------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 18 sequences from file ACONITASE PATTERN CONSERVATION: CM: min Nr of Seqs to Match 18 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 50 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename ACONITASE.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: ACO1_ECOLI 890 ACON_BACSU 140 ACON_BOVIN 754 ACON_CAEEL 788 ACON_LEGPN 891 ACON_PIG 781 ACON_YEAST 778 ACOX_YEAST 789 IREB_HUMAN 837 IREB_MOUSE 889 IREB_RABIT 889 LEU2_ECOLI 461 LEU2_HAEIN 468 LEU2_LACLA 460 LEU2_PHYBL 689 LEU2_RHIRA 644 LEU2_SALTY 464 LEU2_YEAST 782 Pratt run started at Thu Feb 6 18:28:24 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 12.0102 29( 18) G-x(2,3)-P-D 2: 12.0102 38( 18) A-x(0,1)-A-x-G 3: 12.0102 31( 18) A-x(1,2)-A-x-G 4: 12.0102 27( 18) L-x(2,3)-A-x(2)-A 5: 12.0102 28( 18) L-x(2,3)-A-x(4)-G 6: 12.0102 24( 18) V-x(0,1)-L-A 7: 12.0102 22( 18) A-x(3,4)-A-x(4)-A 8: 12.0102 35( 18) G-x(3,4)-V-x(3)-A 9: 12.0102 27( 18) G-x(2,3)-V-x(3)-A 10: 12.0102 25( 18) E-x(2)-A-x(2,3)-G 11: 12.0102 26( 18) V-x(3,4)-A-x(2)-G 12: 12.0102 40( 18) I-x(5)-E-x(2,3)-A 13: 12.0102 38( 18) G-x-G-x(0,1)-V 14: 12.0102 20( 18) L-x(3,4)-I-G 15: 12.0102 25( 18) T-x(1,2)-G-x-T 16: 12.0102 27( 18) T-x(2)-G-x(0,1)-T 17: 11.5102 31( 18) L-x(1,2)-D-x(1,2)-V 18: 11.5102 25( 18) V-x(0,1)-G-x(0,1)-D 19: 11.5102 27( 18) V-x(0,1)-G-x(4,5)-K 20: 11.5102 47( 18) A-x(1,2)-G-x(3,4)-D Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 17.7665 19( 18) T-x(2)-G-x(0,1)-T-x(4)-[DEGNST]-x(2)-[AGNT]-x(3)-[ADGSV] B 2: 14.6848 20( 18) G-x(2,3)-V-x(3)-A-x(4)-[AIL] C 3: 14.6278 21( 18) I-x(4)-[LPV]-E-x(2,3)-A D 4: 13.6506 21( 18) V-x(0,1)-L-A-[AEGNST] E 5: 12.0102 29( 18) G-x(2,3)-P-D F 6: 12.0102 38( 18) A-x(0,1)-A-x-G G 7: 12.0102 31( 18) A-x(1,2)-A-x-G H 8: 12.0102 27( 18) L-x(2,3)-A-x(2)-A I 9: 12.0102 28( 18) L-x(2,3)-A-x(4)-G J 10: 12.0102 22( 18) A-x(3,4)-A-x(4)-A K 11: 12.0102 35( 18) G-x(3,4)-V-x(3)-A L 12: 12.0102 25( 18) E-x(2)-A-x(2,3)-G M 13: 12.0102 26( 18) V-x(3,4)-A-x(2)-G N 14: 12.0102 38( 18) G-x-G-x(0,1)-V O 15: 12.0102 20( 18) L-x(3,4)-I-G P 16: 12.0102 25( 18) T-x(1,2)-G-x-T Q 17: 11.5102 31( 18) L-x(1,2)-D-x(1,2)-V R 18: 11.5102 25( 18) V-x(0,1)-G-x(0,1)-D S 19: 11.5102 27( 18) V-x(0,1)-G-x(4,5)-K T 20: 11.5102 47( 18) A-x(1,2)-G-x(3,4)-D Best patterns with alignements: fitness hits(seqs) Pattern A 1: 17.7665 19( 18) T-x(2)-G-x(0,1)-T-x(4)-[DEGNST]-x(2)-[AGNT]-x(3)-[ADGSV] Occurences: 19(18) ACO1_ECOLI : 206- 222: iaypd TlvG-TdshtTmiNglgV lgwgv ACON_BACSU : 19- 36: arktf TtnGkTyhyySlkAledS gigkv ACON_BOVIN : 229- 246: vagil TvkGgTgaivEyhGpgvD sisct ACON_CAEEL : 264- 281: vadil TvkGgTgaivEyfGpgvD sisat ACON_LEGPN : 209- 225: yaypd TlvG-TdshtTmiNglgV lgwgv ACON_PIG : 256- 273: vagil TvkGgTgaivEyhGpgvD sisct ACON_YEAST : 252- 269: lagit TvkGgTgkivEyfGdgvD tfsat ACOX_YEAST : 253- 270: lagll TvrGgTgyivEyfGegvS tlsct IREB_HUMAN : 645- 662: aaryl TnrGlTprefNsyGspeV mtpsw IREB_MOUSE : 697- 714: aaryl TnrGlTprefNsyGsrrG ndaim IREB_RABIT : 697- 714: aaryl TnrGlTprefNsyGsrrG ndaim LEU2_ECOLI : 117- 134: peqgv TlpGmTivcgDshTathG afgal LEU2_HAEIN : 117- 134: peqgl TlpGmTivcgDshTathG afgal LEU2_LACLA : 118- 135: pesgr TqpGkTivcgDshTatnG afgai LEU2_PHYBL : 112- 129: peqgf TlpGtTvvcgDshTsthG afgal LEU2_PHYBL : 187- 203: iglig TagG-TrcviEfcGsaiA slsme LEU2_RHIRA : 246- 262: igvig TagG-TgcviEfcGdtiA alsme LEU2_SALTY : 117- 134: peqgv TlpGmTivcgDshTathG afgal LEU2_YEAST : 131- 148: peegf TlpGtTvvcgDshTsthG afgsl B 2: 14.6848 20( 18) G-x(2,3)-V-x(3)-A-x(4)-[AIL] Occurences: 20(18) ACO1_ECOLI : 92- 105: mqdft GvpaVvdlAamreA vkrlg ACON_BACSU : 99- 112: lqdft GvpaVvdlAslrkA maavg ACON_BOVIN : 413- 425: vlrdv Ggi-VlanAcgpcI gqwdr ACON_CAEEL : 448- 460: ifadf Ggm-VlanAcgpcI gqwdr ACON_LEGPN : 95- 108: mqdft GvpaVvdlAamrtA ivkmg ACON_PIG : 440- 452: vlrdv Ggi-VlanAcgpcI gqwdr ACON_YEAST : 437- 449: tfkef Ggi-VlanAcgpcI gqwdr ACOX_YEAST : 440- 452: ifqen Gak-VlanAcgpcI gqwnr IREB_HUMAN : 38- 51: lqdft GvpaVvdfAamrdA vkklg IREB_MOUSE : 90- 103: lqdft GvpaVvdfAamrdA vkklg IREB_RABIT : 90- 103: lqdft GvpsVvdfAamrdA vkklg LEU2_ECOLI : 376- 389: alvvp GsgpVkaqAeaegL dkifi LEU2_HAEIN : 214- 227: dlsme GrmtVcnmAiemgA kagli LEU2_HAEIN : 378- 391: ilvvp GsglVkeqAekegL dkifi LEU2_LACLA : 370- 383: givvp GsrpVkeaAeaqgL dkifk LEU2_PHYBL : 372- 385: amvvp GsglVkrqAeregL dkvft LEU2_PHYBL : 503- 515: dcppa Gsp-VnkgApvasA mpaft LEU2_RHIRA : 431- 444: amvvp GsglVkrqAeregL dkift LEU2_SALTY : 376- 389: alvvp GsgpVkaqAeaegL dkifi LEU2_YEAST : 395- 408: amvvp GsglVkkqAeaegL dkifq C 3: 14.6278 21( 18) I-x(4)-[LPV]-E-x(2,3)-A Occurences: 21(18) ACO1_ECOLI : 302- 311: adrat IanmsPEyg-A tcgff ACON_BACSU : 64- 73: vdgfv IkkehVEnl-A kwgta ACON_BOVIN : 146- 155: pgsgi IhqiiLEny-A ypgvl ACON_CAEEL : 181- 190: pgsgi IhqiiLEny-A fpgll ACON_LEGPN : 305- 314: adrat IsnmaPEyg-A tcgff ACON_PIG : 173- 182: pgsgi IhqiiLEny-A ypgvl ACON_YEAST : 169- 178: pgsgi IhqivLEny-A fpgal ACOX_YEAST : 170- 180: pgsgi IhqivLEnfsA pglmm IREB_HUMAN : 125- 134: pgsgi IhqvnLEyl-A rvvfd IREB_HUMAN : 244- 253: adrat IanmcPEyg-A taaff IREB_MOUSE : 177- 186: pgsgi IhqvnLEyl-A rvvfd IREB_MOUSE : 296- 305: adrat IanmcPEyg-A taaff IREB_RABIT : 177- 186: pgsgi IhqvnLEyl-A rvvfd IREB_RABIT : 296- 305: adrat IanmcPEyg-A tatff LEU2_ECOLI : 143- 153: alafg IgtseVEhvlA tqtlk LEU2_HAEIN : 143- 153: alafg IgtseVEhvlA tqtlk LEU2_LACLA : 144- 154: aiafg IgtseVEhvlA tqtiw LEU2_PHYBL : 138- 148: alafg IgtseVEhvlA tqtll LEU2_RHIRA : 197- 207: alafg IgtseVEhvlA tqtll LEU2_SALTY : 143- 153: alafg IgtseVEhvlA tqtlk LEU2_YEAST : 157- 167: slafg IgtseVEhvlA tqtii D 4: 13.6506 21( 18) V-x(0,1)-L-A-[AEGNST] Occurences: 21(18) ACO1_ECOLI : 97- 101: gvpav VdLAA mreav ACON_BACSU : 104- 108: gvpav VdLAS lrkam ACON_BOVIN : 416- 419: dvggi V-LAN acgpc ACON_CAEEL : 451- 454: dfggm V-LAN acgpc ACON_LEGPN : 100- 104: gvpav VdLAA mrtai ACON_PIG : 443- 446: dvggi V-LAN acgpc ACON_YEAST : 440- 443: efggi V-LAN acgpc ACOX_YEAST : 443- 446: engak V-LAN acgpc IREB_HUMAN : 716- 719: glpli V-LAG keyga IREB_HUMAN : 743- 746: lgika V-LAE syeri IREB_MOUSE : 768- 771: glpli V-LAG keygs IREB_MOUSE : 795- 798: lgika V-LAE syeri IREB_RABIT : 768- 771: ghpli V-LAG keygs IREB_RABIT : 795- 798: lgika V-LAE syeri LEU2_ECOLI : 151- 154: seveh V-LAT qtlkq LEU2_HAEIN : 151- 154: seveh V-LAT qtlkq LEU2_LACLA : 152- 155: seveh V-LAT qtiwq LEU2_PHYBL : 146- 149: seveh V-LAT qtllq LEU2_RHIRA : 205- 208: seveh V-LAT qtllq LEU2_SALTY : 151- 154: seveh V-LAT qtlkq LEU2_YEAST : 165- 168: seveh V-LAT qtiiq E 5: 12.0102 29( 18) G-x(2,3)-P-D Occurences: 29(18) ACO1_ECOLI : 508- 512: cigns Gpl-PD pieta ACO1_ECOLI : 680- 685: hispa GsikPD spagr ACON_BACSU : 117- 121: amaav Gvd-PD kinpe ACON_BOVIN : 324- 329: kphin GpftPD lahpv ACON_BOVIN : 614- 618: vtqef Gpv-PD taryy ACON_CAEEL : 359- 364: tphvn GpftPD lassi ACON_LEGPN : 509- 513: cigns Gpl-PD dishc ACON_PIG : 351- 356: kphin GpftPD lahpv ACON_PIG : 641- 645: vtqef Gpv-PD taryy ACON_YEAST : 348- 353: epyin GpftPD latpv ACOX_YEAST : 351- 356: ephvn GpftPD lstpi IREB_HUMAN : 142- 147: vfdqd GyyyPD slvgt IREB_MOUSE : 194- 199: vfdqd GcyyPD slvgt IREB_RABIT : 