multiple alignment of four small prosite families

<title>multiple alignment of four small prosite families</title>
<h1> multiple alignment of four small prosite families</h1>
<pre>
CLUSTAL W(1.5) multiple sequence alignment


STP1_BOVIN      ---------------------------------STSRKLK-----------SQGMR----
STP1_HUMAN      ---------------------------------STSRKLK-----------SHGMR----
STP1_MOUSE      ---------------------------------STSRKLK-----------THGMR----
STP1_PIG1       ---------------------------------STSRKLK-----------SHGMR----
STP1_RAT1       ---------------------------------STSRKLK-----------THGMR----
STP1_SHEEP      ---------------------------------STSRKLK-----------SQGTR----
STP2_BOVIN      -------------MDTKTQSLP----NTHAQPHSNSRPQSHAC---HHCSCSQHCQ----
STP2_HUMAN      -------------MDTQTHSLP----ITHTQLHSNSQPQ--------SRTCTRHCQTFSQ
STP2_MOUSE      -------------MDTKMQSLP----TTHPHPHSSSRPQSHTSNQCNQCTCSHHCR----
STP2_PIG2       -------------MDTKTQSLP----NAHTQPHSNSGPQSHAC---NQCSCSHHCQNCSQ
STP2_RAT2       -----------MGGHTRRGRAP----TTHPHPHSSSRPQSHTN---NQCACSHHCR----
SAR1_ARATH      -----MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTT----------LLHMLKD---
SAR1_SCHPO      -----MFIINWFYDALAMLGLVNKHAKMLFLGLDNAGKTT----------LLHMLKN---
SAR1_YEAST      --MAGWDIFGWFRDVLASLGLWNKHGKLLFLGLDNAGKTT----------LLHMLKN---
SARA_MOUSE      MSFIFEWIYNGFSSVLQFLGLYKKSGKLVFLGLDNAGKTT----------LLQMLKD---
LSPA_ECOLI      --------MSQSICSTGLRWLW---LVVVVLIIDLGSKYL----------ILQNFAL---
LSPA_ENTAE      --------MSKSICSTGLRWLW---VVVAVLIIDLGSKFL----------ILQNFAL---
LSPA_PSEFL      ----------MPNADSRFGRLGWLVLSLLVLVIDQVSKAHFEG-------SLEMFQ----
LSPA_STAAU      -------------MHKKYFIGTSILIAVFVVIFDQVTKYIIA--------TTMKIG----
                                                                            

STP1_BOVIN      -----------RGKNRTP--------------H-KG--------------------VK--
STP1_HUMAN      -----------RSKSRSP--------------H-KG--------------------VK--
STP1_MOUSE      -----------RGKNRAP--------------H-KG--------------------VK--
STP1_PIG1       -----------RGKNRAP--------------H-KG--------------------VK--
STP1_RAT1       -----------RGKNRAP--------------H-KG--------------------VK--
STP1_SHEEP      -----------RGKNRTP--------------H-KG--------------------VK--
STP2_BOVIN      SRSRSRSC-RSRSSSRRPRSHRSPT------GH-QGRAR-PQPSS---EAPQTHHALPPV
STP2_HUMAN      SCRQSHRGSRSQSSSQSPASHRNPTGAHSSSGH-QSQSPNTSPPPKRHKKTMNSHHSP--
STP2_MOUSE      SCSQAGHA----GSSSSPS---------------------PGPPMKHPKPSVHSRHSP--
STP2_PIG2       SCDRSQSCSRSRSSSQSPTGHRSLP------GH-QSQSLSPSPSPRHRKRAMHSHRCP--
STP2_RAT2       SCSQAGHP----SSSSSPS---------------------PGPPTKHPKTPMHSRYSP--
SAR1_ARATH      ERLVQHQPTQHPTSEELSIGKIKFKAF-DLGGHQIARRVWKDYYAKVDAVVYLVDAYDK-
SAR1_SCHPO      DRLAVMQPTLHPTSEELAIGNVRFTTF-DLGGHQQARRLWRDYFPEVNGIVYLVDCCDF-
SAR1_YEAST      DRLATLQPTWHPTSEELAIGNIKFTTF-DLGGHIQARRLWKDYFPEVNGIVFLVDAADP-
SARA_MOUSE      DRLGQHVPTLHPTSEELTIAGMTFTTF-DLGGHEQARRVWKNYLPAINGIVFLVDCADH-
LSPA_ECOLI      GDTVPLFPSLNLHYARNYGAAFSFLA--DSGG--WQR--W--FFAGIAIGISVILAVMM-
LSPA_ENTAE      GETVSLFPSLNLHYARNYGAAFSFLA--DSGG--WQR--W--FFAGIAVGICVVLAVLM-
LSPA_PSEFL      -QIVVIPDYFSWTLAYNTGAAFSFLAD----GGGWQRWLFAVIAVVVSAVLVVWLKRLG-
LSPA_STAAU      DSFEVIPHFLNITSHRNN-------------GAAWGILSGKMTFFFIITIIILIALVYFF
                                                                            

