- 304: tffsk Lg-VpyiG simni ANSP_SALTY : 360- 366: gilat Lv-VyvvG vflny ANSP_SALTY : 460- 464: pliai Ll-Va--G wfgvr AROP_ECOLI : 143- 150: inain LtnVkvfG emefw AROP_ECOLI : 324- 331: napka LasVdkrG vpvnt AROP_ECOLI : 436- 440: lipvw Li-Vl--G igylf AROP_ECOLI : 436- 442: lipvw Li-VlgiG ylfke CAN1_CANAL : 161- 165: tfgle Ls-Vv--G qviqf CAN1_CANAL : 277- 283: fqgse LvaVta-G easpr CAN1_CANAL : 508- 515: yisvi LfvVlwvG fhfff CAN1_YEAST : 185- 189: tfale Ls-Vv--G qviqf CAN1_YEAST : 217- 224: itimn LfpVkyyG efefw CTR1_YEAST : 64- 69: slwsi Lg-Vgf-G ltnsw CYCA_ECOLI : 151- 158: lltln LatVkmfG emefw CYCA_ECOLI : 175- 179: vaivs Li-Vv--G lvmva CYCA_ECOLI : 286- 291: spfve Lf-Vlv-G lpaaa GABP_BACSU : 30- 35: vigag Lf-Vgs-G svihs GABP_BACSU : 358- 365: pdtvf LflVnssG aiall GABP_BACSU : 431- 437: rdell LtgVit-G ivlis GABP_ECOLI : 142- 149: ltgsn LlsVknyG efefw GABP_ECOLI : 143- 149: tgsnl Ls-VknyG efefw GABP_ECOLI : 169- 176: lafif LgaVaisG fypya GABP_ECOLI : 429- 435: rpaqq Le-VistG llaig GAP1_YEAST : 108- 113: aigtg Ll-Vgs-G talrt GAP1_YEAST : 383- 390: vnvvi LiaVlsvG nsaiy GAP1_YEAST : 539- 546: ylsfp LvmVmyiG hkiyk HIP1_YEAST : 98- 102: rhllt La-Vg--G aigtg HIP1_YEAST : 108- 113: aigtg Ly-Vnt-G aalst HIP1_YEAST : 220- 226: alanm Ld-VksfG etefv HIP1_YEAST : 246- 253: igfti LgiVlscG ggphg HIP1_YEAST : 414- 421: nlpkf LnrVdkrG rpmna HIP1_YEAST : 541- 547: lsfpi Li-VcyvG hklyt HUTM_BACSU : 25- 30: lfmis LggVi--G tglfl HUTM_BACSU : 25- 32: lfmis LggVigtG lflst HUTM_BACSU : 51- 56: pggti LayVi--G glmmy HUTM_BACSU : 51- 57: pggti LayVig-G lmmyl HUTM_BACSU : 224- 230: fsgte LigVta-G esanp HUTM_BACSU : 301- 308: vilta LlsVansG lyast HUTM_BACSU : 302- 308: iltal Ls-VansG lyast INA1_TRIHA : 162- 166: vlple Lt-Vc--G itisy INA1_TRIHA : 357- 364: mnlvi LasVlsiG vsgvy ISP5_SCHPO : 92- 99: vgsmv LmtVyslG elava ISP5_SCHPO : 169- 176: vfial LcfVnmfG vrgyg LYP1_YEAST : 268- 273: yliya LiiVc--G gshqg LYP1_YEAST : 268- 274: yliya LiiVcg-G shqgp LYP1_YEAST : 557- 564: yisli LlaVmfiG cqiyy LYP1_YEAST : 558- 564: islil La-VmfiG cqiyy LYSP_ECOLI : 34- 39: sigtg Lf-Vas-G atisq LYSP_ECOLI : 304- 311: mnavi LtaVlsaG nsgmy PAP1_YEAST : 229- 233: nscki Lm-Va--G fiils PAP1_YEAST : 237- 244: agfii LsvVincG gagvd PAP1_YEAST : 422- 427: lvvcs LvgVv--G fvacs PHEP_ECOLI : 151- 158: inavn LvnVrlyG etefw PHEP_ECOLI : 305- 311: ilvas Ls-VynsG vysns PHEP_ECOLI : 322- 326: rmlfg Ls-Vq--G napkf PHEP_ECOLI : 332- 339: napkf LtrVsrrG vpins PROY_SALTY : 160- 167: icain LmsVkvfG elefw PUT4_YEAST : 533- 537: tvwfs Li-Vi--G iitit PUTX_EMENI : 202- 209: iglii LgvVlffG ggpnh ROCC_BACSU : 22- 27: lfmia LggVi--G tglfl ROCC_BACSU : 22- 29: lfmia LggVigtG lflgs ROCC_BACSU : 164- 169: vaaii LfiVi--G gaavf ROCC_BACSU : 164- 170: vaaii LfiVig-G aavfg ROCC_BACSU : 299- 305: iltai Ls-VansG lyaas ROCE_BACSU : 25- 30: lfmis LggVi--G tgffl ROCE_BACSU : 25- 32: lfmis LggVigtG fflgt ROCE_BACSU : 223- 229: fqgte LigVaa-G esedp ROCE_BACSU : 300- 307: vilia LlsVansG lyast ROCE_BACSU : 301- 307: ilial Ls-VansG lyast TAT2_YEAST : 100- 105: sigtg Lf-Vgs-G kaiae TAT2_YEAST : 114- 119: aeggp LgvVi--G waiag TAT2_YEAST : 114- 119: aeggp Lg-Vvi-G waiag TAT2_YEAST : 211- 216: ivsin LfgVr--G fgeae TAT2_YEAST : 211- 218: ivsin LfgVrgfG eaefa TAT2_YEAST : 238- 245: cgfii LcvVlicG ggpdh TAT2_YEAST : 365- 372: vnavi LisVlsvG nscif TAT2_YEAST : 470- 477: kslde LefVsavG iwgsa UGA4_YEAST : 77- 81: rqfst Lq-Vf--G iafsi UGA4_YEAST : 447- 451: dalfs La-Va--G nnlaw VAL1_YEAST : 112- 117: gigtg Ll-Vgn-G qvlgt VAL1_YEAST : 242- 246: nscki Lm-Vi--G fvila VAL1_YEAST : 413- 420: vlpkc LayVdrnG rpllc YBR8_YEAST : 252- 259: agfii LsiVincG gagnd YBR8_YEAST : 419- 426: yapkf LdyVdreG rplra YBY2_YEAST : 106- 111: vigta Lf-Vai-G kalyr YCC5_YEAST : 138- 143: gigtg Ll-Vgn-G talvh YEEF_ECOLI : 22- 29: rktlt LvpVvmmG laymq YEEF_ECOLI : 168- 174: vlqvv LiaVil-G mvvyg YEEF_ECOLI : 173- 179: liavi LgmVvy-G vfege YEEF_ECOLI : 280- 284: qpeim Ly-Va--G kafqv YEEF_ECOLI : 313- 318: agvar LmyVm--G rdgvf YEEF_KLEPN : 23- 27: qpeim Ly-Va--G ktfqw YEEF_KLEPN : 56- 61: agvsr LmyVm--G rdgvf YEEF_KLEPN : 145- 149: fnyli Lp-Vc--G altvg YFF5_YEAST : 63- 68: islla LggVi--G pgclv YFF5_YEAST : 63- 70: islla LggVigpG clvga YFF5_YEAST : 130- 135: fhsda LpaVc--G yayvv YFF5_YEAST : 182- 189: feifq LvgVglfG eteyw YFF5_YEAST : 285- 290: tlwri Lv-Vyi-G iavfy YFF5_YEAST : 393- 399: lglis LmnVsv-G aanay YIFK_ECOLI : 140- 147: valan LaaVrlyG eiefw YIFK_ECOLI : 169- 175: mivig Lg-ViffG fgngg YIFK_ECOLI : 414- 420: vtmaf LicVli-G myfne YIFK_SALTY : 69- 74: gemlf LepVt--G sfavy YIFK_SALTY : 140- 147: valan LaaVrlyG eiefw YIFK_SALTY : 169- 175: miiig Lg-ViffG fgngg YIFK_SALTY : 414- 420: ltmaf LvcVli-G myfne YKR4_YEAST : 190- 196: vivfy Lv-VtvvG lvnlk YKR4_YEAST : 227- 234: ifidi LllVfhkG kfrsl YKR4_YEAST : 228- 234: fidil Ll-VfhkG kfrsl YPEV_LACDL : 132- 139: glpaw LieVsvlG lltll YPEV_LACDL : 170- 174: iaiis Lv-Vt--G i F 6: 11.0102 111( 36) I-x(1,2)-L-x(0,2)-V Occurences: 111(36) ALP1_YEAST : 323- 327: lslff IglL--V pyndp ALP1_YEAST : 323- 327: lslff Ig-Ll-V pyndp ALP1_YEAST : 490- 494: yasff Ia-Li-V liqgf ALP1_YEAST : 552- 556: sdhrq IeeL--V wiepe ANSP_SALTY : 176- 182: fwfal IkvLaiV iflvv ANSP_SALTY : 183- 186: vlaiv If-L--V vgtif ANSP_SALTY : 183- 187: vlaiv If-Lv-V gtifl ANSP_SALTY : 236- 239: fafas Ie-L--V gtaag ANSP_SALTY : 264- 269: sviwr Ig-LfyV gsvvl ANSP_SALTY : 457- 462: aslpl IaiLl-V agwfg ANSP_SALTY : 459- 462: lplia Il-L--V agwfg AROP_ECOLI : 141- 146: vvina In-LtnV kvfge AROP_ECOLI : 250- 255: ilify IgsLa-V llslm CAN1_CANAL : 100- 105: pvmsl IsfLf-V tticf CAN1_YEAST : 214- 220: wviit ImnLfpV kyyge CAN1_YEAST : 339- 343: gsllf IglL--V pyndp CAN1_YEAST : 339- 343: gsllf Ig-Ll-V pyndp CTR1_YEAST : 316- 322: amffs IqdLdaV lsstt CYCA_ECOLI : 172- 177: ikiva IvsLi-V vglvm CYCA_ECOLI : 172- 178: ikiva IvsLivV glvmv CYCA_ECOLI : 228- 231: fafvg Ie-L--V gttaa CYCA_ECOLI : 353- 359: ltfsc IclLggV vmlyv GABP_BACSU : 162- 167: kvvti IafLi-V gfafi GABP_BACSU : 289- 294: qimnf Iv-LtaV lscln GABP_BACSU : 367- 371: nssga IalL--V ylvia GABP_BACSU : 367- 371: nssga Ia-Ll-V ylvia GABP_BACSU : 441- 445: tgivl IsyL--V frkrk GABP_ECOLI : 167- 172: ailaf If-LgaV aisgf GABP_ECOLI : 293- 297: imdcv Il-Ls-V tscln GABP_ECOLI : 370- 374: dssga IalL--V ylvia GABP_ECOLI : 370- 374: dssga Ia-Ll-V ylvia GAP1_YEAST : 338- 342: lsllm IglL--V pyndk GAP1_YEAST : 338- 342: lsllm Ig-Ll-V pyndk GAP1_YEAST : 371- 377: ikthg IkgLpsV vnvvi GAP1_YEAST : 384- 389: nvvil IavLs-V gnsai HIP1_YEAST : 337- 341: tiltl IgcL--V psndp HIP1_YEAST : 381- 386: slmna Ii-LiaV vsvan HIP1_YEAST : 504- 509: swygf Iv-LflV liasf HUTM_BACSU : 23- 28: rhlfm Is-LggV igtgl INA1_TRIHA : 305- 311: itify IlgLffV gllin ISP5_SCHPO : 166- 172: witvf IalLcfV nmfgv ISP5_SCHPO : 282- 287: vslfy IlaLf-V vslli ISP5_SCHPO : 282- 288: vslfy IlaLfvV sllis ISP5_SCHPO : 319- 325: lmdak IrgLphV lnavi ISP5_SCHPO : 453- 457: cygaf IiiL--V fitef ISP5_SCHPO : 454- 457: ygafi Ii-L--V fitef LYP1_YEAST : 265- 271: imgyl IyaLiiV cggsh LYP1_YEAST : 361- 365: mslff IglL--V pynds LYP1_YEAST : 361- 365: mslff Ig-Ll-V pynds LYP1_YEAST : 556- 560: syisl Il-La-V mfigc LYSP_ECOLI : 57- 61: lsyml Ig-Lm-V yflmt LYSP_ECOLI : 248- 253: qvfwr Il-LfyV faili PAP1_YEAST : 168- 173: twlfc IqwLt-V lplel PAP1_YEAST : 235- 239: mvagf Ii-Ls-V vincg PAP1_YEAST : 235- 240: mvagf Ii-LsvV incgg PAP1_YEAST : 289- 293: fsfgg Ie-Lf-V lsine PHEP_ECOLI : 212- 217: gwngl IlsLa-V imfsf PHEP_ECOLI : 258- 262: illfy IgsL--V vllal PHEP_ECOLI : 258- 263: illfy IgsLv-V llaly PHEP_ECOLI : 351- 355: mlsga ItsL--V vliny PHEP_ECOLI : 351- 356: mlsga ItsLv-V linyl PHEP_ECOLI : 439- 443: mrlsa Il-Lp-V wivfl PROY_SALTY : 146- 151: avphw IwvLs-V vliic PROY_SALTY : 146- 152: avphw IwvLsvV liica PROY_SALTY : 158- 163: liica In-LmsV kvfge PROY_SALTY : 223- 229: gwlgm ImsLqmV mfayg PUT4_YEAST : 234- 238: gvwit If-Lc-V vviln PUT4_YEAST : 234- 239: gvwit If-LcvV vilnf PUT4_YEAST : 260- 266: fwfas IkiLciV gliil PUT4_YEAST : 567- 570: yitlp If-L--V lwfgh PUTX_EMENI : 179- 182: glwia Iv-L--V esefw PUTX_EMENI : 200- 204: aiigl Ii-Lg-V vlffg PUTX_EMENI : 200- 205: aiigl Ii-LgvV lffgg PUTX_EMENI : 328- 332: pfvva IktL--V legst PUTX_EMENI : 431- 435: wvlig IayL--V cfpps ROCC_BACSU : 20- 25: rhlfm Ia-LggV igtgl ROCC_BACSU : 127- 131: svpiw IwcL--V fgivi ROCC_BACSU : 139- 144: ivifl InaLs-V rsfae ROCC_BACSU : 162- 167: ikvaa Ii-LfiV iggaa ROCE_BACSU : 23- 28: rhlfm Is-LggV igtgf ROCE_BACSU : 130- 134: hidvw IwcL--V faalm ROCE_BACSU : 298- 303: nfvil IalLs-V ansgl ROCE_BACSU : 298- 303: nfvil Ia-LlsV ansgl TAT2_YEAST : 209- 214: avivs In-LfgV rgfge TAT2_YEAST : 236- 240: tvcgf Ii-Lc-V vlicg TAT2_YEAST : 236- 241: tvcgf Ii-LcvV licgg TAT2_YEAST : 317- 322: lfffl Is-LtlV gflvp TAT2_YEAST : 366- 371: navil IsvLs-V gnsci UGA4_YEAST : 119- 122: vaaff Il-L--V gitma UGA4_YEAST : 497- 501: afqlf IiiL--V mfpsq UGA4_YEAST : 498- 501: fqlfi Ii-L--V mfpsq VAL1_YEAST : 182- 187: svvyt IqwLt-V lplql VAL1_YEAST : 506- 510: avlia IffL--V cqfwv YBR8_YEAST : 250- 255: miagf Ii-LsiV incgg YBY2_YEAST : 203- 207: dysag Ip-La-V qvvly YBY2_YEAST : 436- 439: iysva Is-L--V walvs YBY2_YEAST : 507- 511: qpyta IigL--V scsam YBY2_YEAST : 508- 511: pytai Ig-L--V scsam YCC5_YEAST : 412- 416: finav Il-Ls-V lsman YCC5_YEAST : 572- 576: ampil Ia-Ly-V gykvw YEEF_ECOLI : 161- 166: nfntv IvvLq-V vliav YEEF_ECOLI : 161- 167: nfntv IvvLqvV liavi YEEF_ECOLI : 278- 282: asqpe Im-Ly-V agkaf YEEF_ECOLI : 342- 345: tpamn Ii-L--V gaial YEEF_ECOLI : 434- 439: aaigl Iy-LacV tksfr YEEF_KLEPN : 21- 25: asqpe Im-Ly-V agktf YEEF_KLEPN : 96- 101: ialla Ik-LdlV tatap YEEF_KLEPN : 174- 177: liwgg Ig-L--V yxacv YFF5_YEAST : 179- 183: wfafe IfqL--V gvglf YFF5_YEAST : 179- 185: wfafe IfqLvgV glfge YFF5_YEAST : 200- 204: lawlk IvgL--V ayyif YFF5_YEAST : 391- 396: nalgl Is-LmnV svgaa YFF5_YEAST : 407- 413: naysy IvnLsgV gvfiv YFF5_YEAST : 486- 490: fvday Il-Lp-V gilly YIFK_ECOLI : 51- 56: llayi IagLf-V ffimr YIFK_ECOLI : 126- 132: emaqw IpaLiaV alval YIFK_ECOLI : 167- 171: ivmiv Ig-Lg-V iffgf YIFK_ECOLI : 436- 441: lfvgi IfmLa-V taiyk YIFK_SALTY : 51- 56: llayi IagLf-V ffimr YIFK_SALTY : 126- 132: emaqw IpaLiaV glval YIFK_SALTY : 166- 171: iivmi IigLg-V iffgf YIFK_SALTY : 167- 171: ivmii Ig-Lg-V iffgf YIFK_SALTY : 340- 345: gvals IliLl-V gscln YIFK_SALTY : 342- 345: alsil Il-L--V gscln YIFK_SALTY : 436- 441: lfvgv IflLa-V tlvyk YIFK_SALTY : 436- 441: lfvgv If-LlaV tlvyk YKR4_YEAST : 224- 230: yaiif IdiLllV fhkgk YKR4_YEAST : 226- 230: iifid IllL--V fhkgk YKR4_YEAST : 226- 230: iifid Il-Ll-V fhkgk YKR4_YEAST : 441- 444: csatf Ip-L--V lvlft YKR4_YEAST : 441- 446: csatf Ip-LvlV lftrr YPEV_LACDL : 167- 171: ikiia IisL--V vtgi YPEV_LACDL : 167- 172: ikiia IisLv-V tgi YPEV_LACDL : 168- 171: kiiai Is-L--V vtgi YPEV_LACDL : 168- 172: kiiai Is-Lv-V tgi G 7: 11.0102 107( 36) I-x(0,1)-L-x(0,2)-V Occurences: 107(36) ALP1_YEAST : 312- 314: kvvvr I-L--V fyils ALP1_YEAST : 323- 327: lslff IgLl-V pyndp ALP1_YEAST : 490- 494: yasff IaLi-V liqgf ANSP_SALTY : 183- 186: vlaiv IfL--V vgtif ANSP_SALTY : 183- 187: vlaiv IfLv-V gtifl ANSP_SALTY : 236- 239: fafas IeL--V gtaag ANSP_SALTY : 264- 269: sviwr IgLfyV gsvvl ANSP_SALTY : 459- 462: lplia IlL--V agwfg ANSP_SALTY : 459- 462: lplia I-Ll-V agwfg AROP_ECOLI : 141- 146: vvina InLtnV kvfge AROP_ECOLI : 337- 339: vpvnt I-L--V salvt CAN1_CANAL : 249- 251: awgdg I-L--V nnngk CAN1_CANAL : 301- 303: kvmfr I-L--V fyvlc CAN1_CANAL : 507- 510: ayisv I-Lf-V vlwvg CAN1_CANAL : 507- 511: ayisv I-LfvV lwvgf CAN1_CANAL : 533- 535: fkmsn I-L--V pldec CAN1_YEAST : 339- 343: gsllf IgLl-V pyndp CTR1_YEAST : 63- 66: fslws I-Lg-V gfglt CYCA_ECOLI : 228- 231: fafvg IeL--V gttaa GABP_BACSU : 130- 134: wltsl I-LtiV ltltn GABP_BACSU : 289- 294: qimnf IvLtaV lscln GABP_BACSU : 367- 371: nssga IaLl-V ylvia GABP_BACSU : 415- 417: iaicg I-L--V smafi GABP_ECOLI : 167- 172: ailaf IfLgaV aisgf GABP_ECOLI : 293- 297: imdcv IlLs-V tscln GABP_ECOLI : 293- 297: imdcv I-LlsV tscln GABP_ECOLI : 370- 374: dssga IaLl-V ylvia GAP1_YEAST : 338- 342: lsllm IgLl-V pyndk GAP1_YEAST : 382- 386: vvnvv I-LiaV lsvgn HIP1_YEAST : 245- 249: iigft I-LgiV lscgg HIP1_YEAST : 381- 386: slmna IiLiaV vsvan HIP1_YEAST : 382- 386: lmnai I-LiaV vsvan HIP1_YEAST : 504- 509: swygf IvLflV liasf HIP1_YEAST : 540- 543: ylsfp I-Li-V cyvgh HUTM_BACSU : 23- 28: rhlfm IsLggV igtgl HUTM_BACSU : 50- 54: gpggt I-LayV igglm INA1_TRIHA : 356- 360: fmnlv I-LasV lsigv ISP5_SCHPO : 330- 334: vlnav I-LisV ltaan ISP5_SCHPO : 454- 457: ygafi IiL--V fitef ISP5_SCHPO : 455- 457: gafii I-L--V fitef LYP1_YEAST : 361- 365: mslff IgLl-V pynds LYP1_YEAST : 556- 560: syisl IlLa-V mfigc LYP1_YEAST : 556- 560: syisl I-LlaV mfigc LYSP_ECOLI : 57- 61: lsyml IgLm-V yflmt LYSP_ECOLI : 248- 253: qvfwr IlLfyV faili LYSP_ECOLI : 303- 307: vmnav I-LtaV lsagn PAP1_YEAST : 228- 231: fnsck I-Lm-V agfii PAP1_YEAST : 235- 239: mvagf IiLs-V vincg PAP1_YEAST : 235- 240: mvagf IiLsvV incgg PAP1_YEAST : 236- 239: vagfi I-Ls-V vincg PAP1_YEAST : 236- 240: vagfi I-LsvV incgg PAP1_YEAST : 278- 280: kgicy I-L--V sayfs PAP1_YEAST : 289- 293: fsfgg IeLf-V lsine PAP1_YEAST : 372- 376: iinav I-LisV isvan PHEP_ECOLI : 300- 302: alnfv I-L--V aslsv PHEP_ECOLI : 439- 443: mrlsa IlLp-V wivfl PHEP_ECOLI : 439- 443: mrlsa I-LlpV wivfl PROY_SALTY : 120- 123: tycfe I-Li-V aiadv PROY_SALTY : 158- 163: liica InLmsV kvfge PUT4_YEAST : 206- 208: fycyv I-L--V aaect PUT4_YEAST : 234- 238: gvwit IfLc-V vviln PUT4_YEAST : 234- 239: gvwit IfLcvV vilnf PUT4_YEAST : 262- 266: fasik I-LciV gliil PUT4_YEAST : 567- 570: yitlp IfL--V lwfgh PUTX_EMENI : 179- 182: glwia IvL--V esefw PUTX_EMENI : 200- 204: aiigl IiLg-V vlffg PUTX_EMENI : 200- 205: aiigl IiLgvV lffgg PUTX_EMENI : 201- 204: iigli I-Lg-V vlffg PUTX_EMENI : 201- 205: iigli I-LgvV lffgg ROCC_BACSU : 20- 25: rhlfm IaLggV igtgl ROCC_BACSU : 162- 167: ikvaa IiLfiV iggaa ROCC_BACSU : 163- 167: kvaai I-LfiV iggaa ROCC_BACSU : 298- 301: vilta I-Ls-V ansgl ROCE_BACSU : 23- 28: rhlfm IsLggV igtgf ROCE_BACSU : 298- 303: nfvil IaLlsV ansgl TAT2_YEAST : 209- 214: avivs InLfgV rgfge TAT2_YEAST : 236- 240: tvcgf IiLc-V vlicg TAT2_YEAST : 236- 241: tvcgf IiLcvV licgg TAT2_YEAST : 237- 240: vcgfi I-Lc-V vlicg TAT2_YEAST : 237- 241: vcgfi I-LcvV licgg TAT2_YEAST : 317- 322: lfffl IsLtlV gflvp TAT2_YEAST : 364- 368: ivnav I-LisV lsvgn UGA4_YEAST : 119- 122: vaaff IlL--V gitma UGA4_YEAST : 119- 122: vaaff I-Ll-V gitma UGA4_YEAST : 498- 501: fqlfi IiL--V mfpsq UGA4_YEAST : 499- 501: qlfii I-L--V mfpsq VAL1_YEAST : 166- 168: tryps I-L--V dpslg VAL1_YEAST : 241- 244: fnsck I-Lm-V igfvi VAL1_YEAST : 334- 336: ymltt I-L--V cflvp VAL1_YEAST : 381- 385: finav I-LisV isvan YBR8_YEAST : 134- 136: liigy I-L--V sfety YBR8_YEAST : 250- 255: miagf IiLsiV incgg YBR8_YEAST : 251- 255: iagfi I-LsiV incgg YBR8_YEAST : 293- 295: knvcy I-L--V tayfs YBR8_YEAST : 387- 391: iinav I-LisV vsvan YBR8_YEAST : 512- 514: gvffn I-L--V fvaqf YBR8_YEAST : 512- 516: gvffn I-LvfV aqfwv YBY2_YEAST : 203- 207: dysag IpLa-V qvvly YBY2_YEAST : 436- 439: iysva IsL--V walvs YBY2_YEAST : 508- 511: pytai IgL--V scsam YCC5_YEAST : 412- 416: finav IlLs-V lsman YCC5_YEAST : 412- 416: finav I-LlsV lsman YCC5_YEAST : 572- 576: ampil IaLy-V gykvw YEEF_ECOLI : 172- 176: vliav I-LgmV vygvf YEEF_ECOLI : 278- 282: asqpe ImLy-V agkaf YEEF_ECOLI : 342- 345: tpamn IiL--V gaial YEEF_ECOLI : 343- 345: pamni I-L--V gaial YEEF_ECOLI : 434- 439: aaigl IyLacV tksfr YEEF_KLEPN : 21- 25: asqpe ImLy-V agktf YEEF_KLEPN : 96- 101: ialla IkLdlV tatap YEEF_KLEPN : 144- 147: hfnyl I-Lp-V cgalt YEEF_KLEPN : 174- 177: liwgg IgL--V yxacv YFF5_YEAST : 284- 286: qtlwr I-L--V vyigi YFF5_YEAST : 284- 287: qtlwr I-Lv-V yigia YFF5_YEAST : 391- 396: nalgl IsLmnV svgaa YFF5_YEAST : 486- 490: fvday IlLp-V gilly YFF5_YEAST : 486- 490: fvday I-LlpV gilly YIFK_ECOLI : 167- 171: ivmiv IgLg-V iffgf YIFK_SALTY : 167- 171: ivmii IgLg-V iffgf YIFK_SALTY : 342- 345: alsil IlL--V gscln YIFK_SALTY : 342- 345: alsil I-Ll-V gscln YIFK_SALTY : 436- 441: lfvgv IfLlaV tlvyk YKR4_YEAST : 226- 230: iifid IlLl-V fhkgk YKR4_YEAST : 226- 230: iifid I-LllV fhkgk YKR4_YEAST : 441- 444: csatf IpL--V lvlft YKR4_YEAST : 441- 446: csatf IpLvlV lftrr YKR4_YEAST : 508- 510: vyvfc I-L--V itgly YPEV_LACDL : 168- 171: kiiai IsL--V vtgi YPEV_LACDL : 168- 172: kiiai IsLv-V tgi H 8: 11.0102 105( 36) I-x(0,1)-L-x(1,3)-V Occurences: 105(36) ALP1_YEAST : 323- 327: lslff IgLl--V pyndp ALP1_YEAST : 490- 494: yasff IaLi--V liqgf ALP1_YEAST : 524- 530: flfla IwLsfqV wfkcr ANSP_SALTY : 183- 187: vlaiv IfLv--V gtifl ANSP_SALTY : 264- 269: sviwr IgLfy-V gsvvl ANSP_SALTY : 356- 361: vpyag I-LatlV vyvvg ANSP_SALTY : 459- 462: lplia I-Ll--V agwfg AROP_ECOLI : 141- 146: vvina InLtn-V kvfge CAN1_CANAL : 301- 306: kvmfr I-LvfyV lcmlf CAN1_CANAL : 507- 510: ayisv I-Lf--V vlwvg CAN1_CANAL : 507- 511: ayisv I-Lfv-V lwvgf CAN1_YEAST : 339- 343: gsllf IgLl--V pyndp CAN1_YEAST : 534- 540: aayis IfLflaV wilfq CTR1_YEAST : 63- 66: fslws I-Lg--V gfglt CYCA_ECOLI : 353- 359: ltfsc IcLlggV vmlyv CYCA_ECOLI : 381- 386: ttvsa I-LfmfV wtiil GABP_BACSU : 130- 134: wltsl I-Lti-V ltltn GABP_BACSU : 289- 294: qimnf IvLta-V lscln GABP_BACSU : 367- 371: nssga IaLl--V ylvia GABP_ECOLI : 116- 121: niaam I-LhswV pgipi GABP_ECOLI : 126- 132: vpgip IwLfslV itlal GABP_ECOLI : 167- 172: ailaf IfLga-V aisgf GABP_ECOLI : 293- 297: imdcv IlLs--V tscln GABP_ECOLI : 293- 297: imdcv I-Lls-V tscln GABP_ECOLI : 370- 374: dssga IaLl--V ylvia GAP1_YEAST : 338- 342: lsllm IgLl--V pyndk GAP1_YEAST : 382- 386: vvnvv I-Lia-V lsvgn HIP1_YEAST : 245- 249: iigft I-Lgi-V lscgg HIP1_YEAST : 381- 386: slmna IiLia-V vsvan HIP1_YEAST : 381- 387: slmna IiLiavV svans HIP1_YEAST : 382- 386: lmnai I-Lia-V vsvan HIP1_YEAST : 382- 387: lmnai I-LiavV svans HIP1_YEAST : 504- 509: swygf IvLfl-V liasf HIP1_YEAST : 540- 543: ylsfp I-Li--V cyvgh HUTM_BACSU : 23- 28: rhlfm IsLgg-V igtgl HUTM_BACSU : 50- 54: gpggt I-Lay-V igglm HUTM_BACSU : 436- 442: dpnqr IaLfcgV pciil INA1_TRIHA : 182- 188: ttaaw IsLflgV iiiin INA1_TRIHA : 356- 360: fmnlv I-Las-V lsigv ISP5_SCHPO : 166- 172: witvf IaLlcfV nmfgv ISP5_SCHPO : 282- 287: vslfy I-LalfV vslli ISP5_SCHPO : 330- 334: vlnav I-Lis-V ltaan LYP1_YEAST : 361- 365: mslff IgLl--V pynds LYP1_YEAST : 556- 560: syisl IlLa--V mfigc LYP1_YEAST : 556- 560: syisl I-Lla-V mfigc LYSP_ECOLI : 57- 61: lsyml IgLm--V yflmt LYSP_ECOLI : 248- 253: qvfwr IlLfy-V faili LYSP_ECOLI : 248- 253: qvfwr I-LlfyV faili LYSP_ECOLI : 303- 307: vmnav I-Lta-V lsagn PAP1_YEAST : 228- 231: fnsck I-Lm--V agfii PAP1_YEAST : 235- 239: mvagf IiLs--V vincg PAP1_YEAST : 235- 240: mvagf IiLsv-V incgg PAP1_YEAST : 236- 239: vagfi I-Ls--V vincg PAP1_YEAST : 236- 240: vagfi I-Lsv-V incgg PAP1_YEAST : 289- 293: fsfgg IeLf--V lsine PAP1_YEAST : 372- 376: iinav I-Lis-V isvan PHEP_ECOLI : 212- 217: gwngl I-LslaV imfsf PHEP_ECOLI : 439- 443: mrlsa IlLp--V wivfl PHEP_ECOLI : 439- 443: mrlsa I-Llp-V wivfl PROY_SALTY : 120- 123: tycfe I-Li--V aiadv PROY_SALTY : 158- 163: liica InLms-V kvfge PUT4_YEAST : 234- 238: gvwit IfLc--V vviln PUT4_YEAST : 234- 239: gvwit IfLcv-V vilnf PUT4_YEAST : 234- 240: gvwit IfLcvvV ilnfs PUT4_YEAST : 262- 266: fasik I-Lci-V gliil PUTX_EMENI : 200- 204: aiigl IiLg--V vlffg PUTX_EMENI : 200- 205: aiigl IiLgv-V lffgg PUTX_EMENI : 201- 204: iigli I-Lg--V vlffg PUTX_EMENI : 201- 205: iigli I-Lgv-V lffgg PUTX_EMENI : 291- 296: vftfy I-LgslV igvtv ROCC_BACSU : 20- 25: rhlfm IaLgg-V igtgl ROCC_BACSU : 162- 167: ikvaa IiLfi-V iggaa ROCC_BACSU : 163- 167: kvaai I-Lfi-V iggaa ROCC_BACSU : 298- 301: vilta I-Ls--V ansgl ROCC_BACSU : 433- 439: ipdqr IgLycgV piiif ROCE_BACSU : 23- 28: rhlfm IsLgg-V igtgf ROCE_BACSU : 298- 303: nfvil IaLls-V ansgl ROCE_BACSU : 435- 441: dpeqr IaLycgV pfmii TAT2_YEAST : 209- 214: avivs InLfg-V rgfge TAT2_YEAST : 236- 240: tvcgf IiLc--V vlicg TAT2_YEAST : 236- 241: tvcgf IiLcv-V licgg TAT2_YEAST : 237- 240: vcgfi I-Lc--V vlicg TAT2_YEAST : 237- 241: vcgfi I-Lcv-V licgg TAT2_YEAST : 317- 322: lfffl IsLtl-V gflvp TAT2_YEAST : 364- 368: ivnav I-Lis-V lsvgn UGA4_YEAST : 119- 122: vaaff I-Ll--V gitma UGA4_YEAST : 420- 425: vpffa I-LaacV gslil VAL1_YEAST : 241- 244: fnsck I-Lm--V igfvi VAL1_YEAST : 381- 385: finav I-Lis-V isvan YBR8_YEAST : 213- 218: npdiy I-LifyV flvfi YBR8_YEAST : 250- 255: miagf IiLsi-V incgg YBR8_YEAST : 251- 255: iagfi I-Lsi-V incgg YBR8_YEAST : 387- 391: iinav I-Lis-V vsvan YBR8_YEAST : 387- 392: iinav I-LisvV svans YBR8_YEAST : 512- 516: gvffn I-Lvf-V aqfwv YBY2_YEAST : 133- 138: lwcvp I-LcitV staem YBY2_YEAST : 203- 207: dysag IpLa--V qvvly YBY2_YEAST : 203- 209: dysag IpLavqV vlyll YBY2_YEAST : 380- 385: nlkir I-LpdiV niali YCC5_YEAST : 366- 372: flati IlLgflV pynsd YCC5_YEAST : 412- 416: finav IlLs--V lsman YCC5_YEAST : 412- 416: finav I-Lls-V lsman YCC5_YEAST : 572- 576: ampil IaLy--V gykvw YEEF_ECOLI : 172- 176: vliav I-Lgm-V vygvf YEEF_ECOLI : 172- 177: vliav I-LgmvV ygvfe YEEF_ECOLI : 278- 282: asqpe ImLy--V agkaf YEEF_ECOLI : 434- 439: aaigl IyLac-V tksfr YEEF_KLEPN : 21- 25: asqpe ImLy--V agktf YEEF_KLEPN : 96- 101: ialla IkLdl-V tatap YEEF_KLEPN : 107- 113: tatap InLgalV aftfv YEEF_KLEPN : 144- 147: hfnyl I-Lp--V cgalt YFF5_YEAST : 284- 287: qtlwr I-Lv--V yigia YFF5_YEAST : 391- 396: nalgl IsLmn-V svgaa YFF5_YEAST : 486- 490: fvday IlLp--V gilly YFF5_YEAST : 486- 490: fvday I-Llp-V gilly YIFK_ECOLI : 167- 171: ivmiv IgLg--V iffgf YIFK_ECOLI : 244- 249: kvlwr I-LifyV gaifv YIFK_SALTY : 167- 171: ivmii IgLg--V iffgf YIFK_SALTY : 244- 249: kvlwr I-LifyV gaifv YIFK_SALTY : 340- 345: gvals I-LillV gscln YIFK_SALTY : 342- 345: alsil I-Ll--V gscln YIFK_SALTY : 436- 441: lfvgv IfLla-V tlvyk YKR4_YEAST : 226- 230: iifid IlLl--V fhkgk YKR4_YEAST : 226- 230: iifid I-Lll-V fhkgk YKR4_YEAST : 441- 446: csatf IpLvl-V lftrr YPEV_LACDL : 168- 172: kiiai IsLv--V tgi I 9: 11.0102 118( 36) I-x(0,2)-L-x(1,2)-V Occurences: 118(36) ALP1_YEAST : 323- 327: lslff Ig-Ll-V pyndp ALP1_YEAST : 490- 494: yasff Ia-Li-V liqgf ANSP_SALTY : 176- 182: fwfal IkvLaiV iflvv ANSP_SALTY : 183- 187: vlaiv If-Lv-V gtifl ANSP_SALTY : 264- 269: sviwr Ig-LfyV gsvvl ANSP_SALTY : 457- 462: aslpl IaiLl-V agwfg ANSP_SALTY : 459- 462: lplia I--Ll-V agwfg AROP_ECOLI : 141- 146: vvina In-LtnV kvfge AROP_ECOLI : 250- 255: ilify IgsLa-V llslm CAN1_CANAL : 100- 105: pvmsl IsfLf-V tticf CAN1_CANAL : 507- 510: ayisv I--Lf-V vlwvg CAN1_CANAL : 507- 511: ayisv I--LfvV lwvgf CAN1_YEAST : 214- 220: wviit ImnLfpV kyyge CAN1_YEAST : 339- 343: gsllf Ig-Ll-V pyndp CTR1_YEAST : 63- 66: fslws I--Lg-V gfglt CTR1_YEAST : 316- 322: amffs IqdLdaV lsstt CYCA_ECOLI : 172- 177: ikiva IvsLi-V vglvm CYCA_ECOLI : 172- 178: ikiva IvsLivV glvmv CYCA_ECOLI : 353- 359: ltfsc IclLggV vmlyv GABP_BACSU : 130- 134: wltsl I--LtiV ltltn GABP_BACSU : 162- 167: kvvti IafLi-V gfafi GABP_BACSU : 289- 294: qimnf Iv-LtaV lscln GABP_BACSU : 367- 371: nssga Ia-Ll-V ylvia GABP_ECOLI : 167- 172: ailaf If-LgaV aisgf GABP_ECOLI : 293- 297: imdcv Il-Ls-V tscln GABP_ECOLI : 293- 297: imdcv I--LlsV tscln GABP_ECOLI : 370- 374: dssga Ia-Ll-V ylvia GAP1_YEAST : 338- 342: lsllm Ig-Ll-V pyndk GAP1_YEAST : 371- 377: ikthg IkgLpsV vnvvi GAP1_YEAST : 382- 386: vvnvv I--LiaV lsvgn GAP1_YEAST : 384- 389: nvvil IavLs-V gnsai HIP1_YEAST : 245- 249: iigft I--LgiV lscgg HIP1_YEAST : 381- 386: slmna Ii-LiaV vsvan HIP1_YEAST : 382- 386: lmnai I--LiaV vsvan HIP1_YEAST : 504- 509: swygf Iv-LflV liasf HIP1_YEAST : 540- 543: ylsfp I--Li-V cyvgh HUTM_BACSU : 23- 28: rhlfm Is-LggV igtgl HUTM_BACSU : 50- 54: gpggt I--LayV igglm INA1_TRIHA : 305- 311: itify IlgLffV gllin INA1_TRIHA : 356- 360: fmnlv I--LasV lsigv ISP5_SCHPO : 166- 172: witvf IalLcfV nmfgv ISP5_SCHPO : 282- 287: vslfy IlaLf-V vslli ISP5_SCHPO : 282- 288: vslfy IlaLfvV sllis ISP5_SCHPO : 319- 325: lmdak IrgLphV lnavi ISP5_SCHPO : 330- 334: vlnav I--LisV ltaan LYP1_YEAST : 265- 271: imgyl IyaLiiV cggsh LYP1_YEAST : 361- 365: mslff Ig-Ll-V pynds LYP1_YEAST : 556- 560: syisl Il-La-V mfigc LYP1_YEAST : 556- 560: syisl I--LlaV mfigc LYSP_ECOLI : 57- 61: lsyml Ig-Lm-V yflmt LYSP_ECOLI : 248- 253: qvfwr Il-LfyV faili LYSP_ECOLI : 303- 307: vmnav I--LtaV lsagn PAP1_YEAST : 168- 173: twlfc IqwLt-V lplel PAP1_YEAST : 228- 231: fnsck I--Lm-V agfii PAP1_YEAST : 235- 239: mvagf Ii-Ls-V vincg PAP1_YEAST : 235- 240: mvagf Ii-LsvV incgg PAP1_YEAST : 236- 239: vagfi I--Ls-V vincg PAP1_YEAST : 236- 240: vagfi I--LsvV incgg PAP1_YEAST : 289- 293: fsfgg Ie-Lf-V lsine PAP1_YEAST : 372- 376: iinav I--LisV isvan PHEP_ECOLI : 212- 217: gwngl IlsLa-V imfsf PHEP_ECOLI : 258- 263: illfy IgsLv-V llaly PHEP_ECOLI : 351- 356: mlsga ItsLv-V linyl PHEP_ECOLI : 439- 443: mrlsa Il-Lp-V wivfl PHEP_ECOLI : 439- 443: mrlsa I--LlpV wivfl PROY_SALTY : 120- 123: tycfe I--Li-V aiadv PROY_SALTY : 146- 151: avphw IwvLs-V vliic PROY_SALTY : 146- 152: avphw IwvLsvV liica PROY_SALTY : 158- 163: liica In-LmsV kvfge PROY_SALTY : 223- 229: gwlgm ImsLqmV mfayg PUT4_YEAST : 234- 238: gvwit If-Lc-V vviln PUT4_YEAST : 234- 239: gvwit If-LcvV vilnf PUT4_YEAST : 260- 266: fwfas IkiLciV gliil PUT4_YEAST : 262- 266: fasik I--LciV gliil PUTX_EMENI : 200- 204: aiigl Ii-Lg-V vlffg PUTX_EMENI : 200- 205: aiigl Ii-LgvV lffgg PUTX_EMENI : 201- 204: iigli I--Lg-V vlffg PUTX_EMENI : 201- 205: iigli I--LgvV lffgg ROCC_BACSU : 20- 25: rhlfm Ia-LggV igtgl ROCC_BACSU : 139- 144: ivifl InaLs-V rsfae ROCC_BACSU : 162- 167: ikvaa Ii-LfiV iggaa ROCC_BACSU : 163- 167: kvaai I--LfiV iggaa ROCC_BACSU : 298- 301: vilta I--Ls-V ansgl ROCE_BACSU : 23- 28: rhlfm Is-LggV igtgf ROCE_BACSU : 298- 303: nfvil IalLs-V ansgl ROCE_BACSU : 298- 303: nfvil Ia-LlsV ansgl TAT2_YEAST : 209- 214: avivs In-LfgV rgfge TAT2_YEAST : 236- 240: tvcgf Ii-Lc-V vlicg TAT2_YEAST : 236- 241: tvcgf Ii-LcvV licgg TAT2_YEAST : 237- 240: vcgfi I--Lc-V vlicg TAT2_YEAST : 237- 241: vcgfi I--LcvV licgg TAT2_YEAST : 317- 322: lfffl Is-LtlV gflvp TAT2_YEAST : 364- 368: ivnav I--LisV lsvgn TAT2_YEAST : 366- 371: navil IsvLs-V gnsci UGA4_YEAST : 119- 122: vaaff I--Ll-V gitma VAL1_YEAST : 182- 187: svvyt IqwLt-V lplql VAL1_YEAST : 241- 244: fnsck I--Lm-V igfvi VAL1_YEAST : 381- 385: finav I--LisV isvan YBR8_YEAST : 250- 255: miagf Ii-LsiV incgg YBR8_YEAST : 251- 255: iagfi I--LsiV incgg YBR8_YEAST : 387- 391: iinav I--LisV vsvan YBR8_YEAST : 512- 516: gvffn I--LvfV aqfwv YBY2_YEAST : 203- 207: dysag Ip-La-V qvvly YCC5_YEAST : 412- 416: finav Il-Ls-V lsman YCC5_YEAST : 412- 416: finav I--LlsV lsman YCC5_YEAST : 572- 576: ampil Ia-Ly-V gykvw YEEF_ECOLI : 161- 166: nfntv IvvLq-V vliav YEEF_ECOLI : 161- 167: nfntv IvvLqvV liavi YEEF_ECOLI : 172- 176: vliav I--LgmV vygvf YEEF_ECOLI : 278- 282: asqpe Im-Ly-V agkaf YEEF_ECOLI : 434- 439: aaigl Iy-LacV tksfr YEEF_KLEPN : 21- 25: asqpe Im-Ly-V agktf YEEF_KLEPN : 96- 101: ialla Ik-LdlV tatap YEEF_KLEPN : 144- 147: hfnyl I--Lp-V cgalt YFF5_YEAST : 179- 185: wfafe IfqLvgV glfge YFF5_YEAST : 284- 287: qtlwr I--Lv-V yigia YFF5_YEAST : 391- 396: nalgl Is-LmnV svgaa YFF5_YEAST : 407- 413: naysy IvnLsgV gvfiv YFF5_YEAST : 486- 490: fvday Il-Lp-V gilly YFF5_YEAST : 486- 490: fvday I--LlpV gilly YIFK_ECOLI : 51- 56: llayi IagLf-V ffimr YIFK_ECOLI : 126- 132: emaqw IpaLiaV alval YIFK_ECOLI : 167- 171: ivmiv Ig-Lg-V iffgf YIFK_ECOLI : 436- 441: lfvgi IfmLa-V taiyk YIFK_SALTY : 51- 56: llayi IagLf-V ffimr YIFK_SALTY : 126- 132: emaqw IpaLiaV glval YIFK_SALTY : 166- 171: iivmi IigLg-V iffgf YIFK_SALTY : 167- 171: ivmii Ig-Lg-V iffgf YIFK_SALTY : 340- 345: gvals IliLl-V gscln YIFK_SALTY : 342- 345: alsil I--Ll-V gscln YIFK_SALTY : 436- 441: lfvgv IflLa-V tlvyk YIFK_SALTY : 436- 441: lfvgv If-LlaV tlvyk YKR4_YEAST : 224- 230: yaiif IdiLllV fhkgk YKR4_YEAST : 226- 230: iifid Il-Ll-V fhkgk YKR4_YEAST : 226- 230: iifid I--LllV fhkgk YKR4_YEAST : 441- 446: csatf Ip-LvlV lftrr YPEV_LACDL : 167- 172: ikiia IisLv-V tgi YPEV_LACDL : 168- 172: kiiai Is-Lv-V tgi J 10: 11.0102 115( 36) I-x(2,3)-L-x(0,2)-V Occurences: 115(36) ALP1_YEAST : 323- 327: lslff Igl-L--V pyndp ALP1_YEAST : 552- 556: sdhrq Iee-L--V wiepe ANSP_SALTY : 176- 182: fwfal Ikv-LaiV iflvv ANSP_SALTY : 181- 186: ikvla IvifL--V vgtif ANSP_SALTY : 181- 187: ikvla IvifLv-V gtifl ANSP_SALTY : 356- 361: vpyag IlatL--V vyvvg ANSP_SALTY : 356- 362: vpyag IlatLv-V yvvgv ANSP_SALTY : 457- 462: aslpl IailL--V agwfg ANSP_SALTY : 457- 462: aslpl Iai-Ll-V agwfg AROP_ECOLI : 250- 255: ilify Igs-La-V llslm AROP_ECOLI : 427- 434: trgmg IwvyLipV wlivl AROP_ECOLI : 432- 438: iwvyl IpvwLi-V lgigy CAN1_CANAL : 100- 105: pvmsl Isf-Lf-V tticf CAN1_CANAL : 504- 510: fftay IsviLf-V vlwvg CAN1_CANAL : 504- 511: fftay IsviLfvV lwvgf CAN1_YEAST : 214- 220: wviit Imn-LfpV kyyge CAN1_YEAST : 339- 343: gsllf Igl-L--V pyndp CAN1_YEAST : 534- 540: aayis IflfLa-V wilfq CTR1_YEAST : 316- 322: amffs Iqd-LdaV lsstt CYCA_ECOLI : 63- 70: fvymi IgfmLffV mramg CYCA_ECOLI : 172- 177: ikiva Ivs-Li-V vglvm CYCA_ECOLI : 172- 178: ikiva Ivs-LivV glvmv CYCA_ECOLI : 176- 181: aivsl IvvgL--V mvamh CYCA_ECOLI : 176- 183: aivsl IvvgLvmV amhfq CYCA_ECOLI : 353- 359: ltfsc Icl-LggV vmlyv GABP_BACSU : 26- 32: siagv IgagLf-V gsgsv GABP_BACSU : 133- 140: slilt IvltLtnV ysvks GABP_BACSU : 161- 167: ikvvt IiafLi-V gfafi GABP_BACSU : 162- 167: kvvti Iaf-Li-V gfafi GABP_BACSU : 367- 371: nssga Ial-L--V ylvia GABP_BACSU : 412- 417: ltiia IcgiL--V smafi GABP_BACSU : 441- 445: tgivl Isy-L--V frkrk GABP_ECOLI : 28- 34: siagv IgasLf-V gssva GABP_ECOLI : 370- 374: dssga Ial-L--V ylvia GABP_ECOLI : 414- 419: lvigf ItfvL--V vmlfr GABP_ECOLI : 414- 420: lvigf ItfvLv-V mlfrp GAP1_YEAST : 104- 110: aigga IgtgLl-V gsgta GAP1_YEAST : 338- 342: lsllm Igl-L--V pyndk GAP1_YEAST : 371- 377: ikthg Ikg-LpsV vnvvi GAP1_YEAST : 384- 389: nvvil Iav-Ls-V gnsai HIP1_YEAST : 104- 110: avgga IgtgLy-V ntgaa HIP1_YEAST : 131- 138: idwvi IstcLftV inslg HIP1_YEAST : 337- 341: tiltl Igc-L--V psndp HIP1_YEAST : 504- 509: swygf IvlfL--V liasf HUTM_BACSU : 297- 304: imnfv IltaLlsV ansgl INA1_TRIHA : 182- 188: ttaaw IslfLg-V iiiin INA1_TRIHA : 221- 226: vifmi IafvL--V lgggp INA1_TRIHA : 305- 311: itify Ilg-LffV gllin ISP5_SCHPO : 82- 87: aasvl IcysL--V gsmvl ISP5_SCHPO : 166- 172: witvf Ial-LcfV nmfgv ISP5_SCHPO : 282- 287: vslfy Ila-Lf-V vslli ISP5_SCHPO : 282- 288: vslfy Ila-LfvV sllis ISP5_SCHPO : 319- 325: lmdak Irg-LphV lnavi ISP5_SCHPO : 453- 457: cygaf Iii-L--V fitef LYP1_YEAST : 124- 130: alggt IgtgLf-V gistp LYP1_YEAST : 265- 271: imgyl Iya-LiiV cggsh LYP1_YEAST : 361- 365: mslff Igl-L--V pynds LYP1_YEAST : 553- 560: fftsy IsliLlaV mfigc LYSP_ECOLI : 30- 36: aiggs IgtgLf-V asgat LYSP_ECOLI : 109- 114: nwavt IavdL--V aaqlv PAP1_YEAST : 94- 100: slgtg IgtgLl-V anakg PAP1_YEAST : 168- 173: twlfc Iqw-Lt-V lplel PAP1_YEAST : 275- 280: trfkg IcyiL--V sayfs PHEP_ECOLI : 212- 217: gwngl Ils-La-V imfsf PHEP_ECOLI : 258- 262: illfy Igs-L--V vllal PHEP_ECOLI : 258- 263: illfy Igs-Lv-V llaly PHEP_ECOLI : 351- 355: mlsga Its-L--V vliny PHEP_ECOLI : 351- 356: mlsga Its-Lv-V linyl PROY_SALTY : 146- 151: avphw Iwv-Ls-V vliic PROY_SALTY : 146- 152: avphw Iwv-LsvV liica PROY_SALTY : 223- 229: gwlgm Ims-LqmV mfayg PUT4_YEAST : 124- 130: algga IgtgLl-V gtsst PUT4_YEAST : 232- 238: pkgvw ItifLc-V vviln PUT4_YEAST : 232- 239: pkgvw ItifLcvV vilnf PUT4_YEAST : 260- 266: fwfas Iki-LciV gliil PUTX_EMENI : 55- 61: aiggc IgtgLf-V gtstv PUTX_EMENI : 177- 182: svglw IaivL--V esefw PUTX_EMENI : 291- 296: vftfy IlgsL--V igvtv PUTX_EMENI : 328- 332: pfvva Ikt-L--V legst PUTX_EMENI : 431- 435: wvlig Iay-L--V cfpps ROCC_BACSU : 127- 131: svpiw Iwc-L--V fgivi ROCC_BACSU : 139- 144: ivifl Ina-Ls-V rsfae ROCE_BACSU : 130- 134: hidvw Iwc-L--V faalm ROCE_BACSU : 296- 303: imnfv IliaLlsV ansgl ROCE_BACSU : 298- 303: nfvil Ial-Ls-V ansgl ROCE_BACSU : 415- 422: pvlpl IgltLntV vlisl TAT2_YEAST : 96- 102: aiggs IgtgLf-V gsgka TAT2_YEAST : 317- 322: lfffl IsltL--V gflvp TAT2_YEAST : 366- 371: navil Isv-Ls-V gnsci UGA4_YEAST : 497- 501: afqlf Iii-L--V mfpsq VAL1_YEAST : 108- 114: slgtg IgtgLl-V gngqv VAL1_YEAST : 182- 187: svvyt Iqw-Lt-V lplql VAL1_YEAST : 506- 510: avlia Iff-L--V cqfwv YBR8_YEAST : 109- 115: slgtg IgtgLl-V anakg YBR8_YEAST : 131- 136: paali IgyiL--V sfety YBY2_YEAST : 102- 108: aisgv IgtaLf-V aigka YBY2_YEAST : 507- 511: qpyta Iig-L--V scsam YCC5_YEAST : 134- 140: algtg IgtgLl-V gngta YCC5_YEAST : 240- 245: dvfvi IfyvL--V itini YCC5_YEAST : 570- 576: ylamp IliaLy-V gykvw YEEF_ECOLI : 161- 166: nfntv Ivv-Lq-V vliav YEEF_ECOLI : 161- 167: nfntv Ivv-LqvV liavi YEEF_ECOLI : 169- 176: lqvvl IaviLgmV vygvf YEEF_ECOLI : 353- 358: ialla InfdL--V matal YEEF_KLEPN : 96- 101: ialla IkldL--V tatap YFF5_YEAST : 179- 183: wfafe Ifq-L--V gvglf YFF5_YEAST : 179- 185: wfafe Ifq-LvgV glfge YFF5_YEAST : 200- 204: lawlk Ivg-L--V ayyif YFF5_YEAST : 407- 413: naysy Ivn-LsgV gvfiv YIFK_ECOLI : 50- 56: vllay IiagLf-V ffimr YIFK_ECOLI : 51- 56: llayi Iag-Lf-V ffimr YIFK_ECOLI : 126- 132: emaqw Ipa-LiaV alval YIFK_ECOLI : 130- 135: wipal IavaL--V alanl YIFK_ECOLI : 165- 171: tiivm IvigLg-V iffgf YIFK_ECOLI : 435- 441: slfvg IifmLa-V taiyk YIFK_ECOLI : 436- 441: lfvgi Ifm-La-V taiyk YIFK_SALTY : 50- 56: vllay IiagLf-V ffimr YIFK_SALTY : 51- 56: llayi Iag-Lf-V ffimr YIFK_SALTY : 126- 132: emaqw Ipa-LiaV glval YIFK_SALTY : 130- 135: wipal IavgL--V alanl YIFK_SALTY : 165- 171: tiivm IiigLg-V iffgf YIFK_SALTY : 166- 171: iivmi Iig-Lg-V iffgf YIFK_SALTY : 340- 345: gvals IlilL--V gscln YIFK_SALTY : 340- 345: gvals Ili-Ll-V gscln YIFK_SALTY : 436- 441: lfvgv Ifl-La-V tlvyk YKR4_YEAST : 186- 191: ifytv IvfyL--V vtvvg YKR4_YEAST : 186- 192: ifytv IvfyLv-V tvvgl YKR4_YEAST : 224- 230: yaiif IdilLl-V fhkgk YKR4_YEAST : 224- 230: yaiif Idi-LllV fhkgk YKR4_YEAST : 226- 230: iifid Ill-L--V fhkgk YKR4_YEAST : 441- 446: csatf IplvL--V lftrr YPEV_LACDL : 167- 171: ikiia Iis-L--V vtgi YPEV_LACDL : 167- 172: ikiia Iis-Lv-V tgi K 11: 11.0102 104( 