194- 199: vfdqd GyyyPD slvgt LEU2_ECOLI : 230- 235: mgaka GlvaPD ettfn LEU2_HAEIN : 230- 235: mgaka GliaPD ettfa LEU2_LACLA : 231- 236: fgaki GlmnPD ektyd LEU2_LACLA : 404- 408: csacl Gmn-PD qipey LEU2_PHYBL : 225- 230: ggara GmiaPD eitfe LEU2_PHYBL : 406- 410: csmcl Gmn-PD qlspg LEU2_PHYBL : 568- 573: ydpat GaekPD fvlnq LEU2_RHIRA : 284- 289: agara GmvaPD evtfe LEU2_RHIRA : 355- 359: vvpit Gst-PD pakie LEU2_RHIRA : 465- 469: csmcl Gmn-PD qlkpg LEU2_RHIRA : 620- 625: fdpat GaenPD fvlnl LEU2_SALTY : 230- 235: mgaka GlvaPD ettfn LEU2_YEAST : 244- 249: agara GmikPD ettfq LEU2_YEAST : 318- 322: alpit Gsv-PD pknvt LEU2_YEAST : 429- 433: csmcl Gmn-PD ilday F 6: 12.0102 38( 18) A-x(0,1)-A-x-G Occurences: 38(18) ACO1_ECOLI : 343- 347: lveky AkAqG mwrnp ACO1_ECOLI : 780- 783: ssrdw A-AkG prllg ACON_BACSU : 114- 117: lrkam A-AvG vdpdk ACON_BOVIN : 376- 380: avakq AlAhG lkcks ACON_BOVIN : 418- 422: ggivl AnAcG pcigq ACON_CAEEL : 453- 457: ggmvl AnAcG pcigq ACON_CAEEL : 524- 527: tdelt A-AdG skfkl ACON_LEGPN : 346- 350: lveay AkAqG mwydk ACON_LEGPN : 781- 784: ssrdw A-AkG tnllg ACON_PIG : 403- 407: avakq AlAhG lkcks ACON_PIG : 445- 449: ggivl AnAcG pcigq ACON_YEAST : 400- 404: sivkd AaAhG lkskt ACON_YEAST : 401- 404: ivkda A-AhG lkskt ACON_YEAST : 442- 446: ggivl AnAcG pcigq ACOX_YEAST : 200- 204: agglg AiAiG vggad ACOX_YEAST : 445- 449: gakvl AnAcG pcigq IREB_HUMAN : 731- 734: ssrdw A-AkG pfllg IREB_HUMAN : 772- 776: lpgen AdAlG ltgqe IREB_MOUSE : 783- 786: ssrdw A-AkG pfllg IREB_RABIT : 783- 786: ssrdw A-AkG pfllg LEU2_ECOLI : 138- 142: hgafg AlAfG igtse LEU2_ECOLI : 173- 176: evqgk A-ApG itakd LEU2_ECOLI : 384- 388: pvkaq AeAeG ldkif LEU2_HAEIN : 138- 142: hgafg AlAfG igtse LEU2_HAEIN : 450- 454: vspam AaAaG vfgkf LEU2_HAEIN : 451- 454: spama A-AaG vfgkf LEU2_LACLA : 139- 143: ngafg AiAfG igtse LEU2_LACLA : 378- 382: pvkea AeAqG ldkif LEU2_PHYBL : 133- 137: hgafg AlAfG igtse LEU2_RHIRA : 192- 196: hgafg AlAfG igtse LEU2_RHIRA : 503- 507: vspam AaAaG ikgcl LEU2_RHIRA : 504- 507: spama A-AaG ikgcl LEU2_SALTY : 138- 142: hgafg AlAfG igtse LEU2_SALTY : 173- 176: evtgn A-ApG itakd LEU2_SALTY : 384- 388: pvkaq AeAeG ldkif LEU2_YEAST : 403- 407: lvkkq AeAeG ldkif LEU2_YEAST : 467- 471: ispam AaAaG iaghf LEU2_YEAST : 468- 471: spama A-AaG iaghf G 7: 12.0102 31( 18) A-x(1,2)-A-x-G Occurences: 31(18) ACO1_ECOLI : 343- 347: lveky Ak-AqG mwrnp ACO1_ECOLI : 466- 471: qpwvk AslApG skvvs ACON_BACSU : 112- 117: aslrk AmaAvG vdpdk ACON_BOVIN : 376- 380: avakq Al-AhG lkcks ACON_BOVIN : 418- 422: ggivl An-AcG pcigq ACON_CAEEL : 453- 457: ggmvl An-AcG pcigq ACON_LEGPN : 346- 350: lveay Ak-AqG mwydk ACON_PIG : 403- 407: avakq Al-AhG lkcks ACON_PIG : 445- 449: ggivl An-AcG pcigq ACON_YEAST : 400- 404: sivkd Aa-AhG lkskt ACON_YEAST : 442- 446: ggivl An-AcG pcigq ACON_YEAST : 727- 732: dilgl AelApG kpvtm ACOX_YEAST : 200- 204: agglg Ai-AiG vggad ACOX_YEAST : 445- 449: gakvl An-AcG pcigq IREB_HUMAN : 772- 776: lpgen Ad-AlG ltgqe IREB_MOUSE : 717- 722: rrgnd AimArG tfani IREB_RABIT : 717- 722: rrgnd AimArG tfani LEU2_ECOLI : 138- 142: hgafg Al-AfG igtse LEU2_ECOLI : 384- 388: pvkaq Ae-AeG ldkif LEU2_HAEIN : 138- 142: hgafg Al-AfG igtse LEU2_HAEIN : 450- 454: vspam Aa-AaG vfgkf LEU2_LACLA : 139- 143: ngafg Ai-AfG igtse LEU2_LACLA : 377- 382: rpvke AaeAqG ldkif LEU2_LACLA : 378- 382: pvkea Ae-AqG ldkif LEU2_PHYBL : 133- 137: hgafg Al-AfG igtse LEU2_RHIRA : 192- 196: hgafg Al-AfG igtse LEU2_RHIRA : 503- 507: vspam Aa-AaG ikgcl LEU2_SALTY : 138- 142: hgafg Al-AfG igtse LEU2_SALTY : 384- 388: pvkaq Ae-AeG ldkif LEU2_YEAST : 403- 