------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 55 sequences from file AAA PATTERN CONSERVATION: CM: min Nr of Seqs to Match 55 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 23 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename AAA.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: A26A_MYCLE 609 AFG2_YEAST 780 BCS1_YEAST 456 CC48_YEAST 835 CDAT_PLAFA 709 CDCH_HALSA 742 FTSH_BACSU 637 FTSH_ECOLI 644 FTSH_HAEIN 381 FTSH_LACLA 695 LET1_SCHPO 403 MEI1_CAEEL 472 MSP1_YEAST 362 NSF_CRIGR 744 NSF_DROME 745 NSF_HUMAN 744 NSF_MOUSE 744 PAS1_PICPA 1157 PAS1_YEAST 1043 PAS5_PICPA 1165 PAS8_YEAST 1030 PAY4_YARLI 1025 PRS4_HUMAN 440 PRS4_ORYSA 448 PRS4_SCHPO 448 PRS4_YEAST 437 PRS6_CAEEL 414 PRS6_DICDI 403 PRS6_HUMAN 418 PRS6_MANSE 415 PRS6_YEAST 428 PRS7_HUMAN 433 PRS7_MOUSE 433 PRS7_XENLA 433 PRS7_YEAST 467 SAV_SULAC 780 SC18_CANAL 794 SC18_YEAST 758 SKD1_MOUSE 444 SKD1_SCHPO 432 SUG1_DICDI 389 SUG1_XENLA 401 SUG1_YEAST 405 TBP1_HUMAN 439 TBP1_ORYSA 429 TBP1_YEAST 434 TBP6_YEAST 446 TBP7_YEAST 1206 TERA_MOUSE 806 TERA_PIG 806 TERA_RAT 806 TERA_XENLA 805 YEN7_YEAST 897 YME1_SCHMA 662 YME1_YEAST 747 Pratt run started at Thu Feb 6 18:26:38 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 15.6802 106( 55) L-x(3,4)-P-G-x(1,2)-G 2: 15.1802 126( 55) P-x(0,1)-G-x-G-x(0,2)-K 3: 15.1802 114( 55) L-x(1,3)-G-x(0,1)-P-G 4: 15.1802 109( 55) L-x(0,2)-G-x(0,1)-P-G 5: 14.6802 71( 55) D-x(0,2)-A-x(2)-R-x(0,2)-R 6: 14.6802 71( 55) D-x(1,3)-A-x(2)-R-x(0,2)-R 7: 12.0102 121( 55) L-x(3,4)-P-G 8: 12.0102 84( 55) D-x-A-x(0,1)-L 9: 12.0102 110( 55) G-x(3)-T-x(4,5)-A 10: 12.0102 81( 55) P-G-x(1,2)-G 11: 12.0102 99( 55) G-x-P-x(2,3)-G 12: 12.0102 77( 55) G-x(0,1)-P-G 13: 12.0102 98( 55) G-x(1,2)-L-x(5)-G 14: 12.0102 82( 55) D-x(0,1)-A-x(2)-R 15: 11.5102 115( 55) G-x(1,2)-G-x(2,3)-L 16: 11.5102 89( 55) A-x(2)-R-x(0,2)-R 17: 11.5102 97( 55) D-x(0,1)-A-x(0,1)-L 18: 11.5102 126( 55) D-x(1,2)-D-x(4,5)-R 19: 11.5102 77( 55) D-x(1,3)-D-x(5)-R 20: 11.5102 79( 55) D-x(0,2)-D-x(5)-R Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 22.2512 120( 55) P-x(0,1)-G-x-G-x(0,2)-K-[DST]-x(2)-[AILV]-x(3)-[AGNS] B 2: 18.2837 105( 55) L-x(3,4)-P-G-x(1,2)-G-x-[DST] C 3: 17.8797 65( 55) D-x(0,1)-A-x(2)-R-x(0,2)-R-[FIL] D 4: 17.3797 65( 55) D-x(1,3)-A-x(2)-R-x(0,2)-R-[FIL] E 5: 16.8276 108( 55) L-x(3,4)-P-G-x-[DGS]-x-[ASTV] F 6: 15.1802 114( 55) L-x(1,3)-G-x(0,1)-P-G G 7: 15.1802 109( 55) L-x(0,2)-G-x(0,1)-P-G H 8: 14.6088 87( 55) G-x(1,2)-L-x(5)-G-x-[GSV] I 9: 14.2280 107( 55) G-x-[DGPS]-x-T-x(4,5)-A J 10: 14.2096 66( 55) A-x(2)-R-x(0,2)-R-[FIL] K 11: 14.1979 72( 55) P-G-x(1,2)-G-x-[DEST] L 12: 13.8927 71( 55) D-x(0,1)-A-x(2)-R-x(4)-[DEQRS] M 13: 13.1290 72( 55) D-x(1,3)-D-[ADGSTV]-x(4)-R N 14: 12.0102 84( 55) D-x-A-x(0,1)-L O 15: 12.0102 99( 55) G-x-P-x(2,3)-G P 16: 12.0102 77( 55) G-x(0,1)-P-G Q 17: 11.5102 115( 55) G-x(1,2)-G-x(2,3)-L R 18: 11.5102 89( 55) A-x(2)-R-x(0,2)-R S 19: 11.5102 97( 55) D-x(0,1)-A-x(0,1)-L T 20: 11.5102 126( 55) D-x(1,2)-D-x(4,5)-R Best patterns with alignements: fitness hits(seqs) Pattern A 1: 22.2512 120( 55) P-x(0,1)-G-x-G-x(0,2)-K-[DST]-x(2)-[AILV]-x(3)-[AGNS] Occurences: 120(55) A26A_MYCLE : 294- 307: vllyg PpGcG--KTliAkavA nslak A26A_MYCLE : 295- 307: llygp P-GcG--KTliAkavA nslak AFG2_YEAST : 287- 300: illhg PpGtG--KTmlLrvvA ntsna AFG2_YEAST : 288- 300: llhgp P-GtG--KTmlLrvvA ntsna BCS1_YEAST : 268- 281: yllys PpGsG--KTsfIqalA geldy BCS1_YEAST : 269- 281: llysp P-GsG--KTsfIqalA geldy CC48_YEAST : 256- 269: vlmyg PpGtG--KTlmAravA netga CC48_YEAST : 257- 269: lmygp P-GtG--KTlmAravA netga CC48_YEAST : 529- 542: vlfyg PpGtG--KTllAkavA tevsa CC48_YEAST : 530- 542: lfygp P-GtG--KTllAkavA tevsa CDAT_PLAFA : 192- 204: lmhgi P-GtG--KTsiAkaiA nesna CDAT_PLAFA : 598- 611: illyg PpGcG--KTllAkaiA necka CDAT_PLAFA : 599- 611: llygp P-GcG--KTllAkaiA necka CDCH_HALSA : 231- 244: vllhg PpGtG--KTllAkavA netsa CDCH_HALSA : 232- 244: llhgp P-GtG--KTllAkavA netsa CDCH_HALSA : 504- 517: vllyg PpGtG--KTlmAkavA netna CDCH_HALSA : 505- 517: llygp P-GtG--KTlmAkavA netna FTSH_BACSU : 202- 215: vllvg PpGtG--KTllAkacA geagv FTSH_BACSU : 203- 215: llvgp P-GtG--KTllAkacA geagv FTSH_ECOLI : 193- 206: vlmvg PpGtG--KTllAkaiA geakv FTSH_ECOLI : 194- 206: lmvgp P-GtG--KTllAkaiA geakv FTSH_HAEIN : 346- 361: epvtp PsGwGepKTqqAayaN sttnd FTSH_LACLA : 234- 247: vlleg PpGtG--KTllAkavA geagv FTSH_LACLA : 235- 247: llegp P-GtG--KTllAkavA geagv LET1_SCHPO : 187- 200: illyg PpGtG--KTllAravA hhtdc LET1_SCHPO : 188- 200: llygp P-GtG--KTllAravA hhtdc MEI1_CAEEL : 234- 247: mvlag PpGtG--KTliAraiA sesss MEI1_CAEEL : 235- 247: vlagp P-GtG--KTliAraiA sesss MSP1_YEAST : 134- 147: vllyg PpGcG--KTmlAkalA kesga MSP1_YEAST : 135- 147: llygp P-GcG--KTmlAkalA kesga NSF_CRIGR : 261- 274: illyg PpGcG--KTllArqiG kmlna NSF_CRIGR : 262- 274: llygp P-GcG--KTllArqiG kmlna NSF_DROME : 261- 274: illyg PpGtG--KTlmArqiG tmlna NSF_DROME : 262- 274: llygp P-GtG--KTlmArqiG tmlna NSF_HUMAN : 261- 274: illyg PpGcG--KTllArqiG kmlna NSF_HUMAN : 262- 274: llygp P-GcG--KTllArqiG kmlna NSF_MOUSE : 261- 274: illyg PpGcG--KTllArqiG kmlna NSF_MOUSE : 262- 274: llygp P-GcG--KTllArqiG kmlna PAS1_PICPA : 842- 854: llygy P-GcG--KTllAsavA aqcgl PAS1_YEAST : 740- 752: llygy P-GcG--KTllAsavA qqcgl PAS5_PICPA : 860- 873: ilfyg PpGtG--KTllAkaiA tnfal PAS5_PICPA : 861- 873: lfygp P-GtG--KTllAkaiA tnfal PAS8_YEAST : 773- 786: ilfyg PpGtG--KTlmAkaiA tnfsl PAS8_YEAST : 774- 786: lfygp P-GtG--KTlmAkaiA tnfsl PAY4_YARLI : 761- 774: ilfyg PpGtG--KTllAkaiA ttfsl PAY4_YARLI : 762- 774: lfygp P-GtG--KTllAkaiA ttfsl PRS4_HUMAN : 227- 240: vilyg PpGtG--KTllAkavA nqtsa PRS4_HUMAN : 228- 240: ilygp P-GtG--KTllAkavA nqtsa PRS4_ORYSA : 236- 248: ilyge P-GtG--KTllAkavA nstsa PRS4_SCHPO : 234- 246: ilyga P-GtG--KTllAkavA nqtsa PRS4_YEAST : 225- 237: ilyga P-GtG--KTllAkavA nqtsa PRS6_CAEEL : 203- 216: vlmyg PpGcG--KTmlAkavA antaa PRS6_CAEEL : 204- 216: lmygp P-GcG--KTmlAkavA antaa PRS6_DICDI : 192- 205: vllyg PpGtG--KTmlAkavA hhtsa PRS6_DICDI : 193- 205: llygp P-GtG--KTmlAkavA hhtsa PRS6_HUMAN : 207- 220: vlmyg PpGcG--KTmlAkavA hhtta PRS6_HUMAN : 208- 220: lmygp P-GcG--KTmlAkavA hhtta PRS6_MANSE : 204- 217: vlmyg PpGcG--KTmlAnavA hhtta PRS6_MANSE : 205- 217: lmygp P-GcG--KTmlAnavA hhtta PRS6_YEAST : 214- 227: vllyg PpGtG--KTmlVkavA nstka PRS6_YEAST : 215- 227: llygp P-GtG--KTmlVkavA nstka PRS7_HUMAN : 217- 230: vllfg PpGtG--KTlcAravA nrtda PRS7_HUMAN : 218- 230: llfgp P-GtG--KTlcAravA nrtda PRS7_MOUSE : 217- 230: vllfg PpGtG--KTlcAravA nrtda PRS7_MOUSE : 218- 230: llfgp P-GtG--KTlcAravA nrtda PRS7_XENLA : 217- 230: vllfg PpGtG--KTlcAravA nrtda PRS7_XENLA : 218- 230: llfgp P-GtG--KTlcAravA nrtda PRS7_YEAST : 251- 264: illyg PpGtG--KTlcAravA nrtda PRS7_YEAST : 252- 264: llygp P-GtG--KTlcAravA nrtda SAV_SULAC : 529- 542: illfg PpGtG--KTmlAkavA tesga SAV_SULAC : 530- 542: llfgp P-GtG--KTmlAkavA tesga SC18_CANAL : 318- 331: lllyg PpGtG--KTliArklS kmlng SC18_CANAL : 319- 331: llygp P-GtG--KTliArklS kmlng SC18_CANAL : 601- 614: illyg PpGvG--KTsiAttlA lnsdf SC18_CANAL : 602- 614: llygp P-GvG--KTsiAttlA lnsdf SC18_YEAST : 282- 295: lllyg PpGtG--KTliArkiG tmlna SC18_YEAST : 283- 295: llygp P-GtG--KTliArkiG tmlna SC18_YEAST : 565- 578: llihg PaGsG--KTalAaeiA lksgf SKD1_MOUSE : 175- 188: illfg PpGtG--KSylAkavA teann SKD1_MOUSE : 176- 188: llfgp P-GtG--KSylAkavA teann SKD1_SCHPO : 170- 183: illyg PpGtG--KSylAkavA teags SKD1_SCHPO : 171- 183: llygp P-GtG--KSylAkavA teags SUG1_DICDI : 173- 186: vllyg PpGtG--KTllAravA hhtdc SUG1_DICDI : 174- 186: llygp P-GtG--KTllAravA hhtdc SUG1_XENLA : 186- 199: vllyg PpGtG--KTllAravA hhtdc SUG1_XENLA : 187- 199: llygp P-GtG--KTllAravA hhtdc SUG1_YEAST : 190- 203: vilyg PpGtG--KTllAravA hhtdc SUG1_YEAST : 191- 203: ilygp P-GtG--KTllAravA hhtdc TBP1_HUMAN : 228- 241: vlmyg PpGtG--KTllAracA aqtka TBP1_HUMAN : 229- 241: lmygp P-GtG--KTllAracA aqtka TBP1_ORYSA : 218- 231: vllyg PpGtG--KTlmAracA aqtna TBP1_ORYSA : 219- 231: llygp P-GtG--KTlmAracA aqtna TBP1_YEAST : 223- 236: almyg PpGtG--KTllAracA aqtna TBP1_YEAST : 224- 236: lmygp P-GtG--KTllAracA aqtna TBP6_YEAST : 216- 229: mllfg PpGtG--KTmiAkavA tesns TBP6_YEAST : 217- 229: llfgp P-GtG--KTmiAkavA tesns TBP7_YEAST : 454- 467: vlfhg PpGtG--KTlmAralA ascss TBP7_YEAST : 455- 467: lfhgp P-GtG--KTlmAralA ascss TERA_MOUSE : 246- 259: illyg PpGtG--KTliAravA netga TERA_MOUSE : 247- 259: llygp P-GtG--KTliAravA netga TERA_MOUSE : 519- 532: vlfyg PpGcG--KTllAkaiA necqa TERA_MOUSE : 520- 532: lfygp P-GcG--KTllAkaiA necqa TERA_PIG : 246- 259: illyg PpGtG--KTliAravA netga TERA_PIG : 247- 259: llygp P-GtG--KTliAravA netga TERA_PIG : 519- 532: vlfyg PpGcG--KTllAkaiA necqa TERA_PIG : 520- 532: lfygp P-GcG--KTllAkaiA necqa TERA_RAT : 246- 259: illyg PpGtG--KTliAravA netga TERA_RAT : 247- 259: llygp P-GtG--KTliAravA netga TERA_RAT : 519- 532: vlfyg PpGcG--KTllAkaiA necqa TERA_RAT : 520- 532: lfygp P-GcG--KTllAkaiA necqa TERA_XENLA : 246- 259: illyg PpGtG--KTliAravA netga TERA_XENLA : 247- 259: llygp P-GtG--KTliAravA netga TERA_XENLA : 519- 532: vlfyg PpGcG--KTllAkaiA necqa TERA_XENLA : 520- 532: lfygp P-GcG--KTllAkaiA necqa YEN7_YEAST : 646- 659: mllfg PpGtG--KTmlAravA teshs YEN7_YEAST : 647- 659: llfgp P-GtG--KTmlAravA teshs YME1_SCHMA : 207- 220: vllvg PpGvG--KTllAkavS geaqv YME1_SCHMA : 208- 220: llvgp P-GvG--KTllAkavS geaqv YME1_YEAST : 322- 335: vlltg PpGtG--KTllAratA geagv YME1_YEAST : 323- 335: lltgp P-GtG--KTllAratA geagv B 2: 18.2837 105( 55) L-x(3,4)-P-G-x(1,2)-G-x-[DST] Occurences: 105(55) A26A_MYCLE : 290- 300: ppkgv LlygpPGc-GkT liaka A26A_MYCLE : 291- 300: pkgvl Lygp-PGc-GkT liaka AFG2_YEAST : 283- 293: pprgi LlhgpPGt-GkT mllrv AFG2_YEAST : 284- 293: prgil Lhgp-PGt-GkT mllrv BCS1_YEAST : 264- 274: yrrgy LlyspPGs-GkT sfiqa BCS1_YEAST : 265- 274: rrgyl Lysp-PGs-GkT sfiqa CC48_YEAST : 252- 262: pprgv LmygpPGt-GkT lmara CC48_YEAST : 525- 535: pskgv LfygpPGt-GkT llaka CDAT_PLAFA : 187- 197: apkgv LmhgiPGt-GkT siaka CDAT_PLAFA : 594- 604: ynkgi LlygpPGc-GkT llaka CDAT_PLAFA : 595- 604: nkgil Lygp-PGc-GkT llaka CDCH_HALSA : 227- 237: ppqgv LlhgpPGt-GkT llaka CDCH_HALSA : 228- 237: pqgvl Lhgp-PGt-GkT llaka CDCH_HALSA : 500- 510: ppagv LlygpPGt-GkT lmaka CDCH_HALSA : 501- 510: pagvl Lygp-PGt-GkT lmaka CDCH_HALSA : 564- 574: iffde LdslaPGr-GqT ggnnv FTSH_BACSU : 198- 208: ipkgv LlvgpPGt-GkT llaka FTSH_BACSU : 199- 208: pkgvl Lvgp-PGt-GkT llaka FTSH_ECOLI : 189- 199: ipkgv LmvgpPGt-GkT llaka FTSH_HAEIN : 94- 105: vdamt LargtPGysGaD lanlv FTSH_LACLA : 230- 240: ipagv LlegpPGt-GkT llaka FTSH_LACLA : 231- 240: pagvl Legp-PGt-GkT llaka LET1_SCHPO : 183- 193: qpkgi LlygpPGt-GkT llara LET1_SCHPO : 184- 193: pkgil Lygp-PGt-GkT llara MEI1_CAEEL : 231- 240: wkamv Lagp-PGt-GkT liara MSP1_YEAST : 130- 140: apsgv LlygpPGc-GkT mlaka MSP1_YEAST : 131- 140: psgvl Lygp-PGc-GkT mlaka NSF_CRIGR : 257- 267: hvkgi LlygpPGc-GkT llarq NSF_CRIGR : 258- 267: vkgil Lygp-PGc-GkT llarq NSF_DROME : 257- 267: hvkgi LlygpPGt-GkT lmarq NSF_DROME : 258- 267: vkgil Lygp-PGt-GkT lmarq NSF_HUMAN : 257- 267: hvkgi LlygpPGc-GkT llarq NSF_HUMAN : 258- 267: vkgil Lygp-PGc-GkT llarq NSF_MOUSE : 257- 267: hvkgi LlygpPGc-GkT llarq NSF_MOUSE : 258- 267: vkgil Lygp-PGc-GkT llarq PAS1_PICPA : 837- 847: lrsgi LlygyPGc-GkT llasa PAS1_PICPA : 838- 847: rsgil Lygy-PGc-GkT llasa PAS1_YEAST : 735- 745: lrsgi LlygyPGc-GkT llasa PAS1_YEAST : 736- 745: rsgil Lygy-PGc-GkT llasa PAS5_PICPA : 856- 866: krsgi LfygpPGt-GkT llaka PAS8_YEAST : 769- 779: krsgi LfygpPGt-GkT lmaka PAY4_YARLI : 757- 767: krsgi LfygpPGt-GkT llaka PRS4_HUMAN : 224- 233: pkgvi Lygp-PGt-GkT