------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 9 sequences from file ALDOSE_1_EPIMERASE PATTERN CONSERVATION: CM: min Nr of Seqs to Match 9 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 50 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename ALDOSE_1_EPIMERASE.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: GALM_ACICA 381 GALM_ECOLI 346 GALM_HAEIN 340 GALM_LACHE 129 GALM_STRTR 348 GALX_KLULA 687 GALX_PACTA 689 GALX_YEAST 699 YH10_YEAST 341 Pratt run started at Thu Feb 6 18:35:18 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 14.6802 11( 9) G-x(3,5)-G-R-x(1,3)-A 2: 12.5102 10( 9) G-x(2)-A-x-R 3: 12.0102 9( 9) N-x(2,3)-N-H 4: 12.0102 10( 9) G-x(3,4)-R-I 5: 12.0102 10( 9) E-x(5)-D-x(1,2)-N 6: 12.0102 12( 9) G-x(1,2)-I-x(4)-N 7: 12.0102 12( 9) G-x(2,3)-G-x(5)-I 8: 11.5102 10( 9) D-x(0,2)-L-x-L 9: 11.5102 13( 9) V-x(2,3)-T-x(2,3)-D 10: 11.5102 16( 9) G-x(0,1)-D-x(2,3)-V 11: 11.5102 9( 9) G-x(4)-H-x(3,5)-G 12: 11.5102 13( 9) L-x(2)-N-x(0,2)-G 13: 11.5102 18( 9) L-x(2,3)-N-x(1,2)-G 14: 11.5102 14( 9) L-x(1,2)-N-x(1,2)-G 15: 11.5102 13( 9) L-x(2,4)-N-x-G 16: 11.5102 12( 9) L-x(1,3)-N-x-G 17: 11.5102 12( 9) L-x(3,4)-G-x(0,1)-N 18: 11.5102 9( 9) T-x(0,1)-H-x(3,4)-N 19: 11.5102 12( 9) A-x(0,2)-G-R 20: 11.5102 14( 9) G-R-x(1,3)-A Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 21.6015 9( 9) G-x(2)-A-[GN]-R-[IV]-x(2)-[AGS] B 2: 20.2256 9( 9) N-x(2,3)-N-H-x(3)-[GN]-[IL]-x(4)-[DEGNQS] C 3: 18.3284 9( 9) G-x(2)-A-x-R-[IV]-x(2)-[AGS] D 4: 17.2746 10( 9) G-x(2,3)-G-x(3)-[CNV]-[ERS]-I E 5: 16.9015 9( 9) G-x(3,5)-G-R-x(1,3)-A-[GNSV] F 6: 16.7523 10( 9) G-R-x(1,3)-A-[GNV]-[DNR] G 7: 13.4207 9( 9) T-x(0,1)-H-x(3,4)-N-x-[DEGNS] H 8: 12.9309 10( 9) D-x(0,2)-L-[ADENQST]-L I 9: 12.0102 10( 9) G-x(3,4)-R-I J 10: 12.0102 10( 9) E-x(5)-D-x(1,2)-N K 11: 12.0102 12( 9) G-x(1,2)-I-x(4)-N L 12: 11.5102 13( 9) V-x(2,3)-T-x(2,3)-D M 13: 11.5102 16( 9) G-x(0,1)-D-x(2,3)-V N 14: 11.5102 9( 9) G-x(4)-H-x(3,5)-G O 15: 11.5102 13( 9) L-x(2)-N-x(0,2)-G P 16: 11.5102 18( 9) L-x(2,3)-N-x(1,2)-G Q 17: 11.5102 14( 9) L-x(1,2)-N-x(1,2)-G R 18: 11.5102 13( 9) L-x(2,4)-N-x-G S 19: 11.5102 12( 9) L-x(1,3)-N-x-G T 20: 11.5102 12( 9) L-x(3,4)-G-x(0,1)-N Best patterns with alignements: fitness hits(seqs) Pattern A 1: 21.6015 9( 9) G-x(2)-A-[GN]-R-[IV]-x(2)-[AGS] Occurences: 