407: lvkkq Ae-AeG ldkif LEU2_YEAST : 467- 471: ispam Aa-AaG iaghf H 8: 12.0102 27( 18) L-x(2,3)-A-x(2)-A Occurences: 27(18) ACO1_ECOLI : 294- 300: dglds Lpl-AdrA tianm ACO1_ECOLI : 296- 303: ldslp LadrAtiA nmspe ACON_BACSU : 109- 115: vdlas Lrk-AmaA vgvdp ACON_BOVIN : 680- 686: qgllp Ltf-AdpA dynki ACON_CAEEL : 622- 629: nisnn LfltAinA dngem ACON_CAEEL : 712- 718: qgmlp Ltf-AnpA dydki ACON_LEGPN : 297- 303: pglnd Lpl-AdrA tisnm ACON_PIG : 26- 33: hvasv LcqrAkvA mshfe ACON_PIG : 707- 713: qgllp Ltf-AdpA dynki ACON_YEAST : 724- 730: dridi Lgl-AelA pgkpv ACOX_YEAST : 399- 406: srvvd LvkqAskA glkpr IREB_HUMAN : 236- 242: pgvaq Lsi-AdrA tianm IREB_HUMAN : 400- 407: lgagl LakkAvdA glnvm IREB_HUMAN : 738- 745: kgpfl LgikAvlA esyer IREB_MOUSE : 288- 294: pgvaq Lsi-AdrA tianm IREB_MOUSE : 452- 459: lgagl LakkAveA glsvk IREB_MOUSE : 790- 797: kgpfl LgikAvlA esyer IREB_RABIT : 288- 294: lgvaq Lsi-AdrA tianm IREB_RABIT : 452- 459: lgagl LakkAvdA glnvk IREB_RABIT : 790- 797: kgpfl LgikAvlA esyer LEU2_ECOLI : 442- 449: ggrth LvspAmaA vtghf LEU2_HAEIN : 444- 451: ngrth LvspAmaA aagvf LEU2_LACLA : 436- 443: narth LcspAmaA aaaia LEU2_PHYBL : 438- 445: ggrth LmspAmaA aaair LEU2_RHIRA : 497- 504: ggrth LvspAmaA aagik LEU2_SALTY : 442- 449: ggrth LvspAmaA aaavt LEU2_YEAST : 461- 468: lsrth LispAmaA aagia I 9: 12.0102 28( 18) L-x(2,3)-A-x(4)-G Occurences: 28(18) ACO1_ECOLI : 24- 32: yhyys Lpl-AakslG ditrl ACO1_ECOLI : 553- 561: laspp Lvv-AyalaG nmnin ACO1_ECOLI : 763- 772: qeqtp LaviAgkeyG sgssr ACON_BACSU : 109- 117: vdlas Lrk-AmaavG vdpdk ACON_BOVIN : 127- 135: evynf Lat-AgakyG vgfwr ACON_BOVIN : 505- 513: pdade Lpr-AefdpG qdtyq ACON_CAEEL : 162- 170: evfnf Lat-AgskyG vgfwk ACON_LEGPN : 554- 562: laspp Lvv-AyalcG ttcsd ACON_LEGPN : 764- 773: enqqd LviiAgkeyG tgssr ACON_PIG : 154- 162: evynf Lat-AgakyG vgfwr ACON_PIG : 532- 540: pdade Lpr-AefdpG qdtyq ACON_YEAST : 197- 206: pnagg LgqlAigvgG adavd ACON_YEAST : 492- 500: vaspe Lvt-AfaiaG dlrfn ACON_YEAST : 724- 732: dridi Lgl-AelapG kpvtm ACOX_YEAST : 198- 207: pnagg LgaiAigvgG adavd IREB_HUMAN : 504- 512: laspp Lvi-AyaiaG tirid IREB_HUMAN : 714- 723: qaglp LivlAgkeyG agssr IREB_MOUSE : 556- 564: laspp Lvi-AyaiaG tvrid IREB_MOUSE : 766- 775: qaglp LivlAgkeyG sgssr IREB_RABIT : 556- 564: laspp Lvi-AyaiaG tirid IREB_RABIT : 766- 775: qeghp LivlAgkeyG sgssr LEU2_ECOLI : 353- 362: sried LraaAeivkG rkvap LEU2_HAEIN : 354- 363: sried LraaAavmkG rkkad LEU2_LACLA : 347- 355: arlgd Lee-AakiiG drhia LEU2_PHYBL : 349- 358: sried LrsaAsivkG khiad LEU2_RHIRA : 408- 417: sried LraaAavvkG kraae LEU2_SALTY : 354- 363: sried LrapAevgkG pklpg LEU2_YEAST : 371- 380: gried LrsaAavvrG qklas J 10: 12.0102 22( 18) A-x(3,4)-A-x(4)-A Occurences: 22(18) ACO1_ECOLI : 95- 105: ftgvp AvvdlAamreA vkrlg ACON_BACSU : 102- 112: ftgvp AvvdlAslrkA maavg ACON_BOVIN : 70- 79: rpdrv Amqd-AtaqmA mlqfi ACON_CAEEL : 105- 114: rpdrv Amqd-AtaqmA mlqfi ACON_CAEEL : 647- 657: tgeyg AvpatArkykA dgvrw ACON_LEGPN : 98- 108: ftgvp AvvdlAamrtA ivkmg ACON_PIG : 97- 106: rpdrv Amqd-AtaqmA mlqfi ACON_YEAST : 93- 102: rpdrv Acqd-AtaqmA ilqfm ACOX_YEAST : 94- 103: npdrv Amqd-AsaqmA llqfm ACOX_YEAST : 306- 315: krylq Atnr-AevaeA adval IREB_HUMAN : 41- 51: ftgvp AvvdfAamrdA vkklg IREB_HUMAN : 631- 640: dhisp Agni-ArnspA arylt IREB_MOUSE : 93- 103: ftgvp AvvdfAamrdA vkklg IREB_MOUSE : 683- 692: dhisp Agni-ArnspA arylt IREB_RABIT : 683- 692: dhisp Agni-ArnspA arylt LEU2_ECOLI : 131- 140: gdsht Athg-AfgalA fgigt LEU2_HAEIN : 131- 140: gdsht Athg-AfgalA fgigt LEU2_LACLA : 132- 141: gdsht Atng-AfgaiA fgigt LEU2_PHYBL : 243- 