36) A-x(0,1)-I-x(1,3)-L Occurences: 104(36) ALP1_YEAST : 105- 110: agpvg AlIsy-L fmgtv ALP1_YEAST : 491- 495: asffi AlIv--L iqgft ALP1_YEAST : 514- 520: idfva AyIsvfL flaiw ALP1_YEAST : 523- 526: vflfl A-Iw--L sfqvw ANSP_SALTY : 43- 48: iaigg A-IgtgL flgag ANSP_SALTY : 174- 179: mefwf AlIkv-L aivif ANSP_SALTY : 180- 185: likvl A-IvifL vvgti ANSP_SALTY : 234- 238: vvfaf AsIe--L vgtaa ANSP_SALTY : 354- 360: qhvpy AgIlatL vvyvv ANSP_SALTY : 458- 461: slpli A-Il--L vagwf AROP_ECOLI : 140- 143: fvvin A-In--L tnvkv AROP_ECOLI : 375- 379: lvinw AmIs--L ahmkf CAN1_CANAL : 502- 508: sdfft AyIsviL fvvlw CAN1_YEAST : 122- 127: agpvg AlIsy-L fmgsl CAN1_YEAST : 178- 183: ywfsw A-ItfaL elsvv CAN1_YEAST : 231- 236: fefwv AsIkv-L aiigf CAN1_YEAST : 237- 242: sikvl AiIgf-L iycfc CAN1_YEAST : 237- 242: sikvl A-IigfL iycfc CAN1_YEAST : 530- 536: vsfaa AyIsifL flavw CTR1_YEAST : 258- 263: knggi AfIvg-L inpaw CTR1_YEAST : 345- 348: gnksg A-If--L gclil CTR1_YEAST : 405- 409: hlmsc AwIt--L iglly CYCA_ECOLI : 36- 41: iaigg A-IgtgL fmgsg CYCA_ECOLI : 141- 145: wvasl AvIv--L lltln CYCA_ECOLI : 141- 146: wvasl AvIvl-L ltlnl CYCA_ECOLI : 141- 147: wvasl AvIvllL tlnla CYCA_ECOLI : 171- 175: mikiv A-Ivs-L ivvgl GABP_BACSU : 252- 257: yvgsi A-IvvaL lpwns GABP_BACSU : 366- 369: vnssg A-Ia--L lvylv GABP_BACSU : 366- 370: vnssg A-Ial-L vylvi GABP_BACSU : 411- 416: yltii A-IcgiL vsmaf GABP_ECOLI : 165- 169: viail AfIf--L gavai GABP_ECOLI : 369- 372: idssg A-Ia--L lvylv GABP_ECOLI : 369- 373: idssg A-Ial-L vylvi GAP1_YEAST : 103- 108: iaigg A-IgtgL lvgsg HIP1_YEAST : 103- 108: lavgg A-IgtgL yvntg HIP1_YEAST : 212- 216: vaify AtIa--L anmld HIP1_YEAST : 380- 383: pslmn A-Ii--L iavvs HIP1_YEAST : 405- 410: cmvam AhIgn-L pkfln HIP1_YEAST : 426- 429: grpmn A-Il--L tlffg HIP1_YEAST : 426- 431: grpmn A-IlltL ffgll HIP1_YEAST : 466- 469: ifcwm A-In--L shirf HUTM_BACSU : 133- 138: vwmws A-IfaaL lficn INA1_TRIHA : 180- 184: eitta AwIs--L flgvi INA1_TRIHA : 180- 186: eitta AwIslfL gviii INA1_TRIHA : 428- 432: fdwll A-Isg-L aalft ISP5_SCHPO : 146- 150: lelit AsIc--L qfwin ISP5_SCHPO : 317- 322: lalmd AkIrg-L phvln ISP5_SCHPO : 451- 456: gacyg AfIii-L vfite LYP1_YEAST : 259- 264: svkvl A-ImgyL iyali LYSP_ECOLI : 423- 428: lgpif AfIlc-L iitlg PAP1_YEAST : 443- 448: aftwl AaIag-L selft PAP1_YEAST : 444- 448: ftwla A-Iag-L selft PHEP_ECOLI : 36- 41: ialgg A-IgtgL flgig PHEP_ECOLI : 63- 69: lgygv AgIiafL imrql PHEP_ECOLI : 165- 170: tefwf AlIkv-L aiigm PHEP_ECOLI : 192- 197: hggek AsIdn-L wrygg PHEP_ECOLI : 350- 354: lmlsg A-Its-L vvlin PHEP_ECOLI : 438- 441: dmrls A-Il--L pvwiv PROY_SALTY : 45- 50: malgs A-IgtgL fygsa PROY_SALTY : 157- 160: vliic A-In--L msvkv PUT4_YEAST : 123- 128: ialgg A-IgtgL lvgts PUT4_YEAST : 258- 263: sefwf AsIki-L civgl PUT4_YEAST : 400- 405: igiqn AgIkv-L phiin PUT4_YEAST : 561- 565: adfia AyIt--L piflv PUTX_EMENI : 178- 181: vglwi A-Iv--L vesef PUTX_EMENI : 195- 199: glkil AiIg--L iilgv PUTX_EMENI : 195- 199: glkil A-Iig-L iilgv PUTX_EMENI : 327- 331: spfvv A-Ikt-L vlegs PUTX_EMENI : 513- 516: syivf A-If--L alyag PUTX_EMENI : 513- 518: syivf A-IflaL yaghk ROCC_BACSU : 160- 164: ssikv AaIi--L fivig ROCC_BACSU : 161- 164: sikva A-Ii--L fivig ROCE_BACSU : 109- 113: wavtc A-Ief-L sagql TAT2_YEAST : 347- 350: spfvi A-Ik--L hhika TAT2_YEAST : 436- 440: fnwlm A-Iag-L atciv TAT2_YEAST : 485- 490: gsays AlInc-L iliaq TAT2_YEAST : 523- 527: qnylc AlIm--L fifiv UGA4_YEAST : 222- 226: cvasg A-Iar-L qtlsi VAL1_YEAST : 135- 139: lgygi AsIm--L yciiq VAL1_YEAST : 453- 457: ftwll A-Iss-L sqlfi VAL1_YEAST : 505- 509: lavli A-Iff-L vcqfw YBR8_YEAST : 458- 463: vftwl AaIag-L selft YBR8_YEAST : 459- 463: ftwla A-Iag-L selft YBY2_YEAST : 109- 114: talfv A-IgkaL yrggp YBY2_YEAST : 201- 205: rddys AgIp--L avqvv YBY2_YEAST : 435- 438: piysv A-Is--L vwalv YBY2_YEAST : 506- 510: gqpyt AiIg--L vscsa YBY2_YEAST : 506- 510: gqpyt A-Iig-L vscsa YCC5_YEAST : 363- 367: lflfl AtIi--L lgflv YCC5_YEAST : 363- 368: lflfl AtIil-L gflvp YCC5_YEAST : 410- 414: phfin AvIl--L svlsm YCC5_YEAST : 484- 488: ftwll A-Isg-L sqlft YCC5_YEAST : 496- 499: lftwt A-Ic--L shlrf YCC5_YEAST : 532- 538: wgsay AcImmiL iliaq YEEF_ECOLI : 60- 65: tayaf AlIai-L ftals YEEF_ECOLI : 239- 242: rvipr A-If--L talig YEEF_ECOLI : 347- 350: iilvg A-Ia--L lainf YEEF_ECOLI : 347- 351: iilvg A-Ial-L ainfd YEEF_ECOLI : 352- 357: aiall A-InfdL vmata YEEF_ECOLI : 429- 433: lgliw AaIg--L iylac YEEF_ECOLI : 430- 433: gliwa A-Ig--L iylac YEEF_KLEPN : 90- 93: vllvx A-Ia--L laikl YEEF_KLEPN : 90- 94: vllvx A-Ial-L aikld YEEF_KLEPN : 95- 98: aiall A-Ik--L dlvta YEEF_KLEPN : 95- 100: aiall A-IkldL vtata YEEF_KLEPN : 105- 109: lvtat ApIn--L galva YFF5_YEAST : 344- 349: itcis A-IngsL yigsr YFF5_YEAST : 460- 464: vlsla AnIf--L aliqg YFF5_YEAST : 460- 466: vlsla AnIflaL iqgws YFF5_YEAST : 484- 488: gnfvd AyIl--L pvgil YIFK_ECOLI : 48- 54: psvll AyIiagL fvffi YIFK_ECOLI : 128- 134: aqwip AlIavaL valan YIFK_ECOLI : 341- 344: vavsi A-Il--L iahaw YIFK_SALTY : 48- 54: psvll AyIiagL fvffi YIFK_SALTY : 128- 134: aqwip AlIavgL valan YKR4_YEAST : 80- 83: mctsm A-Ig--L inggp YPEV_LACDL : 56- 60: vifiy A-Img-L ffffl YPEV_LACDL : 166- 170: mikii AiIs--L vvtgi YPEV_LACDL : 166- 170: mikii A-Iis-L vvtgi L 12: 11.0102 103( 36) A-x(0,2)-I-x(2,3)-L Occurences: 103(36) ALP1_YEAST : 105- 110: agpvg Al-Isy-L fmgtv ALP1_YEAST : 513- 520: pidfv AayIsvfL flaiw ALP1_YEAST : 514- 520: idfva Ay-IsvfL flaiw ANSP_SALTY : 43- 48: iaigg A--IgtgL flgag ANSP_SALTY : 174- 179: mefwf Al-Ikv-L aivif ANSP_SALTY : 180- 185: likvl A--IvifL vvgti ANSP_SALTY : 354- 360: qhvpy Ag-IlatL vvyvv AROP_ECOLI : 55- 61: lgyai AgfIaf-L imrql AROP_ECOLI : 59- 66: iagfi AflImrqL gemvv AROP_ECOLI : 287- 293: tfvan AlnIvv-L taals CAN1_CANAL : 502- 508: sdfft Ay-IsviL fvvlw CAN1_YEAST : 122- 127: agpvg Al-Isy-L fmgsl CAN1_YEAST : 178- 183: ywfsw A--ItfaL elsvv CAN1_YEAST : 231- 236: fefwv As-Ikv-L aiigf CAN1_YEAST : 237- 242: sikvl Ai-Igf-L iycfc CAN1_YEAST : 237- 242: sikvl A--IigfL iycfc CAN1_YEAST : 529- 536: gvsfa AayIsifL flavw CAN1_YEAST : 530- 536: vsfaa Ay-IsifL flavw CTR1_YEAST : 258- 263: knggi Af-Ivg-L inpaw CYCA_ECOLI : 36- 41: iaigg A--IgtgL fmgsg CYCA_ECOLI : 141- 146: wvasl Av-Ivl-L ltlnl CYCA_ECOLI : 141- 147: wvasl Av-IvllL tlnla CYCA_ECOLI : 171- 175: mikiv A--Ivs-L ivvgl GABP_BACSU : 23- 30: tmisi AgvIgagL fvgsg GABP_BACSU : 252- 257: yvgsi A--IvvaL lpwns GABP_BACSU : 366- 370: vnssg A--Ial-L vylvi GABP_BACSU : 393- 400: ktnpe AlkIkmwL fpflt GABP_BACSU : 411- 416: yltii A--IcgiL vsmaf GABP_ECOLI : 25- 32: tmlsi AgvIgasL fvgss GABP_ECOLI : 369- 373: idssg A--Ial-L vylvi GAP1_YEAST : 103- 108: iaigg A--IgtgL lvgsg HIP1_YEAST : 103- 108: lavgg A--IgtgL yvntg HIP1_YEAST : 405- 410: cmvam Ah-Ign-L pkfln HIP1_YEAST : 426- 431: grpmn A--IlltL ffgll HUTM_BACSU : 52- 58: ggtil AyvIgg-L mmylv HUTM_BACSU : 133- 138: vwmws A--IfaaL lficn HUTM_BACSU : 257- 264: iffig AvfIlsgL iswkd INA1_TRIHA : 179- 186: seitt AawIslfL gviii INA1_TRIHA : 180- 186: eitta Aw-IslfL gviii INA1_TRIHA : 428- 432: fdwll A--Isg-L aalft ISP5_SCHPO : 317- 322: lalmd Ak-Irg-L phvln ISP5_SCHPO : 451- 456: gacyg Af-Iii-L vfite LYP1_YEAST : 259- 264: svkvl A--ImgyL iyali LYSP_ECOLI : 106- 113: ywynw AvtIavdL vaaql LYSP_ECOLI : 255- 261: lfyvf AilIis-L iipyt LYSP_ECOLI : 331- 338: acdgk AprIfakL srggv LYSP_ECOLI : 423- 428: lgpif Af-Ilc-L iitlg LYSP_ECOLI : 451- 458: wggva AtyIgipL fliiw PAP1_YEAST : 443- 448: aftwl Aa-Iag-L selft PAP1_YEAST : 444- 448: ftwla A--Iag-L selft PHEP_ECOLI : 36- 41: ialgg A--IgtgL flgig PHEP_ECOLI : 63- 69: lgygv AgiIaf-L imrql PHEP_ECOLI : 63- 69: lgygv Ag-IiafL imrql PHEP_ECOLI : 67- 74: vagii AflImrqL gemvv PHEP_ECOLI : 165- 170: tefwf Al-Ikv-L aiigm PHEP_ECOLI : 192- 197: hggek As-Idn-L wrygg PHEP_ECOLI : 350- 354: lmlsg A--Its-L vvlin PROY_SALTY : 45- 50: malgs A--IgtgL fygsa PROY_SALTY : 76- 83: iggva AyiImraL gemsv PUT4_YEAST : 123- 128: ialgg A--IgtgL lvgts PUT4_YEAST : 258- 263: sefwf As-Iki-L civgl PUT4_YEAST : 400- 405: igiqn Ag-Ikv-L phiin PUTX_EMENI : 195- 199: glkil A--Iig-L iilgv PUTX_EMENI : 327- 331: spfvv A--Ikt-L vlegs PUTX_EMENI : 513- 518: syivf A--IflaL yaghk ROCC_BACSU : 49- 56: lgaia AyiIggfL mylvm ROCE_BACSU : 109- 113: wavtc A--Ief-L sagql TAT2_YEAST : 436- 440: fnwlm A--Iag-L atciv TAT2_YEAST : 441- 447: aiagl AtcIvw-L sinls TAT2_YEAST : 485- 490: gsays Al-Inc-L iliaq UGA4_YEAST : 83- 89: qvfgi AfsImg-L lpsia UGA4_YEAST : 83- 90: qvfgi AfsImglL psias UGA4_YEAST : 222- 226: cvasg A--Iar-L qtlsi UGA4_YEAST : 353- 360: ygfal AqiIydsL gkkwa VAL1_YEAST : 453- 457: ftwll A--Iss-L sqlfi VAL1_YEAST : 505- 509: lavli A--Iff-L vcqfw YBR8_YEAST : 128- 135: yggpa AliIgyiL vsfet YBR8_YEAST : 458- 463: vftwl Aa-Iag-L selft YBR8_YEAST : 459- 463: ftwla A--Iag-L selft YBY2_YEAST : 109- 114: talfv A--IgkaL yrggp YBY2_YEAST : 506- 510: gqpyt A--Iig-L vscsa YCC5_YEAST : 363- 368: lflfl At-Iil-L gflvp YCC5_YEAST : 484- 488: ftwll A--Isg-L sqlft YCC5_YEAST : 532- 538: wgsay Ac-ImmiL iliaq YCC5_YEAST : 567- 574: fenyl AmpIliaL yvgyk YEEF_ECOLI : 60- 65: tayaf Al-Iai-L ftals YEEF_ECOLI : 111- 117: ldylf ApmIni-L lakiy YEEF_ECOLI : 111- 118: ldylf ApmInilL akiyf YEEF_ECOLI : 347- 351: iilvg A--Ial-L ainfd YEEF_ECOLI : 352- 357: aiall A--InfdL vmata YEEF_KLEPN : 90- 94: vllvx A--Ial-L aikld YEEF_KLEPN : 95- 100: aiall A--IkldL vtata YFF5_YEAST : 176- 182: lifwf AfeIfq-L vgvgl YFF5_YEAST : 344- 349: itcis A--IngsL yigsr YFF5_YEAST : 459- 466: pvlsl AanIflaL iqgws YFF5_YEAST : 460- 466: vlsla An-IflaL iqgws YIFK_ECOLI : 48- 54: psvll AyiIag-L fvffi YIFK_ECOLI : 48- 54: psvll Ay-IiagL fvffi YIFK_ECOLI : 123- 129: wfpem AqwIpa-L iaval YIFK_ECOLI : 128- 134: aqwip Al-IavaL valan YIFK_ECOLI : 337- 343: pvagv AvsIai-L liaha YIFK_ECOLI : 337- 344: pvagv AvsIailL iahaw YIFK_ECOLI : 412- 418: nyvtm AflIcv-L igmyf YIFK_SALTY : 48- 54: psvll AyiIag-L fvffi YIFK_SALTY : 48- 54: psvll Ay-IiagL fvffi YIFK_SALTY : 123- 129: wfpem AqwIpa-L iavgl YIFK_SALTY : 128- 134: aqwip Al-IavgL valan YIFK_SALTY : 337- 343: pvagv AlsIli-L lvgsc YIFK_SALTY : 337- 344: pvagv AlsIlilL vgscl YKR4_YEAST : 438- 445: lclcs AtfIplvL vlftr YPEV_LACDL : 56- 60: vifiy A--Img-L ffffl YPEV_LACDL : 166- 170: mikii A--Iis-L vvtgi M 13: 11.0102 124( 36) I-x(2,3)-I-x(1,3)-L Occurences: 124(36) ALP1_YEAST : 76- 81: lkqrh Igm-Ia--L ggtig ALP1_YEAST : 90- 97: igtgl Iig-IgppL ahagp ALP1_YEAST : 216- 221: fcias Ikv-Ia--L lgfii ALP1_YEAST : 216- 222: fcias Ikv-Ial-L gfiif ALP1_YEAST : 490- 495: yasff Ial-Iv--L iqgft ANSP_SALTY : 40- 48: vqmia IggaIgtgL flgag ANSP_SALTY : 261- 266: ainsv Iwr-Ig--L fyvgs ANSP_SALTY : 306- 312: pyigs Imn-Ivv-L taals AROP_ECOLI : 20- 25: lknrh Iql-Ia--L ggsig AROP_ECOLI : 54- 61: ilgya IagfIaf-L imrql AROP_ECOLI : 58- 66: aiagf IaflImrqL gemvv AROP_ECOLI : 138- 143: vffvv Ina-In--L tnvkv AROP_ECOLI : 247- 253: iyril Ify-Igs-L avlls AROP_ECOLI : 437- 444: ipvwl IvlgIgy-L fkekt CAN1_CANAL : 74- 82: vsmia IggtIgtgL fistg CAN1_YEAST : 93- 98: lkqrh Igm-Ia--L ggtig CAN1_YEAST : 211- 217: sifwv Iit-Imn-L fpvky CTR1_YEAST : 103- 111: iival IsicIgtsL gelss CTR1_YEAST : 257- 263: wkngg Iaf-Ivg-L inpaw CTR1_YEAST : 407- 412: mscaw Itl-Ig--L lylas CTR1_YEAST : 407- 413: mscaw Itl-Igl-L ylass CTR1_YEAST : 425- 432: afqsl ItgcIaf-L llsyi CTR1_YEAST : 425- 433: afqsl