llaka PRS4_ORYSA : 232- 241: pkgvi Lyge-PGt-GkT llaka PRS4_SCHPO : 230- 239: pkgvi Lyga-PGt-GkT llaka PRS4_YEAST : 221- 230: pkgvi Lyga-PGt-GkT llaka PRS6_CAEEL : 199- 209: pprgv LmygpPGc-GkT mlaka PRS6_DICDI : 188- 198: pprgv LlygpPGt-GkT mlaka PRS6_DICDI : 189- 198: prgvl Lygp-PGt-GkT mlaka PRS6_HUMAN : 203- 213: pprgv LmygpPGc-GkT mlaka PRS6_MANSE : 200- 210: pprgv LmygpPGc-GkT mlana PRS6_YEAST : 210- 220: pprgv LlygpPGt-GkT mlvka PRS6_YEAST : 211- 220: prgvl Lygp-PGt-GkT mlvka PRS7_HUMAN : 213- 223: ppkgv LlfgpPGt-GkT lcara PRS7_HUMAN : 214- 223: pkgvl Lfgp-PGt-GkT lcara PRS7_MOUSE : 213- 223: ppkgv LlfgpPGt-GkT lcara PRS7_MOUSE : 214- 223: pkgvl Lfgp-PGt-GkT lcara PRS7_XENLA : 213- 223: ppkgv LlfgpPGt-GkT lcara PRS7_XENLA : 214- 223: pkgvl Lfgp-PGt-GkT lcara PRS7_YEAST : 247- 257: ppkgi LlygpPGt-GkT lcara PRS7_YEAST : 248- 257: pkgil Lygp-PGt-GkT lcara SAV_SULAC : 250- 260: ppkgi LlygpPGt-GkT llara SAV_SULAC : 251- 260: pkgil Lygp-PGt-GkT llara SAV_SULAC : 525- 535: ppkgi LlfgpPGt-GkT mlaka SAV_SULAC : 526- 535: pkgil Lfgp-PGt-GkT mlaka SC18_CANAL : 314- 324: hckgl LlygpPGt-GkT liark SC18_CANAL : 315- 324: ckgll Lygp-PGt-GkT liark SC18_CANAL : 597- 607: hlrsi LlygpPGv-GkT siatt SC18_CANAL : 598- 607: lrsil Lygp-PGv-GkT siatt SC18_YEAST : 278- 288: hvkgl LlygpPGt-GkT liark SC18_YEAST : 279- 288: vkgll Lygp-PGt-GkT liark SKD1_MOUSE : 171- 181: pwrgi LlfgpPGt-GkS ylaka SKD1_MOUSE : 172- 181: wrgil Lfgp-PGt-GkS ylaka SKD1_SCHPO : 166- 176: pwsgi LlygpPGt-GkS ylaka SKD1_SCHPO : 167- 176: wsgil Lygp-PGt-GkS ylaka SUG1_DICDI : 169- 179: qpkgv LlygpPGt-GkT llara SUG1_DICDI : 170- 179: pkgvl Lygp-PGt-GkT llara SUG1_XENLA : 182- 192: qpkgv LlygpPGt-GkT llara SUG1_XENLA : 183- 192: pkgvl Lygp-PGt-GkT llara SUG1_YEAST : 187- 196: pkgvi Lygp-PGt-GkT llara TBP1_HUMAN : 224- 234: ppkgv LmygpPGt-GkT llara TBP1_ORYSA : 214- 224: ppkgv LlygpPGt-GkT lmara TBP1_ORYSA : 215- 224: pkgvl Lygp-PGt-GkT lmara TBP1_YEAST : 219- 229: apkga LmygpPGt-GkT llara TBP6_YEAST : 212- 222: pvrgm LlfgpPGt-GkT miaka TBP6_YEAST : 213- 222: vrgml Lfgp-PGt-GkT miaka TBP7_YEAST : 450- 460: tprgv LfhgpPGt-GkT lmara TERA_MOUSE : 242- 252: pprgi LlygpPGt-GkT liara TERA_MOUSE : 243- 252: prgil Lygp-PGt-GkT liara TERA_MOUSE : 515- 525: pskgv LfygpPGc-GkT llaka TERA_PIG : 242- 252: pprgi LlygpPGt-GkT liara TERA_PIG : 243- 252: prgil Lygp-PGt-GkT liara TERA_PIG : 515- 525: pskgv LfygpPGc-GkT llaka TERA_RAT : 242- 252: pprgi LlygpPGt-GkT liara TERA_RAT : 243- 252: prgil Lygp-PGt-GkT liara TERA_RAT : 515- 525: pskgv LfygpPGc-GkT llaka TERA_XENLA : 242- 252: pprgi LlygpPGt-GkT liara TERA_XENLA : 243- 252: prgil Lygp-PGt-GkT liara TERA_XENLA : 515- 525: pskgv LfygpPGc-GkT llaka YEN7_YEAST : 642- 652: pvrgm LlfgpPGt-GkT mlara YEN7_YEAST : 643- 652: vrgml Lfgp-PGt-GkT mlara YME1_SCHMA : 203- 213: lpkgv LlvgpPGv-GkT llaka YME1_SCHMA : 204- 213: pkgvl Lvgp-PGv-GkT llaka YME1_YEAST : 318- 328: lpkgv LltgpPGt-GkT llara YME1_YEAST : 319- 328: pkgvl Ltgp-PGt-GkT llara C 3: 17.8797 65( 55) D-x(0,1)-A-x(2)-R-x(0,2)-R-[FIL] Occurences: 65(55) A26A_MYCLE : 422- 431: redmi DpAilRpgRL dvkik AFG2_YEAST : 396- 405: rpnsv DpAlrRpgRF dqeve AFG2_YEAST : 666- 675: rpdei DaAllRpgRL drhiy BCS1_YEAST : 371- 380: hpekl DaAimRpgRI dykvf CC48_YEAST : 364- 373: rpnsi DpAlrRfgRF drevd CC48_YEAST : 640- 649: rpdqi DpAilRpgRL dqliy CDAT_PLAFA : 299- 308: rpnsi DpAlrRfgRF dreie CDCH_HALSA : 339- 348: rvdav DpAlrRpgRF dreie CDCH_HALSA : 613- 622: rpdii DpAliRsgRF drlvq FTSH_BACSU : 313- 322: radil DpAllRpgRF drqit FTSH_ECOLI : 304- 313: rpdvl DpAllRpgRF drqvv FTSH_HAEIN : 49- 58: rpdvl DpAltRpgRF drqvv FTSH_LACLA : 346- 355: rsdvl DpAllRpgRF drkvl LET1_SCHPO : 299- 308: ridil DpAllRpgRI drkie MEI1_CAEEL : 346- 353: ipwel DeAlrR--RF ekrif MSP1_YEAST : 242- 249: rindi DdAflR--RL pkrfl MSP1_YEAST : 243- 249: indid D-AflR--RL pkrfl NSF_CRIGR : 380- 389: rpdli DeAllRpgRL evkme NSF_DROME : 380- 389: rrdmi DeAllRpgRL evqme NSF_HUMAN : 380- 389: rpdli DeAllRpgRL evkme NSF_MOUSE : 380- 389: rpdli DeAllRpgRL evkme PAS1_PICPA : 949- 958: rpdli DsAllRpgRL dksvi PAS1_YEAST : 847- 856: rpdli DsAllRpgRL dksvi PAS5_PICPA : 973- 982: rpdll DeAllRpgRF dkmly PAS8_YEAST : 884- 893: rpdll DeAllRpgRF dklly PAY4_YARLI : 873- 882: rpdll DeAllRpgRF dkmly PRS4_HUMAN : 338- 347: rietl DpAliRpgRI drkie PRS4_ORYSA : 346- 355: riesl DpAllRpgRI drkie PRS4_SCHPO : 345- 354: risdl DpAliRpgRI drkil PRS4_YEAST : 335- 344: kietl DpAliRpgRI drkil PRS6_CAEEL : 314- 323: rqdtl DpAllRpgRL drkie PRS6_DICDI : 303- 312: rqdtl DpAllRpgRL drkie PRS6_HUMAN : 318- 327: radtl DpAllRpgRL drkie PRS6_MANSE : 315- 324: radtl DpAllRpgRL drkie PRS6_YEAST : 325- 334: radtl DpAllRpgRL drkie PRS7_HUMAN : 328- 337: rpdtl DpAlmRpgRL drkie PRS7_MOUSE : 328- 337: rpdtl DpAlmRpgRL drkie PRS7_XENLA : 328- 337: rpdtl DpAlmRpgRL drkie PRS7_YEAST : 362- 371: rpntl DpAllRpgRI drkve SAV_SULAC : 362- 371: rpdai DpAlrRpgRF dreie SAV_SULAC : 638- 647: rpdil DpAllRpgRF drliy SC18_CANAL : 438- 447: rldli DtAllRpgRF eiqie SC18_YEAST : 401- 410: rkdli DsAllRpgRF evqve SKD1_MOUSE : 285- 292: ipwvl DsAirR--RF ekriy SKD1_SCHPO : 279- 286: ipwtl DsAirR--RF ekriy SUG1_DICDI : 285- 294: ridil DpAllRpgRI drkie SUG1_XENLA : 297- 306: ridil DsAllRpgRI drkie SUG1_YEAST : 301- 310: rldil DpAllRpgRI drkie TBP1_HUMAN : 339- 348: rvdil DpAllRsgRL drkie TBP1_ORYSA : 329- 338: radil DpAlmRsgRL drkie TBP1_YEAST : 334- 343: rvdvl DpAllRsgRL drkie TBP6_YEAST : 336- 343: lpwai DdAarR--RF srkly TBP6_YEAST : 337- 343: pwaid D-AarR--RF srkly TBP7_YEAST : 567- 576: rpdav DpAlrRpgRF drefy TERA_MOUSE : 354- 363: rpnsi DpAlrRfgRF drevd TERA_MOUSE : 630- 639: rpdii DpAilRpgRL dqliy TERA_PIG : 354- 363: rpnsi DpAlrRfgRF drevd TERA_PIG : 630- 639: rpdii DpAilRpgRL dqliy TERA_RAT : 354- 363: rpnsi DpAlrRfgRF drevd TERA_RAT : 630- 639: rpdii DpAilRpgRL dqliy TERA_XENLA : 354- 363: rpnsi DpAlrRfgRF drevd TERA_XENLA : 630- 639: rpdii DpAilRpgRL dqliy YEN7_YEAST : 775- 782: lpwsi DeAarR--RF vrrqy YME1_SCHMA : 316- 325: qaevl DkAllRpgRF dvqih YME1_YEAST : 430- 439: fpeal DkAltRpgRF dkvvn D 4: 17.3797 65( 55) D-x(1,3)-A-x(2)-R-x(0,2)-R-[FIL] Occurences: 65(55) A26A_MYCLE : 422- 431: redmi Dp--AilRpgRL dvkik AFG2_YEAST : 396- 405: rpnsv Dp--AlrRpgRF dqeve AFG2_YEAST : 666- 675: rpdei Da--AllRpgRL drhiy BCS1_YEAST : 371- 380: hpekl Da--AimRpgRI dykvf CC48_YEAST : 364- 373: rpnsi Dp--AlrRfgRF drevd CC48_YEAST : 640- 649: rpdqi Dp--AilRpgRL dqliy CDAT_PLAFA : 299- 308: rpnsi Dp--AlrRfgRF dreie CDCH_HALSA : 339- 348: rvdav Dp--AlrRpgRF dreie CDCH_HALSA : 613- 622: rpdii Dp--AliRsgRF drlvq FTSH_BACSU : 313- 322: radil Dp--AllRpgRF drqit FTSH_ECOLI : 304- 313: rpdvl Dp--AllRpgRF drqvv FTSH_HAEIN : 49- 58: rpdvl Dp--AltRpgRF drqvv FTSH_LACLA : 346- 355: rsdvl Dp--AllRpgRF drkvl LET1_SCHPO : 299- 308: ridil Dp--AllRpgRI drkie MEI1_CAEEL : 346- 353: ipwel De--AlrR--RF ekrif MSP1_YEAST : 240- 249: tnrin DiddAflR--RL pkrfl MSP1_YEAST : 242- 249: rindi Dd--AflR--RL pkrfl NSF_CRIGR : 380- 389: rpdli De--AllRpgRL evkme NSF_DROME : 380- 389: rrdmi De--AllRpgRL evqme NSF_HUMAN : 380- 389: rpdli De--AllRpgRL evkme NSF_MOUSE : 380- 389: rpdli De--AllRpgRL evkme PAS1_PICPA : 949- 958: rpdli Ds--AllRpgRL dksvi PAS1_YEAST : 847- 856: rpdli Ds--AllRpgRL dksvi PAS5_PICPA : 973- 982: rpdll De--AllRpgRF dkmly PAS8_YEAST : 884- 893: rpdll De--AllRpgRF dklly PAY4_YARLI : 873- 882: rpdll De--AllRpgRF dkmly PRS4_HUMAN : 338- 347: rietl Dp--AliRpgRI drkie PRS4_ORYSA : 346- 355: riesl Dp--AllRpgRI drkie PRS4_SCHPO : 343- 354: tnris DldpAliRpgRI drkil PRS4_SCHPO : 345- 354: risdl Dp--AliRpgRI drkil PRS4_YEAST : 335- 344: kietl Dp--AliRpgRI drkil PRS6_CAEEL : 314- 323: rqdtl Dp--AllRpgRL drkie PRS6_DICDI : 303- 312: rqdtl Dp--AllRpgRL drkie PRS6_HUMAN : 318- 327: radtl Dp--AllRpgRL drkie PRS6_MANSE : 315- 324: radtl Dp--AllRpgRL drkie PRS6_YEAST : 325- 334: radtl Dp--AllRpgRL drkie PRS7_HUMAN : 328- 337: rpdtl Dp--AlmRpgRL drkie PRS7_MOUSE : 328- 337: rpdtl Dp--AlmRpgRL drkie PRS7_XENLA : 328- 337: rpdtl Dp--AlmRpgRL drkie PRS7_YEAST : 362- 371: rpntl Dp--AllRpgRI drkve SAV_SULAC : 362- 371: rpdai Dp--AlrRpgRF dreie SAV_SULAC : 638- 647: rpdil Dp--AllRpgRF drliy SC18_CANAL : 438- 447: rldli Dt--AllRpgRF eiqie SC18_YEAST : 401- 410: rkdli Ds--AllRpgRF evqve SKD1_MOUSE : 285- 292: ipwvl Ds--AirR--RF ekriy SKD1_SCHPO : 279- 286: ipwtl Ds--AirR--RF ekriy SUG1_DICDI : 285- 294: ridil Dp--AllRpgRI drkie SUG1_XENLA : 297- 306: ridil Ds--AllRpgRI drkie SUG1_YEAST : 301- 310: rldil Dp--AllRpgRI drkie TBP1_HUMAN : 339- 348: rvdil Dp--AllRsgRL drkie TBP1_ORYSA : 329- 338: radil Dp--AlmRsgRL drkie TBP1_YEAST : 334- 343: rvdvl Dp--AllRsgRL drkie TBP6_YEAST : 336- 343: lpwai Dd--AarR--RF srkly TBP7_YEAST : 567- 576: rpdav Dp--AlrRpgRF drefy TERA_MOUSE : 354- 363: rpnsi Dp--AlrRfgRF drevd TERA_MOUSE : 630- 639: rpdii Dp--AilRpgRL dqliy TERA_PIG : 354- 363: rpnsi Dp--AlrRfgRF drevd TERA_PIG : 630- 639: rpdii Dp--AilRpgRL dqliy TERA_RAT : 354- 363: rpnsi Dp--AlrRfgRF drevd TERA_RAT : 630- 639: rpdii Dp--AilRpgRL dqliy TERA_XENLA : 354- 363: rpnsi Dp--AlrRfgRF drevd TERA_XENLA : 630- 639: rpdii Dp--AilRpgRL dqliy YEN7_YEAST : 775- 782: lpwsi De--AarR--RF vrrqy YME1_SCHMA : 316- 325: qaevl Dk--AllRpgRF dvqih YME1_YEAST : 430- 439: fpeal Dk--AltRpgRF dkvvn E 5: 16.8276 108( 55) L-x(3,4)-P-G-x-[DGS]-x-[ASTV] Occurences: 108(55) A26A_MYCLE : 290- 300: ppkgv LlygpPGcGkT liaka A26A_MYCLE : 291- 300: pkgvl Lygp-PGcGkT liaka AFG2_YEAST : 283- 293: pprgi LlhgpPGtGkT mllrv AFG2_YEAST : 284- 293: prgil Lhgp-PGtGkT mllrv AFG2_YEAST : 554- 564: apkgv LlygpPGcSkT ltaka AFG2_YEAST : 555- 564: pkgvl Lygp-PGcSkT ltaka BCS1_YEAST : 264- 274: yrrgy LlyspPGsGkT sfiqa BCS1_YEAST : 265- 274: rrgyl Lysp-PGsGkT sfiqa CC48_YEAST : 252- 262: pprgv LmygpPGtGkT lmara CC48_YEAST : 525- 535: pskgv LfygpPGtGkT llaka CDAT_PLAFA : 187- 197: apkgv LmhgiPGtGkT siaka CDAT_PLAFA : 594- 604: ynkgi LlygpPGcGkT llaka CDAT_PLAFA : 595- 604: nkgil Lygp-PGcGkT llaka CDCH_HALSA : 227- 237: ppqgv LlhgpPGtGkT llaka CDCH_HALSA : 228- 237: pqgvl Lhgp-PGtGkT llaka CDCH_HALSA : 500- 510: ppagv LlygpPGtGkT lmaka CDCH_HALSA : 501- 510: pagvl Lygp-PGtGkT lmaka CDCH_HALSA : 564- 574: iffde LdslaPGrGqT ggnnv FTSH_BACSU : 198- 208: ipkgv LlvgpPGtGkT llaka FTSH_BACSU : 199- 208: pkgvl Lvgp-PGtGkT llaka FTSH_ECOLI : 189- 199: ipkgv LmvgpPGtGkT llaka FTSH_HAEIN : 94- 104: vdamt LargtPGySgA dlanl FTSH_LACLA : 230- 240: ipagv LlegpPGtGkT llaka FTSH_LACLA : 231- 240: pagvl Legp-PGtGkT llaka LET1_SCHPO : 183- 193: qpkgi LlygpPGtGkT llara LET1_SCHPO : 184- 193: pkgil Lygp-PGtGkT llara MEI1_CAEEL : 231- 240: wkamv Lagp-PGtGkT liara MSP1_YEAST : 130- 140: apsgv LlygpPGcGkT mlaka MSP1_YEAST : 131- 140: psgvl Lygp-PGcGkT mlaka NSF_CRIGR : 257- 267: hvkgi LlygpPGcGkT llarq NSF_CRIGR : 258- 267: vkgil Lygp-PGcGkT llarq NSF_DROME : 257- 267: hvkgi LlygpPGtGkT lmarq NSF_DROME : 258- 267: vkgil Lygp-PGtGkT lmarq NSF_HUMAN : 257- 267: hvkgi LlygpPGcGkT llarq NSF_HUMAN : 258- 267: vkgil Lygp-PGcGkT llarq NSF_MOUSE : 257- 267: hvkgi LlygpPGcGkT llarq NSF_MOUSE : 258- 267: vkgil Lygp-PGcGkT llarq PAS1_PICPA : 837- 847: lrsgi LlygyPGcGkT llasa PAS1_PICPA : 838- 847: rsgil Lygy-PGcGkT llasa PAS1_YEAST : 735- 745: lrsgi LlygyPGcGkT llasa PAS1_YEAST : 736- 745: rsgil Lygy-PGcGkT llasa PAS5_PICPA : 856- 866: krsgi LfygpPGtGkT llaka PAS8_YEAST : 769- 779: krsgi LfygpPGtGkT lmaka PAY4_YARLI : 757- 767: krsgi LfygpPGtGkT llaka PRS4_HUMAN : 224- 233: pkgvi Lygp-PGtGkT llaka PRS4_ORYSA : 232- 241: pkgvi Lyge-PGtGkT llaka PRS4_SCHPO : 230- 239: pkgvi Lyga-PGtGkT llaka PRS4_YEAST : 