9(9) GALM_ACICA : 100- 109: fggli GryANRIgnA kfsld GALM_ECOLI : 74- 83: lgasi GryANRIanS rytfd GALM_HAEIN : 72- 81: lgasv GryANRIanA qfeln GALM_LACHE : 70- 79: lggtv GriAGRVrkG qwrhg GALM_STRTR : 75- 84: acqsi GrvAGRIgkA sythn GALX_KLULA : 416- 425: fgatv GpyANRIanG tfein GALX_PACTA : 418- 427: fgati GrvANRIskG dllin GALX_YEAST : 428- 437: igati GryANRIskG kfslc YH10_YEAST : 65- 74: igatv GryANRIykG mfsme B 2: 20.2256 9( 9) N-x(2,3)-N-H-x(3)-[GN]-[IL]-x(4)-[DEGNQS] Occurences: 9(9) GALM_ACICA : 201- 215: qptvv Nlt-NHsyfNLsgagN npygv GALM_ECOLI : 171- 185: kpcpv Nmt-NHvyfNLdgeqS dvrnh GALM_HAEIN : 168- 182: kdtal Nlt-NHtyfNLenaeQ gsdvr GALM_LACHE : 93- 108: hqlpi NdgeNHihgGIgtdtE vwdfk GALM_STRTR : 176- 190: estvf Npt-NHvyfNLsdkqD lsshe GALX_KLULA : 520- 534: gstga Nit-NHtyfNLnkfnE atikg GALX_PACTA : 252- 267: hiaal NylfNHkdnGLcrewN lgtgn GALX_YEAST : 533- 547: eatpi Nlt-NHsyfNLnkpyG dtieg YH10_YEAST : 171- 185: eatpi Nmt-NHtyfNLnktmD kksis C 3: 18.3284 9( 9) G-x(2)-A-x-R-[IV]-x(2)-[AGS] Occurences: 9(9) GALM_ACICA : 100- 109: fggli GryAnRIgnA kfsld GALM_ECOLI : 74- 83: lgasi GryAnRIanS rytfd GALM_HAEIN : 72- 81: lgasv GryAnRIanA qfeln GALM_LACHE : 70- 79: lggtv GriAgRVrkG qwrhg GALM_STRTR : 75- 84: acqsi GrvAgRIgkA sythn GALX_KLULA : 416- 425: fgatv GpyAnRIanG tfein GALX_PACTA : 418- 427: fgati GrvAnRIskG dllin GALX_YEAST : 428- 437: igati GryAnRIskG kfslc YH10_YEAST : 65- 74: igatv GryAnRIykG mfsme D 4: 17.2746 10( 9) G-x(2,3)-G-x(3)-[CNV]-[ERS]-I Occurences: 10(9) GALM_ACICA : 96- 106: egihf GgliGryaNRI gnakf GALM_ACICA : 97- 106: gihfg Gli-GryaNRI gnakf GALM_ECOLI : 70- 80: qaafl GasiGryaNRI ansry GALM_HAEIN : 68- 78: hqsyl GasvGryaNRI anaqf GALM_LACHE : 9- 19: sfnky GrkdGkdlCEI vlend GALM_STRTR : 141- 150: yssvd Gfp-GdvtVSI syrln GALX_KLULA : 412- 422: snpff GatvGpyaNRI angtf GALX_PACTA : 414- 424: dnpff GatiGrvaNRI skgdl GALX_YEAST : 424- 434: dsayi GatiGryaNRI skgkf YH10_YEAST : 61- 71: gynyi GatvGryaNRI ykgmf E 5: 16.9015 9( 9) G-x(3,5)-G-R-x(1,3)-A-[GNSV] Occurences: 9(9) GALM_ACICA : 96- 104: egihf Ggli--GRy--AN rigna GALM_ECOLI : 70- 78: qaafl Gasi--GRy--AN rians GALM_HAEIN : 68- 76: hqsyl Gasv--GRy--AN riana GALM_LACHE : 66- 74: ernyl Ggtv--GRi--AG rvrkg GALM_STRTR : 75- 85: acqsi Grva--GRigkAS ythnm GALX_KLULA : 647- 