ItgcIaflL lsyii CTR1_YEAST : 437- 443: lllsy IipvIc--L lakkr CTR1_YEAST : 437- 444: lllsy IipvIcl-L akkrn CTR1_YEAST : 438- 443: llsyi Ipv-Ic--L lakkr CTR1_YEAST : 438- 444: llsyi Ipv-Icl-L akkrn CYCA_ECOLI : 33- 41: iqlia IggaIgtgL fmgsg CYCA_ECOLI : 169- 175: famik Iva-Ivs-L ivvgl CYCA_ECOLI : 172- 180: ikiva IvslIvvgL vmvam GABP_BACSU : 22- 30: mtmis IagvIgagL fvgsg GABP_BACSU : 130- 135: wltsl Ilt-Iv--L tltnv GABP_BACSU : 130- 137: wltsl Ilt-IvltL tnvys GABP_BACSU : 285- 291: paaaq ImnfIv--L tavls GABP_BACSU : 409- 416: ltylt Iia-IcgiL vsmaf GABP_BACSU : 435- 440: lltgv Itg-Iv--L isylv GABP_BACSU : 438- 444: gvitg Ivl-Isy-L vfrkr GABP_ECOLI : 24- 32: vtmls IagvIgasL fvgss GABP_ECOLI : 163- 169: ckvia IlafIf--L gavai GABP_ECOLI : 411- 418: ltwlv Igf-ItfvL vvmlf GAP1_YEAST : 100- 108: lqmia IggaIgtgL lvgsg GAP1_YEAST : 245- 251: tvvgf IilgIi--L ncggg GAP1_YEAST : 246- 251: vvgfi Ilg-Ii--L ncggg HIP1_YEAST : 245- 250: iigft Ilg-Iv--L scggg HIP1_YEAST : 333- 340: asyvt IltlIgc-L vpsnd HUTM_BACSU : 162- 167: fssvk Ivt-Ii--L fiilg HUTM_BACSU : 165- 171: vkivt IilfIi--L ggaam HUTM_BACSU : 166- 171: kivti Ilf-Ii--L ggaam INA1_TRIHA : 189- 194: lflgv Iii-In--L fgalg INA1_TRIHA : 217- 225: laatv IfmiIafvL vlggg INA1_TRIHA : 302- 308: fwrit Ify-Ilg-L ffvgl INA1_TRIHA : 479- 484: ylglf Icv-Iv--L maqfy ISP5_SCHPO : 144- 150: yplel ItasIc--L qfwin ISP5_SCHPO : 162- 168: nsgiw ItvfIa--L lcfvn ISP5_SCHPO : 162- 169: nsgiw ItvfIal-L cfvnm ISP5_SCHPO : 490- 497: fpvvv Ivf-IahaL itrqk LYP1_YEAST : 115- 120: lkqrh Igm-Ia--L ggtig LYP1_YEAST : 229- 236: aawia IfwvIit-L mnffp LYP1_YEAST : 553- 558: fftsy Isl-Il--L avmfi LYSP_ECOLI : 26- 34: ltmia IggsIgtgL fvasg LYSP_ECOLI : 167- 175: kvttv IvfiIvgvL miigi LYSP_ECOLI : 256- 261: fyvfa Ili-Is--L iipyt LYSP_ECOLI : 421- 428: fplgp IfafIlc-L iitlg LYSP_ECOLI : 425- 432: pifaf IlclIit-L gqnye PAP1_YEAST : 317- 322: rsvyr Ili-Iy--L ltmil PAP1_YEAST : 317- 323: rsvyr Ili-Iyl-L tmili PHEP_ECOLI : 28- 33: lhnrh Iql-Ia--L ggaig PHEP_ECOLI : 66- 74: gvagi IaflImrqL gemvv PHEP_ECOLI : 172- 180: ikvla IigmIgfgL wllfs PHEP_ECOLI : 173- 180: kvlai Igm-IgfgL wllfs PROY_SALTY : 14- 21: ppwff Ivl-IgqkL mesnn PROY_SALTY : 154- 160: lsvvl IicaIn--L msvkv PROY_SALTY : 155- 160: svvli Ica-In--L msvkv PUT4_YEAST : 155- 162: iisav Iyp-ImcaL gemvc PUT4_YEAST : 262- 268: fasik Ilc-Ivg-L iilsf PUT4_YEAST : 265- 271: ikilc IvglIi--L sfilf PUT4_YEAST : 486- 493: nwfsn Ist-IsgfL gwmcg PUT4_YEAST : 559- 565: rvadf IaayIt--L piflv PUT4_YEAST : 563- 569: fiaay ItlpIf--L vlwfg PUT4_YEAST : 563- 571: fiaay ItlpIflvL wfghk PUTX_EMENI : 51- 59: lqlla IggcIgtgL fvgts PUTX_EMENI : 193- 199: faglk IlaiIg--L iilgv PUTX_EMENI : 193- 199: faglk Ila-Iig-L iilgv PUTX_EMENI : 196- 202: lkila IiglIi--L gvvlf PUTX_EMENI : 197- 202: kilai Igl-Ii--L gvvlf PUTX_EMENI : 482- 488: yyvmf Iis-Ilt-L tngya PUTX_EMENI : 510- 516: flvsy IvfaIf--L alyag PUTX_EMENI : 510- 518: flvsy IvfaIflaL yaghk ROCC_BACSU : 136- 142: vfgiv Ifl-Ina-L svrsf ROCC_BACSU : 240- 248: tlpks IrnvIwrtL fffvl ROCE_BACSU : 126- 133: rwfph IdvwIwc-L vfaal ROCE_BACSU : 160- 166: fwfsg IkilIi--L lfiil ROCE_BACSU : 160- 167: fwfsg IkilIil-L fiilg ROCE_BACSU : 162- 167: fsgik Ili-Il--L fiilg ROCE_BACSU : 165- 171: ikili IllfIi--L ggaam TAT2_YEAST : 92- 100: limia IggsIgtgL fvgsg TAT2_YEAST : 127- 134: iagsq IigtIhg-L geitv TAT2_YEAST : 128- 134: agsqi Igt-Ihg-L geitv TAT2_YEAST : 206- 211: ifyav Ivs-In--L fgvrg UGA4_YEAST : 82- 89: lqvfg IafsImg-L lpsia UGA4_YEAST : 82- 90: lqvfg IafsImglL psias UGA4_YEAST : 336- 344: clmac InpdIdsvL dskyg UGA4_YEAST : 521- 528: nyacv IgpgIwi-L agiyy VAL1_YEAST : 134- 139: vlgyg Ias-Im--L yciiq VAL1_YEAST : 325- 331: kvvyr Ill-Iym-L ttilv YBR8_YEAST : 207- 214: fgndk InpdIyi-L ifyvf YBR8_YEAST : 246- 252: ckilm IagfIi--L sivin YBR8_YEAST : 332- 337: rsiyr Ivv-Iy--L ltmil YBR8_YEAST : 332- 338: rsiyr Ivv-Iyl-L tmili YBY2_YEAST : 98- 106: vqlia IsgvIgtaL fvaig YBY2_YEAST : 384- 389: rilpd Ivn-Ia--L itaaf YCC5_YEAST : 354- 360: aakqm Iyr-Ilf-L flati YCC5_YEAST : 408- 414: vvphf InavIl--L svlsm YCC5_YEAST : 534- 540: sayac Imm-Ili-L iaqfw YEEF_ECOLI : 236- 242: daerv IpraIf--L talig YEEF_ECOLI : 293- 300: qvgal IfstItv-L asgma YEEF_ECOLI : 427- 433: mvlgl IwaaIg--L iylac YEEF_ECOLI : 431- 436: liwaa Igl-Iy--L acvtk YEEF_KLEPN : 170- 176: mvlgl IwggIg--L vyxac YFF5_YEAST : 105- 111: svmes IgemIt--L ypsgg YFF5_YEAST : 342- 349: ilitc Isa-IngsL yigsr YIFK_ECOLI : 17- 22: learh Iel-Ia--L ggtig YIFK_ECOLI : 126- 134: emaqw IpalIavaL valan YIFK_ECOLI : 161- 169: ikvtt IivmIvigL gviff YIFK_ECOLI : 162- 169: kvtti Ivm-IvigL gviff YIFK_SALTY : 17- 22: learh Iel-Ia--L ggtig YIFK_SALTY : 126- 134: emaqw IpalIavgL valan YIFK_SALTY : 161- 169: ikvtt IivmIiigL gviff YIFK_SALTY : 162- 169: kvtti IvmiIig-L gviff YIFK_SALTY : 162- 169: kvtti Ivm-IiigL gviff YKR4_YEAST : 221- 227: wiiya Iif-Idi-L llvfh YKR4_YEAST : 221- 228: wiiya Iif-IdilL lvfhk YKR4_YEAST : 222- 228: iiyai IfidIl--L lvfhk YKR4_YEAST : 222- 229: iiyai IfidIll-L vfhkg YKR4_YEAST : 308- 315: afsgv Ifl-IpimL ilpdn YKR4_YEAST : 471- 477: gwfin Ivs-Ivw-L llsmv YKR4_YEAST : 471- 478: gwfin Ivs-IvwlL lsmvs YKR4_YEAST : 508- 514: vyvfc Ilv-Itg-L yfkwg YPEV_LACDL : 28- 36: vqmia IggtIgtgL flgag YPEV_LACDL : 54- 60: psvif Iya-Img-L ffffl YPEV_LACDL : 164- 170: famik IiaiIs--L vvtgi YPEV_LACDL : 164- 170: famik Iia-Iis-L vvtgi YPEV_LACDL : 165- 170: amiki Iai-Is--L vvtgi N 14: 11.0102 121( 36) I-x(2,4)-I-x(2,3)-L Occurences: 121(36) ALP1_YEAST : 90- 97: igtgl Iig--IgppL ahagp ALP1_YEAST : 216- 222: fcias Ikv--Ial-L gfiif ALP1_YEAST : 312- 320: kvvvr IlvfyIls-L ffigl ANSP_SALTY : 40- 48: vqmia Igga-IgtgL flgag ANSP_SALTY : 72- 81: ylicg IfsffIlraL gelvl ANSP_SALTY : 176- 185: fwfal IkvlaIvifL vvgti ANSP_SALTY : 306- 312: pyigs Imn--Ivv-L taals AROP_ECOLI : 54- 61: ilgya Iagf-Iaf-L imrql AROP_ECOLI : 58- 66: aiagf Iafl-ImrqL gemvv AROP_ECOLI : 245- 253: qviyr IlifyIgs-L avlls AROP_ECOLI : 247- 253: iyril Ify--Igs-L avlls AROP_ECOLI : 427- 436: trgmg IwvylIpvwL ivlgi AROP_ECOLI : 437- 444: ipvwl Ivlg-Igy-L fkekt CAN1_CANAL : 74- 82: vsmia Iggt-IgtgL fistg CAN1_YEAST : 211- 217: sifwv Iit--Imn-L fpvky CAN1_YEAST : 233- 242: fwvas IkvlaIigfL iycfc CAN1_YEAST : 328- 336: kvvfr IltfyIgs-L lfigl CAN1_YEAST : 328- 337: kvvfr IltfyIgslL figll CTR1_YEAST : 93- 102: ggpmm IvygiIivaL isici CTR1_YEAST : 103- 111: iival Isic-IgtsL gelss CTR1_YEAST : 257- 263: wkngg Iaf--Ivg-L inpaw CTR1_YEAST : 407- 413: mscaw Itl--Igl-L ylass CTR1_YEAST : 425- 432: afqsl Itgc-Iaf-L llsyi CTR1_YEAST : 425- 433: afqsl Itgc-IaflL lsyii CTR1_YEAST : 437- 444: lllsy Iipv-Icl-L akkrn CTR1_YEAST : 438- 444: llsyi Ipv--Icl-L akkrn CYCA_ECOLI : 33- 41: iqlia Igga-IgtgL fmgsg CYCA_ECOLI : 167- 175: fwfam IkivaIvs-L ivvgl CYCA_ECOLI : 169- 175: famik Iva--Ivs-L ivvgl CYCA_ECOLI : 172- 180: ikiva Ivsl-IvvgL vmvam GABP_BACSU : 22- 30: mtmis Iagv-IgagL fvgsg GABP_BACSU : 130- 137: wltsl Ilt--IvltL tnvys GABP_BACSU : 156- 165: ywfsl IkvvtIiafL ivgfa GABP_BACSU : 409- 416: ltylt Iia--IcgiL vsmaf GABP_BACSU : 438- 444: gvitg Ivl--Isy-L vfrkr GABP_ECOLI : 24- 32: vtmls Iagv-IgasL fvgss GABP_ECOLI : 242- 250: atnsv IwrisIfy-L csifv GABP_ECOLI : 411- 418: ltwlv Igf--ItfvL vvmlf GAP1_YEAST : 100- 108: lqmia Igga-IgtgL lvgsg GAP1_YEAST : 327- 335: qvfwr ItlfyIls-L lmigl GAP1_YEAST : 327- 336: qvfwr ItlfyIlslL migll GAP1_YEAST : 366- 374: pfvia IkthgIkg-L psvvn HIP1_YEAST : 126- 135: paslv IdwviIstcL ftvin HIP1_YEAST : 333- 340: asyvt Iltl-Igc-L vpsnd HIP1_YEAST : 366- 374: plvia IenggIkg-L pslmn HUTM_BACSU : 50- 58: gpggt IlayvIgg-L mmylv HUTM_BACSU : 255- 264: tviff IgavfIlsgL iswkd HUTM_BACSU : 292- 301: pyaad ImnfvIltaL lsvan INA1_TRIHA : 217- 225: laatv Ifmi-IafvL vlggg INA1_TRIHA : 300- 308: qvfwr ItifyIlg-L ffvgl INA1_TRIHA : 302- 308: fwrit Ify--Ilg-L ffvgl ISP5_SCHPO : 162- 169: nsgiw Itvf-Ial-L cfvnm ISP5_SCHPO : 415- 424: fvwls InvsyIiyrL afkkq ISP5_SCHPO : 490- 497: fpvvv Ivf--IahaL itrqk LYP1_YEAST : 229- 236: aawia Ifwv-Iit-L mnffp LYP1_YEAST : 260- 268: vkvla ImgylIya-L iivcg LYP1_YEAST : 350- 358: kvvfr IvlfyIms-L ffigl LYSP_ECOLI : 26- 34: ltmia Iggs-IgtgL fvasg LYSP_ECOLI : 167- 175: kvttv Ivfi-IvgvL miigi LYSP_ECOLI : 421- 428: fplgp Ifaf-Ilc-L iitlg LYSP_ECOLI : 425- 432: pifaf Ilcl-Iit-L gqnye PAP1_YEAST : 317- 323: rsvyr Ili--Iyl-L tmili PHEP_ECOLI : 65- 74: ygvag IiaflImrqL gemvv PHEP_ECOLI : 66- 74: gvagi Iafl-ImrqL gemvv PHEP_ECOLI : 172- 180: ikvla Iigm-IgfgL wllfs PHEP_ECOLI : 173- 180: kvlai Igm--IgfgL wllfs PHEP_ECOLI : 253- 261: qvvyr IllfyIgs-L vvlla PROY_SALTY : 14- 21: ppwff Ivl--IgqkL mesnn PUT4_YEAST : 155- 162: iisav Iyp--ImcaL gemvc PUT4_YEAST : 260- 268: fwfas IkilcIvg-L iilsf PUT4_YEAST : 262- 268: fasik Ilc--Ivg-L iilsf PUT4_YEAST : 397- 405: pfvig IqnagIkv-L phiin PUT4_YEAST : 486- 493: nwfsn Ist--IsgfL gwmcg PUT4_YEAST : 563- 571: fiaay Itlp-IflvL wfghk PUTX_EMENI : 51- 59: lqlla Iggc-IgtgL fvgts PUTX_EMENI : 193- 199: faglk Ila--Iig-L iilgv PUTX_EMENI : 482- 488: yyvmf Iis--Ilt-L tngya PUTX_EMENI : 510- 518: flvsy Ivfa-IflaL yaghk ROCC_BACSU : 47- 56: gplga IaayiIggfL mylvm ROCC_BACSU : 134- 142: clvfg IviflIna-L svrsf ROCC_BACSU : 136- 142: vfgiv Ifl--Ina-L svrsf ROCC_BACSU : 240- 248: tlpks Irnv-IwrtL fffvl ROCE_BACSU : 126- 133: rwfph Idvw-Iwc-L vfaal ROCE_BACSU : 160- 167: fwfsg Ikil-Iil-L fiilg ROCE_BACSU : 291- 300: pyaad ImnfvIliaL lsvan TAT2_YEAST : 92- 100: limia Iggs-IgtgL fvgsg TAT2_YEAST : 127- 134: iagsq Iigt-Ihg-L geitv TAT2_YEAST : 128- 134: agsqi Igt--Ihg-L geitv TAT2_YEAST : 348- 356: pfvia IklhhIka-L psivn TAT2_YEAST : 449- 458: ivwls InlshIrfrL amkaq UGA4_YEAST : 82- 89: lqvfg Iafs-Img-L lpsia UGA4_YEAST : 82- 90: lqvfg Iafs-ImglL psias UGA4_YEAST : 318- 327: giiss IavcwIlgwL iiicl UGA4_YEAST : 323- 332: iavcw IlgwlIiicL macin UGA4_YEAST : 336- 344: clmac Inpd-IdsvL dskyg UGA4_YEAST : 521- 528: nyacv Igpg-Iwi-L agiyy VAL1_YEAST : 325- 331: kvvyr Ill--Iym-L ttilv YBR8_YEAST : 207- 214: fgndk Inpd-Iyi-L ifyvf YBR8_YEAST : 332- 338: rsiyr Ivv--Iyl-L tmili YBY2_YEAST : 98- 106: vqlia Isgv-IgtaL fvaig YCC5_YEAST : 354- 360: aakqm Iyr--Ilf-L flati YCC5_YEAST : 534- 540: sayac Imm--Ili-L iaqfw YEEF_ECOLI : 293- 300: qvgal Ifst-Itv-L asgma YEEF_ECOLI : 343- 351: pamni IlvgaIal-L ainfd YEEF_ECOLI : 348- 357: ilvga IallaInfdL vmata YEEF_KLEPN : 91- 100: llvxa IallaIkldL vtata YFF5_YEAST : 342- 349: ilitc Isa--IngsL yigsr YIFK_ECOLI : 126- 134: emaqw Ipal-IavaL valan YIFK_ECOLI : 161- 169: ikvtt Iivm-IvigL gviff YIFK_ECOLI : 162- 169: kvtti Ivm--IvigL gviff YIFK_SALTY : 126- 134: emaqw Ipal-IavgL valan YIFK_SALTY : 161- 169: ikvtt IivmiIig-L gviff YIFK_SALTY : 161- 169: ikvtt Iivm-IiigL gviff YIFK_SALTY : 162- 169: kvtti Ivmi-Iig-L gviff YIFK_SALTY : 162- 169: kvtti Ivm--IiigL gviff YKR4_YEAST : 181- 190: seahl IfytvIvfyL vvtvv YKR4_YEAST : 221- 227: wiiya Iif--Idi-L llvfh YKR4_YEAST : 221- 229: wiiya IifidIll-L vfhkg YKR4_YEAST : 221- 228: wiiya Iif--IdilL lvfhk YKR4_YEAST : 222- 229: iiyai Ifid-Ill-L vfhkg YKR4_YEAST : 308- 315: afsgv Ifl--IpimL ilpdn YKR4_YEAST : 308- 317: afsgv IflipImliL pdndl YKR4_YEAST : 469- 477: kfgwf InivsIvw-L llsmv YKR4_YEAST : 469- 478: kfgwf InivsIvwlL lsmvs YKR4_YEAST : 471- 477: gwfin Ivs--Ivw-L llsmv YKR4_YEAST : 471- 