221- 230: pkgvi Lyga-PGtGkT llaka PRS6_CAEEL : 199- 209: pprgv LmygpPGcGkT mlaka PRS6_DICDI : 188- 198: pprgv LlygpPGtGkT mlaka PRS6_DICDI : 189- 198: prgvl Lygp-PGtGkT mlaka PRS6_HUMAN : 203- 213: pprgv LmygpPGcGkT mlaka PRS6_MANSE : 200- 210: pprgv LmygpPGcGkT mlana PRS6_YEAST : 210- 220: pprgv LlygpPGtGkT mlvka PRS6_YEAST : 211- 220: prgvl Lygp-PGtGkT mlvka PRS7_HUMAN : 213- 223: ppkgv LlfgpPGtGkT lcara PRS7_HUMAN : 214- 223: pkgvl Lfgp-PGtGkT lcara PRS7_MOUSE : 213- 223: ppkgv LlfgpPGtGkT lcara PRS7_MOUSE : 214- 223: pkgvl Lfgp-PGtGkT lcara PRS7_XENLA : 213- 223: ppkgv LlfgpPGtGkT lcara PRS7_XENLA : 214- 223: pkgvl Lfgp-PGtGkT lcara PRS7_YEAST : 247- 257: ppkgi LlygpPGtGkT lcara PRS7_YEAST : 248- 257: pkgil Lygp-PGtGkT lcara SAV_SULAC : 250- 260: ppkgi LlygpPGtGkT llara SAV_SULAC : 251- 260: pkgil Lygp-PGtGkT llara SAV_SULAC : 525- 535: ppkgi LlfgpPGtGkT mlaka SAV_SULAC : 526- 535: pkgil Lfgp-PGtGkT mlaka SC18_CANAL : 49- 59: lkkql LvdnsPGnDvV iancv SC18_CANAL : 314- 324: hckgl LlygpPGtGkT liark SC18_CANAL : 315- 324: ckgll Lygp-PGtGkT liark SC18_CANAL : 597- 607: hlrsi LlygpPGvGkT siatt SC18_CANAL : 598- 607: lrsil Lygp-PGvGkT siatt SC18_YEAST : 278- 288: hvkgl LlygpPGtGkT liark SC18_YEAST : 279- 288: vkgll Lygp-PGtGkT liark SKD1_MOUSE : 171- 181: pwrgi LlfgpPGtGkS ylaka SKD1_MOUSE : 172- 181: wrgil Lfgp-PGtGkS ylaka SKD1_SCHPO : 166- 176: pwsgi LlygpPGtGkS ylaka SKD1_SCHPO : 167- 176: wsgil Lygp-PGtGkS ylaka SUG1_DICDI : 169- 179: qpkgv LlygpPGtGkT llara SUG1_DICDI : 170- 179: pkgvl Lygp-PGtGkT llara SUG1_XENLA : 182- 192: qpkgv LlygpPGtGkT llara SUG1_XENLA : 183- 192: pkgvl Lygp-PGtGkT llara SUG1_YEAST : 187- 196: pkgvi Lygp-PGtGkT llara TBP1_HUMAN : 224- 234: ppkgv LmygpPGtGkT llara TBP1_ORYSA : 214- 224: ppkgv LlygpPGtGkT lmara TBP1_ORYSA : 215- 224: pkgvl Lygp-PGtGkT lmara TBP1_YEAST : 219- 229: apkga LmygpPGtGkT llara TBP6_YEAST : 212- 222: pvrgm LlfgpPGtGkT miaka TBP6_YEAST : 213- 222: vrgml Lfgp-PGtGkT miaka TBP7_YEAST : 450- 460: tprgv LfhgpPGtGkT lmara TERA_MOUSE : 242- 252: pprgi LlygpPGtGkT liara TERA_MOUSE : 243- 252: prgil Lygp-PGtGkT liara TERA_MOUSE : 515- 525: pskgv LfygpPGcGkT llaka TERA_PIG : 242- 252: pprgi LlygpPGtGkT liara TERA_PIG : 243- 252: prgil Lygp-PGtGkT liara TERA_PIG : 515- 525: pskgv LfygpPGcGkT llaka TERA_RAT : 242- 252: pprgi LlygpPGtGkT liara TERA_RAT : 243- 252: prgil Lygp-PGtGkT liara TERA_RAT : 515- 525: pskgv LfygpPGcGkT llaka TERA_XENLA : 242- 252: pprgi LlygpPGtGkT liara TERA_XENLA : 243- 252: prgil Lygp-PGtGkT liara TERA_XENLA : 515- 525: pskgv LfygpPGcGkT llaka YEN7_YEAST : 642- 652: pvrgm LlfgpPGtGkT mlara YEN7_YEAST : 643- 652: vrgml Lfgp-PGtGkT mlara YME1_SCHMA : 203- 213: lpkgv LlvgpPGvGkT llaka YME1_SCHMA : 204- 213: pkgvl Lvgp-PGvGkT llaka YME1_YEAST : 318- 328: lpkgv LltgpPGtGkT llara YME1_YEAST : 319- 328: pkgvl Ltgp-PGtGkT llara F 6: 15.1802 114( 55) L-x(1,3)-G-x(0,1)-P-G Occurences: 114(55) A26A_MYCLE : 197- 203: lvaen Lld-GvPG alndd A26A_MYCLE : 198- 203: vaenl Ld--GvPG alndd A26A_MYCLE : 290- 296: ppkgv Lly-GpPG cgktl A26A_MYCLE : 291- 296: pkgvl Ly--GpPG cgktl A26A_MYCLE : 535- 541: aiksv Let-GqPG lriqh AFG2_YEAST : 283- 289: pprgi Llh-GpPG tgktm AFG2_YEAST : 284- 289: prgil Lh--GpPG tgktm AFG2_YEAST : 554- 560: apkgv Lly-GpPG csktl AFG2_YEAST : 555- 560: pkgvl Ly--GpPG csktl BCS1_YEAST : 134- 139: stkfs Lvp-G-PG nhwir CC48_YEAST : 252- 258: pprgv Lmy-GpPG tgktl CC48_YEAST : 525- 531: pskgv Lfy-GpPG tgktl CDAT_PLAFA : 187- 193: apkgv Lmh-GiPG tgkts CDAT_PLAFA : 594- 600: ynkgi Lly-GpPG cgktl CDAT_PLAFA : 595- 600: nkgil Ly--GpPG cgktl CDCH_HALSA : 227- 233: ppqgv Llh-GpPG tgktl CDCH_HALSA : 228- 233: pqgvl Lh--GpPG tgktl CDCH_HALSA : 500- 506: ppagv Lly-GpPG tgktl CDCH_HALSA : 501- 506: pagvl Ly--GpPG tgktl CDCH_HALSA : 625- 632: grfdr LvqvGqPG iegre FTSH_BACSU : 198- 204: ipkgv Llv-GpPG tgktl FTSH_BACSU : 199- 204: pkgvl Lv--GpPG tgktl FTSH_ECOLI : 189- 195: ipkgv Lmv-GpPG tgktl FTSH_HAEIN : 94- 100: vdamt Lar-GtPG ysgad FTSH_LACLA : 230- 236: ipagv Lle-GpPG tgktl FTSH_LACLA : 231- 236: pagvl Le--GpPG tgktl LET1_SCHPO : 183- 189: qpkgi Lly-GpPG tgktl LET1_SCHPO : 184- 189: pkgil Ly--GpPG tgktl MEI1_CAEEL : 231- 236: wkamv La--GpPG tgktl MSP1_YEAST : 130- 136: apsgv Lly-GpPG cgktm MSP1_YEAST : 131- 136: psgvl Ly--GpPG cgktm NSF_CRIGR : 257- 263: hvkgi Lly-GpPG cgktl NSF_CRIGR : 258- 263: vkgil Ly--GpPG cgktl NSF_DROME : 257- 263: hvkgi Lly-GpPG tgktl NSF_DROME : 258- 263: vkgil Ly--GpPG tgktl NSF_HUMAN : 257- 263: hvkgi Lly-GpPG cgktl NSF_HUMAN : 258- 263: vkgil Ly--GpPG cgktl NSF_MOUSE : 257- 263: hvkgi Lly-GpPG cgktl NSF_MOUSE : 258- 263: vkgil Ly--GpPG cgktl PAS1_PICPA : 273- 277: vsvsv Lv--G-PG tpdrt PAS1_PICPA : 837- 843: lrsgi Lly-GyPG cgktl PAS1_PICPA : 838- 843: rsgil Ly--GyPG cgktl PAS1_YEAST : 735- 741: lrsgi Lly-GyPG cgktl PAS1_YEAST : 736- 741: rsgil Ly--GyPG cgktl PAS5_PICPA : 856- 862: krsgi Lfy-GpPG tgktl PAS8_YEAST : 40- 46: ygtir LpqyG-PG ctpgk PAS8_YEAST : 769- 775: krsgi Lfy-GpPG tgktl PAY4_YARLI : 611- 617: qifsh LtksG-PG gdsir PAY4_YARLI : 757- 763: krsgi Lfy-GpPG tgktl PRS4_HUMAN : 224- 229: pkgvi Ly--GpPG tgktl PRS4_ORYSA : 232- 237: pkgvi Ly--GePG tgktl PRS4_SCHPO : 230- 235: pkgvi Ly--GaPG tgktl PRS4_YEAST : 221- 226: pkgvi Ly--GaPG tgktl PRS6_CAEEL : 199- 205: pprgv Lmy-GpPG cgktm PRS6_DICDI : 188- 194: pprgv Lly-GpPG tgktm PRS6_DICDI : 189- 194: prgvl Ly--GpPG tgktm PRS6_HUMAN : 203- 209: pprgv Lmy-GpPG cgktm PRS6_MANSE : 200- 206: pprgv Lmy-GpPG cgktm PRS6_YEAST : 210- 216: pprgv Lly-GpPG tgktm PRS6_YEAST : 211- 216: prgvl Ly--GpPG tgktm PRS7_HUMAN : 213- 219: ppkgv Llf-GpPG tgktl PRS7_HUMAN : 214- 219: pkgvl Lf--GpPG tgktl PRS7_MOUSE : 213- 219: ppkgv Llf-GpPG tgktl PRS7_MOUSE : 214- 219: pkgvl Lf--GpPG tgktl PRS7_XENLA : 213- 219: ppkgv Llf-GpPG tgktl PRS7_XENLA : 214- 219: pkgvl Lf--GpPG tgktl PRS7_YEAST : 247- 253: ppkgi Lly-GpPG tgktl PRS7_YEAST : 248- 253: pkgil Ly--GpPG tgktl SAV_SULAC : 250- 256: ppkgi Lly-GpPG tgktl SAV_SULAC : 251- 256: pkgil Ly--GpPG tgktl SAV_SULAC : 525- 531: ppkgi Llf-GpPG tgktm SAV_SULAC : 526- 531: pkgil Lf--GpPG tgktm SC18_CANAL : 313- 320: khckg LllyGpPG tgktl SC18_CANAL : 314- 320: hckgl Lly-GpPG tgktl SC18_CANAL : 315- 320: ckgll Ly--GpPG tgktl SC18_CANAL : 597- 603: hlrsi Lly-GpPG vgkts SC18_CANAL : 598- 603: lrsil Ly--GpPG vgkts SC18_YEAST : 277- 284: shvkg LllyGpPG tgktl SC18_YEAST : 278- 284: hvkgl Lly-GpPG tgktl SC18_YEAST : 279- 284: vkgll Ly--GpPG tgktl SKD1_MOUSE : 171- 177: pwrgi Llf-GpPG tgksy SKD1_MOUSE : 172- 177: wrgil Lf--GpPG tgksy SKD1_SCHPO : 166- 172: pwsgi Lly-GpPG tgksy SKD1_SCHPO : 167- 172: wsgil Ly--GpPG tgksy SUG1_DICDI : 169- 175: qpkgv Lly-GpPG tgktl SUG1_DICDI : 170- 175: pkgvl Ly--GpPG tgktl SUG1_XENLA : 182- 188: qpkgv Lly-GpPG tgktl SUG1_XENLA : 183- 188: pkgvl Ly--GpPG tgktl SUG1_YEAST : 187- 192: pkgvi Ly--GpPG tgktl TBP1_HUMAN : 224- 230: ppkgv Lmy-GpPG tgktl TBP1_ORYSA : 214- 220: ppkgv Lly-GpPG tgktl TBP1_ORYSA : 215- 220: pkgvl Ly--GpPG tgktl TBP1_YEAST : 219- 225: apkga Lmy-GpPG tgktl TBP6_YEAST : 212- 218: pvrgm Llf-GpPG tgktm TBP6_YEAST : 213- 218: vrgml Lf--GpPG tgktm TBP7_YEAST : 450- 456: tprgv Lfh-GpPG tgktl TERA_MOUSE : 242- 248: pprgi Lly-GpPG tgktl TERA_MOUSE : 243- 248: prgil Ly--GpPG tgktl TERA_MOUSE : 515- 521: pskgv Lfy-GpPG cgktl TERA_PIG : 242- 248: pprgi Lly-GpPG tgktl TERA_PIG : 243- 248: prgil Ly--GpPG tgktl TERA_PIG : 515- 521: pskgv Lfy-GpPG cgktl TERA_RAT : 242- 248: pprgi Lly-GpPG tgktl TERA_RAT : 243- 248: prgil Ly--GpPG tgktl TERA_RAT : 515- 521: pskgv Lfy-GpPG cgktl TERA_XENLA : 242- 248: pprgi Lly-GpPG tgktl TERA_XENLA : 243- 248: prgil Ly--GpPG tgktl TERA_XENLA : 515- 521: pskgv Lfy-GpPG cgktl YEN7_YEAST : 642- 648: pvrgm Llf-GpPG tgktm YEN7_YEAST : 643- 648: vrgml Lf--GpPG tgktm YME1_SCHMA : 203- 209: lpkgv Llv-GpPG vgktl YME1_SCHMA : 204- 209: pkgvl Lv--GpPG vgktl YME1_YEAST : 318- 324: lpkgv Llt-GpPG tgktl YME1_YEAST : 319- 324: pkgvl Lt--GpPG tgktl G 7: 15.1802 109( 55) L-x(0,2)-G-x(0,1)-P-G Occurences: 109(55) A26A_MYCLE : 197- 203: lvaen LldGvPG alndd A26A_MYCLE : 198- 203: vaenl Ld-GvPG alndd A26A_MYCLE : 290- 296: ppkgv LlyGpPG cgktl A26A_MYCLE : 291- 296: pkgvl Ly-GpPG cgktl A26A_MYCLE : 535- 541: aiksv LetGqPG lriqh AFG2_YEAST : 283- 289: pprgi LlhGpPG tgktm AFG2_YEAST : 284- 289: prgil Lh-GpPG tgktm AFG2_YEAST : 554- 560: apkgv LlyGpPG csktl AFG2_YEAST : 555- 560: pkgvl Ly-GpPG csktl BCS1_YEAST : 134- 139: stkfs LvpG-PG nhwir CC48_YEAST : 252- 258: pprgv LmyGpPG tgktl CC48_YEAST : 525- 531: pskgv LfyGpPG tgktl CDAT_PLAFA : 187- 193: apkgv LmhGiPG tgkts CDAT_PLAFA : 594- 600: ynkgi LlyGpPG cgktl CDAT_PLAFA : 595- 600: nkgil Ly-GpPG cgktl CDCH_HALSA : 227- 233: ppqgv LlhGpPG tgktl CDCH_HALSA : 228- 233: pqgvl Lh-GpPG tgktl CDCH_HALSA : 500- 506: ppagv LlyGpPG tgktl CDCH_HALSA : 501- 506: pagvl Ly-GpPG tgktl FTSH_BACSU : 198- 204: ipkgv LlvGpPG tgktl FTSH_BACSU : 199- 204: pkgvl Lv-GpPG tgktl FTSH_ECOLI : 189- 195: ipkgv LmvGpPG tgktl FTSH_HAEIN : 94- 100: vdamt LarGtPG ysgad FTSH_LACLA : 230- 236: ipagv LleGpPG tgktl FTSH_LACLA : 231- 236: pagvl Le-GpPG tgktl LET1_SCHPO : 183- 189: qpkgi LlyGpPG tgktl LET1_SCHPO : 184- 189: pkgil Ly-GpPG tgktl MEI1_CAEEL : 231- 236: wkamv La-GpPG tgktl MSP1_YEAST : 130- 136: apsgv LlyGpPG cgktm MSP1_YEAST : 131- 136: psgvl Ly-GpPG cgktm NSF_CRIGR : 257- 263: hvkgi LlyGpPG cgktl NSF_CRIGR : 258- 263: vkgil Ly-GpPG cgktl NSF_DROME : 257- 263: hvkgi LlyGpPG tgktl NSF_DROME : 258- 263: vkgil Ly-GpPG tgktl NSF_HUMAN : 257- 263: hvkgi LlyGpPG cgktl NSF_HUMAN : 258- 263: vkgil Ly-GpPG cgktl NSF_MOUSE : 257- 263: hvkgi LlyGpPG cgktl NSF_MOUSE : 258- 263: vkgil Ly-GpPG cgktl PAS1_PICPA : 273- 277: vsvsv Lv-G-PG tpdrt PAS1_PICPA : 837- 843: lrsgi LlyGyPG cgktl PAS1_PICPA : 838- 843: rsgil Ly-GyPG cgktl PAS1_YEAST : 735- 741: lrsgi LlyGyPG cgktl PAS1_YEAST : 736- 741: rsgil Ly-GyPG cgktl PAS5_PICPA : 856- 862: krsgi LfyGpPG tgktl PAS8_YEAST : 769- 775: krsgi LfyGpPG tgktl PAY4_YARLI : 757- 763: krsgi LfyGpPG tgktl PRS4_HUMAN : 224- 229: pkgvi Ly-GpPG tgktl PRS4_ORYSA : 232- 237: pkgvi Ly-GePG tgktl PRS4_SCHPO : 230- 235: pkgvi Ly-GaPG tgktl PRS4_YEAST : 221- 226: pkgvi Ly-GaPG tgktl PRS6_CAEEL : 199- 205: pprgv LmyGpPG cgktm PRS6_DICDI : 188- 194: pprgv LlyGpPG tgktm PRS6_DICDI : 189- 194: prgvl Ly-GpPG tgktm PRS6_HUMAN : 203- 209: pprgv LmyGpPG cgktm PRS6_MANSE : 200- 206: pprgv LmyGpPG cgktm PRS6_YEAST : 210- 216: pprgv LlyGpPG tgktm PRS6_YEAST : 211- 216: prgvl Ly-GpPG tgktm PRS7_HUMAN : 213- 219: ppkgv LlfGpPG tgktl PRS7_HUMAN : 214- 219: pkgvl Lf-GpPG tgktl PRS7_MOUSE : 213- 219: ppkgv LlfGpPG tgktl PRS7_MOUSE : 214- 219: pkgvl Lf-GpPG tgktl PRS7_XENLA : 213- 219: ppkgv LlfGpPG tgktl PRS7_XENLA : 214- 219: pkgvl Lf-GpPG tgktl PRS7_YEAST : 247- 253: ppkgi LlyGpPG tgktl PRS7_YEAST : 248- 253: pkgil Ly-GpPG tgktl SAV_SULAC : 250- 256: ppkgi LlyGpPG tgktl SAV_SULAC : 251- 256: pkgil Ly-GpPG tgktl SAV_SULAC : 525- 531: ppkgi LlfGpPG tgktm SAV_SULAC : 526- 531: pkgil Lf-GpPG tgktm SC18_CANAL : 314- 320: hckgl LlyGpPG tgktl SC18_CANAL : 315- 320: ckgll Ly-GpPG tgktl SC18_CANAL : 597- 603: hlrsi LlyGpPG vgkts SC18_CANAL : 598- 603: lrsil Ly-GpPG vgkts SC18_YEAST : 278- 284: hvkgl LlyGpPG tgktl SC18_YEAST : 279- 284: vkgll Ly-GpPG tgktl SKD1_MOUSE : 171- 177: pwrgi LlfGpPG tgksy SKD1_MOUSE : 172- 177: wrgil Lf-GpPG tgksy SKD1_SCHPO : 166- 172: pwsgi LlyGpPG tgksy SKD1_SCHPO : 167- 172: wsgil Ly-GpPG tgksy SUG1_DICDI : 169- 175: qpkgv LlyGpPG tgktl SUG1_DICDI : 170- 175: pkgvl Ly-GpPG tgktl SUG1_XENLA : 182- 188: qpkgv LlyGpPG tgktl SUG1_XENLA : 