659: yenra GiccepGRyidAV nnpew GALX_PACTA : 414- 422: dnpff Gati--GRv--AN riskg GALX_YEAST : 424- 432: dsayi Gati--GRy--AN riskg YH10_YEAST : 61- 69: gynyi Gatv--GRy--AN riykg F 6: 16.7523 10( 9) G-R-x(1,3)-A-[GNV]-[DNR] Occurences: 10(9) GALM_ACICA : 100- 105: fggli GRy--ANR ignak GALM_ECOLI : 74- 79: lgasi GRy--ANR iansr GALM_HAEIN : 72- 77: lgasv GRy--ANR ianaq GALM_LACHE : 70- 75: lggtv GRi--AGR vrkgq GALM_STRTR : 75- 80: acqsi GRv--AGR igkas GALX_KLULA : 653- 660: iccep GRyidAVN npewk GALX_PACTA : 418- 423: fgati GRv--ANR iskgd GALX_YEAST : 309- 314: pykvt GRr--AGD vlnlt GALX_YEAST : 428- 433: igati GRy--ANR iskgk YH10_YEAST : 65- 70: igatv GRy--ANR iykgm G 7: 13.4207 9( 9) T-x(0,1)-H-x(3,4)-N-x-[DEGNS] Occurences: 9(9) GALM_ACICA : 203- 211: tvvnl TnHsyf-NlS gagnn GALM_ECOLI : 173- 181: cpvnm TnHvyf-NlD geqsd GALM_HAEIN : 170- 178: talnl TnHtyf-NlE naeqg GALM_LACHE : 87- 95: rhgle T-HqlpiNdG enhih GALM_STRTR : 178- 186: tvfnp TnHvyf-NlS dkqdl GALX_KLULA : 522- 530: tgani TnHtyf-NlN kfnea GALX_PACTA : 532- 540: tavsl TnHsyw-NiG nqpsi GALX_YEAST : 535- 543: tpinl TnHsyf-NlN kpygd YH10_YEAST : 173- 181: tpinm TnHtyf-NlN ktmdk H 8: 12.9309 10( 9) D-x(0,2)-L-[ADENQST]-L Occurences: 10(9) GALM_ACICA : 340- 344: lyrqa Da-LAL etqhf GALM_ECOLI : 267- 272: hvwsa DekLQL kvytt GALM_HAEIN : 164- 169: gmcdk DtaLNL tnhty GALM_HAEIN : 265- 268: tsptg D--LSL evrts GALM_LACHE : 124- 127: nsarv D--LTL ld GALM_STRTR : 201- 206: lqiys DyrLEL dseli GALX_KLULA : 302- 306: arrdg Dv-LNL takcd GALX_PACTA : 302- 306: grrdg Dv-LNL tanpk GALX_YEAST : 314- 318: grrag Dv-LNL takpd YH10_YEAST : 151- 156: tlnva DmtLDL eyeak I 9: 12.0102 10( 9) G-x(3,4)-R-I Occurences: 10(9) GALM_ACICA : 100- 106: fggli GryanRI gnakf GALM_ECOLI : 74- 80: lgasi GryanRI ansry GALM_HAEIN : 72- 78: lgasv GryanRI anaqf GALM_LACHE : 66- 72: ernyl GgtvgRI agrvr GALM_LACHE : 67- 72: rnylg Gtvg-RI agrvr GALM_STRTR : 75- 81: acqsi GrvagRI gkasy GALX_KLULA : 416- 422: fgatv GpyanRI angtf GALX_PACTA : 418- 424: fgati GrvanRI skgdl GALX_YEAST : 428- 434: igati GryanRI skgkf YH10_YEAST : 65- 71: igatv GryanRI ykgmf J 10: 12.0102 10( 9) E-x(5)-D-x(1,2)-N Occurences: 10(9) GALM_ACICA : 345- 354: dalal EtqhfpDspN qptfp GALM_ECOLI : 309- 318: qglal EseflpDspN hpewp GALM_HAEIN : 305- 314: sgial EtqclpDtpN