252: rgrpl Apeg-AewdkA vqywk LEU2_RHIRA : 302- 311: rdkpl Apkg-AdwdrA vkywk LEU2_SALTY : 131- 140: gdsht Athg-AfgalA fgigt LEU2_YEAST : 262- 271: kgrpl Apkg-AewekA vaywk K 11: 12.0102 35( 18) G-x(3,4)-V-x(3)-A Occurences: 35(18) ACO1_ECOLI : 92- 100: mqdft Gvpa-VvdlA amrea ACO1_ECOLI : 92- 101: mqdft GvpavVdlaA mreav ACON_BACSU : 99- 107: lqdft Gvpa-VvdlA slrka ACON_BOVIN : 182- 191: icigv GgadaVdvmA gipwe ACON_BOVIN : 183- 191: cigvg Gada-VdvmA gipwe ACON_BOVIN : 367- 376: syedm GrsaaVakqA lahgl ACON_CAEEL : 217- 226: lcigv GgadaVdvmA dipwe ACON_CAEEL : 218- 226: cigvg Gada-VdvmA dipwe ACON_CAEEL : 643- 652: knqvt GeygaVpatA rkyka ACON_CAEEL : 688- 697: prhlg GraiiVksfA rihet ACON_LEGPN : 95- 103: mqdft Gvpa-VvdlA amrta ACON_LEGPN : 95- 104: mqdft GvpavVdlaA mrtai ACON_PIG : 209- 218: icigv GgadaVdvmA gipwe ACON_PIG : 210- 218: cigvg Gada-VdvmA gipwe ACON_PIG : 394- 403: syedm GrsaaVakqA lahgl ACON_YEAST : 205- 214: laigv GgadaVdvmA grpwe ACON_YEAST : 206- 214: aigvg Gada-VdvmA grpwe ACON_YEAST : 635- 644: knvyt GeykgVpdtA rdyrd ACOX_YEAST : 685- 694: prflg GeillVksfA rihet IREB_HUMAN : 38- 46: lqdft Gvpa-VvdfA amrda IREB_HUMAN : 38- 47: lqdft GvpavVdfaA mrdav IREB_HUMAN : 695- 704: ihlps GeildVfdaA eryqq IREB_MOUSE : 90- 98: lqdft Gvpa-VvdfA amrda IREB_MOUSE : 90- 99: lqdft GvpavVdfaA mrdav IREB_MOUSE : 747- 756: vhlps GetldVfdaA eryqq IREB_RABIT : 90- 98: lqdft Gvps-VvdfA amrda IREB_RABIT : 90- 99: lqdft GvpsvVdfaA mrdav IREB_RABIT : 747- 756: ihlps GetldVfdaA eryqq LEU2_ECOLI : 376- 384: alvvp Gsgp-VkaqA eaegl LEU2_HAEIN : 214- 222: dlsme Grmt-VcnmA iemga LEU2_HAEIN : 378- 386: ilvvp Gsgl-VkeqA ekegl LEU2_LACLA : 104- 112: thggk Gqgi-VhmvA pesgr LEU2_LACLA : 370- 378: givvp Gsrp-VkeaA eaqgl LEU2_PHYBL : 372- 380: amvvp Gsgl-VkrqA eregl LEU2_PHYBL : 384- 392: qaere Gldk-VftdA gfdwr LEU2_RHIRA : 431- 439: amvvp Gsgl-VkrqA eregl LEU2_SALTY : 376- 384: alvvp Gsgp-VkaqA eaegl LEU2_YEAST : 208- 217: ligta GgtgcViefA geaie LEU2_YEAST : 209- 217: igtag Gtgc-ViefA geaie LEU2_YEAST : 395- 403: amvvp Gsgl-VkkqA eaegl L 12: 12.0102 25( 18) E-x(2)-A-x(2,3)-G Occurences: 25(18) ACO1_ECOLI : 231- 238: gvggi EaeAamlG qpvsm ACO1_ECOLI : 308- 314: anmsp EygAtc-G ffpid ACO1_ECOLI : 340- 347: qvelv EkyAkaqG mwrnp ACO1_ECOLI : 614- 621: yaevf EgtAewkG invtr ACON_BACSU : 70- 76: kkehv EnlAkw-G taelk ACON_BOVIN : 152- 158: hqiil EnyAyp-G vllig ACON_CAEEL : 187- 193: hqiil EnyAfp-G lllig ACON_CAEEL : 521- 527: npltd EltAad-G skfkl ACON_LEGPN : 234- 241: gvggi EaeAamlG qpvsm ACON_LEGPN : 311- 317: snmap EygAtc-G ffpvd ACON_LEGPN : 343- 350: tialv EayAkaqG mwydk ACON_PIG : 179- 185: hqiil EnyAyp-G vllig ACON_YEAST : 175- 181: hqivl EnyAfp-G aliig ACOX_YEAST : 152- 159: vfdfl EscAkryG iqfwg IREB_HUMAN : 173- 180: gvggi EaeAvmlG qpism IREB_MOUSE : 225- 232: gvggi EaeAvmlG qpism IREB_RABIT : 225- 232: gvggi EaeAvmlG qpism LEU2_ECOLI : 224- 230: cnmai EmgAka-G lvapd LEU2_HAEIN : 224- 230: cnmai EmgAka-G liapd LEU2_LACLA : 225- 231: cnmsi EfgAki-G lmnpd LEU2_LACLA : 348- 355: rlgdl EeaAkiiG drhia LEU2_PHYBL : 219- 225: cnmsi EggAra-G miapd LEU2_RHIRA : 278- 284: cnmsi EagAra-G mvapd LEU2_SALTY : 224- 230: cnmai EmgAka-G lvapd LEU2_YEAST : 238- 244: cnmai EagAra-G mikpd M 13: 12.0102 26( 18) V-x(3,4)-A-x(2)-G Occurences: 26(18) ACO1_ECOLI : 554- 561: asppl Vvay-AlaG nmnin ACON_BACSU : 69- 76: ikkeh Venl-AkwG taelk ACON_BOVIN : 123- 131: dinqe VynflAtaG akygv ACON_BOVIN : 469- 476: tspei Vtal-AiaG tlkfn ACON_CAEEL : 158- 166: dlnke VfnflAtaG skygv ACON_LEGPN : 555- 562: asppl Vvay-AlcG ttcsd ACON_PIG : 150- 158: dinqe VynflAtaG