183- 188: pkgvl Ly-GpPG tgktl SUG1_YEAST : 187- 192: pkgvi Ly-GpPG tgktl TBP1_HUMAN : 224- 230: ppkgv LmyGpPG tgktl TBP1_ORYSA : 214- 220: ppkgv LlyGpPG tgktl TBP1_ORYSA : 215- 220: pkgvl Ly-GpPG tgktl TBP1_YEAST : 219- 225: apkga LmyGpPG tgktl TBP6_YEAST : 212- 218: pvrgm LlfGpPG tgktm TBP6_YEAST : 213- 218: vrgml Lf-GpPG tgktm TBP7_YEAST : 450- 456: tprgv LfhGpPG tgktl TERA_MOUSE : 242- 248: pprgi LlyGpPG tgktl TERA_MOUSE : 243- 248: prgil Ly-GpPG tgktl TERA_MOUSE : 515- 521: pskgv LfyGpPG cgktl TERA_PIG : 242- 248: pprgi LlyGpPG tgktl TERA_PIG : 243- 248: prgil Ly-GpPG tgktl TERA_PIG : 515- 521: pskgv LfyGpPG cgktl TERA_RAT : 242- 248: pprgi LlyGpPG tgktl TERA_RAT : 243- 248: prgil Ly-GpPG tgktl TERA_RAT : 515- 521: pskgv LfyGpPG cgktl TERA_XENLA : 242- 248: pprgi LlyGpPG tgktl TERA_XENLA : 243- 248: prgil Ly-GpPG tgktl TERA_XENLA : 515- 521: pskgv LfyGpPG cgktl YEN7_YEAST : 642- 648: pvrgm LlfGpPG tgktm YEN7_YEAST : 643- 648: vrgml Lf-GpPG tgktm YME1_SCHMA : 203- 209: lpkgv LlvGpPG vgktl YME1_SCHMA : 204- 209: pkgvl Lv-GpPG vgktl YME1_YEAST : 318- 324: lpkgv LltGpPG tgktl YME1_YEAST : 319- 324: pkgvl Lt-GpPG tgktl H 8: 14.6088 87( 55) G-x(1,2)-L-x(5)-G-x-[GSV] Occurences: 87(55) A26A_MYCLE : 288- 298: lrppk Gv-LlygppGcG ktlia AFG2_YEAST : 281- 291: vsppr Gi-LlhgppGtG ktmll AFG2_YEAST : 552- 562: isapk Gv-LlygppGcS ktlta BCS1_YEAST : 262- 272: ipyrr Gy-LlysppGsG ktsfi CC48_YEAST : 250- 260: ikppr Gv-LmygppGtG ktlma CC48_YEAST : 523- 533: lspsk Gv-LfygppGtG ktlla CC48_YEAST : 554- 565: fisvk GpeLlsmwyGeS esnir CDAT_PLAFA : 185- 195: isapk Gv-LmhgipGtG ktsia CDAT_PLAFA : 592- 602: snynk Gi-LlygppGcG ktlla CDAT_PLAFA : 623- 634: fisvk GpeLltmwfGeS eanvr CDCH_HALSA : 225- 235: ieppq Gv-LlhgppGtG ktlla CDCH_HALSA : 498- 508: veppa Gv-LlygppGtG ktlma CDCH_HALSA : 529- 540: fisvr GpqLlskwvGeS ekair FTSH_BACSU : 196- 206: aripk Gv-LlvgppGtG ktlla FTSH_ECOLI : 187- 197: gkipk Gv-LmvgppGtG ktlla FTSH_ECOLI : 514- 525: fsekl GplLyaeeeGeV flgrs FTSH_HAEIN : 259- 270: fsekl GpiLytedeGeV flgrs FTSH_LACLA : 228- 238: aripa Gv-LlegppGtG ktlla LET1_SCHPO : 181- 191: ipqpk Gi-LlygppGtG ktlla LET1_SCHPO : 212- 223: firvs GseLvqkyiGeG srmvr MEI1_CAEEL : 154- 164: anptq Gi-LpqnsaGdS fdasa MSP1_YEAST : 128- 138: lqaps Gv-LlygppGcG ktmla NSF_CRIGR : 255- 265: ckhvk Gi-LlygppGcG ktlla NSF_DROME : 255- 265: ckhvk Gi-LlygppGtG ktlma NSF_HUMAN : 255- 265: cihvk Gi-LlygppGcG ktlla NSF_MOUSE : 255- 265: ckhvk Gi-LlygppGcG ktlla PAS1_PICPA : 517- 528: skias GgsLlfgtsGsG kslvi PAS1_PICPA : 518- 528: kiasg Gs-LlfgtsGsG kslvi PAS1_PICPA : 835- 845: lrlrs Gi-LlygypGcG ktlla PAS1_YEAST : 145- 156: rivtp GetLicyleGiV tkfki PAS1_YEAST : 733- 743: lrlrs Gi-LlygypGcG ktlla PAS5_PICPA : 854- 864: ikkrs Gi-LfygppGtG ktlla PAS5_PICPA : 885- 896: ffsvk GpeLlnmyiGeS eanvr PAS8_YEAST : 767- 777: mkkrs Gi-LfygppGtG ktlma PAS8_YEAST : 798- 809: ffsvk GpeLlnmyiGeS eanvr PAY4_YARLI : 755- 765: vkkrs Gi-LfygppGtG ktlla PAY4_YARLI : 786- 797: ffsvk GpeLlnmyiGeS eanvr PRS4_HUMAN : 252- 263: flrvv GseLiqkylGdG pklvr PRS4_ORYSA : 260- 271: flrvv GseLiqkylGdG pklvr PRS4_SCHPO : 258- 269: flrvv GseLiqkylGdG prlvr PRS4_YEAST : 249- 260: flriv GseLiqkylGdG prlcr PRS6_CAEEL : 197- 207: idppr Gv-LmygppGcG ktmla PRS6_DICDI : 186- 196: idppr Gv-LlygppGtG ktmla PRS6_HUMAN : 201- 211: idppr Gv-LmygppGcG ktmla PRS6_MANSE : 198- 208: ieppr Gv-LmygppGcG ktmla PRS6_YEAST : 208- 218: idppr Gv-LlygppGtG ktmlv PRS7_HUMAN : 211- 221: ieppk Gv-LlfgppGtG ktlca PRS7_HUMAN : 242- 253: firvi GseLvqkyvGeG armvr PRS7_MOUSE : 211- 221: ieppk Gv-LlfgppGtG ktlca PRS7_MOUSE : 242- 253: firvi GseLvqkyvGeG armvr PRS7_XENLA : 211- 221: ieppk Gv-LlfgppGtG ktlca PRS7_XENLA : 242- 253: firvi GseLvqkyvGeG armvr PRS7_YEAST : 245- 255: idppk Gi-LlygppGtG ktlca PRS7_YEAST : 276- 287: firvi GseLvqkyvGeG armvr SAV_SULAC : 248- 258: idppk Gi-LlygppGtG ktlla SAV_SULAC : 523- 533: vtppk Gi-LlfgppGtG ktmla SC18_CANAL : 312- 322: ykhck Gl-LlygppGtG ktlia SC18_YEAST : 276- 286: ishvk Gl-LlygppGtG ktlia SKD1_MOUSE : 169- 179: rtpwr Gi-LlfgppGtG ksyla SKD1_SCHPO : 164- 174: rkpws Gi-LlygppGtG ksyla SUG1_DICDI : 167- 177: iaqpk Gv-LlygppGtG ktlla SUG1_DICDI : 198- 209: firvs GseLvqkyiGeG srmvr SUG1_XENLA : 180- 190: iaqpk Gv-LlygppGtG ktlla SUG1_XENLA : 211- 222: firvs GseLvqkfiGeG armvr SUG1_YEAST : 215- 226: firvs GaeLvqkyiGeG srmvr TBP1_HUMAN : 222- 232: iqppk Gv-LmygppGtG ktlla TBP1_HUMAN : 253- 264: flkla GpqLvqmfiGdG aklvr TBP1_ORYSA : 212- 222: irppk Gv-LlygppGtG ktlma TBP1_ORYSA : 243- 254: flkla GpqLvqmfiGdG aklvr TBP1_YEAST : 217- 227: irapk Ga-LmygppGtG ktlla TBP6_YEAST : 210- 220: repvr Gm-LlfgppGtG ktmia TBP7_YEAST : 448- 458: nitpr Gv-LfhgppGtG ktlma TERA_MOUSE : 240- 250: vkppr Gi-LlygppGtG ktlia TERA_MOUSE : 513- 523: mtpsk Gv-LfygppGcG ktlla TERA_MOUSE : 544- 555: fisik GpeLltmwfGeS eanvr TERA_PIG : 240- 250: vkppr Gi-LlygppGtG ktlia TERA_PIG : 513- 523: mtpsk Gv-LfygppGcG ktlla TERA_PIG : 544- 555: fisik GpeLltmwfGeS eanvr TERA_RAT : 240- 250: vkppr Gi-LlygppGtG ktlia TERA_RAT : 513- 523: mtpsk Gv-LfygppGcG ktlla TERA_RAT : 544- 555: fisik GpeLltmwfGeS eanvr TERA_XENLA : 240- 250: vkppr Gi-LlygppGtG ktlia TERA_XENLA : 513- 523: mtpsk Gv-LfygppGcG ktlla TERA_XENLA : 544- 555: fisik GpeLltmwfGeS eanvr YEN7_YEAST : 640- 650: repvr Gm-LlfgppGtG ktmla YME1_SCHMA : 201- 211: aklpk Gv-LlvgppGvG ktlla YME1_YEAST : 316- 326: gklpk Gv-LltgppGtG ktlla I 9: 14.2280 107( 55) G-x-[DGPS]-x-T-x(4,5)-A Occurences: 107(55) A26A_MYCLE : 296- 305: lygpp GcGkTliak-A vansl AFG2_YEAST : 560- 569: lygpp GcSkTltak-A lates BCS1_YEAST : 270- 279: lyspp GsGkTsfiq-A lagel CC48_YEAST : 255- 265: gvlmy GpPgTgktlmA ravan CC48_YEAST : 258- 267: mygpp GtGkTlmar-A vanet CC48_YEAST : 528- 538: gvlfy GpPgTgktllA kavat CC48_YEAST : 531- 540: fygpp GtGkTllak-A vatev CDAT_PLAFA : 190- 200: gvlmh GiPgTgktsiA kaian CDAT_PLAFA : 193- 202: mhgip GtGkTsiak-A ianes CDAT_PLAFA : 600- 609: lygpp GcGkTllak-A ianec CDCH_HALSA : 230- 240: gvllh GpPgTgktllA kavan CDCH_HALSA : 233- 242: lhgpp GtGkTllak-A vanet CDCH_HALSA : 503- 513: gvlly GpPgTgktlmA kavan CDCH_HALSA : 506- 515: lygpp GtGkTlmak-A vanet FTSH_BACSU : 201- 211: gvllv GpPgTgktllA kacag FTSH_BACSU : 204- 213: lvgpp GtGkTllak-A cagea FTSH_ECOLI : 192- 202: gvlmv GpPgTgktllA kaiag FTSH_ECOLI : 195- 204: mvgpp GtGkTllak-A iagea FTSH_HAEIN : 350- 360: ppsgw GePkTqqaayA nsttn FTSH_LACLA : 233- 243: gvlle GpPgTgktllA kavag FTSH_LACLA : 236- 245: legpp GtGkTllak-A vagea LET1_SCHPO : 186- 196: gilly GpPgTgktllA ravah LET1_SCHPO : 189- 198: lygpp GtGkTllar-A vahht MEI1_CAEEL : 233- 243: amvla GpPgTgktliA raias MEI1_CAEEL : 236- 245: lagpp GtGkTliar-A iases MSP1_YEAST : 136- 145: lygpp GcGkTmlak-A lakes NSF_CRIGR : 575- 584: pdkmi GfSeTakcq-A mkkif NSF_DROME : 260- 270: gilly GpPgTgktlmA rqigt NSF_HUMAN : 575- 584: pdkmi GfSeTakcq-A mkkif NSF_MOUSE : 575- 584: pdkmi GfSeTakcq-A mkkif PAS1_PICPA : 843- 852: lygyp GcGkTllas-A vaaqc PAS1_YEAST : 741- 750: lygyp GcGkTllas-A vaqqc PAS5_PICPA : 859- 869: gilfy GpPgTgktllA kaiat PAS5_PICPA : 862- 871: fygpp GtGkTllak-A iatnf PAS8_YEAST : 772- 782: gilfy GpPgTgktlmA kaiat PAS8_YEAST : 775- 784: fygpp GtGkTlmak-A iatnf PAY4_YARLI : 760- 770: gilfy GpPgTgktllA kaiat PAY4_YARLI : 763- 772: fygpp GtGkTllak-A iattf PRS4_HUMAN : 226- 236: gvily GpPgTgktllA kavan PRS4_HUMAN : 229- 238: lygpp GtGkTllak-A vanqt PRS4_ORYSA : 234- 244: gvily GePgTgktllA kavan PRS4_ORYSA : 237- 246: lygep GtGkTllak-A vanst PRS4_SCHPO : 232- 242: gvily GaPgTgktllA kavan PRS4_SCHPO : 235- 244: lygap GtGkTllak-A vanqt PRS4_YEAST : 223- 233: gvily GaPgTgktllA kavan PRS4_YEAST : 226- 235: lygap GtGkTllak-A vanqt PRS6_CAEEL : 205- 214: mygpp GcGkTmlak-A vaant PRS6_DICDI : 191- 201: gvlly GpPgTgktmlA kavah PRS6_DICDI : 194- 203: lygpp GtGkTmlak-A vahht PRS6_HUMAN : 209- 218: mygpp GcGkTmlak-A vahht PRS6_MANSE : 206- 215: mygpp GcGkTmlan-A vahht PRS6_YEAST : 216- 225: lygpp GtGkTmlvk-A vanst PRS7_HUMAN : 216- 226: gvllf GpPgTgktlcA ravan PRS7_HUMAN : 219- 228: lfgpp GtGkTlcar-A vanrt PRS7_MOUSE : 216- 226: gvllf GpPgTgktlcA ravan PRS7_MOUSE : 219- 228: lfgpp GtGkTlcar-A vanrt PRS7_XENLA : 216- 226: gvllf GpPgTgktlcA ravan PRS7_XENLA : 219- 228: lfgpp GtGkTlcar-A vanrt PRS7_YEAST : 250- 260: gilly GpPgTgktlcA ravan PRS7_YEAST : 253- 262: lygpp GtGkTlcar-A vanrt SAV_SULAC : 253- 263: gilly GpPgTgktllA ralrn SAV_SULAC : 256- 265: lygpp GtGkTllar-A lrnei SAV_SULAC : 528- 538: gillf GpPgTgktmlA kavat SAV_SULAC : 531- 540: lfgpp GtGkTmlak-A vates SC18_CANAL : 317- 327: gllly GpPgTgktliA rklsk SC18_YEAST : 281- 291: gllly GpPgTgktliA rkigt SKD1_MOUSE : 174- 184: gillf GpPgTgksylA kavat SKD1_SCHPO : 169- 179: gilly GpPgTgksylA kavat SUG1_DICDI : 172- 182: gvlly GpPgTgktllA ravah SUG1_DICDI : 175- 184: lygpp GtGkTllar-A vahht SUG1_XENLA : 185- 195: gvlly GpPgTgktllA ravah SUG1_XENLA : 188- 197: lygpp GtGkTllar-A vahht SUG1_YEAST : 189- 199: gvily GpPgTgktllA ravah SUG1_YEAST : 192- 201: lygpp GtGkTllar-A vahht TBP1_HUMAN : 227- 237: gvlmy GpPgTgktllA racaa TBP1_HUMAN : 230- 239: mygpp GtGkTllar-A caaqt TBP1_ORYSA : 217- 227: gvlly GpPgTgktlmA racaa TBP1_ORYSA : 220- 229: lygpp GtGkTlmar-A caaqt TBP1_YEAST : 222- 232: galmy GpPgTgktllA racaa TBP1_YEAST : 225- 234: mygpp GtGkTllar-A caaqt TBP6_YEAST : 215- 225: gmllf GpPgTgktmiA kavat TBP6_YEAST : 218- 227: lfgpp GtGkTmiak-A vates TBP6_YEAST : 389- 399: tegfs GsDlTslakeA amepi TBP7_YEAST : 453- 463: gvlfh GpPgTgktlmA ralaa TBP7_YEAST : 456- 465: fhgpp GtGkTlmar-A laasc TERA_MOUSE : 245- 255: gilly GpPgTgktliA ravan TERA_MOUSE : 248- 257: lygpp GtGkTliar-A vanet TERA_MOUSE : 521- 530: fygpp GcGkTllak-A ianec TERA_MOUSE : 684- 694: tngfs GaDlTeicqrA cklai TERA_PIG : 245- 255: gilly GpPgTgktliA ravan TERA_PIG : 248- 257: lygpp GtGkTliar-A vanet TERA_PIG : 521- 530: fygpp GcGkTllak-A ianec TERA_PIG : 684- 694: tngfs GaDlTeicqrA cklai TERA_RAT : 245- 255: gilly GpPgTgktliA ravan TERA_RAT : 248- 257: lygpp GtGkTliar-A vanet TERA_RAT : 521- 530: fygpp GcGkTllak-A ianec TERA_RAT : 684- 694: tngfs GaDlTeicqrA cklai TERA_XENLA : 245- 255: gilly GpPgTgktliA ravan TERA_XENLA : 248- 257: lygpp GtGkTliar-A vanet TERA_XENLA : 521- 530: fygpp GcGkTllak-A ianec TERA_XENLA : 684- 694: tngfs GaDlTeicqrA cklai YEN7_YEAST : 645- 655: gmllf GpPgTgktmlA ravat YEN7_YEAST : 648- 657: lfgpp GtGkTmlar-A vates YEN7_YEAST : 828- 838: tegys GsDiTslakdA amgpl YME1_SCHMA : 209- 218: lvgpp GvGkTllak-A vsgea YME1_YEAST : 321- 331: gvllt GpPgTgktllA ratag YME1_YEAST : 324- 333: ltgpp GtGkTllar-A tagea J 10: 14.2096 66( 55) A-x(2)-R-x(0,2)-R-[FIL] Occurences: 66(55) A26A_MYCLE : 424- 431: dmidp AilRpgRL dvkik AFG2_YEAST : 398- 405: nsvdp AlrRpgRF dqeve AFG2_YEAST : 668- 675: deida AllRpgRL drhiy BCS1_YEAST : 373- 380: eklda AimRpgRI dykvf CC48_YEAST : 366- 373: nsidp AlrRfgRF drevd CC48_YEAST : 642- 649: dqidp AilRpgRL dqliy CDAT_PLAFA : 301- 308: nsidp AlrRfgRF dreie CDCH_HALSA : 341- 348: davdp AlrRpgRF dreie CDCH_HALSA : 615- 622: diidp AliRsgRF drlvq FTSH_BACSU : 315- 322: dildp AllRpgRF drqit FTSH_ECOLI : 306- 313: dvldp AllRpgRF drqvv FTSH_HAEIN : 51- 58: dvldp AltRpgRF drqvv FTSH_LACLA : 348- 355: dvldp AllRpgRF drkvl LET1_SCHPO : 301- 308: dildp AllRpgRI drkie MEI1_CAEEL : 348- 353: welde AlrR--RF ekrif MSP1_YEAST : 244- 249: ndidd AflR--RL pkrfl NSF_CRIGR : 382- 389: dlide AllRpgRL evkme NSF_DROME : 300- 305: vgese AnvR--RL faeae NSF_DROME : 382- 389: dmide AllRpgRL evqme NSF_HUMAN : 382- 389: dlide AllRpgRL evkme NSF_MOUSE : 382- 389: dlide AllRpgRL evkme PAS1_PICPA : 50- 55: vphqr AaqR--RI aycgw PAS1_PICPA : 951- 958: dlids