------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 19 sequences from file ACYL_COA_DH_1 PATTERN CONSERVATION: CM: min Nr of Seqs to Match 19 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 50 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename ACYL_COA_DH_1.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: ACDA_BACSU 379 ACDB_BACSU 379 ACDB_HUMAN 432 ACDL_HUMAN 430 ACDL_RAT 430 ACDM_HUMAN 421 ACDM_MOUSE 421 ACDM_PIG 385 ACDM_RAT 421 ACDS_HUMAN 412 ACDS_MOUSE 412 ACDS_RAT 412 ACDV_RAT 655 ACD_MYCLE 389 AIDB_ECOLI 546 CAIA_ECOLI 380 IVD_CAEEL 332 IVD_HUMAN 423 IVD_RAT 424 Pratt run started at Thu Feb 6 18:30:02 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 16.6802 19( 19) E-x(3)-G-S-D 2: 12.5102 19( 19) R-x(2)-F-G 3: 12.5102 25( 19) G-S-D 4: 12.0102 45( 19) G-x(0,1)-G-x-G 5: 12.0102 24( 19) Q-x(2)-G-x(2,3)-G 6: 12.0102 32( 19) E-x(0,1)-G-x-G 7: 12.0102 23( 19) G-x(2)-G-x(1,2)-G 8: 12.0102 19( 19) G-x(2)-G-x(0,1)-G 9: 12.0102 41( 19) K-x(3,4)-L-G 10: 12.0102 24( 19) E-x(0,1)-K-x-G 11: 11.5102 31( 19) A-x(0,1)-G-x(1,2)-D 12: 11.5102 26( 19) G-x(3)-L-x(1,3)-G 13: 11.5102 25( 19) L-x(0,2)-A-x(3)-T 14: 11.5102 34( 19) K-x(1,3)-K-x-G 15: 11.5102 30( 19) A-x(4)-G-x(1,3)-A 16: 11.5102 30( 19) A-x(4,5)-G-x(1,2)-A 17: 11.5102 53( 19) A-x(1,2)-A-x(1,2)-L 18: 11.5102 32( 19) E-x(3,4)-L-x(3,4)-A 19: 11.5102 26( 19) R-x(2,3)-A-x(3,4)-G 20: 11.5102 28( 19) A-x(1,3)-R-x-L Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 21.5019 19( 19) E-x(2)-[AGNS]-G-S-D-x(2)-[AGS] B 2: 15.1720 19( 19) R-x(2)-F-G-x(2)-[ILV] C 3: 15.1035 20( 19) G-S-D-x(2)-[AGS] D 4: 12.0102 45( 19) G-x(0,1)-G-x-G E 5: 12.0102 24( 19) Q-x(2)-G-x(2,3)-G F 6: 12.0102 32( 19) E-x(0,1)-G-x-G G 7: 12.0102 23( 19) G-x(2)-G-x(1,2)-G H 8: 12.0102 19( 19) G-x(2)-G-x(0,1)-G I 9: 12.0102 41( 19) K-x(3,4)-L-G J 10: 12.0102 24( 19) E-x(0,1)-K-x-G K 11: 11.5102 31( 19) A-x(0,1)-G-x(1,2)-D L 12: 11.5102 26( 19) G-x(3)-L-x(1,3)-G M 13: 11.5102 25( 19) L-x(0,2)-A-x(3)-T N 14: 11.5102 34( 19) K-x(1,3)-K-x-G O 15: 11.5102 30( 19) A-x(4)-G-x(1,3)-A P 16: 11.5102 30( 19) A-x(4,5)-G-x(1,2)-A Q 17: 11.5102 53( 19) A-x(1,2)-A-x(1,2)-L R 18: 11.5102 32( 19) E-x(3,4)-L-x(3,4)-A S 19: 11.5102 26( 19) R-x(2,3)-A-x(3,4)-G T 20: 11.5102 28( 19) A-x(1,3)-R-x-L Best patterns with alignements: fitness hits(seqs) Pattern A 1: 21.5019 19( 19) E-x(2)-[AGNS]-G-S-D-x(2)-[AGS] Occurences: 19(19) ACDA_BACSU : 127- 136: afalt EagSGSDagS mktta ACDB_BACSU : 125- 134: afalt EphSGSDagS lrtta ACDB_HUMAN : 178- 187: sfcls EagAGSDsfA lktra ACDL_HUMAN : 174- 183: aiamt EpgAGSDlqG iktna ACDL_RAT : 174- 183: aiamt EpgAGSDlqG vrtna ACDM_HUMAN : 162- 171: aycvt EpgAGSDvaG iktka ACDM_MOUSE : 162- 171: aycvt EpsAGSDvaA iktka ACDM_PIG : 127- 136: aycvt EpgAGSDvaG iktka ACDM_RAT : 162- 171: aycvt EpsAGSDvaG iktka ACDS_HUMAN : 156- 165: cfals EpgNGSDagA astta ACDS_MOUSE : 156- 165: cfals EpgNGSDagA astta ACDS_RAT : 156- 165: cfals EpgNGSDagA astta ACDV_RAT : 218- 227: afclt EpsSGSDvaS irssa ACD_MYCLE : 136- 145: syals EreAGSDaaS mrtra AIDB_ECOLI : 191- 200: gmgmt EkqGGSDvmS nttra CAIA_ECOLI : 126- 135: nsait EpgAGSDvgS lktty IVD_CAEEL : 73- 82: siavs EphAGSDvsA irtha IVD_HUMAN : 166- 175: alams EpnAGSDvvS mklka IVD_RAT : 167- 176: alams EpnAGSDvvS mrlka B 2: 15.1720 19( 19) R-x(2)-F-G-x(2)-[ILV] Occurences: 19(19) ACDA_BACSU : 268- 275: qyake RkqFGksI aeqqg ACDB_BACSU : 266- 273: dyakq RvqFGrpI aanqg ACDB_HUMAN : 319- 326: pyike RiqFGkrL fdfqg ACDL_HUMAN : 317- 324: nyvkq RkaFGktV ahlqt ACDL_RAT : 317- 324: nyvrq RkaFGktV ahiqt ACDM_HUMAN : 306- 313: kyale RktFGklL vehqa ACDM_MOUSE : 306- 313: kyald RktFGklL