hpewq GALM_LACHE : 39- 47: ygatl EkvllnDe-N milsl GALM_STRTR : 311- 320: eaiam EaqtlpDavN hkgfg GALX_KLULA : 318- 326: atnel EwktelDv-N kacvd GALX_KLULA : 651- 660: agicc EpgryiDavN npewk GALX_PACTA : 356- 365: tkfds EsltnyDrlN tvrtf GALX_YEAST : 665- 674: qgfai EpgryiDaiN qenwk YH10_YEAST : 306- 315: sgfav EqgryvDaiN rdgwr K 11: 12.0102 12( 9) G-x(1,2)-I-x(4)-N Occurences: 12(9) GALM_ACICA : 96- 104: egihf GglIgryaN rigna GALM_ACICA : 97- 104: gihfg Gl-IgryaN rigna GALM_ECOLI : 70- 78: qaafl GasIgryaN rians GALM_HAEIN : 87- 95: qfeln GelIklssN qgkhq GALM_LACHE : 26- 33: lendh Gm-IvkvlN ygatl GALM_STRTR : 268- 276: hdkes GdgIeifsN rnglv GALM_STRTR : 270- 278: kesgd GieIfsnrN glvif GALX_KLULA : 653- 661: iccep GryIdavnN pewks GALX_PACTA : 414- 422: dnpff GatIgrvaN riskg GALX_PACTA : 547- 555: qpsie GthIklvsN khles GALX_YEAST : 424- 432: dsayi GatIgryaN riskg YH10_YEAST : 51- 58: ypdih Gy-IsdgyN yigat L 12: 11.5102 13( 9) V-x(2,3)-T-x(2,3)-D Occurences: 13(9) GALM_ACICA : 248- 254: geias Vag-Tpf-D frmpk GALM_ECOLI : 215- 221: dglks Vag-Tsf-D frsak GALM_HAEIN : 143- 150: nvdvs Vty-TltgD nsvki GALM_HAEIN : 214- 220: splkh Vvn-Tsf-D friak GALM_LACHE : 123- 129: ensar Vdl-Tll-D GALM_STRTR : 219- 225: gqkin Vde-Tny-D frktt GALM_STRTR : 281- 287: nrngl Vif-Tmd-D iedni GALX_KLULA : 231- 238: ddyds Vdg-TpirD yihvv GALX_KLULA : 303- 311: rrdgd VlnlTakcD ratne GALX_PACTA : 497- 503: dvetk Viy-Tvr-D tgvgg GALX_PACTA : 572- 578: ptgki Vts-Tdl-D sqnsa GALX_YEAST : 315- 323: rragd VlnlTakpD rakre YH10_YEAST : 121- 127: ddlyi Vef-Tll-D drtlp YH10_YEAST : 121- 128: ddlyi Vef-TlldD rtlpn M 13: 11.5102 16( 9) G-x(0,1)-D-x(2,3)-V Occurences: 16(9) GALM_ACICA : 135- 140: hsgnp GfDkr-V wqvkp GALM_ACICA : 277- 283: laygy GyDqtwV inqks GALM_ECOLI : 254- 259: llqak G-DgkkV aahvw GALM_HAEIN : 149- 153: tytlt G-Dns-V kieya GALM_LACHE : 104- 109: ihggi GtDte-V wdfkp GALM_STRTR : 144- 148: vdgfp G-Dvt-V sisyr GALM_STRTR : 241- 247: ieann GfDdafV vgggt GALX_KLULA : 225- 231: klyvf GdDydsV dgtpi GALX_KLULA : 633- 638: fqvyt G-DyvdV kdkye GALX_PACTA : 523- 529: llees GrDstaV sltnh GALX_PACTA : 586- 591: nsakl GpDgp-V fdycf GALX_PACTA : 640- 645: fqfyt G-DgvdV agvft GALX_PACTA : 642- 648: fytgd GvDvagV ftkrs GALX_YEAST : 35- 40: elien GyDcv-V adnls GALX_YEAST : 499- 503: dtefp G-Dll-V