AllRpgRL dksvi PAS1_YEAST : 849- 856: dlids AllRpgRL dksvi PAS5_PICPA : 975- 982: dllde AllRpgRF dkmly PAS8_YEAST : 886- 893: dllde AllRpgRF dklly PAY4_YARLI : 875- 882: dllde AllRpgRF dkmly PAY4_YARLI : 903- 910: qtime AltRkfRL aadvs PRS4_HUMAN : 340- 347: etldp AliRpgRI drkie PRS4_ORYSA : 348- 355: esldp AllRpgRI drkie PRS4_SCHPO : 347- 354: sdldp AliRpgRI drkil PRS4_YEAST : 337- 344: etldp AliRpgRI drkil PRS6_CAEEL : 316- 323: dtldp AllRpgRL drkie PRS6_DICDI : 305- 312: dtldp AllRpgRL drkie PRS6_HUMAN : 320- 327: dtldp AllRpgRL drkie PRS6_MANSE : 317- 324: dtldp AllRpgRL drkie PRS6_YEAST : 327- 334: dtldp AllRpgRL drkie PRS7_HUMAN : 330- 337: dtldp AlmRpgRL drkie PRS7_MOUSE : 330- 337: dtldp AlmRpgRL drkie PRS7_XENLA : 330- 337: dtldp AlmRpgRL drkie PRS7_YEAST : 364- 371: ntldp AllRpgRI drkve SAV_SULAC : 364- 371: daidp AlrRpgRF dreie SAV_SULAC : 640- 647: dildp AllRpgRF drliy SC18_CANAL : 440- 447: dlidt AllRpgRF eiqie SC18_YEAST : 403- 410: dlids AllRpgRF evqve SKD1_MOUSE : 287- 292: wvlds AirR--RF ekriy SKD1_SCHPO : 281- 286: wtlds AirR--RF ekriy SUG1_DICDI : 287- 294: dildp AllRpgRI drkie SUG1_XENLA : 299- 306: dilds AllRpgRI drkie SUG1_YEAST : 303- 310: dildp AllRpgRI drkie TBP1_HUMAN : 341- 348: dildp AllRsgRL drkie TBP1_ORYSA : 331- 338: dildp AlmRsgRL drkie TBP1_YEAST : 336- 343: dvldp AllRsgRL drkie TBP6_YEAST : 338- 343: waidd AarR--RF srkly TBP7_YEAST : 569- 576: davdp AlrRpgRF drefy TERA_MOUSE : 356- 363: nsidp AlrRfgRF drevd TERA_MOUSE : 632- 639: diidp AilRpgRL dqliy TERA_PIG : 356- 363: nsidp AlrRfgRF drevd TERA_PIG : 632- 639: diidp AilRpgRL dqliy TERA_RAT : 356- 363: nsidp AlrRfgRF drevd TERA_RAT : 632- 639: diidp AilRpgRL dqliy TERA_XENLA : 356- 363: nsidp AlrRfgRF drevd TERA_XENLA : 632- 639: diidp AilRpgRL dqliy YEN7_YEAST : 777- 782: wside AarR--RF vrrqy YME1_SCHMA : 318- 325: evldk AllRpgRF dvqih YME1_YEAST : 432- 439: ealdk AltRpgRF dkvvn K 11: 14.1979 72( 55) P-G-x(1,2)-G-x-[DEST] Occurences: 72(55) A26A_MYCLE : 295- 300: llygp PGc-GkT liaka AFG2_YEAST : 288- 293: llhgp PGt-GkT mllrv BCS1_YEAST : 269- 274: llysp PGs-GkT sfiqa CC48_YEAST : 257- 262: lmygp PGt-GkT lmara CC48_YEAST : 530- 535: lfygp PGt-GkT llaka CDAT_PLAFA : 192- 197: lmhgi PGt-GkT siaka CDAT_PLAFA : 599- 604: llygp PGc-GkT llaka CDCH_HALSA : 232- 237: llhgp PGt-GkT llaka CDCH_HALSA : 505- 510: llygp PGt-GkT lmaka CDCH_HALSA : 569- 574: ldsla PGr-GqT ggnnv CDCH_HALSA : 631- 637: vqvgq PGieGrE qilki FTSH_BACSU : 203- 208: llvgp PGt-GkT llaka FTSH_BACSU : 363- 369: iamrt PGfsGaD lenll FTSH_ECOLI : 194- 199: lmvgp PGt-GkT llaka FTSH_ECOLI : 354- 360: iargt PGfsGaD lanlv FTSH_HAEIN : 99- 105: largt PGysGaD lanlv FTSH_LACLA : 235- 240: llegp PGt-GkT llaka FTSH_LACLA : 396- 402: vatqt PGyvGaD lenvl LET1_SCHPO : 188- 193: llygp PGt-GkT llara MEI1_CAEEL : 235- 240: vlagp PGt-GkT liara MSP1_YEAST : 135- 140: llygp PGc-GkT mlaka NSF_CRIGR : 262- 267: llygp PGc-GkT llarq NSF_DROME : 262- 267: llygp PGt-GkT lmarq NSF_HUMAN : 262- 267: llygp PGc-GkT llarq NSF_MOUSE : 262- 267: llygp PGc-GkT llarq PAS1_PICPA : 842- 847: llygy PGc-GkT llasa PAS1_YEAST : 740- 745: llygy PGc-GkT llasa PAS5_PICPA : 861- 866: lfygp PGt-GkT llaka PAS8_YEAST : 774- 779: lfygp PGt-GkT lmaka PAY4_YARLI : 762- 767: lfygp PGt-GkT llaka PRS4_HUMAN : 228- 233: ilygp PGt-GkT llaka PRS4_ORYSA : 236- 241: ilyge PGt-GkT llaka PRS4_SCHPO : 234- 239: ilyga PGt-GkT llaka PRS4_YEAST : 225- 230: ilyga PGt-GkT llaka PRS6_CAEEL : 204- 209: lmygp PGc-GkT mlaka PRS6_DICDI : 193- 198: llygp PGt-GkT mlaka PRS6_HUMAN : 208- 213: lmygp PGc-GkT mlaka PRS6_MANSE : 205- 210: lmygp PGc-GkT mlana PRS6_YEAST : 215- 220: llygp PGt-GkT mlvka PRS7_HUMAN : 218- 223: llfgp PGt-GkT lcara PRS7_MOUSE : 218- 223: llfgp PGt-GkT lcara PRS7_XENLA : 218- 223: llfgp PGt-GkT lcara PRS7_YEAST : 252- 257: llygp PGt-GkT lcara SAV_SULAC : 255- 260: llygp PGt-GkT llara SAV_SULAC : 530- 535: llfgp PGt-GkT mlaka SC18_CANAL : 319- 324: llygp PGt-GkT liark SC18_CANAL : 602- 607: llygp PGv-GkT siatt SC18_YEAST : 283- 288: llygp PGt-GkT liark SKD1_MOUSE : 176- 181: llfgp PGt-GkS ylaka SKD1_SCHPO : 171- 176: llygp PGt-GkS ylaka SUG1_DICDI : 174- 179: llygp PGt-GkT llara SUG1_XENLA : 187- 192: llygp PGt-GkT llara SUG1_XENLA : 347- 353: iaelm PGasGaE vkgvc SUG1_YEAST : 191- 196: ilygp PGt-GkT llara TBP1_HUMAN : 229- 234: lmygp PGt-GkT llara TBP1_ORYSA : 219- 224: llygp PGt-GkT lmara TBP1_YEAST : 224- 229: lmygp PGt-GkT llara TBP6_YEAST : 217- 222: llfgp PGt-GkT miaka TBP7_YEAST : 455- 460: lfhgp PGt-GkT lmara TERA_MOUSE : 247- 252: llygp PGt-GkT liara TERA_MOUSE : 520- 525: lfygp PGc-GkT llaka TERA_PIG : 247- 252: llygp PGt-GkT liara TERA_PIG : 520- 525: lfygp PGc-GkT llaka TERA_RAT : 247- 252: llygp PGt-GkT liara TERA_RAT : 520- 525: lfygp PGc-GkT llaka TERA_XENLA : 247- 252: llygp PGt-GkT liara TERA_XENLA : 520- 525: lfygp PGc-GkT llaka TERA_XENLA : 785- 791: gagps PGagGgS ggghf YEN7_YEAST : 647- 652: llfgp PGt-GkT mlara YME1_SCHMA : 208- 213: llvgp PGv-GkT llaka YME1_YEAST : 323- 328: lltgp PGt-GkT llara YME1_YEAST : 480- 486: iargt PGlsGaE lanlv L 12: 13.8927 71( 55) D-x(0,1)-A-x(2)-R-x(4)-[DEQRS] Occurences: 71(55) A26A_MYCLE : 422- 432: redmi DpAilRpgrlD vkiki AFG2_YEAST : 396- 406: rpnsv DpAlrRpgrfD qevei AFG2_YEAST : 666- 676: rpdei DaAllRpgrlD rhiyv BCS1_YEAST : 371- 381: hpekl DaAimRpgriD ykvfv CC48_YEAST : 364- 374: rpnsi DpAlrRfgrfD revdi CC48_YEAST : 383- 392: digip D-AtgRlevlR ihtkn CC48_YEAST : 640- 650: rpdqi DpAilRpgrlD qliyv CDAT_PLAFA : 299- 309: rpnsi DpAlrRfgrfD reiei CDCH_HALSA : 339- 349: rvdav DpAlrRpgrfD reiei CDCH_HALSA : 613- 623: rpdii DpAliRsgrfD rlvqv FTSH_BACSU : 313- 323: radil DpAllRpgrfD rqitv FTSH_ECOLI : 304- 314: rpdvl DpAllRpgrfD rqvvv FTSH_HAEIN : 49- 59: rpdvl DpAltRpgrfD rqvvv FTSH_LACLA : 346- 356: rsdvl DpAllRpgrfD rkvlv LET1_SCHPO : 299- 309: ridil DpAllRpgriD rkief MEI1_CAEEL : 346- 356: ipwel DeAlrRrfekR ifipl MSP1_YEAST : 70- 79: aevtl D-AyeRtilsS ivtpd MSP1_YEAST : 242- 252: rindi DdAflRrlpkR flvsl MSP1_YEAST : 243- 252: indid D-AflRrlpkR flvsl NSF_CRIGR : 380- 390: rpdli DeAllRpgrlE vkmei NSF_DROME : 380- 390: rrdmi DeAllRpgrlE vqmei NSF_HUMAN : 380- 390: rpdli DeAllRpgrlE vkmei NSF_MOUSE : 380- 390: rpdli DeAllRpgrlE vkmei PAS1_PICPA : 5- 14: mnsi D-AvvRysplR nnlcn PAS1_PICPA : 949- 959: rpdli DsAllRpgrlD ksvic PAS1_YEAST : 847- 857: rpdli DsAllRpgrlD ksvic PAS5_PICPA : 973- 983: rpdll DeAllRpgrfD kmlyl PAS8_YEAST : 884- 894: rpdll DeAllRpgrfD kllyl PAY4_YARLI : 873- 883: rpdll DeAllRpgrfD kmlyl PRS4_HUMAN : 338- 348: rietl DpAliRpgriD rkief PRS4_ORYSA : 346- 356: riesl DpAllRpgriD rkief PRS4_SCHPO : 345- 355: risdl DpAliRpgriD rkilf PRS4_YEAST : 335- 345: kietl DpAliRpgriD rkilf PRS6_CAEEL : 314- 324: rqdtl DpAllRpgrlD rkief PRS6_DICDI : 303- 313: rqdtl DpAllRpgrlD rkief PRS6_HUMAN : 318- 328: radtl DpAllRpgrlD rkief PRS6_MANSE : 315- 325: radtl DpAllRpgrlD rkief PRS6_YEAST : 325- 335: radtl DpAllRpgrlD rkief PRS7_HUMAN : 328- 338: rpdtl DpAlmRpgrlD rkief PRS7_MOUSE : 328- 338: rpdtl DpAlmRpgrlD rkief PRS7_XENLA : 328- 338: rpdtl DpAlmRpgrlD rkief PRS7_YEAST : 362- 372: rpntl DpAllRpgriD rkvef SAV_SULAC : 362- 372: rpdai DpAlrRpgrfD reiei SAV_SULAC : 638- 648: rpdil DpAllRpgrfD rliyv SC18_CANAL : 438- 448: rldli DtAllRpgrfE iqiei SC18_YEAST : 401- 411: rkdli DsAllRpgrfE vqvei SKD1_MOUSE : 285- 295: ipwvl DsAirRrfekR iyipl SKD1_SCHPO : 279- 289: ipwtl DsAirRrfekR iyipl SUG1_DICDI : 285- 295: ridil DpAllRpgriD rkief SUG1_XENLA : 297- 307: ridil DsAllRpgriD rkief SUG1_YEAST : 301- 311: rldil DpAllRpgriD rkief TBP1_HUMAN : 339- 349: rvdil DpAllRsgrlD rkief TBP1_ORYSA : 329- 339: radil DpAlmRsgrlD rkief TBP1_YEAST : 334- 344: rvdvl DpAllRsgrlD rkief TBP6_YEAST : 176- 186: kvywe DiAglRnaknS lkeav TBP7_YEAST : 567- 577: rpdav DpAlrRpgrfD refyf TERA_MOUSE : 354- 364: rpnsi DpAlrRfgrfD revdi TERA_MOUSE : 373- 382: digip D-AtgRleilQ ihtkn TERA_MOUSE : 630- 640: rpdii DpAilRpgrlD qliyi TERA_PIG : 354- 364: rpnsi DpAlrRfgrfD revdi TERA_PIG : 373- 382: digip D-AtgRleilQ ihtkn TERA_PIG : 630- 640: rpdii DpAilRpgrlD qliyi TERA_RAT : 354- 364: rpnsi DpAlrRfgrfD revdi TERA_RAT : 373- 382: digip D-AtgRleilQ ihtkn TERA_RAT : 630- 640: rpdii DpAilRpgrlD qliyi TERA_XENLA : 354- 364: rpnsi DpAlrRfgrfD revdi TERA_XENLA : 630- 640: rpdii DpAilRpgrlD qliyi YEN7_YEAST : 775- 785: lpwsi DeAarRrfvrR qyipl YME1_SCHMA : 95- 104: qlrlv D-AyrRgfqsS tdsgk YME1_SCHMA : 316- 326: qaevl DkAllRpgrfD vqihv YME1_YEAST : 430- 440: fpeal DkAltRpgrfD kvvnv M 13: 13.1290 72( 55) D-x(1,3)-D-[ADGSTV]-x(4)-R Occurences: 72(55) A26A_MYCLE : 110- 120: laahd DetvDVftsgR kmrlt A26A_MYCLE : 371- 380: vivff Dem-DSifrtR gtgvs AFG2_YEAST : 345- 354: siifi Dei-DSiapnR andds AFG2_YEAST : 616- 625: siiff Dei-DAlspdR dgsst BCS1_YEAST : 320- 328: illle Di--DAafnkR sqtge CC48_YEAST : 314- 323: aiifi Dei-DSiapkR dktng CC48_YEAST : 587- 596: tvvfl Del-DSiakaR ggslg CDAT_PLAFA : 249- 258: ciifi Dei-DSiankR sksnn CDAT_PLAFA : 656- 665: ciiff Dei-DSlakeR nsntn CDCH_HALSA : 289- 298: siifi Del-DSiapkR edvtg CDCH_HALSA : 562- 571: tviff Del-DSlapgR gqtgg FTSH_BACSU : 260- 269: clifi Dei-DAvgrqR gaglg FTSH_ECOLI : 251- 260: ciifi Dei-DAvgrqR gaglg FTSH_ECOLI : 343- 351: vplap Di--DAaiiaR gtpgf FTSH_HAEIN : 88- 96: vsvaq Dv--DAmtlaR gtpgy FTSH_LACLA : 292- 301: siifi Dei-DAvgrqR gaglg LET1_SCHPO : 245- 254: siifm Dei-DSigssR sdssg MEI1_CAEEL : 292- 301: siifi Dei-DTlggqR gnsge MSP1_YEAST : 192- 201: ciifi Dei-DSflreR sstdh MSP1_YEAST : 240- 248: tnrin Di--DDaflrR lpkrf NSF_CRIGR : 328- 337: hiiif Dei-DAickqR gsmag NSF_DROME : 328- 337: hiiif Dei-DAickqR gsvag NSF_HUMAN : 328- 337: hiiif Dei-DAickqR gsmag NSF_MOUSE : 328- 337: hiiif Dei-DAickqR gsmag PAS1_PICPA : 795- 805: klqks DvrwDDigglR daksi PAS1_PICPA : 899- 908: cilff Def-DSiapkR ghdst PAS1_YEAST : 797- 806: cilff Def-DSiapkR ghdst PAS5_PICPA : 100- 110: idyss DftvDSgyvaR vdslv PAS5_PICPA : 918- 927: cvvff Del-DSvapkR gnqgd PAS8_YEAST : 831- 840: cviff Dei-DSvapkR gnqgd PAY4_YARLI : 693- 702: qltps Dfd-DAiadaR qkysd PAY4_YARLI : 819- 828: cvvff Del-DSvapqR rnqgd PRS4_HUMAN : 285- 294: sivfi Dei-DAigtkR ydsns PRS4_ORYSA : 293- 302: sivfi Dei-DAvgtkR ydahs PRS4_SCHPO : 291- 300: sivfi Dei-DAigtkR ydaqs PRS4_YEAST : 282- 291: sivfi Dei-DAigtkR ydsns PRS6_CAEEL : 261- 270: siifi Dei-DAiatkR fdaqt PRS6_DICDI : 250- 259: aiifi Dei-DAiatkR fdaqt PRS6_HUMAN : 265- 274: aiifi Dei-DAiatkR fdaqt PRS6_MANSE : 262- 271: aiifi Dei-DAiatkR fdaqt PRS6_YEAST : 272- 281: siifi Dev-DSiatkR fdaqt PRS7_HUMAN : 275- 284: cliff Dei-DAiggaR fddga PRS7_MOUSE : 275- 284: cliff Dem-DAiggaR fddga PRS7_XENLA : 275- 284: cliff Dei-DAiggaR fddga PRS7_YEAST : 309- 318: ciiff Dei-DAvggaR fddga SAV_SULAC : 312- 321: siifi Dei-DAiapkR edvtg SAV_SULAC : 587- 596: tviff Dei-DSiapiR glstd SC18_CANAL : 385- 394: hviif Del-DSvfkqR gsgks SC18_YEAST : 349- 358: hiiif Del-DSvfkqR gsrgd SKD1_MOUSE : 234- 243: siifi Dei-DSlcgsR senes SKD1_SCHPO : 228- 237: siifi Dei-DSlcgsR seges SUG1_DICDI : 231- 240: siifm Dei-DSigssR gesgs SUG1_XENLA : 99- 108: vdkni Din-DVtpncR valrn SUG1_YEAST : 248- 257: siifm Dei-DSigstR vegsg TBP1_HUMAN : 286- 295: siifi Del-DAigtkR fdsek TBP1_ORYSA : 276- 285: ciifi Dei-DAigtkR fdsev TBP1_YEAST : 281- 290: tiifi Del-DAigtkR fdsek TBP6_YEAST : 274- 283: siifi Dei-DSmltaR sdnen TBP7_YEAST : 149- 157: edeyl De--DSkdnnR rrraa TBP7_YEAST : 178- 186: ddeey De--DDeegdR ishsa TBP7_YEAST : 517- 526: siiff Dei-DGlapvR sskqe TERA_MOUSE : 304- 313: aiifi Del-DAiapkR ekthg TERA_MOUSE : 577- 586: cvlff Del-DSiakaR ggnig TERA_PIG : 304- 313: aiifi Del-DAiapkR