vehqg ACDM_PIG : 271- 278: kyale RktFGklL aehqg ACDM_RAT : 306- 313: kyald RktFGklL vehqg ACDS_HUMAN : 297- 304: nyaen RmaFGapL tklqv ACDS_MOUSE : 297- 304: kyaen RnaFGapL tklqn ACDS_RAT : 297- 304: kyaen RhaFGapL tklqn ACDV_RAT : 366- 373: dhatn RtqFGdkI hnfgv ACD_MYCLE : 277- 284: vytkd RkqFGesI stfqs AIDB_ECOLI : 329- 336: yhahq RhvFGnpL iqqpl CAIA_ECOLI : 266- 273: ryanq RvqFGeaI grfql IVD_CAEEL : 215- 222: eyare RliFGktL ldqqy IVD_HUMAN : 309- 316: pylhv ReaFGqkI ghfql IVD_RAT : 310- 317: pylhv ReaFGqkI gqfql C 3: 15.1035 20( 19) G-S-D-x(2)-[AGS] Occurences: 20(19) ACDA_BACSU : 63- 68: dyggi GSDylA yviav ACDA_BACSU : 131- 136: teags GSDagS mktta ACDB_BACSU : 129- 134: tephs GSDagS lrtta ACDB_HUMAN : 182- 187: seaga GSDsfA lktra ACDL_HUMAN : 178- 183: tepga GSDlqG iktna ACDL_RAT : 178- 183: tepga GSDlqG vrtna ACDM_HUMAN : 166- 171: tepga GSDvaG iktka ACDM_MOUSE : 166- 171: tepsa GSDvaA iktka ACDM_PIG : 131- 136: tepga GSDvaG iktka ACDM_RAT : 166- 171: tepsa GSDvaG iktka ACDS_HUMAN : 160- 165: sepgn GSDagA astta ACDS_MOUSE : 160- 165: sepgn GSDagA astta ACDS_RAT : 160- 165: sepgn GSDagA astta ACDV_RAT : 222- 227: tepss GSDvaS irssa ACD_MYCLE : 140- 145: serea GSDaaS mrtra AIDB_ECOLI : 195- 200: tekqg GSDvmS nttra CAIA_ECOLI : 130- 135: tepga GSDvgS lktty IVD_CAEEL : 77- 82: sepha GSDvsA irtha IVD_HUMAN : 170- 175: sepna GSDvvS mklka IVD_RAT : 171- 176: sepna GSDvvS mrlka D 4: 12.0102 45( 19) G-x(0,1)-G-x-G Occurences: 45(19) ACDA_BACSU : 60- 63: wpedy G-GiG sdyla ACDA_BACSU : 339- 342: avqif G-GyG ytkdy ACDB_BACSU : 58- 61: vpeqy G-GaG advvs ACDB_BACSU : 337- 340: avqiy G-GyG ymkdy ACDB_HUMAN : 112- 115: vdpey G-GtG asfls ACDB_HUMAN : 390- 393: ciewm G-GvG ytkdy ACDL_HUMAN : 108- 111: iaehl G-GiG gdlys ACDL_HUMAN : 388- 391: cvqlh G-GwG ymwey ACDL_RAT : 108- 111: iaekh G-GiG gdlls ACDL_RAT : 388- 391: cvqlh G-GwG ymwey ACDM_HUMAN : 96- 99: ipenc G-GlG lgtfd ACDM_HUMAN : 97- 101: pencg GlGlG tfdac ACDM_HUMAN : 265- 269: envli GdGaG fkvam ACDM_HUMAN : 377- 380: avqil G-GnG fntey ACDM_MOUSE : 96- 99: ipesc G-GlG lgtfd ACDM_MOUSE : 97- 101: pescg GlGlG tfdac ACDM_MOUSE : 265- 269: envli GeGaG fkiam ACDM_MOUSE : 377- 380: avqif G-GyG fntey ACDM_PIG : 61- 64: ipesf G-GlG lgiid ACDM_PIG : 62- 66: pesfg GlGlG iidsc ACDM_PIG : 230- 234: envlt GeGaG fkiam ACDM_PIG : 342- 345: avqvf G-GnG fntey ACDM_RAT : 96- 99: ipesc G-GlG lgtfd ACDM_RAT : 97- 101: pescg GlGlG tfdac ACDM_RAT : 265- 269: envli GeGaG fkiam ACDM_RAT : 377- 380: avqif G-GyG fntey ACDS_HUMAN : 75- 78: qvkkm G-GlG llamd ACDS_HUMAN : 89- 92: vpeel G-GaG ldyla ACDS_HUMAN : 368- 371: aiqil G-GmG yvtem ACDS_MOUSE : 90- 94: peels GaGlG ylays ACDS_RAT : 368- 371: aiqil G-GmG yvtem ACDV_RAT : 151- 154: vpsel G-GlG lsntq ACDV_RAT : 438- 441: ciqim G-GmG fmkep ACDV_RAT : 514- 518: lrrrt GiGsG lslsg ACD_MYCLE : 70- 73: vpeey G-GqG adsva ACD_MYCLE : 349- 352: avqlf G-GaG ytsdf AIDB_ECOLI : 406- 409: amevl G-GiG ycees CAIA_ECOLI : 337- 340: amqvl G-GvG iagnh IVD_CAEEL : 286- 289: clqiw G-GaG ylndn IVD_HUMAN : 99- 102: apvqy G-GsG lgyle IVD_HUMAN : 100- 104: pvqyg GsGlG ylehv IVD_HUMAN : 380- 383: giqcf G-GnG yindf IVD_RAT : 100- 103: apvqy G-GsG lgyle IVD_RAT : 101- 105: pvqyg GsGlG ylehv IVD_RAT : 381- 384: giqcl G-GnG yindf E 5: 12.0102 24( 19) Q-x(2)-G-x(2,3)-G Occurences: 24(19) ACDA_BACSU : 249- 256: ngiaa QavGiaqG aldaa ACDA_BACSU : 336- 342: tteav QifGgy-G ytkdy ACDB_BACSU : 334- 340: aldav QiyGgy-G ymkdy ACDB_HUMAN : 300- 307: igiaa QmlGlaqG cfdyt ACDL_HUMAN : 385- 391: aydcv QlhGgw-G ymwey ACDL_RAT : 385- 391: ayqcv QlhGgw-G ymwey ACDM_HUMAN : 374- 380: atdav QilGgn-G fntey