478: gwfin Ivs--IvwlL lsmvs YKR4_YEAST : 508- 514: vyvfc Ilv--Itg-L yfkwg YPEV_LACDL : 28- 36: vqmia Iggt-IgtgL flgag YPEV_LACDL : 52- 60: tgpsv IfiyaImg-L ffffl YPEV_LACDL : 54- 60: psvif Iya--Img-L ffffl YPEV_LACDL : 162- 170: fwfam IkiiaIis-L vvtgi YPEV_LACDL : 164- 170: famik Iia--Iis-L vvtgi O 15: 11.0102 110( 36) I-x(3,4)-I-x(0,2)-L Occurences: 110(36) ALP1_YEAST : 312- 318: kvvvr IlvfyI--L slffi ALP1_YEAST : 312- 320: kvvvr IlvfyIlsL ffigl ANSP_SALTY : 72- 78: ylicg IfsffI--L ralge AROP_ECOLI : 54- 61: ilgya Iagf-IafL imrql AROP_ECOLI : 245- 253: qviyr IlifyIgsL avlls AROP_ECOLI : 372- 379: vsalv InwamIs-L ahmkf AROP_ECOLI : 432- 439: iwvyl IpvwlIv-L gigyl AROP_ECOLI : 437- 444: ipvwl Ivlg-IgyL fkekt CAN1_CANAL : 183- 188: aawis Iffv-I--L tifnf CAN1_YEAST : 328- 336: kvvfr IltfyIgsL lfigl CAN1_YEAST : 377- 383: kvlph IfnavI--L ttiis CTR1_YEAST : 425- 432: afqsl Itgc-IafL llsyi CTR1_YEAST : 437- 443: lllsy Iipv-Ic-L lakkr CTR1_YEAST : 437- 444: lllsy Iipv-IclL akkrn CYCA_ECOLI : 167- 175: fwfam IkivaIvsL ivvgl GABP_BACSU : 285- 291: paaaq Imnf-Iv-L tavls GABP_BACSU : 410- 416: tylti IaicgI--L vsmaf GABP_ECOLI : 112- 117: plean Iaam-I--L hswvp GABP_ECOLI : 163- 169: ckvia Ilaf-If-L gavai GABP_ECOLI : 242- 250: atnsv IwrisIfyL csifv GABP_ECOLI : 288- 294: phakl ImdcvI--L lsvts GABP_ECOLI : 288- 295: phakl ImdcvIl-L svtsc GAP1_YEAST : 245- 251: tvvgf IilgiI--L ncggg GAP1_YEAST : 245- 251: tvvgf Iilg-Ii-L ncggg GAP1_YEAST : 246- 251: vvgfi Ilgi-I--L ncggg GAP1_YEAST : 327- 333: qvfwr ItlfyI--L sllmi GAP1_YEAST : 327- 335: qvfwr ItlfyIlsL lmigl GAP1_YEAST : 366- 374: pfvia IkthgIkgL psvvn HIP1_YEAST : 209- 216: dawva IfyatIa-L anmld HIP1_YEAST : 240- 246: ikils IigftI--L givls HIP1_YEAST : 241- 246: kilsi Igft-I--L givls HIP1_YEAST : 333- 340: asyvt Iltl-IgcL vpsnd HIP1_YEAST : 366- 374: plvia IenggIkgL pslmn HUTM_BACSU : 50- 58: gpggt IlayvIggL mmylv HUTM_BACSU : 162- 167: fssvk Ivti-I--L fiilg HUTM_BACSU : 165- 171: vkivt IilfiI--L ggaam HUTM_BACSU : 165- 171: vkivt Iilf-Ii-L ggaam HUTM_BACSU : 166- 171: kivti Ilfi-I--L ggaam HUTM_BACSU : 255- 261: tviff IgavfI--L sglis HUTM_BACSU : 292- 298: pyaad ImnfvI--L talls INA1_TRIHA : 300- 306: qvfwr ItifyI--L glffv INA1_TRIHA : 300- 308: qvfwr ItifyIlgL ffvgl ISP5_SCHPO : 144- 150: yplel Itas-Ic-L qfwin ISP5_SCHPO : 162- 168: nsgiw Itvf-Ia-L lcfvn ISP5_SCHPO : 162- 169: nsgiw Itvf-IalL cfvnm LYP1_YEAST : 229- 236: aawia IfwviIt-L mnffp LYP1_YEAST : 229- 236: aawia Ifwv-IitL mnffp LYP1_YEAST : 260- 268: vkvla ImgylIyaL iivcg LYP1_YEAST : 350- 358: kvvfr IvlfyImsL ffigl LYSP_ECOLI : 421- 426: fplgp Ifaf-I--L cliit LYSP_ECOLI : 421- 428: fplgp Ifaf-IlcL iitlg LYSP_ECOLI : 425- 432: pifaf IlcliIt-L gqnye LYSP_ECOLI : 425- 432: pifaf Ilcl-IitL gqnye PAP1_YEAST : 367- 373: rviph IinavI--L isvis PAP1_YEAST : 368- 373: viphi Inav-I--L isvis PHEP_ECOLI : 253- 261: qvvyr IllfyIgsL vvlla PROY_SALTY : 154- 160: lsvvl Iica-In-L msvkv PUT4_YEAST : 260- 268: fwfas IkilcIvgL iilsf PUT4_YEAST : 265- 271: ikilc IvgliI--L sfilf PUT4_YEAST : 265- 271: ikilc Ivgl-Ii-L sfilf PUT4_YEAST : 269- 275: civgl IilsfI--L fwggg PUT4_YEAST : 270- 275: ivgli Ilsf-I--L fwggg PUT4_YEAST : 397- 405: pfvig IqnagIkvL phiin PUT4_YEAST : 408- 414: kvlph IingcI--L tsaws PUT4_YEAST : 409- 414: vlphi Ingc-I--L tsaws PUT4_YEAST : 559- 565: rvadf Iaay-It-L piflv PUT4_YEAST : 563- 569: fiaay Itlp-If-L vlwfg PUTX_EMENI : 193- 199: faglk Ilai-Ig-L iilgv PUTX_EMENI : 196- 202: lkila IigliI--L gvvlf PUTX_EMENI : 196- 202: lkila Iigl-Ii-L gvvlf PUTX_EMENI : 197- 202: kilai Igli-I--L gvvlf PUTX_EMENI : 510- 516: flvsy Ivfa-If-L alyag ROCC_BACSU : 134- 142: clvfg IviflInaL svrsf ROCC_BACSU : 157- 164: fwfss IkvaaIi-L fivig ROCC_BACSU : 289- 295: pfsad ImnfvI--L tails ROCC_BACSU : 294- 299: imnfv Ilta-I--L svans ROCC_BACSU : 428- 435: islif IpdqrIg-L ycgvp ROCE_BACSU : 126- 133: rwfph Idvw-IwcL vfaal ROCE_BACSU : 160- 166: fwfsg IkiliI--L lfiil ROCE_BACSU : 160- 166: fwfsg Ikil-Ii-L lfiil ROCE_BACSU : 160- 167: fwfsg IkiliIl-L fiilg ROCE_BACSU : 160- 167: fwfsg Ikil-IilL fiilg ROCE_BACSU : 164- 171: gikil IillfIi-L ggaam ROCE_BACSU : 165- 171: ikili IllfiI--L ggaam ROCE_BACSU : 165- 171: ikili Illf-Ii-L ggaam ROCE_BACSU : 291- 297: pyaad ImnfvI--L ialls TAT2_YEAST : 127- 134: iagsq Iigt-IhgL geitv TAT2_YEAST : 348- 356: pfvia IklhhIkaL psivn TAT2_YEAST : 359- 365: kalps IvnavI--L isvls TAT2_YEAST : 444- 451: glatc IvwlsIn-L shirf TAT2_YEAST : 487- 492: aysal Incl-I--L iaqfy UGA4_YEAST : 82- 89: lqvfg Iafs-ImgL lpsia UGA4_YEAST : 238- 245: anlfi IvllfIa-L pigtk UGA4_YEAST : 318- 324: giiss IavcwI--L gwlii UGA4_YEAST : 521- 528: nyacv Igpg-IwiL agiyy VAL1_YEAST : 245- 250: kilmv Igfv-I--L aiiin VAL1_YEAST : 377- 382: vvphf Inav-I--L isvis VAL1_YEAST : 559- 566: swsfw IpaekId-L dshrn YBR8_YEAST : 130- 135: gpaal Iigy-I--L vsfet YBR8_YEAST : 207- 214: fgndk Inpd-IyiL ifyvf YBR8_YEAST : 246- 252: ckilm IagfiI--L sivin YBR8_YEAST : 246- 252: ckilm Iagf-Ii-L sivin YBR8_YEAST : 382- 388: kivph IinavI--L isvvs YBR8_YEAST : 383- 388: ivphi Inav-I--L isvvs YBY2_YEAST : 431- 438: rhgvp IysvaIs-L vwalv YCC5_YEAST : 160- 165: ligya Imgs-I--L yciiq YCC5_YEAST : 408- 413: vvphf Inav-I--L lsvls YCC5_YEAST : 408- 414: vvphf Inav-Il-L svlsm YCC5_YEAST : 534- 540: sayac ImmilI--L iaqfw YCC5_YEAST : 589- 596: dwklf IradkId-L dshrq YEEF_ECOLI : 206- 212: hvipm ItgatI--L cfsft YEEF_ECOLI : 236- 242: daerv Ipra-If-L talig YEEF_ECOLI : 293- 300: qvgal Ifst-ItvL asgma YEEF_ECOLI : 343- 350: pamni IlvgaIa-L lainf YEEF_ECOLI : 343- 351: pamni IlvgaIalL ainfd YEEF_ECOLI : 427- 433: mvlgl Iwaa-Ig-L iylac YEEF_KLEPN : 91- 98: llvxa IallaIk-L dlvta YEEF_KLEPN : 170- 176: mvlgl Iwgg-Ig-L vyxac YFF5_YEAST : 105- 111: svmes Igem-It-L ypsgg YIFK_ECOLI : 162- 169: kvtti IvmivIg-L gviff YIFK_SALTY : 161- 169: ikvtt IivmiIigL gviff YIFK_SALTY : 162- 169: kvtti IvmiiIg-L gviff YIFK_SALTY : 162- 169: kvtti Ivmi-IigL gviff YKR4_YEAST : 221- 227: wiiya IifidI--L llvfh YKR4_YEAST : 221- 228: wiiya IifidIl-L lvfhk YKR4_YEAST : 221- 229: wiiya IifidIllL vfhkg YKR4_YEAST : 222- 227: iiyai Ifid-I--L llvfh YKR4_YEAST : 222- 228: iiyai Ifid-Il-L lvfhk YKR4_YEAST : 222- 229: iiyai Ifid-IllL vfhkg YKR4_YEAST : 308- 315: afsgv IflipIm-L ilpdn YKR4_YEAST : 311- 317: gvifl IpimlI--L pdndl YKR4_YEAST : 469- 477: kfgwf InivsIvwL llsmv YPEV_LACDL : 52- 60: tgpsv IfiyaImgL ffffl YPEV_LACDL : 162- 170: fwfam IkiiaIisL vvtgi YPEV_LACDL : 164- 170: famik Iiai-Is-L vvtgi P 16: 11.0102 118( 36) I-x(3,5)-I-x(0,1)-L Occurences: 118(36) ALP1_YEAST : 213- 221: efefc IasikvIaL lgfii ALP1_YEAST : 312- 318: kvvvr Ilvfy-I-L slffi ALP1_YEAST : 317- 325: ilvfy IlslffIgL lvpyn ANSP_SALTY : 72- 78: ylicg Ifsff-I-L ralge AROP_ECOLI : 372- 379: vsalv Inwam-IsL ahmkf AROP_ECOLI : 432- 439: iwvyl Ipvwl-IvL gigyl CAN1_CANAL : 181- 188: plaaw IsiffvI-L tifnf CAN1_CANAL : 183- 188: aawis Iffv--I-L tifnf CAN1_CANAL : 367- 374: agnsn IysgsrI-L yglaq CAN1_YEAST : 102- 110: alggt IgtglfIgL stplt CAN1_YEAST : 333- 341: iltfy IgsllfIgL lvpyn CAN1_YEAST : 377- 383: kvlph Ifnav-I-L ttiis CAN1_YEAST : 394- 401: aansn IyvgsrI-L fglsk CTR1_YEAST : 346- 353: nksga IflgclI-L ftsfg CTR1_YEAST : 437- 443: lllsy Iipv--IcL lakkr CYCA_ECOLI : 375- 382: gaftm IttvsaI-L fmfvw GABP_BACSU : 285- 291: paaaq Imnf--IvL tavls GABP_BACSU : 409- 416: ltylt IiaicgI-L vsmaf GABP_BACSU : 410- 416: tylti Iaicg-I-L vsmaf GABP_ECOLI : 112- 117: plean Iaam--I-L hswvp GABP_ECOLI : 161- 169: alckv IailafIfL gavai GABP_ECOLI : 163- 169: ckvia Ilaf--IfL gavai GABP_ECOLI : 288- 294: phakl Imdcv-I-L lsvts GABP_ECOLI : 288- 295: phakl Imdcv-IlL svtsc GABP_ECOLI : 364- 372: vfkfl IdssgaIaL lvylv GAP1_YEAST : 239- 247: sfikv ItvvgfIiL giiln GAP1_YEAST : 245- 251: tvvgf Iilgi-I-L ncggg GAP1_YEAST : 245- 251: tvvgf Iilg--IiL ncggg GAP1_YEAST : 246- 251: vvgfi Ilgi--I-L ncggg GAP1_YEAST : 327- 333: qvfwr Itlfy-I-L sllmi GAP1_YEAST : 332- 340: itlfy IlsllmIgL lvpyn HIP1_YEAST : 209- 216: dawva Ifyat-IaL anmld HIP1_YEAST : 240- 246: ikils Iigft-I-L givls HIP1_YEAST : 241- 246: kilsi Igft--I-L givls HIP1_YEAST : 461- 469: sglst IfcwmaInL shirf HUTM_BACSU : 162- 167: fssvk Ivti--I-L fiilg HUTM_BACSU : 165- 171: vkivt Iilfi-I-L ggaam HUTM_BACSU : 165- 171: vkivt Iilf--IiL ggaam HUTM_BACSU : 166- 171: kivti Ilfi--I-L ggaam HUTM_BACSU : 255- 261: tviff Igavf-I-L sglis HUTM_BACSU : 292- 298: pyaad Imnfv-I-L talls INA1_TRIHA : 176- 184: ywnse IttaawIsL flgvi INA1_TRIHA : 300- 306: qvfwr Itify-I-L glffv ISP5_SCHPO : 144- 150: yplel Itas--IcL qfwin ISP5_SCHPO : 160- 168: ninsg IwitvfIaL lcfvn ISP5_SCHPO : 162- 168: nsgiw Itvf--IaL lcfvn LYP1_YEAST : 229- 236: aawia Ifwvi-ItL mnffp LYP1_YEAST : 355- 363: ivlfy ImslffIgL lvpyn LYSP_ECOLI : 421- 426: fplgp Ifaf--I-L cliit LYSP_ECOLI : 425- 432: pifaf Ilcli-ItL gqnye PAP1_YEAST : 222- 229: getef IfnsckI-L mvagf PAP1_YEAST : 320- 327: yrili IylltmI-L igfnv PAP1_YEAST : 367- 373: rviph Iinav-I-L isvis PAP1_YEAST : 368- 373: viphi Inav--I-L isvis PHEP_ECOLI : 418- 425: gnylc IaflgmI-L llmct PHEP_ECOLI : 418- 426: gnylc IaflgmIlL lmctm PROY_SALTY : 154- 160: lsvvl Iica--InL msvkv PUT4_YEAST : 265- 271: ikilc Ivgli-I-L sfilf PUT4_YEAST : 265- 271: ikilc Ivgl--IiL sfilf PUT4_YEAST : 269- 275: civgl Iilsf-I-L fwggg PUT4_YEAST : 270- 275: ivgli Ilsf--I-L fwggg PUT4_YEAST : 408- 414: kvlph Iingc-I-L tsaws PUT4_YEAST : 409- 414: vlphi Ingc--I-L tsaws PUT4_YEAST : 559- 565: rvadf Iaay--ItL piflv PUT4_YEAST : 563- 569: fiaay Itlp--IfL vlwfg PUTX_EMENI : 193- 199: faglk Ilai--IgL iilgv PUTX_EMENI : 196- 202: lkila Iigli-I-L gvvlf PUTX_EMENI : 196- 202: lkila Iigl--IiL gvvlf PUTX_EMENI : 197- 202: kilai Igli--I-L gvvlf PUTX_EMENI : 510- 516: flvsy Ivfa--IfL alyag ROCC_BACSU : 157- 164: fwfss IkvaaiI-L fivig ROCC_BACSU : 157- 164: fwfss Ikvaa-IiL fivig ROCC_BACSU : 289- 295: pfsad Imnfv-I-L tails ROCC_BACSU : 294- 299: imnfv Ilta--I-L svans ROCC_BACSU : 428- 435: islif Ipdqr-IgL ycgvp ROCE_BACSU : 160- 166: fwfsg Ikili-I-L lfiil ROCE_BACSU : 160- 166: fwfsg Ikil--IiL lfiil ROCE_BACSU : 160- 167: fwfsg Ikili-IlL fiilg ROCE_BACSU : 164- 171: gikil IillfiI-L ggaam ROCE_BACSU : 164- 171: gikil Iillf-IiL ggaam ROCE_BACSU : 165- 171: ikili Illfi-I-L ggaam ROCE_BACSU : 165- 171: ikili Illf--IiL ggaam ROCE_BACSU : 291- 297: pyaad Imnfv-I-L ialls TAT2_YEAST : 230- 238: stika ItvcgfIiL cvvli TAT2_YEAST : 311- 319: qvfwr IlffflIsL tlvgf TAT2_YEAST : 359- 365: kalps Ivnav-I-L isvls TAT2_YEAST : 444- 451: glatc Ivwls-InL shirf TAT2_YEAST : 487- 492: aysal Incl--I-L iaqfy UGA4_YEAST : 237- 245: fanlf IivllfIaL pigtk UGA4_YEAST : 238- 245: anlfi Ivllf-IaL pigtk UGA4_YEAST : 318- 324: giiss Iavcw-I-L gwlii UGA4_YEAST : 521- 528: nyacv IgpgiwI-L agiyy VAL1_YEAST : 235- 242: aeaef IfnsckI-L mvigf VAL1_YEAST : 245- 250: kilmv Igfv--I-L aiiin VAL1_YEAST : 328- 335: yrill IymlttI-L vcflv VAL1_YEAST : 377- 382: vvphf Inav--I-L isvis VAL1_YEAST : 559- 566: swsfw Ipaek-IdL dshrn YBR8_YEAST : 130- 135: gpaal Iigy--I-L vsfet YBR8_YEAST : 207- 214: fgndk InpdiyI-L ifyvf YBR8_YEAST : 237- 244: getef IfncckI-L miagf YBR8_YEAST : 246- 252: ckilm Iagfi-I-L sivin YBR8_YEAST : 246- 252: ckilm Iagf--IiL sivin YBR8_YEAST : 329- 337: aakrs IyrivvIyL ltmil YBR8_YEAST : 335- 342: yrivv IylltmI-L igfnv YBR8_YEAST : 382- 388: kivph Iinav-I-L isvvs YBR8_YEAST : 383- 388: ivphi Inav--I-L isvvs YBY2_YEAST : 431- 438: rhgvp Iysva-IsL vwalv YCC5_YEAST : 160- 165: ligya Imgs--I-L yciiq YCC5_YEAST : 408- 413: vvphf Inav--I-L lsvls YCC5_YEAST : 408- 414: vvphf Inav--IlL svlsm YCC5_YEAST : 534- 540: sayac Immil-I-L iaqfw YCC5_YEAST : 589- 596: dwklf Iradk-IdL dshrq YEEF_ECOLI : 206- 212: hvipm Itgat-I-L cfsft YEEF_ECOLI : 236- 242: daerv Ipra--IfL talig YEEF_ECOLI : 342- 350: tpamn IilvgaIaL lainf YEEF_ECOLI : 343- 350: pamni Ilvga-IaL lainf YEEF_ECOLI : 427- 433: mvlgl Iwaa--IgL iylac YEEF_KLEPN : 91- 98: llvxa Ialla-IkL dlvta YEEF_KLEPN : 170- 176: mvlgl Iwgg--IgL vyxac YFF5_YEAST : 105- 111: svmes Igem--ItL ypsgg YFF5_YEAST : 486- 493: fvday IllpvgI-L lyigi YFF5_YEAST : 486- 494: fvday IllpvgIlL yigic YIFK_ECOLI : 161- 169: ikvtt IivmivIgL gviff YIFK_ECOLI : 162- 169: kvtti Ivmiv-IgL gviff YIFK_SALTY : 161- 169: ikvtt IivmiiIgL gviff YIFK_SALTY : 162- 169: kvtti Ivmii-IgL gviff YKR4_YEAST : 221- 227: wiiya Iifid-I-L llvfh YKR4_YEAST : 221- 228: wiiya Iifid-IlL lvfhk YKR4_YEAST : 222- 227: iiyai Ifid--I-L llvfh YKR4_YEAST : 222- 228: iiyai Ifid--IlL lvfhk YKR4_YEAST : 308- 315: afsgv Iflip-ImL ilpdn YKR4_YEAST : 311- 317: gvifl Ipiml-I-L pdndl YPEV_LACDL : 162- 170: fwfam IkiiaiIsL vvtgi YPEV_LACDL : 164- 170: famik Iiai--IsL vvtgi Q 17: 11.0102 105( 36) A-x(0,2)-I-x(3,4)-I Occurences: 105(36) ALP1_YEAST : 461- 467: irfmq A--IrkrgI srddl ANSP_SALTY : 39- 44: qvqmi A--Igga-I gtglf ANSP_SALTY : 174- 181: mefwf Al-IkvlaI viflv ANSP_SALTY : 256- 261: kmvpk A--Insv-I wrigl AROP_ECOLI : 53- 58: iilgy A--Iagf-I aflim AROP_ECOLI : 55- 62: lgyai AgfIafl-I mrqlg AROP_ECOLI : 157- 162: mefwf A--Iikv-I avvam AROP_ECOLI : 369- 377: alvvs AlvInwamI slahm CAN1_CANAL : 73- 78: hvsmi A--Iggt-I gtglf CAN1_CANAL : 353- 359: phifn Av-Ivtt-I isagn CAN1_CANAL : 353- 360: phifn Av-IvttiI sagns CAN1_CANAL : 432- 440: nitat AglIswgfI svshi CAN1_YEAST : 231- 238: fefwv As-IkvlaI igfli CAN1_YEAST : 237- 243: sikvl Ai-Igfl-I ycfcm CAN1_YEAST : 237- 243: sikvl A--IigflI ycfcm CAN1_YEAST : 380- 386: phifn Av-Iltt-I isaan CAN1_YEAST : 380- 387: phifn Av-IlttiI saans CAN1_YEAST : 539- 547: iflfl AvwIlfqcI frcrf CTR1_YEAST : 101- 107: giiiv Al-Isic-I gtslg CTR1_YEAST : 258- 264: knggi Af-Ivgl-I npaws CYCA_ECOLI : 32- 37: hiqli A--Igga-I gtglf CYCA_ECOLI : 165- 172: mefwf Am-IkivaI vsliv CYCA_ECOLI : 171- 176: mikiv A--Ivsl-I vvglv CYCA_ECOLI : 248- 254: kslpr A--InsipI riimf GABP_BACSU : 108- 114: viaie A--IagagI iqywf GABP_BACSU : 282- 289: igvpa AaqImnf-I vltav GABP_BACSU : 283- 289: gvpaa Aq-Imnf-I vltav GABP_ECOLI : 110- 116: viple An-Iaam-I lhswv GABP_ECOLI : 162- 167: lckvi A--Ilaf-I flgav GABP_ECOLI : 285- 293: lniph AklImdcvI llsvt GAP1_YEAST : 99- 104: hlqmi A--Igga-I gtgll GAP1_YEAST : 365- 371: spfvi A--IkthgI kglps HIP1_YEAST : 208- 214: sdawv A--IfyatI alanm HIP1_YEAST : 365- 371: splvi A--IenggI kglps HIP1_YEAST : 466- 472: ifcwm A--InlshI rfrqa HUTM_BACSU : 257- 265: iffig AvfIlsglI swkda HUTM_BACSU : 289- 297: igipy AadImnfvI ltall HUTM_BACSU : 290- 297: gipya Ad-ImnfvI ltall INA1_TRIHA : 74- 79: hlhmi A--Iggs-I gagff INA1_TRIHA : 214- 221: cfkla AtvIfmi-I afvlv ISP5_SCHPO : 48- 56: krtlt ArhIqmigI ggaig ISP5_SCHPO : 451- 459: gacyg AfiIilvfI tefyv LYP1_YEAST : 147- 154: vgsli Ay-IfmgtI vyfvt LYP1_YEAST : 228- 233: laawi A--Ifwv-I itlmn LYP1_YEAST : 228- 234: laawi A--IfwviI tlmnf LYP1_YEAST : 259- 265: svkvl A--ImgylI yalii LYSP_ECOLI : 25- 30: hltmi A--Iggs-I gtglf LYSP_ECOLI : 204- 212: faggf AamIgvamI vgfsf LYSP_ECOLI : 205- 212: aggfa Am-IgvamI vgfsf LYSP_ECOLI : 255- 262: lfyvf AilIisl-I ipytd LYSP_ECOLI : 255- 263: lfyvf AilIisliI pytdp LYSP_ECOLI : 423- 429: lgpif Af-Ilcl-I itlgq LYSP_ECOLI : 423- 430: lgpif Af-IlcliI tlgqn PAP1_YEAST : 370- 377: phiin Av-IlisvI svans PHEP_ECOLI : 63- 70: lgygv AgiIafl-I mrqlg PHEP_ECOLI : 63- 70: lgygv Ag-IiaflI mrqlg PHEP_ECOLI : 165- 172: tefwf Al-IkvlaI igmig PHEP_ECOLI : 171- 176: likvl A--Iigm-I gfglw PROY_SALTY : 179- 185: sffkv At-Iiim-I vagig PUT4_YEAST : 63- 69: nekdd A--IrmekI sknqs PUT4_YEAST : 258- 265: sefwf As-IkilcI vglii PUT4_YEAST : 556- 563: kywrv AdfIaay-I tlpif PUT4_YEAST : 560- 567: vadfi AayItlp-I flvlw PUT4_YEAST : 561- 567: adfia Ay-Itlp-I flvlw PUTX_EMENI : 50- 55: qlqll A--Iggc-I gtglf PUTX_EMENI : 195- 200: glkil A--Iigl-I ilgvv PUTX_EMENI : 195- 201: glkil Ai-Igli-I lgvvl PUTX_EMENI : 195- 201: glkil A--IigliI lgvvl ROCC_BACSU : 46- 51: agplg A--Iaay-I iggfl ROCC_BACSU : 46- 52: agplg A--IaayiI ggflm ROCC_BACSU : 160- 166: ssikv Aa-Iilf-I vigga ROCC_BACSU : 160- 168: ssikv AaiIlfivI ggaav ROCC_BACSU : 161- 166: sikva A--Iilf-I vigga ROCC_BACSU : 161- 168: sikva Ai-IlfivI ggaav ROCC_BACSU : 287- 294: gipfs Ad-ImnfvI ltail ROCC_BACSU : 338- 345: gvpmn AllItlg-I sgcsl ROCE_BACSU : 288- 296: igipy AadImnfvI liall ROCE_BACSU : 289- 296: gipya Ad-ImnfvI liall TAT2_YEAST : 91- 96: hlimi A--Iggs-I gtglf TAT2_YEAST : 121- 127: vvigw A--IagsqI igtih TAT2_YEAST : 200- 206: pviwv A--IfyavI vsinl TAT2_YEAST : 347- 353: spfvi A--IklhhI kalps TAT2_YEAST : 441- 449: aiagl AtcIvwlsI nlshi TAT2_YEAST : 485- 491: gsays Al-Incl-I liaqf TAT2_YEAST : 523- 529: qnylc Al-Imlf-I fivhk UGA4_YEAST : 116- 124: gwfva AffIllvgI tmaeh UGA4_YEAST : 334- 340: iiclm Ac-Inpd-I dsvld UGA4_YEAST : 518- 525: stmny AcvIgpg-I wilag VAL1_YEAST : 135- 142: lgygi As-ImlycI iqaag VAL1_YEAST : 379- 386: phfin Av-IlisvI svans YBR8_YEAST : 127- 134: hyggp AalIigy-I lvsfe YBR8_YEAST : 128- 134: yggpa Al-Iigy-I lvsfe YBR8_YEAST : 247- 254: kilmi AgfIils-I vincg YBR8_YEAST : 370- 378: spyvl AasIhgvkI vphii YBR8_YEAST : 371- 378: pyvla As-IhgvkI vphii YBY2_YEAST : 97- 102: hvqli A--Isgv-I gtalf YCC5_YEAST : 159- 164: lligy A--Imgs-I lycii YCC5_YEAST : 532- 539: wgsay Ac-ImmilI liaqf YEEF_ECOLI : 244- 250: aiflt Al-Iggm-I fifat YEEF_ECOLI : 291- 297: afqvg Al-Ifst-I tvlas YEEF_ECOLI : 347- 353: iilvg A--IallaI nfdlv YEEF_KLEPN : 90- 96: vllvx A--IallaI kldlv YFF5_YEAST : 335- 342: ahlvn Af-IlitcI saing YFF5_YEAST : 459- 467: pvlsl AanIflalI qgwsy YFF5_YEAST : 460- 467: vlsla An-IflalI qgwsy YIFK_ECOLI : 123- 130: wfpem AqwIpal-I avalv YIFK_ECOLI : 154- 161: iefwf Am-IkvttI ivmiv YIFK_ECOLI : 337- 345: pvagv AvsIaillI ahawn YIFK_ECOLI : 412- 419: nyvtm AflIcvl-I gmyfn YIFK_SALTY : 123- 130: wfpem AqwIpal-I avglv YIFK_SALTY : 154- 161: iefwf Am-IkvttI ivmii YKR4_YEAST : 8- 15: eytll AdnIren-I vhfdp YKR4_YEAST : 178- 186: nlise AhlIfytvI vfylv YKR4_YEAST : 220- 226: ywiiy Ai-Ifid-I lllvf YKR4_YEAST : 220- 226: ywiiy A--IifidI lllvf YKR4_YEAST : 528- 535: frlpl AddIkap-I psdae YPEV_LACDL : 27- 32: hvqmi A--Iggt-I gtglf YPEV_LACDL : 160- 167: tefwf Am-IkiiaI islvv R 18: 11.0102 82( 36) F-x(4,5)-I-x(2,4)-I Occurences: 82(36) ALP1_YEAST : 211- 219: ygefe Fcias-Ikv--I allgf ALP1_YEAST : 445- 456: tgvag FfawllIsfshI rfmqa ALP1_YEAST : 446- 456: gvagf Fawll-IsfshI rfmqa ALP1_YEAST : 488- 496: ayyas Ffial-Ivl--I qgfta ANSP_SALTY : 171- 181: faeme Fwfal-IkvlaI viflv AROP_ECOLI : 154- 162: fgeme Fwfai-Ikv--I avvam CAN1_CANAL : 204- 212: ygeve Fwias-Iki--I avfgw CAN1_CANAL : 261- 269: kyvaa Fvsgl-Ins--I ftfqg CAN1_CANAL : 499- 507: fnasd Fftay-Isv--I lfvvl CAN1_YEAST : 228- 238: ygefe Fwvas-IkvlaI igfli CAN1_YEAST : 461- 472: tgvag FfawlfIsishI rfmqa CAN1_YEAST : 462- 472: gvagf Fawlf-IsishI rfmqa CAN1_YEAST : 537- 547: isifl Flavw-IlfqcI frcrf CAN1_YEAST : 548- 556: lfqci Frcrf-Iwk--I gdvdi CTR1_YEAST : 431- 441: tgcia FlllsyIipv-I cllak CYCA_ECOLI : 162- 172: fgeme Fwfam-IkivaI vsliv CYCA_ECOLI : 164- 172: emefw Famik-Iva--I vsliv GABP_BACSU : 98- 109: gwlyw FfwvivIaieaI agagi GABP_BACSU : 99- 109: wlywf Fwviv-IaieaI agagi GABP_BACSU : 212- 220: vvifs Fmgte-Iva--I aaget GABP_BACSU : 403- 412: mwlfp FltyltIia--I cgilv GABP_ECOLI : 214- 222: itmfs Fmgae-Ivt--I aaaes GAP1_YEAST : 231- 239: ygeae Fvfsf-Ikv--I tvvgf GAP1_YEAST : 462- 472: glssl Ftwgg-IcichI rfrka HIP1_YEAST : 230- 240: fgete Fvlsm-IkilsI igfti HIP1_YEAST : 462- 472: glsti Fcwma-InlshI rfrqa HUTM_BACSU : 157- 165: etefw Fssvk-Ivt--I ilfii HUTM_BACSU : 157- 166: etefw Fssvk-Ivti-I lfiil HUTM_BACSU : 205- 213: lfpng Flavf-Iam--I svsfa HUTM_BACSU : 254- 265: rtvif FigavfIlsglI swkda INA1_TRIHA : 100- 108: gpgsl Fvdfl-Iig--I mmfnv INA1_TRIHA : 297- 305: aikqv Fwrit-Ify--I lglff ISP5_SCHPO : 410- 420: nlatl Fvwls-InvsyI iyrla ISP5_SCHPO : 485- 493: qsylc Fpvvv-Ivf--I ahali LYP1_YEAST : 526- 534: ayyaa Ffvtv-Iif--I qgfqa LYP1_YEAST : 548- 556: fkvse Fftsy-Isl--I llavm LYSP_ECOLI : 251- 259: wrill Fyvfa-Ili--I sliip LYSP_ECOLI : 254- 262: llfyv Faili-Isl--I ipytd LYSP_ECOLI : 254- 263: llfyv Faili-Isli-I pytdp LYSP_ECOLI : 415- 425: pyrsg FfplgpIfaf-I lclii LYSP_ECOLI : 416- 425: yrsgf Fplgp-Ifaf-I lclii PAP1_YEAST : 452- 462: glsel Ftwsg-ImlshI rfrka PHEP_ECOLI : 162- 172: ygete Fwfal-IkvlaI igmig PROY_SALTY : 175- 185: efwfs FfkvatIiim-I vagig PROY_SALTY : 176- 185: fwfsf FkvatiIim--I vagig PROY_SALTY : 176- 185: fwfsf Fkvat-Iiim-I vagig PROY_SALTY : 231- 239: lqmvm Faygg-Iei--I gitag PROY_SALTY : 231- 241: lqmvm Faygg-IeiigI tagea PUT4_YEAST : 145- 155: gpagl FisyiiIsav-I ypimc PUT4_YEAST : 145- 155: gpagl Fisyi-IisavI ypimc PUT4_YEAST : 255- 265: ygese Fwfas-IkilcI vglii PUT4_YEAST : 257- 265: esefw Fasik-Ilc--I vglii PUT4_YEAST : 480- 489: stadv FnwfsnIst--I sgflg PUT4_YEAST : 531- 539: pytvw Fsliv-Igi--I titng PUT4_YEAST : 531- 541: pytvw Fsliv-IgiitI tngya PUT4_YEAST : 558- 567: wrvad Fiaay-Itlp-I flvlw PUTX_EMENI : 188- 196: esefw Faglk-Ila--I iglii PUTX_EMENI : 188- 197: esefw Faglk-Ilai-I gliil PUTX_EMENI : 505- 514: ftasd Flvsy-Ivfa-I flaly ROCC_BACSU : 152- 162: faeme Fwfss-IkvaaI ilfiv ROCE_BACSU : 135- 145: iwclv FaalmfIlna-I ttkaf ROCE_BACSU : 155- 164: faese Fwfsg-Ikil-I illfi ROCE_BACSU : 155- 165: faese Fwfsg-IkiliI llfii ROCE_BACSU : 157- 165: esefw Fsgik-Ili--I llfii ROCE_BACSU : 252- 260: wrtlv Ffvls-Iiv--I agmip TAT2_YEAST : 222- 230: fgeae Fafst-Ika--I tvcgf UGA4_YEAST : 113- 124: lvwgw FvaaffIllvgI tmaeh UGA4_YEAST : 232- 243: qtlsi FanlfiIvllfI alpig UGA4_YEAST : 476- 485: frpgp Fylgk-Iwsp-I vawtg VAL1_YEAST : 236- 245: eaefi Fnsck-Ilmv-I gfvil VAL1_YEAST : 376- 386: kvvph Finav-IlisvI svans YBR8_YEAST : 202- 211: smtiq Fgndk-Inpd-I yilif YBR8_YEAST : 238- 246: etefi Fncck-Ilm--I agfii YBY2_YEAST : 175- 185: swnfw FlecvqIpfe-I vsvnt YCC5_YEAST : 241- 250: vfvii Fyvlv-Itin-I fgarg YEEF_ECOLI : 110- 121: lldyl FapminIllakI yfeal YEEF_ECOLI : 241- 250: iprai Fltal-Iggm-I fifat YEEF_ECOLI : 287- 297: vagka FqvgalIfst-I tvlas YEEF_ECOLI : 374- 385: lvaft FvnlsvIsqfwI rekrn YEEF_KLEPN : 117- 128: lvaft FvnlsvIsqfwI rekrn YFF5_YEAST : 99- 109: igiia FsvmesIgem-I tlyps YFF5_YEAST : 209- 218: vayyi Fsivy-Isgd-I rnrpa YFF5_YEAST : 336- 345: hlvna FilitcIsa--I ngsly YIFK_ECOLI : 151- 161: ygeie Fwfam-IkvttI ivmiv YIFK_ECOLI : 247- 255: wrili Fyvga-Ifv--I vtifp YIFK_SALTY : 151- 161: ygeie Fwfam-IkvttI ivmii YIFK_SALTY : 247- 255: wrili Fyvga-Ifv--I vtifp YKR4_YEAST : 465- 474: kiryk FgwfinIvs--I vwlll YPEV_LACDL : 157- 165: fgete Fwfam-Iki--I aiisl YPEV_LACDL : 157- 167: fgete Fwfam-IkiiaI islvv YPEV_LACDL : 159- 167: etefw Famik-Iia--I islvv YPEV_LACDL : 159- 168: etefw FamikiIai--I slvvt YPEV_LACDL : 159- 168: etefw