ekthg TERA_PIG : 577- 586: cvlff Del-DSiakaR ggnig TERA_RAT : 304- 313: aiifi Del-DAiapkR ekthg TERA_RAT : 577- 586: cvlff Del-DSiakaR ggnig TERA_XENLA : 304- 313: aiifi Del-DAiapkR ekthg TERA_XENLA : 577- 586: cvlff Del-DSiakaR ggnig YEN7_YEAST : 704- 713: siifv Dei-DSimgsR nnene YME1_SCHMA : 265- 274: clvfi Dei-DSvggnR tfsph YME1_YEAST : 380- 389: aiifi Del-DAiggkR npkdq N 14: 12.0102 84( 55) D-x-A-x(0,1)-L Occurences: 84(55) A26A_MYCLE : 22- 26: gmssg DiAeL eqlrr A26A_MYCLE : 422- 426: redmi DpAiL rpgrl AFG2_YEAST : 396- 399: rpnsv DpA-L rrpgr AFG2_YEAST : 666- 669: rpdei DaA-L lrpgr AFG2_YEAST : 666- 670: rpdei DaAlL rpgrl BCS1_YEAST : 193- 196: lneak DiA-L ktteg CC48_YEAST : 364- 367: rpnsi DpA-L rrfgr CC48_YEAST : 420- 424: gyvga DiAsL cseaa CC48_YEAST : 640- 644: rpdqi DpAiL rpgrl CDAT_PLAFA : 299- 302: rpnsi DpA-L rrfgr CDAT_PLAFA : 355- 359: gyvga DlAqL cfeaa CDCH_HALSA : 339- 342: rvdav DpA-L rrpgr CDCH_HALSA : 613- 616: rpdii DpA-L irsgr FTSH_BACSU : 313- 316: radil DpA-L lrpgr FTSH_BACSU : 313- 317: radil DpAlL rpgrf FTSH_ECOLI : 304- 307: rpdvl DpA-L lrpgr FTSH_ECOLI : 304- 308: rpdvl DpAlL rpgrf FTSH_ECOLI : 360- 364: gfsga DlAnL vneaa FTSH_HAEIN : 49- 52: rpdvl DpA-L trpgr FTSH_HAEIN : 105- 109: gysga DlAnL vneaa FTSH_LACLA : 346- 349: rsdvl DpA-L lrpgr FTSH_LACLA : 346- 350: rsdvl DpAlL rpgrf LET1_SCHPO : 299- 302: ridil DpA-L lrpgr LET1_SCHPO : 299- 303: ridil DpAlL rpgri MEI1_CAEEL : 346- 349: ipwel DeA-L rrrfe MSP1_YEAST : 242- 246: rindi DdAfL rrlpk NSF_CRIGR : 380- 383: rpdli DeA-L lrpgr NSF_CRIGR : 380- 384: rpdli DeAlL rpgrl NSF_DROME : 380- 383: rrdmi DeA-L lrpgr NSF_DROME : 380- 384: rrdmi DeAlL rpgrl NSF_HUMAN : 380- 383: rpdli DeA-L lrpgr NSF_HUMAN : 380- 384: rpdli DeAlL rpgrl NSF_MOUSE : 380- 383: rpdli DeA-L lrpgr NSF_MOUSE : 380- 384: rpdli DeAlL rpgrl PAS1_PICPA : 775- 778: qkdnf DsA-L sgyip PAS1_PICPA : 949- 952: rpdli DsA-L lrpgr PAS1_PICPA : 949- 953: rpdli DsAlL rpgrl PAS1_YEAST : 237- 241: vvyis DgAqL psqkg PAS1_YEAST : 847- 850: rpdli DsA-L lrpgr PAS1_YEAST : 847- 851: rpdli DsAlL rpgrl PAS5_PICPA : 973- 976: rpdll DeA-L lrpgr PAS5_PICPA : 973- 977: rpdll DeAlL rpgrf PAS8_YEAST : 884- 887: rpdll DeA-L lrpgr PAS8_YEAST : 884- 888: rpdll DeAlL rpgrf PAY4_YARLI : 873- 876: rpdll DeA-L lrpgr PAY4_YARLI : 873- 877: rpdll DeAlL rpgrf PRS4_HUMAN : 338- 341: rietl DpA-L irpgr PRS4_ORYSA : 346- 349: riesl DpA-L lrpgr PRS4_ORYSA : 346- 350: riesl DpAlL rpgri PRS4_SCHPO : 345- 348: risdl DpA-L irpgr PRS4_YEAST : 335- 338: kietl DpA-L irpgr PRS6_CAEEL : 314- 317: rqdtl DpA-L lrpgr PRS6_CAEEL : 314- 318: rqdtl DpAlL rpgrl PRS6_DICDI : 303- 306: rqdtl DpA-L lrpgr PRS6_DICDI : 303- 307: rqdtl DpAlL rpgrl PRS6_HUMAN : 318- 321: radtl DpA-L lrpgr PRS6_HUMAN : 318- 322: radtl DpAlL rpgrl PRS6_MANSE : 315- 318: radtl DpA-L lrpgr PRS6_MANSE : 315- 319: radtl DpAlL rpgrl PRS6_YEAST : 325- 328: radtl DpA-L lrpgr PRS6_YEAST : 325- 329: radtl DpAlL rpgrl PRS7_HUMAN : 29- 32: aldeg DiA-L lktyg PRS7_HUMAN : 29- 33: aldeg DiAlL ktygq PRS7_HUMAN : 328- 331: rpdtl DpA-L mrpgr PRS7_MOUSE : 29- 32: aldeg DiA-L lktya PRS7_MOUSE : 29- 33: aldeg DiAlL ktyaq PRS7_MOUSE : 328- 331: rpdtl DpA-L mrpgr PRS7_XENLA : 29- 32: sldeg DiA-L lktyg PRS7_XENLA : 29- 33: sldeg DiAlL ktygq PRS7_XENLA : 328- 331: rpdtl DpA-L mrpgr PRS7_YEAST : 362- 365: rpntl DpA-L lrpgr PRS7_YEAST : 362- 366: rpntl DpAlL rpgri SAV_SULAC : 362- 365: rpdai DpA-L rrpgr SAV_SULAC : 418- 422: gytga DlAaL akeaa SAV_SULAC : 638- 641: rpdil DpA-L lrpgr SAV_SULAC : 638- 642: rpdil DpAlL rpgrf SC18_CANAL : 438- 441: rldli DtA-L lrpgr SC18_CANAL : 438- 442: rldli DtAlL rpgrf SC18_YEAST : 401- 404: rkdli DsA-L lrpgr SC18_YEAST : 401- 405: rkdli DsAlL rpgrf SC18_YEAST : 491- 495: klntk DiAkL kvtre SKD1_MOUSE : 135- 139: nvkws DvAgL egake SKD1_SCHPO : 130- 134: nvrwd DiAgL enake SUG1_DICDI : 86- 90: idptv DiAkL tpstr SUG1_DICDI : 285- 288: ridil DpA-L lrpgr SUG1_DICDI : 285- 289: ridil DpAlL rpgri SUG1_XENLA : 297- 300: ridil DsA-L lrpgr SUG1_XENLA : 297- 301: ridil DsAlL rpgri SUG1_YEAST : 301- 304: rldil DpA-L lrpgr SUG1_YEAST : 301- 305: rldil DpAlL rpgri TBP1_HUMAN : 263- 267: qmfig DgAkL vrdaf TBP1_HUMAN : 339- 342: rvdil DpA-L lrsgr TBP1_HUMAN : 339- 343: rvdil DpAlL rsgrl TBP1_ORYSA : 253- 257: qmfig DgAkL vrdaf TBP1_ORYSA : 329- 332: radil DpA-L mrsgr TBP1_YEAST : 334- 337: rvdvl DpA-L lrsgr TBP1_YEAST : 334- 338: rvdvl DpAlL rsgrl TBP6_YEAST : 176- 180: kvywe DiAgL rnakn TBP7_YEAST : 567- 570: rpdav DpA-L rrpgr TBP7_YEAST : 801- 805: nvqnl DlAsL vsess TBP7_YEAST : 1002- 1006: rkppi DdAfL vhlfe TERA_MOUSE : 354- 357: rpnsi DpA-L rrfgr TERA_MOUSE : 410- 414: ghvga DlAaL cseaa TERA_MOUSE : 630- 634: rpdii DpAiL rpgrl TERA_PIG : 354- 357: rpnsi DpA-L rrfgr TERA_PIG : 410- 414: ghvga DlAaL cseaa TERA_PIG : 630- 634: rpdii DpAiL rpgrl TERA_RAT : 354- 357: rpnsi DpA-L rrfgr TERA_RAT : 410- 414: ghvga DlAaL cseaa TERA_RAT : 630- 634: rpdii DpAiL rpgrl TERA_XENLA : 354- 357: rpnsi DpA-L rrfgr TERA_XENLA : 410- 414: ghvga DlAaL cseaa TERA_XENLA : 630- 634: rpdii DpAiL rpgrl YEN7_YEAST : 606- 610: evhwd DiAgL esaky YME1_SCHMA : 316- 319: qaevl DkA-L lrpgr YME1_SCHMA : 316- 320: qaevl DkAlL rpgrf YME1_YEAST : 430- 433: fpeal DkA-L trpgr O 15: 12.0102 99( 55) G-x-P-x(2,3)-G Occurences: 99(55) A26A_MYCLE : 95- 100: evdrl GqPps-G ygvll A26A_MYCLE : 293- 298: gvlly GpPgc-G ktlia AFG2_YEAST : 286- 291: gillh GpPgt-G ktmll BCS1_YEAST : 256- 262: wysdr GiPyrrG yllys CC48_YEAST : 255- 260: gvlmy GpPgt-G ktlma CC48_YEAST : 380- 386: revdi GiPdatG rlevl CC48_YEAST : 528- 533: gvlfy GpPgt-G ktlla CDAT_PLAFA : 190- 195: gvlmh GiPgt-G ktsia CDAT_PLAFA : 597- 602: gilly GpPgc-G ktlla CDCH_HALSA : 230- 235: gvllh GpPgt-G ktlla CDCH_HALSA : 355- 361: reiei GvPdeiG reeil CDCH_HALSA : 503- 508: gvlly GpPgt-G ktlma CDCH_HALSA : 629- 635: rlvqv GqPgieG reqil FTSH_BACSU : 201- 206: gvllv GpPgt-G ktlla FTSH_ECOLI : 192- 197: gvlmv GpPgt-G ktlla FTSH_ECOLI : 320- 326: rqvvv GlPdvrG reqil FTSH_ECOLI : 352- 358: aiiar GtPgfsG adlan FTSH_HAEIN : 65- 71: rqvvv GlPdvkG reqil FTSH_HAEIN : 97- 103: mtlar GtPgysG adlan FTSH_LACLA : 170- 176: ggggg GnPmsfG ksrak FTSH_LACLA : 233- 238: gvlle GpPgt-G ktlla FTSH_LACLA : 362- 368: rkvlv GaPdvkG reavl LET1_SCHPO : 175- 181: lfesl GiPqpkG illyg LET1_SCHPO : 186- 191: gilly GpPgt-G ktlla MEI1_CAEEL : 233- 238: amvla GpPgt-G ktlia MSP1_YEAST : 133- 138: gvlly GpPgc-G ktmla NSF_CRIGR : 162- 167: psilk GePas-G krqki NSF_CRIGR : 260- 265: gilly GpPgc-G ktlla NSF_CRIGR : 396- 402: vkmei GlPdekG rlqil NSF_CRIGR : 543- 548: svlle GpPhs-G ktala NSF_DROME : 260- 265: gilly GpPgt-G ktlma NSF_DROME : 543- 548: svlva GaPns-G ktala NSF_HUMAN : 162- 167: psilk GePat-G krqki NSF_HUMAN : 260- 265: gilly GpPgc-G ktlla NSF_HUMAN : 396- 402: vkmei GlPdekG rlqil NSF_HUMAN : 543- 548: svlle GpPhs-G ktala NSF_MOUSE : 162- 167: psilk GePas-G krqki NSF_MOUSE : 260- 265: gilly GpPgc-G ktlla NSF_MOUSE : 396- 402: vkmei GlPdekG rlqil NSF_MOUSE : 543- 548: svlle GpPhs-G ktava PAS1_PICPA : 277- 283: vlvgp GtPdrtG ltssk PAS1_PICPA : 840- 845: gilly GyPgc-G ktlla PAS1_YEAST : 539- 545: pqand GdPsnnG qwdna PAS1_YEAST : 738- 743: gilly GyPgc-G ktlla PAS5_PICPA : 859- 864: gilfy GpPgt-G ktlla PAS8_YEAST : 772- 777: gilfy GpPgt-G ktlma PAY4_YARLI : 760- 765: gilfy GpPgt-G ktlla PRS4_HUMAN : 104- 110: vddlr GtPmsvG tleei PRS4_HUMAN : 226- 231: gvily GpPgt-G ktlla PRS4_ORYSA : 4- 10: mgq GtPggmG kqgga PRS4_ORYSA : 112- 118: vddlr GtPmsvG sleei PRS4_ORYSA : 234- 239: gvily GePgt-G ktlla PRS4_SCHPO : 111- 117: vdeir GtPmsvG tleei PRS4_SCHPO : 232- 237: gvily GaPgt-G ktlla PRS4_SCHPO : 440- 445: ktkde GgPag-G lyi PRS4_YEAST : 101- 107: leeir GnPlsiG tleei PRS4_YEAST : 223- 228: gvily GaPgt-G ktlla PRS6_CAEEL : 202- 207: gvlmy GpPgc-G ktmla PRS6_DICDI : 191- 196: gvlly GpPgt-G ktmla PRS6_HUMAN : 206- 211: gvlmy GpPgc-G ktmla PRS6_MANSE : 20- 25: vtdak GlPfa-G pqtfd PRS6_MANSE : 203- 208: gvlmy GpPgc-G ktmla PRS6_YEAST : 213- 218: gvlly GpPgt-G ktmlv PRS7_HUMAN : 216- 221: gvllf GpPgt-G ktlca PRS7_MOUSE : 216- 221: gvllf GpPgt-G ktlca PRS7_XENLA : 216- 221: gvllf GpPgt-G ktlca PRS7_YEAST : 250- 255: gilly GpPgt-G ktlca SAV_SULAC : 253- 258: gilly GpPgt-G ktlla SAV_SULAC : 528- 533: gillf GpPgt-G ktmla SC18_CANAL : 317- 322: gllly GpPgt-G ktlia SC18_CANAL : 600- 605: silly GpPgv-G ktsia SC18_YEAST : 281- 286: gllly GpPgt-G ktlia SKD1_MOUSE : 174- 179: gillf GpPgt-G ksyla SKD1_SCHPO : 169- 174: gilly GpPgt-G ksyla SUG1_DICDI : 172- 177: gvlly GpPgt-G ktlla SUG1_XENLA : 185- 190: gvlly GpPgt-G ktlla SUG1_YEAST : 189- 194: gvily GpPgt-G ktlla TBP1_HUMAN : 227- 232: gvlmy GpPgt-G ktlla TBP1_ORYSA : 217- 222: gvlly GpPgt-G ktlma TBP1_YEAST : 222- 227: galmy GpPgt-G ktlla TBP6_YEAST : 215- 220: gmllf GpPgt-G ktmia TBP7_YEAST : 329- 334: rlfpt GgPfg-G ndvtt TBP7_YEAST : 453- 458: gvlfh GpPgt-G ktlma TERA_MOUSE : 245- 250: gilly GpPgt-G ktlia TERA_MOUSE : 370- 376: revdi GiPdatG rleil TERA_MOUSE : 518- 523: gvlfy GpPgc-G ktlla TERA_PIG : 245- 250: gilly GpPgt-G ktlia TERA_PIG : 370- 376: revdi GiPdatG rleil TERA_PIG : 518- 523: gvlfy GpPgc-G ktlla TERA_RAT : 245- 250: gilly GpPgt-G ktlia TERA_RAT : 370- 376: revdi GiPdatG rleil TERA_RAT : 518- 523: gvlfy GpPgc-G ktlla TERA_XENLA : 245- 250: gilly GpPgt-G ktlia TERA_XENLA : 370- 376: revdi GiPdstG rleil TERA_XENLA : 518- 523: gvlfy GpPgc-G ktlla YEN7_YEAST : 645- 650: gmllf GpPgt-G ktmla YME1_SCHMA : 206- 211: gvllv GpPgv-G ktlla YME1_YEAST : 321- 326: gvllt GpPgt-G ktlla YME1_YEAST : 478- 484: tiiar GtPglsG aelan P 16: 12.0102 77( 55) G-x(0,1)-P-G Occurences: 77(55) A26A_MYCLE : 200- 203: enlld GvPG alndd A26A_MYCLE : 293- 296: gvlly GpPG cgktl A26A_MYCLE : 538- 541: svlet GqPG lriqh AFG2_YEAST : 286- 289: gillh GpPG tgktm AFG2_YEAST : 557- 560: gvlly GpPG csktl BCS1_YEAST : 137- 139: fslvp G-PG nhwir CC48_YEAST : 255- 258: gvlmy GpPG tgktl CC48_YEAST : 528- 531: gvlfy GpPG tgktl CDAT_PLAFA : 190- 193: gvlmh GiPG tgkts CDAT_PLAFA : 597- 600: gilly GpPG cgktl CDCH_HALSA : 230- 233: gvllh GpPG tgktl CDCH_HALSA : 503- 506: gvlly GpPG tgktl CDCH_HALSA : 629- 632: rlvqv GqPG iegre FTSH_BACSU : 201- 204: gvllv GpPG tgktl FTSH_ECOLI : 192- 195: gvlmv GpPG tgktl FTSH_ECOLI : 352- 355: aiiar GtPG fsgad FTSH_HAEIN : 97- 100: mtlar GtPG ysgad FTSH_LACLA : 233- 236: gvlle GpPG tgktl LET1_SCHPO : 186- 189: gilly GpPG tgktl MEI1_CAEEL : 233- 236: amvla GpPG tgktl MSP1_YEAST : 133- 136: gvlly GpPG cgktm NSF_CRIGR : 260- 263: gilly GpPG cgktl NSF_DROME : 260- 263: gilly GpPG tgktl NSF_HUMAN : 260- 263: gilly GpPG cgktl NSF_MOUSE : 260- 263: gilly GpPG cgktl PAS1_PICPA : 275- 277: vsvlv G-PG tpdrt PAS1_PICPA : 840- 843: gilly GyPG cgktl PAS1_YEAST : 738- 741: gilly GyPG cgktl PAS5_PICPA : 859- 862: gilfy GpPG tgktl PAS8_YEAST : 44- 46: rlpqy G-PG ctpgk PAS8_YEAST : 772- 775: gilfy GpPG tgktl PAY4_YARLI : 615- 617: hltks G-PG gdsir PAY4_YARLI : 760- 763: gilfy GpPG tgktl PRS4_HUMAN : 10- 12: qsggh G-PG ggkkd PRS4_HUMAN : 226- 229: gvily GpPG tgktl PRS4_ORYSA : 4- 7: mgq GtPG gmgkq PRS4_ORYSA : 14- 17: mgkqg GaPG drkpg PRS4_ORYSA : 234- 237: gvily GePG tgktl PRS4_SCHPO : 232- 235: gvily GaPG tgktl PRS4_YEAST : 223- 226: gvily GaPG tgktl PRS6_CAEEL : 202- 205: gvlmy GpPG cgktm PRS6_DICDI : 191- 194: gvlly GpPG tgktm PRS6_HUMAN : 206- 209: gvlmy GpPG cgktm PRS6_MANSE : 203- 206: gvlmy GpPG cgktm PRS6_YEAST : 213- 216: gvlly GpPG tgktm PRS7_HUMAN : 216- 219: gvllf GpPG tgktl PRS7_MOUSE : 216- 219: gvllf GpPG tgktl PRS7_XENLA : 216- 219: gvllf GpPG tgktl PRS7_YEAST : 250- 253: gilly GpPG tgktl SAV_SULAC : 253- 