ACDM_MOUSE : 374- 380: atdav QifGgy-G fntey ACDM_PIG : 339- 345: atdav QvfGgn-G fntey ACDM_RAT : 374- 380: atdav QifGgy-G fntey ACDS_HUMAN : 365- 371: shqai QilGgm-G yvtem ACDS_MOUSE : 365- 371: shqai QilGsm-G yvtem ACDS_RAT : 365- 371: shqai QilGgm-G yvtem ACDV_RAT : 182- 188: tlgah QsiGfk-G illyg ACDV_RAT : 435- 441: tdeci QimGgm-G fmkep ACD_MYCLE : 258- 265: ptiga QavGiaqG aldaa ACD_MYCLE : 346- 352: ttdav QlfGga-G ytsdf AIDB_ECOLI : 179- 186: llpgg QkrGlliG mgmte CAIA_ECOLI : 334- 340: vdsam QvlGgv-G iagnh IVD_CAEEL : 283- 289: tdqcl QiwGga-G ylndn IVD_HUMAN : 97- 104: itapv QygGsglG ylehv IVD_HUMAN : 377- 383: aldgi QcfGgn-G yindf IVD_RAT : 98- 105: itapv QygGsglG ylehv IVD_RAT : 378- 384: aldgi QclGgn-G yindf F 6: 12.0102 32( 19) E-x(0,1)-G-x-G Occurences: 32(19) ACDA_BACSU : 127- 131: afalt EaGsG sdags ACDA_BACSU : 227- 231: skrlg EeGeG fkiam ACDA_BACSU : 228- 231: krlge E-GeG fkiam ACDB_BACSU : 226- 229: nllgk E-GdG fhiam ACDB_HUMAN : 178- 182: sfcls EaGaG sdsfa ACDL_HUMAN : 174- 178: aiamt EpGaG sdlqg ACDL_RAT : 174- 178: aiamt EpGaG sdlqg ACDM_HUMAN : 32- 36: anrqr EpGlG fsfef ACDM_HUMAN : 162- 166: aycvt EpGaG sdvag ACDM_MOUSE : 32- 36: aahkq EpGlG fsfel ACDM_MOUSE : 266- 269: nvlig E-GaG fkiam ACDM_PIG : 127- 131: aycvt EpGaG sdvag ACDM_PIG : 231- 234: nvltg E-GaG fkiam ACDM_RAT : 32- 36: pslkq EpGlG fsfel ACDM_RAT : 266- 269: nvlig E-GaG fkiam ACDS_HUMAN : 156- 160: cfals EpGnG sdaga ACDS_HUMAN : 256- 260: dsilg EpGmG fkiam ACDS_MOUSE : 156- 160: cfals EpGnG sdaga ACDS_MOUSE : 256- 260: enllg EpGmG fkiam ACDS_RAT : 156- 160: cfals EpGnG sdaga ACDS_RAT : 256- 260: enllg EpGmG fkiam ACDV_RAT : 325- 329: envlg EvGdG fkvav ACD_MYCLE : 236- 240: driig EpGtG fktal AIDB_ECOLI : 39- 42: eavtr E-GaG wdsdf AIDB_ECOLI : 289- 292: wllgl E-GeG irlil AIDB_ECOLI : 430- 433: vnsiw E-GsG nimcl CAIA_ECOLI : 126- 130: nsait EpGaG sdvgs CAIA_ECOLI : 226- 229: dmfgr E-GnG fnrvk IVD_CAEEL : 174- 178: syiig EeGrG fayqm IVD_CAEEL : 175- 178: yiige E-GrG fayqm IVD_HUMAN : 401- 405: dakly EiGaG tsevr IVD_RAT : 402- 406: dakly EiGgG tsevr G 7: 12.0102 23( 19) G-x(2)-G-x(1,2)-G Occurences: 23(19) ACDA_BACSU : 226- 231: askrl GeeGe-G fkiam ACDB_BACSU : 44- 50: likkm GkhGlmG ipvpe ACDB_BACSU : 224- 229: eanll GkeGd-G fhiam ACDB_HUMAN : 277- 282: eanil GqiGh-G ykyai ACDL_HUMAN : 94- 100: vweka GkqGllG vniae ACDL_RAT : 94- 100: lweka GkqGllG iniae ACDM_HUMAN : 96- 101: ipenc GglGl-G tfdac ACDM_MOUSE : 96- 101: ipesc GglGl-G tfdac ACDM_PIG : 61- 66: ipesf GglGl-G iidsc ACDM_RAT : 96- 101: ipesc GglGl-G tfdac ACDS_HUMAN : 255- 260: kdsil GepGm-G fkiam ACDS_MOUSE : 255- 260: kenll GepGm-G fkiam ACDS_RAT : 255- 260: kenll GepGm-G fkiam ACDV_RAT : 324- 329: aenvl GevGd-G fkvav ACD_MYCLE : 235- 240: gdrii GepGt-G fktal AIDB_ECOLI : 287- 292: igwll GleGe-G irlil CAIA_ECOLI : 224- 229: ekdmf GreGn-G fnrvk CAIA_ECOLI : 337- 343: amqvl GgvGiaG nhris IVD_CAEEL : 173- 178: ssyii GeeGr-G fayqm IVD_HUMAN : 85- 91: fwkql GnlGvlG itapv IVD_HUMAN : 99- 104: apvqy GgsGl-G ylehv IVD_RAT : 86- 92: fwkql GslGvlG itapv IVD_RAT : 100- 105: apvqy GgsGl-G ylehv H 8: 12.0102 19( 19) G-x(2)-G-x(0,1)-G Occurences: 19(19) ACDA_BACSU : 226- 231: askrl GeeGeG fkiam ACDB_BACSU : 224- 229: eanll GkeGdG fhiam ACDB_HUMAN : 277- 282: eanil GqiGhG ykyai ACDL_HUMAN : 108- 112: iaehl GgiG-G dlysa ACDL_RAT : 108- 112: iaekh GgiG-G dllst ACDM_HUMAN : 96- 101: ipenc GglGlG tfdac ACDM_MOUSE : 96- 101: ipesc GglGlG tfdac ACDM_PIG : 61- 66: ipesf GglGlG iidsc ACDM_RAT : 96- 101: ipesc GglGlG tfdac ACDS_HUMAN : 255- 260: kdsil GepGmG fkiam ACDS_MOUSE : 255- 260: kenll GepGmG fkiam ACDS_RAT : 255- 260: kenll GepGmG fkiam ACDV_RAT : 324- 329: aenvl GevGdG fkvav ACD_MYCLE : 235- 240: gdrii GepGtG fktal AIDB_ECOLI : 287- 292: igwll GleGeG irlil CAIA_ECOLI : 224- 229: ekdmf GreGnG fnrvk IVD_CAEEL : 173- 178: ssyii GeeGrG fayqm IVD_HUMAN : 99- 104: apvqy GgsGlG ylehv IVD_RAT : 100- 105: apvqy GgsGlG ylehv I 9: 12.0102 41( 19) K-x(3,4)-L-G Occurences: 41(19) ACDA_BACSU : 197- 203: gfftg KkekkLG irssp ACDA_BACSU : 198- 203: fftgk Kekk-LG irssp ACDB_BACSU : 195- 201: gftvg KkerkLG lygsn ACDB_BACSU : 196- 201: ftvgk Kerk-LG lygsn ACDB_HUMAN : 248- 254: glhig KpenkLG lrass ACDL_HUMAN : 95- 100: wekag Kqgl-LG vniae ACDL_RAT : 95- 100: wekag Kqgl-LG iniae ACDM_HUMAN : 142- 147: gndqq Kkky-LG rmtee ACDM_MOUSE : 30- 36: skaah KqepgLG fsfel ACDM_MOUSE : 79- 85: pfpli KraweLG linah ACDM_MOUSE : 142- 147: gndqq Kkky-LG rmteq ACDM_PIG : 44- 50: pvpll KraweLG lmnth ACDM_RAT : 30- 36: tkpsl KqepgLG fsfel ACDM_RAT : 79- 85: pfpli KraweLG linth ACDM_RAT : 142- 147: gndqq Kkky-LG rmteq ACDS_HUMAN : 72- 78: paaqv KkmggLG llamd ACDS_HUMAN : 73- 78: aaqvk Kmgg-LG llamd ACDS_HUMAN : 226- 232: gltlg KkedkLG irgss ACDS_HUMAN : 227- 232: ltlgk Kedk-LG irgss ACDS_HUMAN : 250- 255: dcrip Kdsi-LG epgmg ACDS_MOUSE : 72- 78: ptaqv KkmgeLG llamd ACDS_MOUSE : 73- 78: taqvk Kmge-LG llamd ACDS_MOUSE : 226- 232: gltlg KkedkLG irass ACDS_MOUSE : 227- 232: ltlgk Kedk-LG irass ACDS_MOUSE : 250- 255: dcrip Kenl-LG epgmg ACDS_RAT : 72- 78: ptsqv KkmgeLG llamd ACDS_RAT : 73- 78: tsqvk Kmge-LG llamd ACDS_RAT : 226- 232: gltlg KkedkLG irass ACDS_RAT : 227- 232: ltlgk Kedk-LG irass ACDS_RAT : 250- 255: dcrip Kenl-LG epgmg ACDV_RAT : 482- 488: cmdkg KeltgLG nalkn ACD_MYCLE : 207- 212: fsigp Kekk-LG ikgsp AIDB_ECOLI : 481- 487: qqqlr KpaeeLG reith CAIA_ECOLI : 196- 201: gikvt Klek-LG lrmds IVD_CAEEL : 33- 39: ahfvf KmlgqLG vfavn IVD_HUMAN : 82- 88: lrefw KqlgnLG vlgit IVD_HUMAN : 238- 244: gfsts KkldkLG mrgsn IVD_HUMAN : 239- 244: fstsk Kldk-LG mrgsn IVD_RAT : 83- 89: lrefw KqlgsLG vlgit IVD_RAT : 239- 245: gfsts KkldkLG mrgsn IVD_RAT : 240- 245: fstsk Kldk-LG mrgsn J 10: 12.0102 24( 19) E-x(0,1)-K-x-G Occurences: 24(19) ACDA_BACSU : 118- 121: qlalg E-KiG afalt ACDA_BACSU : 199- 203: ftgkk EkKlG irssp ACDB_BACSU : 197- 201: tvgkk ErKlG lygsn ACDB_HUMAN : 169- 172: pqltt E-KvG sfcls ACDB_HUMAN : 250- 254: higkp EnKlG lrass ACDL_HUMAN : 80- 83: hhsew E-KaG evsre ACDL_HUMAN : 91- 94: srevw E-KaG kqgll ACDL_RAT : 80- 83: yheew E-KaG evsre ACDL_RAT : 91- 94: srelw E-KaG kqgll ACDL_RAT : 105- 108: ginia E-KhG giggd ACDM_HUMAN : 177- 180: iktka E-KkG deyii ACDM_MOUSE : 177- 180: iktka E-KkG deyvi ACDM_PIG : 142- 145: iktka E-KkG deyii ACDM_RAT : 177- 180: iktka E-KkG deyvi ACDS_HUMAN : 228- 232: tlgkk EdKlG irgss ACDS_MOUSE : 228- 232: tlgkk EdKlG irass ACDS_RAT : 228- 232: tlgkk EdKlG irass ACDV_RAT : 297- 301: thglp EkKmG ikasn ACD_MYCLE : 208- 212: sigpk EkKlG ikgsp AIDB_ECOLI : 191- 194: gmgmt E-KqG gsdvm CAIA_ECOLI : 198- 201: kvtkl E-KlG lrmds IVD_CAEEL : 21- 24: nvaqw E-KsG rypah IVD_HUMAN : 181- 184: mklka E-KkG nhyil IVD_RAT : 182- 185: mrlka E-KkG dhyvl K 11: 11.5102 31( 19) A-x(0,1)-G-x(1,2)-D Occurences: 31(19) ACDA_BACSU : 254- 259: qavgi AqGalD aalqy ACDB_BACSU : 60- 63: eqygg A-Ga-D vvsyi ACDB_HUMAN : 181- 184: lseag A-Gs-D sfalk ACDB_HUMAN : 305- 310: qmlgl AqGcfD ytipy ACDL_HUMAN : 177- 180: mtepg A-Gs-D lqgik ACDL_RAT : 177- 180: mtepg A-Gs-D lqgvr ACDM_HUMAN : 136- 139: mpiii A-Gn-D qqkkk ACDM_HUMAN : 165- 168: vtepg A-Gs-D vagik ACDM_HUMAN : 273- 278: agfkv AmGafD ktrpv ACDM_MOUSE : 136- 139: mpvil A-Gn-D qqkkk ACDM_MOUSE : 165- 168: vteps A-Gs-D vaaik ACDM_MOUSE : 273- 