akygv ACON_PIG : 496- 503: tspei Vtal-AiaG tlkfn ACON_YEAST : 173- 181: iihqi VlenyAfpG aliig ACON_YEAST : 397- 404: rsasi Vkda-AahG lkskt ACON_YEAST : 493- 500: aspel Vtaf-AiaG dlrfn ACOX_YEAST : 732- 739: etlnl Vdmi-AkdG nngge IREB_HUMAN : 505- 512: asppl Viay-AiaG tirid IREB_MOUSE : 557- 564: asppl Viay-AiaG tvrid IREB_RABIT : 557- 564: asppl Viay-AiaG tirid LEU2_ECOLI : 34- 42: hlvhe VtspqAfdG lrahg LEU2_ECOLI : 169- 176: tmkie Vqgk-AapG itakd LEU2_HAEIN : 34- 42: hlihe VtspqAfdG lrvan LEU2_LACLA : 36- 44: hvihe VtspqAfqG lreag LEU2_PHYBL : 23- 31: hlvhe VtspqAfeG lrnas LEU2_PHYBL : 331- 339: tplee VkidkAfiG sctns LEU2_RHIRA : 82- 90: hlvhe VtspqAfeG lrnan LEU2_RHIRA : 223- 230: nmrir Vqgk-AlpG vtskd LEU2_SALTY : 34- 42: hlvhe VtspqAfdG lrahp LEU2_SALTY : 169- 176: tmkie Vtgn-AapG itakd LEU2_YEAST : 42- 50: hlvhe VtspqAfeG lenag N 14: 12.0102 38( 18) G-x-G-x(0,1)-V Occurences: 38(18) ACO1_ECOLI : 219- 222: ttmin GlG-V lgwgv ACO1_ECOLI : 224- 227: glgvl GwG-V ggiea ACO1_ECOLI : 694- 697: grylq GrG-V erkdf ACON_BACSU : 37- 41: aleds GiGkV sklpy ACON_BOVIN : 242- 245: iveyh GpG-V dsisc ACON_CAEEL : 277- 280: iveyf GpG-V dsisa ACON_CAEEL : 557- 561: fqaps GsGqV dvsps ACON_LEGPN : 222- 225: ttmin GlG-V lgwgv ACON_LEGPN : 227- 230: glgvl GwG-V ggiea ACON_PIG : 269- 272: iveyh GpG-V dsisc ACON_YEAST : 265- 268: iveyf GdG-V dtfsa ACOX_YEAST : 266- 269: iveyf GeG-V stlsc IREB_HUMAN : 166- 169: glgil GwG-V ggiea IREB_HUMAN : 230- 233: fveff GpG-V aqlsi IREB_HUMAN : 422- 425: tslsp GsG-V vtyyl IREB_HUMAN : 422- 426: tslsp GsGvV tyylq IREB_HUMAN : 758- 761: rsnlv GmG-V ipley IREB_MOUSE : 213- 216: ttmid GlG-V lgwgv IREB_MOUSE : 218- 221: glgvl GwG-V ggiea IREB_MOUSE : 282- 285: fveff GpG-V aqlsi IREB_MOUSE : 474- 477: tslsp GsG-V vtyyl IREB_MOUSE : 474- 478: tslsp GsGvV tyylr IREB_MOUSE : 810- 813: rsnlv GmG-V ipley IREB_RABIT : 213- 216: ttmid GlG-V lgwgv IREB_RABIT : 218- 221: glgvl GwG-V ggiea IREB_RABIT : 282- 285: fveff GlG-V aqlsi IREB_RABIT : 474- 477: tslsp GsG-V vtyyl IREB_RABIT : 474- 478: tslsp GsGvV tyylr IREB_RABIT : 810- 813: rsnlv GmG-V ipley LEU2_ECOLI : 195- 199: tgsag GtGhV vefcg LEU2_ECOLI : 376- 380: alvvp GsGpV kaqae LEU2_HAEIN : 195- 199: ttmag GtGhV vefcg LEU2_HAEIN : 378- 382: ilvvp GsGlV keqae LEU2_LACLA : 104- 108: thggk GqGiV hmvap LEU2_PHYBL : 372- 376: amvvp GsGlV krqae LEU2_RHIRA : 249- 253: igtag GtGcV iefcg LEU2_RHIRA : 431- 435: amvvp GsGlV krqae LEU2_SALTY : 195- 199: tgsag GtGhV vefcg LEU2_SALTY : 376- 380: alvvp GsGpV kaqae LEU2_YEAST : 209- 213: igtag GtGcV iefag LEU2_YEAST : 395- 399: amvvp GsGlV kkqae O 15: 12.0102 20( 18) L-x(3,4)-I-G Occurences: 20(18) ACO1_ECOLI : 567- 573: nmnin LasepIG hdrkg ACON_BACSU : 33- 39: yslka LedsgIG kvskl ACON_BOVIN : 174- 180: pnggg LggicIG vggad ACON_CAEEL : 209- 215: pnggg LgglcIG vggad ACON_LEGPN : 247- 253: qpvsm LipevIG fklsg ACON_LEGPN : 568- 574: ttcsd LsrepIG qdkeg ACON_PIG : 201- 207: pnggg LggicIG vggad ACON_YEAST : 197- 203: pnagg LgqlaIG vggad ACOX_YEAST : 198- 204: pnagg LgaiaIG vggad IREB_HUMAN : 187- 192: pismv Lpqv-IG yrlmg IREB_MOUSE : 239- 244: pismv Lpqv-IG yklmg IREB_RABIT : 239- 244: pismv Lpqv-IG yrlmg LEU2_ECOLI : 139- 144: gafga Lafg-IG tseve LEU2_HAEIN : 139- 144: gafga Lafg-IG tseve LEU2_LACLA : 331- 337: asdid LgyifIG sctna LEU2_PHYBL : 134- 139: gafga Lafg-IG tseve LEU2_RHIRA : 193- 198: gafga Lafg-IG tseve LEU2_SALTY : 139- 144: gafga Lafg-IG tseve LEU2_YEAST : 153- 158: gafgs Lafg-IG tseve LEU2_YEAST : 196- 202: itskd LilyiIG ligta P 16: 12.0102 25( 18) T-x(1,2)-G-x-T Occurences: 25(18) ACO1_ECOLI : 823- 827: gvtrk Tl-GlT geeki ACON_BACSU : 19- 24: arktf TtnGkT yhyys ACON_BACSU : 20- 24: rktft Tn-GkT yhyys ACON_BOVIN : 229- 234: vagil TvkGgT gaive ACON_CAEEL : 264- 269: vadil TvkGgT gaive ACON_LEGPN : 15- 20: tksql TvdGkT ynyys ACON_LEGPN : 625- 630: wqaiq TssGqT yewnp ACON_PIG : 256- 261: vagil TvkGgT gaive ACON_YEAST : 252- 257: lagit TvkGgT gkive ACOX_YEAST : 253- 258: lagll TvrGgT gyive IREB_HUMAN : 645- 650: aaryl TnrGlT prefn IREB_MOUSE : 697- 702: aaryl TnrGlT prefn IREB_RABIT : 697- 702: aaryl TnrGlT prefn LEU2_ECOLI : 117- 122: peqgv TlpGmT ivcgd LEU2_HAEIN : 117- 122: peqgl TlpGmT ivcgd LEU2_HAEIN : 191- 196: iigkt TmaGgT ghvve LEU2_LACLA : 118- 123: pesgr TqpGkT ivcgd LEU2_PHYBL : 112- 117: peqgf TlpGtT vvcgd LEU2_PHYBL : 169- 173: vegel Tp-GvT skdva LEU2_PHYBL : 187- 191: iglig Ta-GgT rcvie LEU2_RHIRA : 246- 250: igvig Ta-GgT gcvie LEU2_SALTY : 117- 122: peqgv TlpGmT ivcgd LEU2_SALTY : 266- 271: wktlk TddGaT fdtvv LEU2_YEAST : 131- 136: peegf TlpGtT vvcgd LEU2_YEAST : 206- 210: iglig Ta-GgT gcvie Q 17: 11.5102 31( 18) L-x(1,2)-D-x(1,2)-V Occurences: 31(18) ACO1_ECOLI : 124- 130: lspvd LviDhsV tvdrf ACO1_ECOLI : 244- 249: qpvsm LipDv-V gfklt ACO1_ECOLI : 421- 426: ghqyq Lp-DgaV viaai ACO1_ECOLI : 667- 671: rilam Lg-Ds-V ttdhi ACO1_ECOLI : 741- 746: gmtrh Lp-DsdV vsiyd ACON_BACSU : 80- 85: wgtae Lk-DidV pfkps ACON_BACSU : 131- 137: eipvd LviDhsV qvd ACON_BOVIN : 64- 69: ktylr LrpDr-V amqda ACON_CAEEL : 99- 104: vsylr LrpDr-V amqda ACON_LEGPN : 127- 133: lspvd LviDhsV mvdkf ACON_PIG : 91- 96: ktylr LrpDr-V amqda ACON_YEAST : 22- 28: atvsn LtrDskV nqnll ACON_YEAST : 87- 92: vsylk LrpDr-V acqda ACOX_YEAST : 88- 93: nkylk LnpDr-V amqda IREB_HUMAN : 442- 447: pylsq LgfDv-V gygcm IREB_HUMAN : 619- 623: yvlln Lg-Ds-V ttdhi IREB_MOUSE : 494- 499: pylsq LgfDv-V gygcm IREB_MOUSE : 671- 675: yvlln Lg-Ds-V ttdhi IREB_RABIT : 494- 499: pylsq LgfDv-V gygcm IREB_RABIT : 671- 675: yvlln Lg-Ds-V ttdhi LEU2_ECOLI : 8- 13: tlyek Lf-DahV vyeae LEU2_HAEIN : 333- 338: eagtn Lk-DikV dqvfi LEU2_LACLA : 10- 15: tifdk Lw-DqhV iagne LEU2_LACLA : 26- 32: gepql LyiDlhV ihevt LEU2_PHYBL : 5- 9: msrt Ly-Dk-V wddhv LEU2_RHIRA : 52- 56: qnvst Ly-Dk-V wddhv LEU2_SALTY : 8- 13: tlyek Lf-DahV vfeap LEU2_YEAST : 12- 16: kgprt Ly-Dk-V fdahv LEU2_YEAST : 529- 534: iande Lk-DipV ksddt LEU2_YEAST : 701- 707: pnqki LdsDgnV lvdhf LEU2_YEAST : 760- 765: ggskl LkfDn-V pkrka R 18: 11.5102 25( 18) V-x(0,1)-G-x(0,1)-D Occurences: 25(18) ACO1_ECOLI : 208- 211: ypdtl V-GtD shttm ACON_BACSU : 116- 119: kamaa V-GvD pdkin ACON_BOVIN : 181- 185: gicig VgGaD avdvm ACON_BOVIN : 632- 635: girwv ViG-D enyge ACON_CAEEL : 216- 220: glcig VgGaD avdvm ACON_LEGPN : 3- 6: mk V-GqD slstk ACON_LEGPN : 211- 214: ypdtl V-GtD shttm ACON_PIG : 208- 212: gicig VgGaD avdvm ACON_PIG : 659- 662: girwv ViG-D enyge ACON_YEAST : 204- 208: qlaig VgGaD avdvm ACON_YEAST : 656- 659: gikwv ViG-D enfge ACOX_YEAST : 128- 131: cdhli V-GkD getkd ACOX_YEAST : 205- 209: aiaig VgGaD avdal IREB_HUMAN : 150- 153: ypdsl V-GtD shttm IREB_MOUSE : 202- 205: ypdsl V-GtD shttm IREB_RABIT : 202- 205: ypdsl V-GtD shttm LEU2_ECOLI : 124- 127: pgmti VcG-D shtat LEU2_HAEIN : 124- 127: pgmti VcG-D shtat LEU2_LACLA : 125- 128: pgkti VcG-D shtat LEU2_PHYBL : 119- 122: pgttv VcG-D shtst LEU2_RHIRA : 178- 181: pattv VcG-D shtst LEU2_SALTY : 124- 127: pgmti VcG-D shtat LEU2_YEAST : 138- 141: pgttv VcG-D shtst LEU2_YEAST : 623- 626: aeilv VtG-D nfgcg LEU2_YEAST : 723- 727: rkhcl VnGlD digit S 19: 11.5102 27( 18) V-x(0,1)-G-x(4,5)-K Occurences: 27(18) ACO1_ECOLI : 248- 256: mlipd