tiqyt YH10_YEAST : 137- 141: pnefp G-Dla-V nlkyt N 14: 11.5102 9( 9) G-x(4)-H-x(3,5)-G Occurences: 9(9) GALM_ACICA : 125- 135: leknn GpnslHsgnp-G fdkrv GALM_ECOLI : 99- 109: lspsq GvnqlHggpe-G fdkrr GALM_HAEIN : 97- 106: lssnq GkhqlHgge--G fdkrr GALM_LACHE : 95- 104: lpind GenhiHggi--G tdtev GALM_STRTR : 100- 110: lpkne GdnclHggpk-G mqvqn GALX_KLULA : 449- 460: nvvhs GinsyHskkflG pivkn GALX_PACTA : 439- 450: thyqv GlnelHrtslhG gtygy GALX_YEAST : 453- 462: ltvnn GvnanHssi--G sfhrk YH10_YEAST : 45- 56: esivl GypdiHgyisdG ynyig O 15: 11.5102 13( 9) L-x(2)-N-x(0,2)-G Occurences: 13(9) GALM_ACICA : 120- 125: gktyn LekNn-G pnslh GALM_ACICA : 324- 330: ytadh LlgNivG angvl GALM_ECOLI : 20- 25: yrllt LrnNa-G mvvtl GALM_HAEIN : 92- 97: gelik LssNq-G khqlh GALM_LACHE : 90- 95: lethq LpiNd-G enhih GALM_STRTR : 95- 100: mvlys LpkNe-G dnclh GALX_KLULA : 544- 549: gskvq LidNt-G levnn GALX_PACTA : 21- 25: htvve LvnN--G ynvvv GALX_PACTA : 429- 433: iskgd LliN--G thyqv GALX_YEAST : 31- 35: htvve LieN--G ydcvv GALX_YEAST : 398- 402: asivd LkvN--G qsvvl GALX_YEAST : 448- 453: nkdyq LtvNn-G vnanh YH10_YEAST : 85- 91: dgphq LtvNncG ntnhs P 16: 11.5102 18( 9) L-x(2,3)-N-x(1,2)-G Occurences: 18(9) GALM_ACICA : 120- 125: gktyn Lek-Nn-G pnslh GALM_ACICA : 129- 135: ngpns LhsgNp-G fdkrv GALM_ACICA : 324- 330: ytadh Llg-NivG angvl GALM_ECOLI : 18- 25: qpyrl LtlrNnaG mvvtl GALM_ECOLI : 20- 25: yrllt Lrn-Na-G mvvtl GALM_HAEIN : 92- 97: gelik Lss-Nq-G khqlh GALM_HAEIN : 199- 205: nadfy LpvdNe-G ipnsp GALM_LACHE : 90- 95: lethq Lpi-Nd-G enhih GALM_STRTR : 95- 100: mvlys Lpk-Ne-G dnclh GALX_KLULA : 182- 189: fsfai LryfNpiG ahpsg GALX_KLULA : 544- 549: gskvq Lid-Nt-G levnn GALX_PACTA : 179- 186: wkcai LryfNpiG ahpsg GALX_PACTA : 397- 404: gikln LgfdNlkG ylred GALX_YEAST : 157- 164: peecp LgptNpyG htkya GALX_YEAST : 190- 197: wkfai LryfNpiG ahpsg GALX_YEAST : 407- 414: gqsvv LgyeNeeG ylnpd GALX_YEAST : 448- 453: nkdyq Ltv-Nn-G vnanh YH10_YEAST : 85- 91: dgphq LtvnNc-G ntnhs YH10_YEAST : 85- 91: dgphq Ltv-NncG ntnhs Q 17: 11.5102 14( 9) L-x(1,2)-N-x(1,2)-G Occurences: 14(9) GALM_ACICA : 120- 125: gktyn LekNn-G pnslh GALM_ACICA : 324- 330: ytadh LlgNivG angvl GALM_ACICA : 325- 330: tadhl Lg-NivG angvl GALM_ECOLI : 20- 25: yrllt LrnNa-G mvvtl GALM_ECOLI : 20- 25: yrllt Lr-NnaG mvvtl