278: agfki AmGafD rtrpt ACDM_PIG : 130- 133: vtepg A-Gs-D vagik ACDM_PIG : 238- 243: agfki AmGtfD ktrpp ACDM_RAT : 136- 139: mpvii A-Gn-D qqkkk ACDM_RAT : 165- 168: vteps A-Gs-D vagik ACDM_RAT : 273- 278: agfki AmGafD rtrpt ACDS_HUMAN : 91- 94: eelgg A-Gl-D ylaya ACDS_MOUSE : 16- 21: gplrr AlGvrD wrrlh ACDS_RAT : 91- 94: eelsg A-Gl-D ylays ACDV_RAT : 569- 574: llqrl AdGaiD lyamv ACD_MYCLE : 139- 142: lsere A-Gs-D aasmr ACD_MYCLE : 152- 156: rtrak AdGd-D wilng ACD_MYCLE : 263- 268: qavgi AqGalD aaivy AIDB_ECOLI : 41- 44: vtreg A-Gw-D sdfla AIDB_ECOLI : 448- 452: vlnkq A-GvyD llsea CAIA_ECOLI : 129- 132: itepg A-Gs-D vgslk IVD_CAEEL : 76- 79: vseph A-Gs-D vsair IVD_CAEEL : 310- 313: ifsig A-Gc-D evmmq IVD_HUMAN : 169- 172: msepn A-Gs-D vvsmk IVD_RAT : 170- 173: msepn A-Gs-D vvsmr L 12: 11.5102 26( 19) G-x(3)-L-x(1,3)-G Occurences: 26(19) ACDA_BACSU : 121- 129: lgeki GafaLteaG sgsda ACDB_BACSU : 44- 50: likkm GkhgLm--G ipvpe ACDB_BACSU : 144- 150: aikkn GkylLn--G skifi ACDB_HUMAN : 172- 180: ttekv GsfcLseaG agsds ACDL_HUMAN : 94- 100: vweka GkqgLl--G vniae ACDL_RAT : 94- 100: lweka GkqgLl--G iniae ACDM_HUMAN : 234- 241: pgiqi GrkeLnm-G qrcsd ACDM_MOUSE : 234- 241: pgihi GkkeLnm-G qrcsd ACDM_PIG : 94- 101: eantl GqvpLii-G gnyqq ACDM_PIG : 94- 102: eantl GqvpLiigG nyqqq ACDM_RAT : 234- 241: pgihi GkkeLnm-G qrcsd ACDS_HUMAN : 150- 158: sgdki GcfaLsepG ngsda ACDS_MOUSE : 150- 158: ngdki GcfaLsepG ngsda ACDS_RAT : 150- 158: ngdki GcfaLsepG ngsda ACDV_RAT : 11- 18: mtpsv GrqlLrl-G arssr ACDV_RAT : 135- 143: edtlq GlkeLgafG lqvps ACDV_RAT : 496- 503: lknpl GnvgLli-G easkq ACD_MYCLE : 103- 111: avnkl GtmgLilrG seelk AIDB_ECOLI : 211- 217: erled GsyrLv--G hkwff CAIA_ECOLI : 145- 151: ytrkn GkiyLn--G skcfi IVD_CAEEL : 287- 295: lqiwg GagyLndnG israf IVD_HUMAN : 120- 127: isras GavgLsy-G ahsnl IVD_HUMAN : 272- 279: ghenk GvyvLms-G ldler IVD_HUMAN : 317- 324: fgqki GhfqLmq-G kmadm IVD_RAT : 273- 280: sqesk GvyvLms-G ldler IVD_RAT : 318- 325: fgqki GqfqLmq-G kmadm IVD_RAT : 376- 382: qvald GiqcLg--G ngyin IVD_RAT : 376- 384: qvald GiqcLggnG yindf M 13: 11.5102 25( 19) L-x(0,2)-A-x(3)-T Occurences: 25(19) ACDA_BACSU : 285- 290: giafk L--AdmaT mieas ACDB_BACSU : 118- 124: asgdh Lg-AfalT ephsg ACDB_BACSU : 283- 288: gisfk L--AdmaT raeaa ACDB_HUMAN : 343- 350: hvatq LeaArllT ynaar ACDL_HUMAN : 334- 339: tvqhq L--AelkT hicvt ACDL_RAT : 13- 19: rslrv Ls-ArsaT lppps ACDL_RAT : 334- 339: tvqhk L--AelkT nicvt ACDM_HUMAN : 112- 117: lisee L--AygcT gvqta ACDM_HUMAN : 154- 161: mteep LmcAycvT epgag ACDM_MOUSE : 112- 117: litee L--AygcT gvqta ACDM_PIG : 77- 82: litee L--AygcT gvqta ACDM_PIG : 119- 126: mteep LmcAycvT epgag ACDM_RAT : 112- 117: litee L--AygcT gvqta ACDS_HUMAN : 321- 328: dmala LesArllT wraam ACDS_MOUSE : 321- 328: dmala LesArllT wraam ACDS_RAT : 321- 328: dmala LesArllT wraam ACDV_RAT : 39- 45: tsaqr Ly-AseaT qavle ACDV_RAT : 211- 217: asgqa La-AfclT epssg ACDV_RAT : 255- 260: isngg L--AdifT vfakt ACD_MYCLE : 267- 274: iaqga LdaAivyT kdrkq AIDB_ECOLI : 377- 383: dakea Lw-ArlfT paakf CAIA_ECOLI : 63- 69: eehgg Ld-AgfvT laavw IVD_CAEEL : 273- 278: lkigr L--ArkvT dqclq IVD_HUMAN : 362- 369: cagvi LysAecaT qvald IVD_RAT : 363- 370: cagvi LytAecaT qvald N 14: 11.5102 34( 19) K-x(1,3)-K-x-G Occurences: 34(19) ACDA_BACSU : 176- 180: vtdpe Kk--KkG vtafi ACDA_BACSU : 197- 203: gfftg KkekKlG irssp ACDA_BACSU : 198- 203: fftgk Kek-KlG irssp ACDB_BACSU : 41- 47: pfqli KkmgKhG lmgip ACDB_BACSU : 42- 47: fqlik Kmg-KhG lmgip ACDB_BACSU : 195- 201: gftvg KkerKlG lygsn ACDB_BACSU : 196- 201: ftvgk Ker-KlG lygsn ACDB_HUMAN : 248- 254: glhig KpenKlG lrass ACDL_HUMAN : 