STP1_BOVIN      --RS---------------GSK-RKYRKSSLKSRK---RCDDANR---------------
STP1_HUMAN      --RG---------------GSK-RKYRKGNLKSRK---RGDDANR---------------
STP1_MOUSE      --RG---------------GSK-RKYRKSVLKSRK---RGDDASR---------------
STP1_PIG1       --RG---------------GSK-RKYRKGSLKSRK---RCDDANR---------------
STP1_RAT1       --RG---------------GSK-RKYRKSSLKSRK---RGDDASR---------------
STP1_SHEEP      --RG---------------CSK-RKYRKSSLKSRK---RCDDANR---------------
STP2_BOVIN      SSRPVTHSC---------SHSKNRKNLEGKVIKRKQVKRSKQVYKR--------------
STP2_HUMAN      -MRPTILHC---------RCPKNRKNLEGKLKKKKMAKRIQQVYKT--------------
STP2_MOUSE      -ARP-SHRG---------SCPKNRKTFEGKVSKRKAVRRRKRTHRA--------------
STP2_PIG2       -SRPGTRSC---------SHSKKRKNVEGKANKRKGIKRSQQVYKT--------------
STP2_RAT2       -SRP-SHRG---------SCPKNRKTLEGKVSKRKAVRRRKRTHRA--------------
SAR1_ARATH      -ERFAESKRELDALLSDEALATVPFLILGNKIDIPY-AASEDELRYHLGLTNFTTGKGKV
SAR1_SCHPO      -ERLSESKAELDALLAMEELARVPFLILGNKIDAPG-AISEDELKAALGLYQTTGKG--V
SAR1_YEAST      -ERFDEARVELDALFNIAELKDVPFVILGNKIDAPN-AVSEAELRSALGLLNTTG-----
SARA_MOUSE      -SRLMESKVELNALMTDETISNVPILILGNKIDRTD-AISEEKLREIKGLYGQTTGKGNV
LSPA_ECOLI      -YRSKATQK-----LNNIAYALIIGGALGNLFDRLWHGFVVDMIDFYVGDWHFAT----F
LSPA_ENTAE      -YRSKATQK-----LNNIAYALIIGGALGNLFDRLWHGFVVDMIDFYVGDWHFAT----F
LSPA_PSEFL      --RDD--------TWLAIALALVLGGALGNLYDRIALGHVIDFILVHWQNRHYFPAFNFA
LSPA_STAAU      IKDAQYN------LFMQVAISLLFAGALGNFIDRILTGEVVDFIDTNIFGYDFPIFNIAD
                                                                            

STP1_BOVIN      ------------------NLRSHL------------
STP1_HUMAN      ------------------NYRSHL------------
STP1_MOUSE      ------------------NYRSHL------------
STP1_PIG1       ------------------NYRSHL------------
STP1_RAT1       ------------------NYRSHL------------
STP1_SHEEP      ------------------NFRSHL------------
STP2_BOVIN      ------------------KRQSSGRKYN--------
STP2_HUMAN      ------------------KTRSSGWKSN--------
STP2_MOUSE      ------------------KRRTSGRRYK--------
STP2_PIG2       ------------------KRRSSGRKYN--------
STP2_RAT2       ------------------KRRSSGRRYK--------
SAR1_ARATH      TLGDSGVRPLEVFMCSIVRKMGYGEGFKWLSQYIN-
SAR1_SCHPO      SKPVPGIRPIEVFMCSVVLRQGYGEGFKWLAQYV--
SAR1_YEAST      SQRIEGQRPVEVFMCSVVMRNGYLEAFQWLSQYI--
SARA_MOUSE      TLKELNARPMEVFMCSVLKRQGYGEGFRWLSQYID-
LSPA_ECOLI      NLADTAI-------C-VGAALIVLEGFLPSRAKKQ-
LSPA_ENTAE      NLADSAI-------C-IGAALIVLEGFLPSSDKKTS
LSPA_PSEFL      DSAITVG--AIMLALDMFKSKKTGETVND-------
LSPA_STAAU      SSLTIG--------VILIIIALLKDTSNKKDKEVK-
                                                    
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