256: gilly GpPG tgktl SAV_SULAC : 528- 531: gillf GpPG tgktm SC18_CANAL : 317- 320: gllly GpPG tgktl SC18_CANAL : 600- 603: silly GpPG vgkts SC18_YEAST : 281- 284: gllly GpPG tgktl SKD1_MOUSE : 174- 177: gillf GpPG tgksy SKD1_MOUSE : 387- 390: tpcsp GdPG aiemt SKD1_SCHPO : 169- 172: gilly GpPG tgksy SUG1_DICDI : 172- 175: gvlly GpPG tgktl SUG1_XENLA : 185- 188: gvlly GpPG tgktl SUG1_YEAST : 189- 192: gvily GpPG tgktl TBP1_HUMAN : 227- 230: gvlmy GpPG tgktl TBP1_ORYSA : 217- 220: gvlly GpPG tgktl TBP1_YEAST : 222- 225: galmy GpPG tgktl TBP6_YEAST : 215- 218: gmllf GpPG tgktm TBP7_YEAST : 453- 456: gvlfh GpPG tgktl TERA_MOUSE : 245- 248: gilly GpPG tgktl TERA_MOUSE : 518- 521: gvlfy GpPG cgktl TERA_PIG : 245- 248: gilly GpPG tgktl TERA_PIG : 518- 521: gvlfy GpPG cgktl TERA_RAT : 245- 248: gilly GpPG tgktl TERA_RAT : 518- 521: gvlfy GpPG cgktl TERA_XENLA : 245- 248: gilly GpPG tgktl TERA_XENLA : 518- 521: gvlfy GpPG cgktl YEN7_YEAST : 645- 648: gmllf GpPG tgktm YME1_SCHMA : 206- 209: gvllv GpPG vgktl YME1_YEAST : 321- 324: gvllt GpPG tgktl YME1_YEAST : 478- 481: tiiar GtPG lsgae Q 17: 11.5102 115( 55) G-x(1,2)-G-x(2,3)-L Occurences: 115(55) A26A_MYCLE : 100- 105: gqpps Gy-Gvl-L aahdd A26A_MYCLE : 296- 301: lygpp Gc-Gkt-L iakav AFG2_YEAST : 289- 295: lhgpp Gt-GktmL lrvva AFG2_YEAST : 451- 457: askth GyvGad-L talcr BCS1_YEAST : 55- 61: pyfaa Gg-GlmiL gtgla CC48_YEAST : 258- 263: mygpp Gt-Gkt-L marav CC48_YEAST : 531- 536: fygpp Gt-Gkt-L lakav CC48_YEAST : 531- 537: fygpp Gt-GktlL akava CC48_YEAST : 691- 697: akatq GfsGad-L lyivq CC48_YEAST : 691- 698: akatq GfsGadlL yivqr CDAT_PLAFA : 350- 356: akech GyvGad-L aqlcf CDAT_PLAFA : 600- 605: lygpp Gc-Gkt-L lakai CDAT_PLAFA : 600- 606: lygpp Gc-GktlL akaia CDCH_HALSA : 17- 23: ypnds Gr-GiarL dpdtl CDCH_HALSA : 233- 238: lhgpp Gt-Gkt-L lakav CDCH_HALSA : 233- 239: lhgpp Gt-GktlL akava CDCH_HALSA : 506- 511: lygpp Gt-Gkt-L makav CDCH_HALSA : 664- 670: aerad GyvGsd-L aniar FTSH_BACSU : 204- 209: lvgpp Gt-Gkt-L lakac FTSH_BACSU : 204- 210: lvgpp Gt-GktlL akaca FTSH_BACSU : 364- 370: amrtp GfsGad-L enlln FTSH_ECOLI : 195- 200: mvgpp Gt-Gkt-L lakai FTSH_ECOLI : 195- 201: mvgpp Gt-GktlL akaia FTSH_ECOLI : 355- 361: argtp GfsGad-L anlvn FTSH_HAEIN : 100- 106: argtp GysGad-L anlvn FTSH_LACLA : 236- 241: legpp Gt-Gkt-L lakav FTSH_LACLA : 236- 242: legpp Gt-GktlL akava FTSH_LACLA : 397- 403: atqtp GyvGad-L envln FTSH_LACLA : 482- 489: tvvpr GriGgymL alpde LET1_SCHPO : 189- 194: lygpp Gt-Gkt-L larav LET1_SCHPO : 189- 195: lygpp Gt-GktlL arava LET1_SCHPO : 350- 356: aekmn GasGae-L kgvct LET1_SCHPO : 391- 398: kvlnk GdsGemsL qklfk MEI1_CAEEL : 236- 241: lagpp Gt-Gkt-L iarai MSP1_YEAST : 18- 23: lsvlv Gt-Gis-L yylvs MSP1_YEAST : 136- 142: lygpp Gc-GktmL akala MSP1_YEAST : 292- 298: adntk GfsGsd-L kelcr NSF_CRIGR : 263- 268: lygpp Gc-Gkt-L larqi NSF_CRIGR : 263- 269: lygpp Gc-GktlL arqig NSF_DROME : 58- 64: vevps GyvGfs-L vqrkw NSF_DROME : 216- 223: pdwdf GkmGiggL dkefn NSF_DROME : 263- 268: lygpp Gt-Gkt-L marqi NSF_HUMAN : 263- 268: lygpp Gc-Gkt-L larqi NSF_HUMAN : 263- 269: lygpp Gc-GktlL arqig NSF_MOUSE : 263- 268: lygpp Gc-Gkt-L larqi NSF_MOUSE : 263- 269: lygpp Gc-GktlL arqig PAS1_PICPA : 336- 343: skspk GnvGlseL lacsl PAS1_PICPA : 526- 531: lfgts Gs-Gks-L visqv PAS1_PICPA : 746- 752: seien GisGle-L tnnss PAS1_PICPA : 843- 848: lygyp Gc-Gkt-L lasav PAS1_PICPA : 843- 849: lygyp Gc-GktlL asava PAS1_PICPA : 932- 939: mdgae GldGvyvL aatsr PAS1_PICPA : 1000- 1006: agecs GfsGad-L qalay PAS1_YEAST : 464- 470: ldgkq Gi-GktrL lkeli PAS1_YEAST : 741- 746: lygyp Gc-Gkt-L lasav PAS1_YEAST : 741- 747: lygyp Gc-GktlL asava PAS1_YEAST : 830- 837: mdgae GldGvyiL aatsr PAS1_YEAST : 907- 913: aekta GfsGad-L qglcy PAS5_PICPA : 862- 867: fygpp Gt-Gkt-L lakai PAS5_PICPA : 862- 868: fygpp Gt-GktlL akaia PAS8_YEAST : 775- 780: fygpp Gt-Gkt-L makai PAY4_YARLI : 567- 572: ladys Gh-Gvl-L aatsn PAY4_YARLI : 763- 768: fygpp Gt-Gkt-L lakai PAY4_YARLI : 763- 769: fygpp Gt-GktlL akaia PRS4_HUMAN : 229- 234: lygpp Gt-Gkt-L lakav PRS4_HUMAN : 229- 235: lygpp Gt-GktlL akava PRS4_HUMAN : 261- 266: iqkyl Gd-Gpk-L vrelf PRS4_ORYSA : 237- 242: lygep Gt-Gkt-L lakav PRS4_ORYSA : 237- 243: lygep Gt-GktlL akava PRS4_ORYSA : 269- 274: iqkyl Gd-Gpk-L vrelf PRS4_SCHPO : 235- 240: lygap Gt-Gkt-L lakav PRS4_SCHPO : 235- 241: lygap Gt-GktlL akava PRS4_SCHPO : 267- 272: iqkyl Gd-Gpr-L vrqlf PRS4_YEAST : 226- 231: lygap Gt-Gkt-L lakav PRS4_YEAST : 226- 232: lygap Gt-GktlL akava PRS4_YEAST : 258- 263: iqkyl Gd-Gpr-L crqif PRS6_CAEEL : 205- 211: mygpp Gc-GktmL akava PRS6_DICDI : 194- 200: lygpp Gt-GktmL akava PRS6_DICDI : 226- 231: vqkyl Ge-Gpr-L vrdvf PRS6_HUMAN : 209- 215: mygpp Gc-GktmL akava PRS6_MANSE : 206- 212: mygpp Gc-GktmL anava PRS6_YEAST : 216- 222: lygpp Gt-GktmL vkava PRS7_HUMAN : 219- 224: lfgpp Gt-Gkt-L carav PRS7_MOUSE : 219- 224: lfgpp Gt-Gkt-L carav PRS7_XENLA : 219- 224: lfgpp Gt-Gkt-L carav PRS7_YEAST : 253- 258: lygpp Gt-Gkt-L carav SAV_SULAC : 77- 84: yieii GqdGnsaL aqvmp SAV_SULAC : 256- 261: lygpp Gt-Gkt-L laral SAV_SULAC : 256- 262: lygpp Gt-GktlL aralr SAV_SULAC : 413- 419: aemty GytGad-L aalak SAV_SULAC : 531- 537: lfgpp Gt-GktmL akava SAV_SULAC : 689- 695: aekae GytGad-L ealvr SC18_CANAL : 320- 325: lygpp Gt-Gkt-L iarkl SC18_YEAST : 209- 216: inffk GrdGlvnL kssns SC18_YEAST : 284- 289: lygpp Gt-Gkt-L iarki SC18_YEAST : 481- 487: ktvni Gk-GatkL ntkdi SC18_YEAST : 567- 573: ihgpa Gs-GktaL aaeia SKD1_MOUSE : 177- 183: lfgpp Gt-GksyL akava SKD1_SCHPO : 172- 178: lygpp Gt-GksyL akava SUG1_DICDI : 175- 180: lygpp Gt-Gkt-L larav SUG1_DICDI : 175- 181: lygpp Gt-GktlL arava SUG1_DICDI : 336- 342: sdkmn GasGae-L kavct SUG1_XENLA : 188- 193: lygpp Gt-Gkt-L larav SUG1_XENLA : 188- 194: lygpp Gt-GktlL arava SUG1_YEAST : 192- 197: lygpp Gt-Gkt-L larav SUG1_YEAST : 192- 198: lygpp Gt-GktlL arava TBP1_HUMAN : 28- 34: eaeqd Gi-GeevL kmste TBP1_HUMAN : 230- 235: mygpp Gt-Gkt-L larac TBP1_HUMAN : 230- 236: mygpp Gt-GktlL araca TBP1_HUMAN : 262- 267: vqmfi Gd-Gak-L vrdaf TBP1_ORYSA : 220- 225: lygpp Gt-Gkt-L marac TBP1_ORYSA : 252- 257: vqmfi Gd-Gak-L vrdaf TBP1_YEAST : 225- 230: mygpp Gt-Gkt-L larac TBP1_YEAST : 225- 231: mygpp Gt-GktlL araca TBP1_YEAST : 257- 262: vqmyi Ge-Gak-L vrdaf TBP6_YEAST : 386- 392: temte GfsGsd-L tslak TBP7_YEAST : 456- 461: fhgpp Gt-Gkt-L maral TBP7_YEAST : 619- 625: afltk GygGad-L rslct TBP7_YEAST : 619- 625: afltk Gy-GgadL rslct TERA_MOUSE : 248- 253: lygpp Gt-Gkt-L iarav TERA_MOUSE : 405- 411: aneth GhvGad-L aalcs TERA_MOUSE : 521- 526: fygpp Gc-Gkt-L lakai TERA_MOUSE : 521- 527: fygpp Gc-GktlL akaia TERA_MOUSE : 681- 687: akmtn GfsGad-L teicq TERA_PIG : 248- 253: lygpp Gt-Gkt-L iarav TERA_PIG : 405- 411: aneth GhvGad-L aalcs TERA_PIG : 521- 526: fygpp Gc-Gkt-L lakai TERA_PIG : 521- 527: fygpp Gc-GktlL akaia TERA_PIG : 681- 687: akmtn GfsGad-L teicq TERA_RAT : 248- 253: lygpp Gt-Gkt-L iarav TERA_RAT : 405- 411: aneth GhvGad-L aalcs TERA_RAT : 521- 526: fygpp Gc-Gkt-L lakai TERA_RAT : 521- 527: fygpp Gc-GktlL akaia TERA_RAT : 681- 687: akmtn GfsGad-L teicq TERA_XENLA : 248- 253: lygpp Gt-Gkt-L iarav TERA_XENLA : 405- 411: aneth GhvGad-L aalcs TERA_XENLA : 521- 526: fygpp Gc-Gkt-L lakai TERA_XENLA : 521- 527: fygpp Gc-GktlL akaia TERA_XENLA : 681- 687: akmtn GfsGad-L teicq YEN7_YEAST : 648- 654: lfgpp Gt-GktmL arava YME1_SCHMA : 209- 214: lvgpp Gv-Gkt-L lakav YME1_SCHMA : 209- 215: lvgpp Gv-GktlL akavs YME1_SCHMA : 483- 489: dvlmg GrvGee-L vfgad YME1_YEAST : 324- 329: ltgpp Gt-Gkt-L larat YME1_YEAST : 324- 330: ltgpp Gt-GktlL arata YME1_YEAST : 481- 487: argtp GlsGae-L anlvn YME1_YEAST : 614- 619: dntts Gc-Gsd-L qsatg R 18: 11.5102 89( 55) A-x(2)-R-x(0,2)-R Occurences: 89(55) A26A_MYCLE : 424- 430: dmidp AilRpgR ldvki AFG2_YEAST : 398- 404: nsvdp AlrRpgR fdqev AFG2_YEAST : 668- 674: deida AllRpgR ldrhi BCS1_YEAST : 373- 379: eklda AimRpgR idykv CC48_YEAST : 25- 29: dktat AilR--R kkkdn CC48_YEAST : 366- 372: nsidp AlrRfgR fdrev CC48_YEAST : 642- 648: dqidp AilRpgR ldqli CC48_YEAST : 772- 776: rsvsd AelR--R yeays CDAT_PLAFA : 301- 307: nsidp AlrRfgR fdrei CDCH_HALSA : 341- 347: davdp AlrRpgR fdrei CDCH_HALSA : 403- 409: slske AamRalR rylpe CDCH_HALSA : 615- 621: diidp AliRsgR fdrlv FTSH_BACSU : 264- 269: ideid AvgRq-R gaglg FTSH_BACSU : 315- 321: dildp AllRpgR fdrqi FTSH_ECOLI : 255- 260: ideid AvgRq-R gaglg FTSH_ECOLI : 306- 312: dvldp AllRpgR fdrqv FTSH_HAEIN : 51- 57: dvldp AltRpgR fdrqv FTSH_LACLA : 296- 301: ideid AvgRq-R gaglg FTSH_LACLA : 348- 354: dvldp AllRpgR fdrkv LET1_SCHPO : 50- 56: rngln ArvRllR eeiql LET1_SCHPO : 301- 307: dildp AllRpgR idrki MEI1_CAEEL : 125- 130: kgvga AgpRp-R eisks MEI1_CAEEL : 348- 352: welde AlrR--R fekri MSP1_YEAST : 244- 248: ndidd AflR--R lpkrf NSF_CRIGR : 382- 388: dlide AllRpgR levkm NSF_DROME : 300- 304: vgese AnvR--R lfaea NSF_DROME : 382- 388: dmide AllRpgR levqm NSF_HUMAN : 382- 388: dlide AllRpgR levkm NSF_MOUSE : 382- 388: dlide AllRpgR levkm PAS1_PICPA : 50- 54: vphqr AaqR--R iaycg PAS1_PICPA : 210- 214: sstst AtgR--R svtnn PAS1_PICPA : 951- 957: dlids AllRpgR ldksv PAS1_YEAST : 849- 855: dlids AllRpgR ldksv PAS5_PICPA : 975- 981: dllde AllRpgR fdkml PAS8_YEAST : 811- 815: igese AnvR--R vfqka PAS8_YEAST : 886- 892: dllde AllRpgR fdkll PAS8_YEAST : 954- 960: damln AmsRiaR mvekk PAY4_YARLI : 799- 803: igese AnvR--R vfqka PAY4_YARLI : 825- 829: eldsv ApqR--R nqgds PAY4_YARLI : 875- 881: dllde AllRpgR fdkml PAY4_YARLI : 903- 909: qtime AltRkfR laadv PRS4_HUMAN : 340- 346: etldp AliRpgR idrki PRS4_ORYSA : 37- 43: fepsa ApsRvgR kqrkq PRS4_ORYSA : 89- 94: eefva AqeRl-R ptedk PRS4_ORYSA : 348- 354: esldp AllRpgR idrki PRS4_SCHPO : 347- 353: sdldp AliRpgR idrki PRS4_YEAST : 337- 343: etldp AliRpgR idrki PRS6_CAEEL : 316- 322: dtldp AllRpgR ldrki PRS6_DICDI : 305- 311: dtldp AllRpgR ldrki PRS6_HUMAN : 320- 326: dtldp AllRpgR ldrki PRS6_MANSE : 317- 323: dtldp AllRpgR ldrki PRS6_YEAST : 327- 333: dtldp AllRpgR ldrki PRS6_YEAST : 390- 396: aimqe AglRavR knryv PRS7_HUMAN : 330- 336: dtldp AlmRpgR ldrki PRS7_MOUSE : 330- 336: dtldp AlmRpgR ldrki PRS7_XENLA : 330- 336: dtldp AlmRpgR ldrki PRS7_YEAST : 364- 370: ntldp AllRpgR idrkv SAV_SULAC : 364- 370: daidp AlrRpgR fdrei SAV_SULAC : 640- 646: dildp AllRpgR fdrli SC18_CANAL : 440- 446: dlidt AllRpgR feiqi SC18_YEAST : 403- 409: dlids AllRpgR fevqv SKD1_MOUSE : 287- 291: wvlds AirR--R fekri SKD1_SCHPO : 281- 285: wtlds AirR--R fekri SKD1_SCHPO : 297- 302: iplpn AhaRa-R mfeln SUG1_DICDI : 287- 293: dildp AllRpgR idrki SUG1_XENLA : 49- 55: rneln AkvRllR eelql SUG1_XENLA : 299- 305: dilds AllRpgR idrki SUG1_YEAST : 303- 309: dildp AllRpgR idrki TBP1_HUMAN : 341- 347: dildp AllRsgR ldrki TBP1_ORYSA : 331- 337: dildp AlmRsgR ldrki TBP1_YEAST : 336- 342: dvldp AllRsgR ldrki TBP6_YEAST : 338- 342: waidd AarR--R fsrkl TBP6_YEAST : 339- 345: aidda ArrRfsR klyip TBP7_YEAST : 199- 203: krlkr AnsR--R trssr TBP7_YEAST : 199- 205: krlkr AnsRrtR ssrhp TBP7_YEAST : 569- 575: davdp AlrRpgR fdref TERA_MOUSE : 356- 362: nsidp AlrRfgR fdrev TERA_MOUSE : 632- 638: diidp AilRpgR ldqli TERA_PIG : 356- 362: nsidp AlrRfgR fdrev TERA_PIG : 632- 638: diidp AilRpgR ldqli TERA_RAT : 356- 362: nsidp AlrRfgR fdrev TERA_RAT : 632- 638: diidp AilRpgR ldqli TERA_XENLA : 356- 362: nsidp AlrRfgR fdrev TERA_XENLA : 632- 638: diidp AilRpgR ldqli YEN7_YEAST : 777- 781: wside AarR--R fvrrq YEN7_YEAST : 778- 784: sidea ArrRfvR rqyip YME1_SCHMA : 318- 324: evldk AllRpgR fdvqi YME1_YEAST : 159- 165: elyme AlqRigR hsead YME1_YEAST : 367- 372: irdlf AqaRs-R apaii YME1_YEAST : 432- 438: ealdk AltRpgR fdkvv S 