92- 97: revwe Kag-KqG llgvn ACDL_HUMAN : 247- 252: fikgr Klh-KmG lkaqd ACDL_RAT : 92- 97: relwe Kag-KqG llgin ACDL_RAT : 246- 252: gfikg KklhKmG mkaqd ACDL_RAT : 247- 252: fikgk Klh-KmG mkaqd ACDM_HUMAN : 175- 180: agikt Kae-KkG deyii ACDM_MOUSE : 175- 180: aaikt Kae-KkG deyvi ACDM_PIG : 140- 145: agikt Kae-KkG deyii ACDM_RAT : 175- 180: agikt Kae-KkG deyvi ACDS_HUMAN : 226- 232: gltlg KkedKlG irgss ACDS_HUMAN : 227- 232: ltlgk Ked-KlG irgss ACDS_MOUSE : 226- 232: gltlg KkedKlG irass ACDS_MOUSE : 227- 232: ltlgk Ked-KlG irass ACDS_RAT : 226- 232: gltlg KkedKlG irass ACDS_RAT : 227- 232: ltlgk Ked-KlG irass ACDV_RAT : 553- 557: eaklm Kh--KkG ivneq ACD_MYCLE : 207- 212: fsigp Kek-KlG ikgsp AIDB_ECOLI : 263- 267: rlerl Kd--KlG nrsna CAIA_ECOLI : 196- 201: gikvt Kle-KlG lrmds IVD_CAEEL : 267- 271: ltama Kl--KiG rlark IVD_HUMAN : 179- 184: vsmkl Kae-KkG nhyil IVD_HUMAN : 238- 244: gfsts KkldKlG mrgsn IVD_HUMAN : 239- 244: fstsk Kld-KlG mrgsn IVD_RAT : 180- 185: vsmrl Kae-KkG dhyvl IVD_RAT : 239- 245: gfsts KkldKlG mrgsn IVD_RAT : 240- 245: fstsk Kld-KlG mrgsn O 15: 11.5102 30( 19) A-x(4)-G-x(1,3)-A Occurences: 30(19) ACDA_BACSU : 247- 254: grngi AaqavGi--A qgald ACDB_BACSU : 245- 252: grigi AaqalGi--A eaale ACDB_BACSU : 245- 254: grigi AaqalGiaeA aleha ACDB_HUMAN : 298- 305: grigi AaqmlGl--A qgcfd ACDL_HUMAN : 163- 171: ipqmt AgkciGai-A mtepg ACDL_RAT : 163- 171: ipqmt AgkciGai-A mtepg ACDM_HUMAN : 113- 122: iseel AygctGvqtA iegns ACDM_HUMAN : 285- 292: trpvv AagavGl--A qrald ACDM_HUMAN : 357- 365: yyasi AkafaGdi-A nqlat ACDM_MOUSE : 113- 122: iteel AygctGvqtA ieans ACDM_MOUSE : 285- 292: trptv AagavGl--A qrald ACDM_MOUSE : 357- 365: yyasi AkafaGdi-A nqlat ACDM_PIG : 78- 87: iteel AygctGvqtA ieant ACDM_PIG : 250- 257: trppv AagavGl--A qrald ACDM_RAT : 113- 122: iteel AygctGvqtA ieans ACDM_RAT : 285- 292: trptv AagavGl--A qrald ACDM_RAT : 357- 365: yfasi AkafaGdi-A nqlat ACDS_HUMAN : 204- 212: astdr AlqnkGis-A flvpm ACDS_HUMAN : 276- 283: grigi AsqalGi--A qtald ACDS_MOUSE : 276- 283: grigi AsqalGi--A qasld ACDS_MOUSE : 276- 285: grigi AsqalGiaqA sldca ACDS_RAT : 9- 16: allar AggslGr--A lrard ACDS_RAT : 276- 283: grigi AsqalGi--A qasld ACDS_RAT : 276- 285: grigi AsqalGiaqA sldca ACDV_RAT : 345- 354: grfgm AatlaGtmkA iiaka ACD_MYCLE : 54- 62: eeala AlnasGfn-A ihvpe ACD_MYCLE : 344- 351: evttd AvqlfGg--A gytsd AIDB_ECOLI : 350- 358: vlsrm AlqleGqt-A llfrl CAIA_ECOLI : 245- 252: erflv AltnyGt--A mcafe IVD_CAEEL : 266- 274: mltam AklkiGrl-A rkvtd IVD_HUMAN : 4- 13: mat AtrllGwrvA swrlr IVD_HUMAN : 288- 297: erlvl AggplGlmqA vldht IVD_RAT : 289- 298: erlvl AggplGimqA vldht P 16: 11.5102 30( 19) A-x(4,5)-G-x(1,2)-A Occurences: 30(19) ACDA_BACSU : 115- 124: yltql AlgekiGafA lteag ACDA_BACSU : 247- 254: grngi Aaqav-Gi-A qgald ACDB_BACSU : 113- 122: yipnl AsgdhlGafA lteph ACDB_BACSU : 245- 252: grigi Aaqal-Gi-A eaale ACDB_HUMAN : 298- 305: grigi Aaqml-Gl-A qgcfd ACDL_HUMAN : 163- 171: ipqmt Agkci-GaiA mtepg ACDL_RAT : 25- 34: lppps ArcshsGaeA rletp ACDL_RAT : 163- 171: ipqmt Agkci-GaiA mtepg ACDM_HUMAN : 285- 292: trpvv Aagav-Gl-A qrald ACDM_HUMAN : 357- 365: yyasi Akafa-GdiA nqlat ACDM_MOUSE : 285- 292: trptv Aagav-Gl-A qrald ACDM_MOUSE : 357- 365: yyasi Akafa-GdiA nqlat ACDM_PIG : 250- 257: trppv Aagav-Gl-A qrald ACDM_RAT : 285- 292: trptv Aagav-Gl-A qrald ACDM_RAT : 357- 365: yfasi Akafa-GdiA nqlat ACDS_HUMAN : 204- 212: astdr Alqnk-GisA flvpm ACDS_HUMAN : 276- 283: grigi Asqal-Gi-A qtald ACDS_MOUSE : 276- 283: grigi Asqal-Gi-A qasld ACDS_RAT : 9- 16: allar Aggsl-Gr-A lrard ACDS_RAT : 276- 283: grigi Asqal-Gi-A qasld ACDV_RAT : 416- 425: fqiea