VvGfkltgK lregi ACO1_ECOLI : 249- 256: lipdv V-GfkltgK lregi ACON_BACSU : 59- 66: svlrq VdGfvik-K ehven ACON_BACSU : 116- 122: kamaa V-Gvdpd-K inpei ACON_BOVIN : 224- 231: dvilk VaGiltv-K ggtga ACON_BOVIN : 337- 343: hpvae V-Gsvae-K egwpl ACON_CAEEL : 237- 245: lkcpk ViGikltgK lngwt ACON_LEGPN : 251- 259: mlipe ViGfklsgK lkegi ACON_LEGPN : 403- 409: nflie V-Gkeke-K ektfa ACON_LEGPN : 601- 608: aevak VsGtmfr-K eyaev ACON_PIG : 251- 258: dvilk VaGiltv-K ggtga ACON_PIG : 364- 370: hpvae V-Gsvae-K egwpl ACON_YEAST : 130- 137: liqaq VgGekdl-K raidl ACON_YEAST : 130- 137: liqaq V-GgekdlK raidl ACOX_YEAST : 128- 135: cdhli V-GkdgetK dlpss IREB_HUMAN : 190- 198: mvlpq ViGyrlmgK phplv IREB_MOUSE : 242- 250: mvlpq ViGyklmgK phplv IREB_RABIT : 242- 250: mvlpq ViGyrlmgK phplv LEU2_ECOLI : 242- 250: ttfny VkGrlhapK gkdfd LEU2_ECOLI : 374- 381: vqalv VpGsgpv-K aqaea LEU2_HAEIN : 376- 383: krilv VpGsglv-K eqaek LEU2_LACLA : 243- 251: ktydy VkGrehapK nfdea LEU2_LACLA : 368- 375: ltgiv VpGsrpv-K eaaea LEU2_PHYBL : 370- 377: vyamv VpGsglv-K rqaer LEU2_RHIRA : 429- 436: vdamv VpGsglv-K rqaer LEU2_SALTY : 242- 250: ttfny VkGrlhapK grdfd LEU2_SALTY : 374- 381: vqalv VpGsgpv-K aqaea LEU2_YEAST : 393- 400: klamv VpGsglv-K kqaea LEU2_YEAST : 393- 401: klamv VpGsglvkK qaeae T 20: 11.5102 47( 18) A-x(1,2)-G-x(3,4)-D Occurences: 47(18) ACO1_ECOLI : 311- 319: speyg AtcGffpiD avtld ACON_BACSU : 114- 121: lrkam AavGvdp-D kinpe ACON_BACSU : 115- 121: rkama Av-Gvdp-D kinpe ACON_BOVIN : 105- 112: dhlie AqlGgek-D lrrak ACON_CAEEL : 140- 147: dhlie AqkGgaq-D larak ACON_CAEEL : 336- 343: kdllt AddGany-D qiiei ACON_CAEEL : 554- 562: edtfq ApsGsgqvD vspss ACON_LEGPN : 314- 322: apeyg AtcGffpvD ketik ACON_LEGPN : 348- 354: eayak Aq-Gmwy-D kdnee ACON_LEGPN : 559- 567: lvvay AlcGttcsD lsrep ACON_PIG : 132- 139: dhlie AqlGgek-D lrrak ACON_YEAST : 128- 135: dhliq AqvGgek-D lkrai ACON_YEAST : 201- 208: glgql Ai-GvggaD avdvm ACON_YEAST : 585- 592: pilik Av-GktttD hisma ACOX_YEAST : 202- 209: glgai Ai-GvggaD avdal IREB_HUMAN : 287- 293: kkylq Av-Gmfr-D fndps IREB_HUMAN : 509- 517: lviay AiaGtiriD fekep IREB_MOUSE : 339- 345: qkylq Av-Gmfr-D fndts IREB_MOUSE : 561- 569: lviay AiaGtvriD fekep IREB_RABIT : 339- 345: rkylq Av-Gmfr-D ysdps IREB_RABIT : 561- 569: lviay AiaGtiriD fekep LEU2_ECOLI : 173- 181: evqgk AapGitakD ivlai LEU2_ECOLI : 174- 181: vqgka Ap-GitakD ivlai LEU2_ECOLI : 227- 235: aiemg AkaGlvapD ettfn LEU2_ECOLI : 248- 255: kgrlh ApkGkdf-D davay LEU2_ECOLI : 248- 256: kgrlh ApkGkdfdD avayw LEU2_ECOLI : 449- 456: spama AvtGhfa-D irnik LEU2_HAEIN : 91- 98: dkntk At-GiklfD ittke LEU2_HAEIN : 174- 181: vrgkv As-GitakD iilai LEU2_HAEIN : 227- 235: aiemg AkaGliapD ettfa LEU2_HAEIN : 248- 256: kdrph ApkGkdweD avayw LEU2_LACLA : 228- 236: siefg AkiGlmnpD ektyd LEU2_LACLA : 401- 408: epgcs AclGmnp-D qipey LEU2_LACLA : 446- 453: maaaa AiaGkfv-D vrmlv LEU2_PHYBL : 222- 230: siegg AraGmiapD eitfe LEU2_PHYBL : 243- 250: rgrpl ApeGaew-D kavqy LEU2_PHYBL : 448- 455: maaaa AirGylt-D vrkfs LEU2_PHYBL : 566- 573: lrydp At-GaekpD fvlnq LEU2_RHIRA : 227- 235: rvqgk AlpGvtskD ivlhi LEU2_RHIRA : 281- 289: sieag AraGmvapD evtfe LEU2_RHIRA : 302- 309: rdkpl ApkGadw-D ravky LEU2_RHIRA : 618- 625: lrfdp At-GaenpD fvlnl LEU2_SALTY : 173- 181: evtgn AapGitakD ivlai LEU2_SALTY : 174- 181: vtgna Ap-GitakD ivlai LEU2_SALTY : 227- 235: aiemg AkaGlvapD ettfn LEU2_SALTY : 248- 255: kgrlh ApkGrdf-D eavey LEU2_SALTY : 452- 459: maaaa AvtGhfa-D irsik LEU2_YEAST : 241- 249: aieag AraGmikpD ettfq Number of patterns evaluated by Pratt:3621 Total running time: 9 seconds