Famik-Iiai-I slvvt S 19: 11.0102 108( 36) L-x(2,4)-A-x(2,3)-G Occurences: 108(36) ALP1_YEAST : 97- 104: gigpp Lah--AgpvG alisy ALP1_YEAST : 423- 430: gflaf Levs-Ags-G kafnw ANSP_SALTY : 102- 111: yaref LgekaAyvaG wmyfi ANSP_SALTY : 278- 287: vllvl LlpwnAyqaG qspfv ANSP_SALTY : 279- 287: llvll Lpwn-AyqaG qspfv ANSP_SALTY : 382- 388: vfeiv Lnf--Asl-G iiasw ANSP_SALTY : 403- 410: vcqmr Lrq--AikeG kaadv ANSP_SALTY : 460- 467: pliai Llv--AgwfG vrrrv AROP_ECOLI : 50- 56: gpgii Lgy--Aia-G fiafl AROP_ECOLI : 196- 202: dqggf Lph--Aft-G lvmmm AROP_ECOLI : 311- 318: cnsrm Lfgl-Aqq-G napka CAN1_CANAL : 374- 381: sgsri Lygl-Aqa-G vapkf CAN1_CANAL : 425- 433: kaftw LlnitAta-G liswg CAN1_CANAL : 426- 433: aftwl Lnit-Ata-G liswg CAN1_YEAST : 114- 121: glstp Ltn--AgpvG alisy CTR1_YEAST : 370- 379: twqar LcwsfArdnG lplsr CYCA_ECOLI : 322- 329: stsrm Lfgl-Aqe-G vapka CYCA_ECOLI : 448- 456: llvtp Lwfi-AlglG wlfig GABP_BACSU : 165- 174: tiiaf LivgfAfifG fapgs GABP_BACSU : 407- 414: pflty Ltii-Aic-G ilvsm GABP_ECOLI : 22- 29: rhvtm Lsi--AgviG aslfv GABP_ECOLI : 131- 139: iwlfs LvitlAlt-G snlls GABP_ECOLI : 169- 176: lafif Lgav-Ais-G fypya GAP1_YEAST : 95- 102: lknrh Lqmi-Aig-G aigtg HIP1_YEAST : 95- 102: lsvrh Lltl-Avg-G aigtg HIP1_YEAST : 96- 102: svrhl Ltl--Avg-G aigtg HIP1_YEAST : 98- 107: rhllt LavggAigtG lyvnt HIP1_YEAST : 362- 369: aassp Lvi--AienG gikgl HUTM_BACSU : 41- 47: stgyt Lhq--Agp-G gtila HUTM_BACSU : 41- 48: stgyt Lhq--AgpgG tilay HUTM_BACSU : 70- 78: qclge LsvanAvt-G sfqky HUTM_BACSU : 171- 178: ilfii Lgga-Amf-G lisln HUTM_BACSU : 171- 178: ilfii Lgg--AamfG lisln HUTM_BACSU : 301- 308: vilta Llsv-Ans-G lyast HUTM_BACSU : 302- 308: iltal Lsv--Ans-G lyast HUTM_BACSU : 418- 427: mpiaa LllcsAsciG lafdp HUTM_BACSU : 419- 427: piaal Llcs-AsciG lafdp HUTM_BACSU : 420- 427: iaall Lcs--AsciG lafdp INA1_TRIHA : 70- 77: mkarh Lhmi-Aig-G sigag INA1_TRIHA : 338- 347: aspfv LvgkyAglkG fdhfm INA1_TRIHA : 375- 382: ggsrt Ltal-Aqq-G yapkl ISP5_SCHPO : 190- 197: ffvss Lkvm-Amv-G fiicg ISP5_SCHPO : 312- 321: aspfi LalmdAkirG lphvl ISP5_SCHPO : 314- 321: pfila Lmd--AkirG lphvl ISP5_SCHPO : 349- 356: tgsrt Lhsm-Aeq-G hapkw LYP1_YEAST : 136- 143: gistp Lsn--AgpvG sliay LYP1_YEAST : 423- 430: vgsrv Lysl-Art-G napkq LYSP_ECOLI : 21- 28: lkarh Ltmi-Aig-G sigtg LYSP_ECOLI : 322- 329: astrm Lytl-Acd-G kapri PAP1_YEAST : 98- 105: gigtg Llv--AnakG lslag PAP1_YEAST : 106- 112: anakg Lsl--Agp-G slvig PAP1_YEAST : 390- 398: yaapr LmcslAqq-G yapkf PHEP_ECOLI : 33- 40: iqlia Lgg--AigtG lflgi PHEP_ECOLI : 166- 174: efwfa LikvlAii-G migfg PHEP_ECOLI : 416- 422: pfgny Lci--Afl-G milll PROY_SALTY : 42- 49: irfma Lgs--AigtG lfygs PUT4_YEAST : 120- 127: vqlia Lgg--AigtG llvgt PUT4_YEAST : 377- 384: yndpt Lvn--AlaqG kpgag PUT4_YEAST : 432- 439: astrs Lltm-Aqt-G qapkc PUT4_YEAST : 433- 439: strsl Ltm--Aqt-G qapkc PUTX_EMENI : 46- 53: lssrq Lqll-Aig-G cigtg PUTX_EMENI : 191- 198: fwfag Lkil-Aii-G liilg PUTX_EMENI : 363- 370: agsek Lysl-Age-G qapki ROCC_BACSU : 17- 24: mksrh Lfmi-Alg-G vigtg ROCC_BACSU : 44- 53: sqagp LgaiaAyiiG gflmy ROCC_BACSU : 299- 305: iltai Lsv--Ans-G lyaas ROCE_BACSU : 171- 178: llfii Lgga-Amf-G lidlk ROCE_BACSU : 171- 178: llfii Lgg--AamfG lidlk ROCE_BACSU : 300- 307: vilia Llsv-Ans-G lyast ROCE_BACSU : 301- 307: ilial Lsv--Ans-G lyast ROCE_BACSU : 315- 322: astri Lyam-Ane-G qafka ROCE_BACSU : 369- 377: mvlls LagmsAqv-G witis TAT2_YEAST : 87- 94: lkprh Limi-Aig-G sigtg TAT2_YEAST : 383- 390: assrt Lcsm-Ahq-G lipww UGA4_YEAST : 89- 98: fsimg LlpsiAsvmG gglgg UGA4_YEAST : 90- 98: simgl Lpsi-AsvmG gglgg UGA4_YEAST : 240- 248: lfiiv Llfi-AlpiG tkhrm UGA4_YEAST : 241- 248: fiivl Lfi--AlpiG tkhrm UGA4_YEAST : 444- 451: aatda Lfsl-Ava-G nnlaw VAL1_YEAST : 120- 127: gngqv Lgt--AgpaG lvlgy VAL1_YEAST : 149- 158: qaage LglcyAgltG nytry VAL1_YEAST : 151- 158: agelg Lcy--AgltG nytry VAL1_YEAST : 399- 407: ysgpr LllslAeq-G vlpkc VAL1_YEAST : 400- 407: sgprl Llsl-Aeq-G vlpkc VAL1_YEAST : 401- 407: gprll Lsl--Aeq-G vlpkc YBR8_YEAST : 113- 120: gigtg Llv--AnakG lhygg YBR8_YEAST : 405- 413: yagpr LicslAqq-G yapkf YBR8_YEAST : 493- 500: rslde Lgyk-Att-G iwgsi YBY2_YEAST : 389- 397: ivnia Lita-AfsaG nayty YCC5_YEAST : 126- 133: qprhv Lmi--AlgtG igtgl YCC5_YEAST : 146- 153: gngta Lvh--AgpaG lligy YCC5_YEAST : 154- 162: agpag LligyAim-G silyc YCC5_YEAST : 155- 162: gpagl Ligy-Aim-G silyc YCC5_YEAST : 319- 327: gvvat Lvta-AfafG gsefi YEEF_ECOLI : 65- 72: aliai Lft--AlsyG klvrr YEEF_ECOLI : 300- 309: stitv LasgmAahaG varlm YEEF_ECOLI : 402- 411: fqylf LpmcgAltvG alwvn YEEF_ECOLI : 424- 432: essmv LgliwAai-G liyla YEEF_ECOLI : 426- 432: smvlg Liw--Aai-G liyla YEEF_KLEPN : 43- 52: ssvtv LasgtAahaG vsrlm YEEF_KLEPN : 145- 154: fnyli LpvcgAltvG alwin YFF5_YEAST : 356- 363: igsrt Lthl-Ahe-G lapki YIFK_ECOLI : 206- 215: gflta LcivvAsyqG velig YIFK_ECOLI : 273- 279: gspfv Ltf--Aki-G itaaa YIFK_ECOLI : 292- 298: infvv Lta--Als-G cnsgm YIFK_SALTY : 206- 215: gflta LcivvAsyqG velig YIFK_SALTY : 273- 279: gspfv Ltf--Aki-G itaaa YIFK_SALTY : 292- 298: infvv Lta--Als-G cnsgm YKR4_YEAST : 300- 306: msnav Lls--Afs-G vifli YPEV_LACDL : 144- 153: glltl LnltaAklfG etefw YPEV_LACDL : 146- 153: ltlln Lta--AklfG etefw T 20: 11.0102 114( 36) L-x(1,2)-L-x(0,2)-A Occurences: 114(36) ALP1_YEAST : 520- 523: yisvf Lf-L--A iwlsf ANSP_SALTY : 48- 52: aigtg Lf-Lg-A garlq ANSP_SALTY : 437- 441: fllsv Lv-Lm-A fdypn ANSP_SALTY : 454- 458: ytias Lp-Li-A illva AROP_ECOLI : 33- 38: sigtg Lf-LgsA sviqs AROP_ECOLI : 102- 107: wnywv LyvLv-A maelt AROP_ECOLI : 311- 315: cnsrm LfgL--A qqgna CAN1_CANAL : 374- 378: sgsri LygL--A qagva CAN1_CANAL : 374- 380: sgsri LygLaqA gvapk CAN1_CANAL : 409- 413: aafga LgyL--A cssqg CAN1_YEAST : 536- 539: yisif Lf-L--A vwilf CTR1_YEAST : 111- 117: cigts LgeLssA yphag CTR1_YEAST : 129- 132: qfwws Lk-L--A ppkyk CTR1_YEAST : 412- 416: itlig LlyL--A sstaf CTR1_YEAST : 413- 416: tligl Ly-L--A sstaf CYCA_ECOLI : 146- 152: avivl LltLnlA tvkmf CYCA_ECOLI : 147- 152: vivll Lt-LnlA tvkmf CYCA_ECOLI : 149- 152: vlllt Ln-L--A tvkmf CYCA_ECOLI : 289- 294: velfv LvgLp-A aasvi CYCA_ECOLI : 289- 295: velfv LvgLpaA asvin CYCA_ECOLI : 322- 326: stsrm LfgL--A qegva GABP_BACSU : 309- 313: ttsrm LysL--A ernea GABP_BACSU : 370- 376: gaial LvyLviA vsqlk GABP_ECOLI : 49- 54: gpavl LayLf-A gllvv GABP_ECOLI : 373- 379: gaial LvyLviA vsqlr GAP1_YEAST : 142- 146: amvma LgeL--A vifpi GAP1_YEAST : 210- 214: dgfva LfwL--A iviin GAP1_YEAST : 301- 305: fagse LvgL--A asesv GAP1_YEAST : 301- 306: fagse LvgLa-A sesve HIP1_YEAST : 95- 99: lsvrh LltL--A vggai HIP1_YEAST : 96- 99: svrhl Lt-L--A vggai HIP1_YEAST : 142- 147: tvins LgeLs-A afpvv HIP1_YEAST : 142- 148: tvins LgeLsaA fpvvg HIP1_YEAST : 173- 177: afavn LnyL--A qwlvl HIP1_YEAST : 185- 189: lvllp Le-Lv-A asiti HIP1_YEAST : 185- 190: lvllp Le-LvaA sitik HIP1_YEAST : 374- 380: ggikg LpsLmnA iilia HIP1_YEAST : 508- 512: fivlf Lv-Li-A sfwts HUTM_BACSU : 67- 73: lvmqc LgeLsvA navtg HUTM_BACSU : 418- 423: mpiaa Ll-LcsA scigl INA1_TRIHA : 117- 121: nvvya LgeL--A imypv INA1_TRIHA : 274- 278: fsgte LvgL--A aaest INA1_TRIHA : 274- 279: fsgte LvgLa-A aestn INA1_TRIHA : 274- 280: fsgte LvgLaaA estnp INA1_TRIHA : 354- 358: dhfmn LviL--A svlsi INA1_TRIHA : 375- 379: ggsrt LtaL--A qqgya ISP5_SCHPO : 98- 102: mtvys LgeL--A vafpi ISP5_SCHPO : 98- 104: mtvys LgeLavA fping ISP5_SCHPO : 141- 146: latyp Le-LitA siclq ISP5_SCHPO : 299- 304: grder LttLs-A taasp ISP5_SCHPO : 312- 317: aspfi La-LmdA kirgl LYP1_YEAST : 423- 427: vgsrv LysL--A rtgna LYP1_YEAST : 455- 459: vctaa LglL--A flvvn LYP1_YEAST : 455- 459: vctaa Lg-Ll-A flvvn LYP1_YEAST : 480- 485: inist LagLc-A wlfis LYP1_YEAST : 555- 559: tsyis LilL--A vmfig LYP1_YEAST : 555- 559: tsyis Li-Ll-A vmfig LYSP_ECOLI : 68- 72: flmts LgeL--A aympv LYSP_ECOLI : 68- 73: flmts LgeLa-A ympvs LYSP_ECOLI : 322- 326: astrm LytL--A cdgka PAP1_YEAST : 106- 109: anakg Ls-L--A gpgsl PHEP_ECOLI : 30- 36: nrhiq LiaLggA igtgl PHEP_ECOLI : 211- 216: tgwng Li-LslA vimfs PHEP_ECOLI : 213- 216: wngli Ls-L--A vimfs PHEP_ECOLI : 261- 266: fyigs LvvLl-A lypwv PHEP_ECOLI : 345- 350: vpins Lm-LsgA itslv PHEP_ECOLI : 370- 376: kafgl LmaLvvA tllln PROY_SALTY : 104- 108: yaqen LgpL--A gyitg PUT4_YEAST : 117- 123: srhvq LiaLggA igtgl PUT4_YEAST : 361- 365: iffyv LgtL--A isviv PUTX_EMENI : 46- 50: lssrq LqlL--A iggci PUTX_EMENI : 46- 50: lssrq Lq-Ll-A iggci PUTX_EMENI : 191- 195: fwfag LkiL--A iigli PUTX_EMENI : 363- 367: agsek LysL--A gegqa PUTX_EMENI : 516- 520: vfaif La-Ly-A ghkiw ROCC_BACSU : 64- 68: lvmlc LgeL--A vampv ROCC_BACSU : 64- 70: lvmlc LgeLavA mpvag ROCC_BACSU : 107- 112: antvg Le-LtsA gilmq ROCE_BACSU : 67- 71: ltmlc LgeL--A vafpv ROCE_BACSU : 67- 73: ltmlc LgeLavA fpvsg ROCE_BACSU : 99- 105: fafgw LywLgwA vtcai ROCE_BACSU : 366- 370: tvymv LlsL--A gmsaq ROCE_BACSU : 367- 370: vymvl Ls-L--A gmsaq ROCE_BACSU : 424- 428: lntvv LisL--A fdpeq TAT2_YEAST : 272- 278: gfpgv LsvLvvA syslg TAT2_YEAST : 414- 419: imans LfgLl-A flvks TAT2_YEAST : 490- 494: alinc Li-Li-A qfycs UGA4_YEAST : 165- 168: gcsns La-L--A agvcs UGA4_YEAST : 165- 169: gcsns La-La-A gvcsi UGA4_YEAST : 444- 448: aatda LfsL--A vagnn UGA4_YEAST : 444- 450: aatda LfsLavA gnnla VAL1_YEAST : 149- 154: qaage Lg-LcyA gltgn VAL1_YEAST : 190- 195: ltvlp Lq-LvtA amtvk VAL1_YEAST : 300- 304: ggiev Ll-Ls-A aeqen VAL1_YEAST : 300- 305: ggiev Ll-LsaA eqenp VAL1_YEAST : 399- 404: ysgpr Ll-LslA eqgvl VAL1_YEAST : 400- 404: sgprl LlsL--A eqgvl VAL1_YEAST : 401- 404: gprll Ls-L--A eqgvl VAL1_YEAST : 500- 505: ywgsw LavLi-A ifflv YBR8_YEAST : 191- 196: ltvlp Le-LitA smtiq YBY2_YEAST : 122- 125: ggpas Ll-L--A falwc YBY2_YEAST : 122- 127: ggpas Ll-LafA lwcvp YBY2_YEAST : 154- 157: vsspf Lr-L--A tkcvd YBY2_YEAST : 290- 296: yfqgf LacLiqA sftia YBY2_YEAST : 459- 465: vvlnw LinLitA sqlin YCC5_YEAST : 216- 221: lcvcp Le-LvtA smtik YCC5_YEAST : 358- 363: miyri Lf-LflA tiill YCC5_YEAST : 360- 363: yrilf Lf-L--A tiill YCC5_YEAST : 414- 420: navil LsvLsmA nssfy YCC5_YEAST : 538- 542: cimmi Li-Li-A qfwva YEEF_ECOLI : 106- 111: gwssl LdyLf-A pmini YEEF_ECOLI : 424- 429: essmv Lg-LiwA aigli YEEF_ECOLI : 433- 437: waaig LiyL--A cvtks YEEF_KLEPN : 98- 103: llaik Ld-LvtA tapin YEEF_KLEPN : 109- 114: tapin LgaLv-A ftfvn YFF5_YEAST : 356- 360: igsrt LthL--A hegla YFF5_YEAST : 456- 459: pwtpv Ls-L--A anifl YFF5_YEAST : 456- 460: pwtpv Ls-La-A nifla YIFK_ECOLI : 134- 138: liava LvaL--A nlaav YIFK_ECOLI : 137- 141: valva LanL--A avrly YIFK_ECOLI : 137- 142: valva LanLa-A vrlyg YIFK_ECOLI : 310- 314: scgrm LyaL--A knrql YIFK_SALTY : 134- 138: liavg LvaL--A nlaav YIFK_SALTY : 137- 141: vglva LanL--A avrly YIFK_SALTY : 137- 142: vglva LanLa-A vrlyg YIFK_SALTY : 310- 314: scgrm LyaL--A knrql YKR4_YEAST : 197- 203: vtvvg LvnLkfA rfiet YKR4_YEAST : 277- 281: qgfsm LpaL--A devkv YKR4_YEAST : 413- 417: iisyf LglL--A lista YKR4_YEAST : 413- 417: iisyf Lg-Ll-A lista YKR4_YEAST : 433- 438: igaav Lc-LcsA tfipl YKR4_YEAST : 525- 528: kynfr Lp-L--A ddika YPEV_LACDL : 36- 40: tigtg Lf-Lg-A gttis YPEV_LACDL : 125- 130: yvqyw LpgLp-A wliev YPEV_LACDL : 143- 148: lgllt LlnLt-A aklfg YPEV_LACDL : 143- 149: lgllt LlnLtaA klfge YPEV_LACDL : 144- 148: glltl Ln-Lt-A aklfg YPEV_LACDL : 144- 149: glltl Ln-LtaA klfge Number of patterns evaluated by Pratt:2324 Total running time: 9 seconds