AiskifGseA awkvt ACD_MYCLE : 53- 62: peeal AalnasGfnA ihvpe ACD_MYCLE : 54- 62: eeala Alnas-GfnA ihvpe ACD_MYCLE : 344- 351: evttd Avqlf-Gg-A gytsd AIDB_ECOLI : 58- 67: qqlgt AeslelGrlA nvnpp AIDB_ECOLI : 350- 358: vlsrm Alqle-GqtA llfrl CAIA_ECOLI : 245- 252: erflv Altny-Gt-A mcafe IVD_CAEEL : 266- 274: mltam Aklki-GrlA rkvtd IVD_HUMAN : 215- 224: ktdla AvpasrGitA fivek IVD_RAT : 216- 225: ktdlt AvpasrGitA fivek Q 17: 11.5102 53( 19) A-x(1,2)-A-x(1,2)-L Occurences: 53(19) ACDA_BACSU : 257- 262: giaqg AldAa-L qyake ACDB_BACSU : 233- 237: dgfhi Am-An-L nvgri ACDB_BACSU : 252- 256: qalgi Ae-Aa-L ehavd ACDB_BACSU : 290- 296: dmatr AeaArhL vyhaa ACDB_BACSU : 325- 330: fasda AvkAa-L davqi ACDB_HUMAN : 211- 216: mwiss AehAg-L flvma ACDB_HUMAN : 337- 343: lqhqv AhvAtqL eaarl ACDL_HUMAN : 270- 274: dirlp As-Al-L geenk ACDL_RAT : 15- 20: lrvls ArsAt-L pppsa ACDL_RAT : 32- 36: cshsg Ae-Ar-L etpsa ACDL_RAT : 270- 274: dvrlp As-Al-L geenk ACDM_HUMAN : 285- 291: trpvv AagAvgL aqral ACDM_HUMAN : 286- 291: rpvva Ag-AvgL aqral ACDM_MOUSE : 122- 128: tgvqt AieAnsL gqmpv ACDM_MOUSE : 285- 291: trptv AagAvgL aqral ACDM_MOUSE : 286- 291: rptva Ag-AvgL aqral ACDM_PIG : 87- 93: tgvqt AieAntL gqvpl ACDM_PIG : 250- 256: trppv AagAvgL aqral ACDM_PIG : 251- 256: rppva Ag-AvgL aqral ACDM_PIG : 327- 333: akaya AdiAnqL atdav ACDM_RAT : 122- 128: tgvqt AieAnsL gqmpv ACDM_RAT : 285- 291: trptv AagAvgL aqral ACDM_RAT : 286- 291: rptva Ag-AvgL aqral ACDS_HUMAN : 2- 6: m Aa-Al-L arasg ACDS_HUMAN : 299- 304: aenrm AfgAp-L tklqv ACDS_HUMAN : 315- 321: iqfkl AdmAlaL esarl ACDS_HUMAN : 345- 350: pfike AamAk-L aasea ACDS_HUMAN : 346- 350: fikea Am-Ak-L aasea ACDS_MOUSE : 2- 6: m Aa-Al-L ararg ACDS_MOUSE : 283- 287: qalgi Aq-As-L dcavk ACDS_MOUSE : 299- 304: aenrn AfgAp-L tklqn ACDS_MOUSE : 315- 321: iqfkl AdmAlaL esarl ACDS_RAT : 2- 6: m Aa-Al-L aragg ACDS_RAT : 283- 287: qalgi Aq-As-L dcavk ACDS_RAT : 299- 304: aenrh AfgAp-L tklqn ACDS_RAT : 315- 321: iqfkl AdmAlaL esarl ACDS_RAT : 346- 350: ftkes Am-Ak-L aasea ACDV_RAT : 44- 49: lyase AtqAv-L ekpet ACDV_RAT : 210- 216: vasgq AlaAfcL tepss ACDV_RAT : 384- 389: iqekl ArmAi-L qyvte ACDV_RAT : 569- 575: llqrl AdgAidL yamvv ACD_MYCLE : 51- 55: rfpee Al-Aa-L nasgf ACD_MYCLE : 91- 95: varvd As-As-L ipavn ACD_MYCLE : 244- 248: tgfkt Al-At-L dhtrp AIDB_ECOLI : 234- 240: ahlvl AqtAggL scffv AIDB_ECOLI : 376- 381: adake AlwAr-L ftpaa CAIA_ECOLI : 284- 290: iqekf AhmAikL nsmkn IVD_CAEEL : 109- 115: tngdq AdwAcvL vntsn IVD_CAEEL : 264- 268: vsmlt Am-Ak-L kigrl IVD_HUMAN : 2- 7: m At-AtrL lgwrv IVD_HUMAN : 118- 124: eeisr AsgAvgL sygah IVD_RAT : 2- 7: m At-AvrL lgrrv IVD_RAT : 119- 125: eeisr AsaAvgL sygah R 18: 11.5102 32( 19) E-x(3,4)-L-x(3,4)-A Occurences: 32(19) ACDA_BACSU : 10- 20: lseeh EmirkLvrdfA kheva ACDA_BACSU : 293- 302: matmi EasrlLtyq-A awles ACDA_BACSU : 293- 302: matmi Easr-LltyqA awles ACDA_BACSU : 293- 303: matmi EasrlLtyqaA wless ACDA_BACSU : 306- 315: qaawl Essg-LpygkA samsk ACDB_BACSU : 291- 300: matra EaarhLvyh-A adlhn ACDB_BACSU : 291- 301: matra EaarhLvyhaA dlhnr ACDB_HUMAN : 212- 221: wissa Ehag-LflvmA nvdpt ACDB_HUMAN : 344- 353: vatql EaarlLtyn-A arlle ACDB_HUMAN : 344- 353: vatql Eaar-LltynA arlle ACDB_HUMAN : 344- 354: vatql EaarlLtynaA rllea ACDL_HUMAN : 264- 272: aelff Edir-Lpas-A llgee ACDL_HUMAN : 356- 365: clqlh Eakr-LdsatA cmaky ACDL_RAT : 84- 93: wekag EvsreLwek-A gkqgl ACDL_RAT : 264- 272: aelff Edvr-Lpas-A llgee ACDL_RAT : 356- 365: clqlh Etkr-LdsasA smaky ACDM_HUMAN : 72- 81: ydktg EypvpLirr-A welgl ACDM_MOUSE : 72- 81: ydksg EypfpLikr-A welgl ACDM_MOUSE : 331- 340: mamkv Elar-LsyqrA awevd ACDM_PIG : 