GALM_HAEIN : 20- 25: yqlit Lq-NenG mrvqf GALM_HAEIN : 92- 97: gelik LssNq-G khqlh GALM_LACHE : 21- 26: lceiv Le-NdhG mivkv GALM_LACHE : 90- 95: lethq LpiNd-G enhih GALM_STRTR : 95- 100: mvlys LpkNe-G dnclh GALX_KLULA : 376- 380: sfevk La-Nl-G ativd GALX_KLULA : 544- 549: gskvq LidNt-G levnn GALX_PACTA : 21- 25: htvve Lv-Nn-G ynvvv GALX_YEAST : 448- 453: nkdyq LtvNn-G vnanh YH10_YEAST : 85- 91: dgphq LtvNncG ntnhs R 18: 11.5102 13( 9) L-x(2,4)-N-x-G Occurences: 13(9) GALM_ACICA : 120- 125: gktyn Lek--NnG pnslh GALM_ACICA : 129- 135: ngpns Lhsg-NpG fdkrv GALM_ECOLI : 18- 25: qpyrl LtlrnNaG mvvtl GALM_ECOLI : 20- 25: yrllt Lrn--NaG mvvtl GALM_HAEIN : 92- 97: gelik Lss--NqG khqlh GALM_HAEIN : 199- 205: nadfy Lpvd-NeG ipnsp GALM_LACHE : 90- 95: lethq Lpi--NdG enhih GALM_STRTR : 95- 100: mvlys Lpk--NeG dnclh GALX_KLULA : 544- 549: gskvq Lid--NtG levnn GALX_PACTA : 262- 269: hkdng LcrewNlG tgngs GALX_YEAST : 274- 281: neneg LcrewNlG sgkgs GALX_YEAST : 448- 453: nkdyq Ltv--NnG vnanh YH10_YEAST : 85- 91: dgphq Ltvn-NcG ntnhs S 19: 11.5102 12( 9) L-x(1,3)-N-x-G Occurences: 12(9) GALM_ACICA : 120- 125: gktyn Lek-NnG pnslh GALM_ACICA : 129- 135: ngpns LhsgNpG fdkrv GALM_ECOLI : 20- 25: yrllt Lrn-NaG mvvtl GALM_HAEIN : 92- 97: gelik Lss-NqG khqlh GALM_HAEIN : 199- 205: nadfy LpvdNeG ipnsp GALM_LACHE : 90- 95: lethq Lpi-NdG enhih GALM_STRTR : 95- 100: mvlys Lpk-NeG dnclh GALX_KLULA : 376- 380: sfevk La--NlG ativd GALX_KLULA : 544- 549: gskvq Lid-NtG levnn GALX_PACTA : 21- 25: htvve Lv--NnG ynvvv GALX_YEAST : 448- 453: nkdyq Ltv-NnG vnanh YH10_YEAST : 85- 91: dgphq LtvnNcG ntnhs T 20: 11.5102 12( 9) L-x(3,4)-G-x(0,1)-N Occurences: 12(9) GALM_ACICA : 120- 127: gktyn LeknnGpN slhsg GALM_ACICA : 210- 215: hsyfn Lsga-G-N npygv GALM_ACICA : 210- 216: hsyfn Lsga-GnN pygvl GALM_ACICA : 325- 332: tadhl LgnivGaN gvlyr GALM_ECOLI : 94- 101: getvt LspsqGvN qlhgg GALM_ECOLI : 281- 287: ttapa LqfysG-N flggt GALM_HAEIN : 277- 283: tsqaa LqvytG-N ylagt GALM_LACHE : 90- 97: lethq LpindGeN hihgg GALM_STRTR : 95- 102: mvlys LpkneGdN clhgg GALX_KLULA : 556- 561: evnnk Llpt-G-N lkkyt GALX_PACTA : 21- 27: htvve Lvnn-GyN vvvvd GALX_YEAST : 448- 455: nkdyq LtvnnGvN anhss YH10_YEAST : 286- 292: teptv Lfyt-GdN lcdgf Number of patterns evaluated by Pratt:2207 Total running time: 2 seconds