19: 11.5102 97( 55) D-x(0,1)-A-x(0,1)-L Occurences: 97(55) A26A_MYCLE : 22- 26: gmssg DiAeL eqlrr A26A_MYCLE : 422- 426: redmi DpAiL rpgrl AFG2_YEAST : 396- 399: rpnsv DpA-L rrpgr AFG2_YEAST : 619- 621: ffdei D-A-L spdrd AFG2_YEAST : 666- 669: rpdei DaA-L lrpgr AFG2_YEAST : 666- 669: rpdei D-AaL lrpgr AFG2_YEAST : 666- 670: rpdei DaAlL rpgrl BCS1_YEAST : 193- 196: lneak DiA-L ktteg BCS1_YEAST : 441- 443: kdaph D-A-L kmvss CC48_YEAST : 364- 367: rpnsi DpA-L rrfgr CC48_YEAST : 420- 424: gyvga DiAsL cseaa CC48_YEAST : 640- 644: rpdqi DpAiL rpgrl CC48_YEAST : 771- 774: krsvs D-AeL rryea CC48_YEAST : 798- 801: nfnfn D-ApL gttat CDAT_PLAFA : 299- 302: rpnsi DpA-L rrfgr CDAT_PLAFA : 355- 359: gyvga DlAqL cfeaa CDCH_HALSA : 339- 342: rvdav DpA-L rrpgr CDCH_HALSA : 613- 616: rpdii DpA-L irsgr FTSH_BACSU : 313- 316: radil DpA-L lrpgr FTSH_BACSU : 313- 317: radil DpAlL rpgrf FTSH_ECOLI : 304- 307: rpdvl DpA-L lrpgr FTSH_ECOLI : 304- 308: rpdvl DpAlL rpgrf FTSH_ECOLI : 360- 364: gfsga DlAnL vneaa FTSH_ECOLI : 576- 578: lhamk D-A-L mkyet FTSH_HAEIN : 49- 52: rpdvl DpA-L trpgr FTSH_HAEIN : 105- 109: gysga DlAnL vneaa FTSH_HAEIN : 321- 323: lhamk D-A-L vkyet FTSH_LACLA : 346- 349: rsdvl DpA-L lrpgr FTSH_LACLA : 346- 350: rsdvl DpAlL rpgrf LET1_SCHPO : 26- 29: tqkiq D-AeL ailqk LET1_SCHPO : 299- 302: ridil DpA-L lrpgr LET1_SCHPO : 299- 303: ridil DpAlL rpgri MEI1_CAEEL : 346- 349: ipwel DeA-L rrrfe MSP1_YEAST : 242- 246: rindi DdAfL rrlpk MSP1_YEAST : 243- 246: indid D-AfL rrlpk NSF_CRIGR : 380- 383: rpdli DeA-L lrpgr NSF_CRIGR : 380- 384: rpdli DeAlL rpgrl NSF_DROME : 380- 383: rrdmi DeA-L lrpgr NSF_DROME : 380- 384: rrdmi DeAlL rpgrl NSF_HUMAN : 380- 383: rpdli DeA-L lrpgr NSF_HUMAN : 380- 384: rpdli DeAlL rpgrl NSF_MOUSE : 380- 383: rpdli DeA-L lrpgr NSF_MOUSE : 380- 384: rpdli DeAlL rpgrl PAS1_PICPA : 775- 778: qkdnf DsA-L sgyip PAS1_PICPA : 949- 952: rpdli DsA-L lrpgr PAS1_PICPA : 949- 953: rpdli DsAlL rpgrl PAS1_YEAST : 237- 241: vvyis DgAqL psqkg PAS1_YEAST : 847- 850: rpdli DsA-L lrpgr PAS1_YEAST : 847- 851: rpdli DsAlL rpgrl PAS5_PICPA : 973- 976: rpdll DeA-L lrpgr PAS5_PICPA : 973- 977: rpdll DeAlL rpgrf PAS5_PICPA : 1038- 1041: yalcs D-AmL namtr PAS8_YEAST : 884- 887: rpdll DeA-L lrpgr PAS8_YEAST : 884- 888: rpdll DeAlL rpgrf PAS8_YEAST : 949- 952: yalcs D-AmL namsr PAY4_YARLI : 873- 876: rpdll DeA-L lrpgr PAY4_YARLI : 873- 877: rpdll DeAlL rpgrf PAY4_YARLI : 938- 941: yalcs D-AmL namtr PRS4_HUMAN : 338- 341: rietl DpA-L irpgr PRS4_ORYSA : 346- 349: riesl DpA-L lrpgr PRS4_ORYSA : 346- 350: riesl DpAlL rpgri PRS4_SCHPO : 345- 348: risdl DpA-L irpgr PRS4_YEAST : 335- 338: kietl DpA-L irpgr PRS6_CAEEL : 314- 317: rqdtl DpA-L lrpgr PRS6_CAEEL : 314- 318: rqdtl DpAlL rpgrl PRS6_DICDI : 303- 306: rqdtl DpA-L lrpgr PRS6_DICDI : 303- 307: rqdtl DpAlL rpgrl PRS6_HUMAN : 318- 321: radtl DpA-L lrpgr PRS6_HUMAN : 318- 322: radtl DpAlL rpgrl PRS6_MANSE : 315- 318: radtl DpA-L lrpgr PRS6_MANSE : 315- 319: radtl DpAlL rpgrl PRS6_YEAST : 325- 328: radtl DpA-L lrpgr PRS6_YEAST : 325- 329: radtl DpAlL rpgrl PRS7_HUMAN : 29- 32: aldeg DiA-L lktyg PRS7_HUMAN : 29- 33: aldeg DiAlL ktygq PRS7_HUMAN : 328- 331: rpdtl DpA-L mrpgr PRS7_MOUSE : 29- 32: aldeg DiA-L lktya PRS7_MOUSE : 29- 33: aldeg DiAlL ktyaq PRS7_MOUSE : 328- 331: rpdtl DpA-L mrpgr PRS7_XENLA : 29- 32: sldeg DiA-L lktyg PRS7_XENLA : 29- 33: sldeg DiAlL ktygq PRS7_XENLA : 328- 331: rpdtl DpA-L mrpgr PRS7_YEAST : 362- 365: rpntl DpA-L lrpgr PRS7_YEAST : 362- 366: rpntl DpAlL rpgri SAV_SULAC : 362- 365: rpdai DpA-L rrpgr SAV_SULAC : 418- 422: gytga DlAaL akeaa SAV_SULAC : 638- 641: rpdil DpA-L lrpgr SAV_SULAC : 638- 642: rpdil DpAlL rpgrf SC18_CANAL : 438- 441: rldli DtA-L lrpgr SC18_CANAL : 438- 442: rldli DtAlL rpgrf SC18_YEAST : 401- 404: rkdli DsA-L lrpgr SC18_YEAST : 401- 405: rkdli DsAlL rpgrf SC18_YEAST : 491- 495: klntk DiAkL kvtre SKD1_MOUSE : 135- 139: nvkws DvAgL egake SKD1_MOUSE : 347- 349: siivr D-A-L mqpvr SKD1_SCHPO : 130- 134: nvrwd DiAgL enake SUG1_DICDI : 86- 90: idptv DiAkL tpstr SUG1_DICDI : 285- 288: ridil DpA-L lrpgr SUG1_DICDI : 285- 289: ridil DpAlL rpgri SUG1_XENLA : 297- 300: ridil DsA-L lrpgr SUG1_XENLA : 297- 301: ridil DsAlL rpgri SUG1_YEAST : 301- 304: rldil DpA-L lrpgr SUG1_YEAST : 301- 305: rldil DpAlL rpgri TBP1_HUMAN : 263- 267: qmfig DgAkL vrdaf TBP1_HUMAN : 339- 342: rvdil DpA-L lrsgr TBP1_HUMAN : 339- 343: rvdil DpAlL rsgrl TBP1_ORYSA : 253- 257: qmfig DgAkL vrdaf TBP1_ORYSA : 329- 332: radil DpA-L mrsgr TBP1_YEAST : 334- 337: rvdvl DpA-L lrsgr TBP1_YEAST : 334- 338: rvdvl DpAlL rsgrl TBP6_YEAST : 176- 180: kvywe DiAgL rnakn TBP7_YEAST : 567- 570: rpdav DpA-L rrpgr TBP7_YEAST : 801- 805: nvqnl DlAsL vsess TBP7_YEAST : 1002- 1006: rkppi DdAfL vhlfe TBP7_YEAST : 1003- 1006: kppid D-AfL vhlfe TERA_MOUSE : 354- 357: rpnsi DpA-L rrfgr TERA_MOUSE : 410- 414: ghvga DlAaL cseaa TERA_MOUSE : 630- 634: rpdii DpAiL rpgrl TERA_PIG : 354- 357: rpnsi DpA-L rrfgr TERA_PIG : 410- 414: ghvga DlAaL cseaa TERA_PIG : 630- 634: rpdii DpAiL rpgrl TERA_RAT : 354- 357: rpnsi DpA-L rrfgr TERA_RAT : 410- 414: ghvga DlAaL cseaa TERA_RAT : 630- 634: rpdii DpAiL rpgrl TERA_XENLA : 354- 357: rpnsi DpA-L rrfgr TERA_XENLA : 410- 414: ghvga DlAaL cseaa TERA_XENLA : 630- 634: rpdii DpAiL rpgrl YEN7_YEAST : 606- 610: evhwd DiAgL esaky YME1_SCHMA : 316- 319: qaevl DkA-L lrpgr YME1_SCHMA : 316- 320: qaevl DkAlL rpgrf YME1_YEAST : 430- 433: fpeal DkA-L trpgr T 20: 11.5102 126( 55) D-x(1,2)-D-x(4,5)-R Occurences: 126(55) A26A_MYCLE : 371- 380: vivff DemDsifrtR gtgvs A26A_MYCLE : 419- 427: asnre DmiDpail-R pgrld AFG2_YEAST : 345- 354: siifi DeiDsiapnR andds AFG2_YEAST : 616- 625: siiff DeiDalspdR dgsst AFG2_YEAST : 663- 671: atnrp DeiDaall-R pgrld BCS1_YEAST : 320- 328: illle Di-DaafnkR sqtge CC48_YEAST : 314- 323: aiifi DeiDsiapkR dktng CC48_YEAST : 587- 596: tvvfl DelDsiakaR ggslg CC48_YEAST : 637- 645: atnrp DqiDpail-R pgrld CDAT_PLAFA : 249- 258: ciifi DeiDsiankR sksnn CDAT_PLAFA : 507- 515: kknpn DklDkner-R ipayi CDAT_PLAFA : 656- 665: ciiff DeiDslakeR nsntn CDCH_HALSA : 289- 298: siifi DelDsiapkR edvtg CDCH_HALSA : 336- 344: atnrv DavDpalr-R pgrfd CDCH_HALSA : 562- 571: tviff DelDslapgR gqtgg CDCH_HALSA : 610- 618: atnrp DiiDpali-R sgrfd FTSH_BACSU : 260- 269: clifi DeiDavgrqR gaglg FTSH_BACSU : 310- 318: atnra DilDpall-R pgrfd FTSH_BACSU : 393- 400: kidar Di-Deatd-R viagp FTSH_ECOLI : 251- 260: ciifi DeiDavgrqR gaglg FTSH_ECOLI : 301- 309: atnrp DvlDpall-R pgrfd FTSH_ECOLI : 343- 351: vplap Di-DaaiiaR gtpgf FTSH_HAEIN : 46- 54: atnrp DvlDpalt-R pgrfd FTSH_HAEIN : 88- 96: vsvaq Dv-DamtlaR gtpgy FTSH_LACLA : 292- 301: siifi DeiDavgrqR gaglg FTSH_LACLA : 343- 351: atnrs DvlDpall-R pgrfd FTSH_LACLA : 426- 433: einaa Di-Degmd-R amagp LET1_SCHPO : 245- 254: siifm DeiDsigssR sdssg LET1_SCHPO : 296- 304: atnri DilDpall-R pgrid MEI1_CAEEL : 292- 301: siifi DeiDtlggqR gnsge MSP1_YEAST : 192- 201: ciifi DeiDsflreR sstdh MSP1_YEAST : 240- 247: tnrin Di-Ddafl-R rlpkr MSP1_YEAST : 240- 248: tnrin DidDaflr-R lpkrf MSP1_YEAST : 240- 248: tnrin Di-DdaflrR lpkrf NSF_CRIGR : 328- 337: hiiif DeiDaickqR gsmag NSF_CRIGR : 377- 385: mtnrp DliDeall-R pgrle NSF_DROME : 328- 337: hiiif DeiDaickqR gsvag NSF_DROME : 377- 385: mtnrr DmiDeall-R pgrle NSF_HUMAN : 328- 337: hiiif DeiDaickqR gsmag NSF_HUMAN : 377- 385: mtnrp DliDeall-R pgrle NSF_MOUSE : 328- 337: hiiif DeiDaickqR gsmag NSF_MOUSE : 377- 385: mtnrp DliDeall-R pgrle PAS1_PICPA : 899- 908: cilff DefDsiapkR ghdst PAS1_PICPA : 946- 954: atsrp DliDsall-R pgrld PAS1_YEAST : 661- 668: lqler Dc-Dnvvt-R elfsk PAS1_YEAST : 797- 806: cilff DefDsiapkR ghdst PAS1_YEAST : 844- 852: atsrp DliDsall-R pgrld PAS5_PICPA : 918- 927: cvvff DelDsvapkR gnqgd PAS5_PICPA : 970- 978: atnrp DllDeall-R pgrfd PAS8_YEAST : 831- 840: cviff DeiDsvapkR gnqgd PAS8_YEAST : 881- 889: atnrp DllDeall-R pgrfd PAY4_YARLI : 124- 131: lepql Dk-Drpvi-R qgdvl PAY4_YARLI : 216- 224: ptpls DrfDdces-R gfvks PAY4_YARLI : 693- 702: qltps DfdDaiadaR qkysd PAY4_YARLI : 819- 828: cvvff DelDsvapqR rnqgd PAY4_YARLI : 870- 878: atnrp DllDeall-R pgrfd PRS4_HUMAN : 285- 294: sivfi DeiDaigtkR ydsns PRS4_ORYSA : 293- 302: sivfi DeiDavgtkR ydahs PRS4_SCHPO : 291- 300: sivfi DeiDaigtkR ydaqs PRS4_SCHPO : 343- 350: tnris Dl-Dpali-R pgrid PRS4_YEAST : 282- 291: sivfi DeiDaigtkR ydsns PRS6_CAEEL : 261- 270: siifi DeiDaiatkR fdaqt PRS6_CAEEL : 311- 319: atnrq DtlDpall-R pgrld PRS6_DICDI : 250- 259: aiifi DeiDaiatkR fdaqt PRS6_DICDI : 300- 308: atnrq DtlDpall-R pgrld PRS6_HUMAN : 265- 274: aiifi DeiDaiatkR fdaqt PRS6_HUMAN : 315- 323: atnra DtlDpall-R pgrld PRS6_MANSE : 262- 271: aiifi DeiDaiatkR fdaqt PRS6_MANSE : 312- 320: atnra DtlDpall-R pgrld PRS6_YEAST : 272- 281: siifi DevDsiatkR fdaqt PRS6_YEAST : 322- 330: atnra DtlDpall-R pgrld PRS6_YEAST : 367- 374: lapea Dl-Dslii-R ndsls PRS7_HUMAN : 15- 23: rktke DekDdkpi-R aldeg PRS7_HUMAN : 275- 284: cliff DeiDaiggaR fddga PRS7_HUMAN : 325- 333: atnrp DtlDpalm-R pgrld PRS7_MOUSE : 275- 284: cliff DemDaiggaR fddga PRS7_MOUSE : 325- 333: atnrp DtlDpalm-R pgrld PRS7_XENLA : 275- 284: cliff DeiDaiggaR fddga PRS7_XENLA : 325- 333: atnrp DtlDpalm-R pgrld PRS7_YEAST : 309- 318: ciiff DeiDavggaR fddga SAV_SULAC : 312- 321: siifi DeiDaiapkR edvtg SAV_SULAC : 359- 367: atnrp DaiDpalr-R pgrfd SAV_SULAC : 587- 596: tviff DeiDsiapiR glstd SAV_SULAC : 635- 643: atnrp DilDpall-R pgrfd SC18_CANAL : 385- 394: hviif DelDsvfkqR gsgks SC18_CANAL : 435- 443: mtnrl DliDtall-R pgrfe SC18_YEAST : 118- 126: ylgsi Di-DisfraR gkavs SC18_YEAST : 349- 358: hiiif DelDsvfkqR gsrgd SC18_YEAST : 398- 406: mtnrk DliDsall-R pgrfe SKD1_MOUSE : 234- 243: siifi DeiDslcgsR senes SKD1_SCHPO : 105- 112: aneal Ds-Dakkl-R salts SKD1_SCHPO : 228- 237: siifi DeiDslcgsR seges SUG1_DICDI : 231- 240: siifm DeiDsigssR gesgs SUG1_DICDI : 282- 290: ctnri DilDpall-R pgrid SUG1_XENLA : 99- 108: vdkni DinDvtpncR valrn SUG1_XENLA : 244- 252: siifm DeiDsigs-R gsegg SUG1_XENLA : 294- 302: atnri DilDsall-R pgrid SUG1_YEAST : 248- 257: siifm DeiDsigstR vegsg SUG1_YEAST : 298- 306: atnrl DilDpall-R pgrid TBP1_HUMAN : 286- 295: siifi DelDaigtkR fdsek TBP1_HUMAN : 336- 344: atnrv DilDpall-R sgrld TBP1_ORYSA : 276- 285: ciifi DeiDaigtkR fdsev TBP1_ORYSA : 326- 334: atnra DilDpalm-R sgrld TBP1_YEAST : 281- 290: tiifi DelDaigtkR fdsek TBP1_YEAST : 331- 339: atnrv DvlDpall-R sgrld TBP6_YEAST : 274- 283: siifi DeiDsmltaR sdnen TBP7_YEAST : 149- 157: edeyl De-DskdnnR rrraa TBP7_YEAST : 151- 159: eylde DskDnnrr-R raadr TBP7_YEAST : 151- 160: eylde DskDnnrrrR aadrk TBP7_YEAST : 178- 186: ddeey DedDeegd-R ishsa TBP7_YEAST : 178- 186: ddeey De-DdeegdR ishsa TBP7_YEAST : 517- 526: siiff DeiDglapvR sskqe TBP7_YEAST : 564- 572: atnrp DavDpalr-R pgrfd TBP7_YEAST : 1044- 1051: kffnm Dl-Divee-R lwngy TERA_MOUSE : 304- 313: aiifi DelDaiapkR ekthg TERA_MOUSE : 577- 586: cvlff DelDsiakaR ggnig TERA_MOUSE : 627- 635: atnrp DiiDpail-R pgrld TERA_PIG : 304- 313: aiifi DelDaiapkR ekthg TERA_PIG : 577- 586: cvlff DelDsiakaR ggnig TERA_PIG : 627- 635: atnrp DiiDpail-R pgrld TERA_RAT : 304- 313: aiifi DelDaiapkR ekthg TERA_RAT : 577- 586: cvlff DelDsiakaR ggnig TERA_RAT : 627- 635: atnrp DiiDpail-R pgrld TERA_XENLA : 304- 313: aiifi DelDaiapkR ekthg TERA_XENLA : 577- 586: cvlff DelDsiakaR ggnig TERA_XENLA : 627- 635: atnrp DiiDpail-R pgrld YEN7_YEAST : 704- 713: siifv DeiDsimgsR nnene YME1_SCHMA : 265- 274: clvfi DeiDsvggnR tfsph YME1_YEAST : 380- 389: aiifi DelDaiggkR npkdq YME1_YEAST : 468- 477: kitla DnvDptiiaR gtpgl Number of patterns evaluated by Pratt:4470 Total running time: 44 seconds