37- 46: ydrtg EypvpLlkr-A welgl ACDM_PIG : 296- 305: mamkv Elar-LsyqrA aweid ACDM_RAT : 72- 81: ydksg EypfpLikr-A welgl ACDM_RAT : 331- 340: mamkv Elar-LsyqrA awevd ACDS_HUMAN : 322- 331: malal EsarlLtwr-A amlkd ACDS_HUMAN : 322- 331: malal Esar-LltwrA amlkd ACDS_HUMAN : 322- 332: malal EsarlLtwraA mlkdn ACDS_MOUSE : 322- 331: malal EsarlLtwr-A amlkd ACDS_MOUSE : 322- 331: malal Esar-LltwrA amlkd ACDS_MOUSE : 322- 332: malal EsarlLtwraA mlkdn ACDS_RAT : 322- 331: malal EsarlLtwr-A amlkd ACDS_RAT : 322- 331: malal Esar-LltwrA amlkd ACDS_RAT : 322- 332: malal EsarlLtwraA mlkdn ACDV_RAT : 50- 59: tqavl EkpetLssd-A strek ACDV_RAT : 561- 569: kgivn Eqfl-Lqrl-A dgaid ACD_MYCLE : 302- 310: mamkv Eaar-Livy-A aaara ACD_MYCLE : 302- 311: mamkv Eaar-LivyaA aarae AIDB_ECOLI : 59- 67: qlgta Esle-Lgrl-A nvnpp AIDB_ECOLI : 354- 364: malql EgqtaLlfrlA rawdr CAIA_ECOLI : 365- 374: sggsd Emqi-LtlgrA vlkqy IVD_CAEEL : 257- 266: arcqg EdvsmLtam-A klkig IVD_HUMAN : 44- 54: ingls EeqrqLrqtmA kflqe IVD_HUMAN : 45- 54: nglse Eqrq-LrqtmA kflqe IVD_HUMAN : 408- 417: gagts Evrr-LvigrA fnadf IVD_RAT : 409- 418: gggts Evrr-LvigrA fnadf S 19: 11.5102 26( 19) R-x(2,3)-A-x(3,4)-G Occurences: 26(19) ACDA_BACSU : 243- 252: tldgg RngiAaqavG iaqga ACDB_BACSU : 136- 144: dagsl Rtt-AikknG kylln ACDB_BACSU : 241- 250: nlnvg RigiAaqalG iaeaa ACDB_BACSU : 271- 278: rvqfg Rpi-Aanq-G isfkl ACDB_HUMAN : 294- 303: slneg RigiAaqmlG laqgc ACDL_HUMAN : 267- 275: ffedi Rlp-AsallG eenkg ACDL_RAT : 185- 192: dlqgv Rtn-Akrs-G sdwil ACDL_RAT : 267- 275: ffedv Rlp-AsallG eenkg ACDM_HUMAN : 281- 290: afdkt RpvvAagavG laqra ACDM_MOUSE : 281- 290: afdrt RptvAagavG laqra ACDM_PIG : 246- 255: tfdkt RppvAagavG laqra ACDM_PIG : 373- 382: taqiq RiiiArehiG ryk ACDM_RAT : 281- 290: afdrt RptvAagavG laqra ACDS_HUMAN : 272- 281: tldmg RigiAsqalG iaqta ACDS_MOUSE : 272- 281: tldmg RigiAsqalG iaqas ACDS_RAT : 272- 281: tldmg RigiAsqalG iaqas ACDV_RAT : 341- 350: ilnng RfgmAatlaG tmkai ACD_MYCLE : 147- 154: daasm Rtr-Akad-G ddwil AIDB_ECOLI : 480- 487: lqqql Rkp-Aeel-G reith CAIA_ECOLI : 41- 50: svype RfvkAladmG idsll CAIA_ECOLI : 241- 250: efdhe RflvAltnyG tamca IVD_CAEEL : 84- 91: dvsai Rth-Arry-G sdlii IVD_CAEEL : 248- 256: rslly RtvlArcq-G edvsm IVD_HUMAN : 284- 293: gldle RlvlAggplG lmqav IVD_RAT : 178- 185: dvvsm Rlk-Aekk-G dhyvl IVD_RAT : 285- 294: gldle RlvlAggplG imqav T 20: 11.5102 28( 19) A-x(1,3)-R-x-L Occurences: 28(19) ACDA_BACSU : 294- 298: atmie As--RlL tyqaa ACDB_BACSU : 290- 296: dmatr AeaaRhL vyhaa ACDB_BACSU : 292- 296: atrae Aa--RhL vyhaa ACDB_HUMAN : 5- 9: megl Av--RlL rgsrl ACDB_HUMAN : 345- 349: atqle Aa--RlL tynaa ACDB_HUMAN : 353- 357: lltyn Aa--RlL eagkp ACDL_HUMAN : 2- 6: m Aa--RlL rgslr ACDL_HUMAN : 18- 22: lgghr Ap--RqL paarc ACDL_RAT : 2- 6: m Aa--RlL lrslr ACDM_HUMAN : 292- 296: gavgl Aq--RaL deatk ACDM_MOUSE : 292- 296: gavgl Aq--RaL deatk ACDM_PIG : 257- 261: gavgl Aq--RaL deatk ACDM_RAT : 292- 296: gavgl Aq--RaL deatk ACDS_HUMAN : 13- 17: rasgp Ar--RaL cpraw ACDS_HUMAN : 21- 25: alcpr Aw--RqL htiyq ACDS_HUMAN : 199- 205: aavvf AstdRaL qnkgi ACDS_MOUSE : 346- 350: ftkes Am--RkL aasea ACDS_RAT : 19- 25: gralr ArdwRrL htvyq ACDV_RAT : 585- 589: vvlsr As--RsL segyp ACD_MYCLE : 24- 29: hnelr Ati-RaL aekei AIDB_ECOLI : 79- 84: llryd Aqg-RrL ddvrf AIDB_ECOLI : 471- 475: ryfdr Av--RrL qqqlr CAIA_ECOLI : 14- 19: qelfv Agi-ReL masen IVD_CAEEL : 241- 245: eaele At--RsL lyrtv IVD_HUMAN : 2- 8: m AtatRlL gwrva IVD_HUMAN : 4- 8: mat At--RlL gwrva IVD_RAT : 2- 8: m AtavRlL grrvs IVD_RAT : 4- 8: mat Av--RlL grrvs Number of patterns evaluated by Pratt:4120 Total running time: 7 seconds